BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= P09457 (212 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 6CP3-Y nrPDB 387 e-108 5LQX-U nrPDB 210 4e-55 2WSS-S nrPDB 113 6e-26 6N30-I nrPDB 76 9e-15 2JMX-A nrPDB 64 3e-11 6FKI-d nrPDB 59 1e-09 5T4Q-L nrPDB 49 1e-06 5DN6-H nrPDB 46 1e-05 3LA7-A nrPDB 35 0.029 1ABV-A nrPDB 33 0.063 4X0Q-A nrPDB 29 1.7 1QU7-A nrPDB 27 6.2 4KVK-A nrPDB 27 7.0 1TXO-A nrPDB 27 7.5 3ZX6-A nrPDB 27 7.7 1FOE-A nrPDB 27 7.8 >6CP3-Y nrPDB Length = 195 Score = 387 bits (995), Expect = e-108, Method: Compositional matrix adjust. Identities = 195/195 (100%), Positives = 195/195 (100%) Query: 18 ASKAAAPPPVRLFGVEGTYATALYQAAAKNSSIDAAFQSLQKVESTVKKNPKLGHLLLNP 77 ASKAAAPPPVRLFGVEGTYATALYQAAAKNSSIDAAFQSLQKVESTVKKNPKLGHLLLNP Sbjct: 1 ASKAAAPPPVRLFGVEGTYATALYQAAAKNSSIDAAFQSLQKVESTVKKNPKLGHLLLNP 60 Query: 78 ALSLKDRNSVIDAIVETHKNLDGYVVNLLKVLSENNRLGCFEKIASDFGVLNDAHNGLLK 137 ALSLKDRNSVIDAIVETHKNLDGYVVNLLKVLSENNRLGCFEKIASDFGVLNDAHNGLLK Sbjct: 61 ALSLKDRNSVIDAIVETHKNLDGYVVNLLKVLSENNRLGCFEKIASDFGVLNDAHNGLLK 120 Query: 138 GTVTSAEPLDPKSFKRIEKALSASKLVGQGKSLKLENVVKPEIKGGLIVELGDKTVDLSI 197 GTVTSAEPLDPKSFKRIEKALSASKLVGQGKSLKLENVVKPEIKGGLIVELGDKTVDLSI Sbjct: 121 GTVTSAEPLDPKSFKRIEKALSASKLVGQGKSLKLENVVKPEIKGGLIVELGDKTVDLSI 180 Query: 198 STKIQKLNKVLEDSI 212 STKIQKLNKVLEDSI Sbjct: 181 STKIQKLNKVLEDSI 195 >5LQX-U nrPDB Length = 194 Score = 210 bits (534), Expect = 4e-55, Method: Compositional matrix adjust. Identities = 107/195 (54%), Positives = 146/195 (74%), Gaps = 1/195 (0%) Query: 18 ASKAAAPPPVRLFGVEGTYATALYQAAAKNSSIDAAFQSLQKVESTVKKNPKLGHLLLNP 77 AS A PPV+LFG++GTYATAL+ A+AK+SSI+ FQS+QK+ ST+ K+ K+ +L NP Sbjct: 1 ASAAPIKPPVQLFGLDGTYATALFSASAKDSSIEKTFQSVQKLSSTISKDAKVAQVLSNP 60 Query: 78 ALSLKDRNSVIDAIVETHKNLDGYVVNLLKVLSENNRLGCFEKIASDFGVLNDAHNGLLK 137 ALSL R V+ + + K L+ V NLL VL+ENNRL F+ IA F VLNDA+NG+++ Sbjct: 61 ALSLNSRKEVVSVLSKELK-LEPVVSNLLTVLAENNRLSLFDSIAKQFSVLNDAYNGVVE 119 Query: 138 GTVTSAEPLDPKSFKRIEKALSASKLVGQGKSLKLENVVKPEIKGGLIVELGDKTVDLSI 197 TV SA+PLD K R+ K+++ SK VG GK+LK++N V PEI GGLIVE+ DK+VDLS+ Sbjct: 120 ATVVSAKPLDSKILNRLTKSITNSKYVGPGKTLKIKNEVDPEILGGLIVEVADKSVDLSL 179 Query: 198 STKIQKLNKVLEDSI 212 ++K+ KLNKVL ++I Sbjct: 180 ASKVNKLNKVLSETI 194 >2WSS-S nrPDB Length = 190 Score = 113 bits (282), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 65/186 (34%), Positives = 104/186 (55%), Gaps = 4/186 (2%) Query: 25 PPVRLFGVEGTYATALYQAAAKNSSIDAAFQSLQKVESTVKKNPKLGHLLLNPALSLKDR 84 PPV+++G+EG YATALY AA+K + ++ + L +V + K PK+ LLNP + + Sbjct: 7 PPVQIYGIEGRYATALYSAASKQNKLEQVEKELLRV-GQILKEPKMAASLLNPYVKRSVK 65 Query: 85 NSVIDAIVETHKNLDGYVVNLLKVLSENNRLGCFEKIASDFGVLNDAHNGLLKGTVTSAE 144 + + K NL+ +L+EN RL + S F + H G + TVT+A Sbjct: 66 VKSLSDMTAKEK-FSPLTSNLINLLAENGRLTNTPAVISAFSTMMSVHRGEVPCTVTTAS 124 Query: 145 PLDPKSFKRIEKALSASKLVGQGKSLKLENVVKPEIKGGLIVELGDKTVDLSISTKIQKL 204 LD + ++ L + + +G+ LKLE + P I GG+IV +G+K VD+S TKIQKL Sbjct: 125 ALDETTLTELKTVLKS--FLSKGQVLKLEVKIDPSIMGGMIVRIGEKYVDMSAKTKIQKL 182 Query: 205 NKVLED 210 ++ + + Sbjct: 183 SRAMRE 188 >6N30-I nrPDB Length = 178 Score = 76.3 bits (186), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 48/173 (27%), Positives = 91/173 (52%), Gaps = 6/173 (3%) Query: 36 YATALYQAAAKNSSIDAAFQSLQKVESTVKKNPKLGHLLLNPALSLKDRNSVIDAIVETH 95 YA+AL+Q A + +D + ++ V + +N + LL P LSL + ++I E Sbjct: 10 YASALFQIALEQGQLDRIEEDVRAVRQALAENGEFLSLLSYPKLSLDQKKALI---AEAF 66 Query: 96 KNLDGYVVNLLKVLSENNRLGCFEKIASDFGVLNDAHNGLLKGTVTSAEPLDPKSFKRIE 155 + V N L +L E +R G ++A F L D G+ K SA PL + + + Sbjct: 67 AGVSTPVQNTLLLLLERHRFGLVPELAEQFLALVDDARGIAKAVAYSARPLTDEELRALS 126 Query: 156 KALSASKLVGQGKSLKLENVVKPEIKGGLIVELGDKTVDLSISTKIQKLNKVL 208 + VG+ ++L++EN++ PE+ GG+ + +G++ D S+S +++++ + L Sbjct: 127 DVFAQK--VGK-QTLEIENIIDPELIGGVRLRIGNRIYDGSVSGQLERIRRQL 176 >2JMX-A nrPDB Length = 120 Score = 64.3 bits (155), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 38/116 (32%), Positives = 60/116 (51%), Gaps = 2/116 (1%) Query: 25 PPVRLFGVEGTYATALYQAAAKNSSIDAAFQSLQKVESTVKKNPKLGHLLLNPALSLKDR 84 PPV+++G+EG YATALY AA+K + ++ + L +V + K PK+ LLNP + + Sbjct: 7 PPVQIYGIEGRYATALYSAASKQNKLEQVEKELLRV-GQILKEPKMAASLLNPYVKRSVK 65 Query: 85 NSVIDAIVETHKNLDGYVVNLLKVLSENNRLGCFEKIASDFGVLNDAHNGLLKGTV 140 + + K NL+ +L+EN RL + S F + H G + TV Sbjct: 66 VKSLSDMTAKEK-FSPLTSNLINLLAENGRLTNTPAVISAFSTMMSVHRGEVPCTV 120 >6FKI-d nrPDB Length = 257 Score = 59.3 bits (142), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 57/222 (25%), Positives = 108/222 (48%), Gaps = 23/222 (10%) Query: 6 FTRSFASS------LRA---AASKAAAPPPVRLFG---VEGT---YATALYQAAAKNSSI 50 F+ SF+SS LR ASK A P G V+ T YA+AL A ++ Sbjct: 33 FSLSFSSSTATFNPLRLKILTASKLTAKPRGGALGTRMVDSTASRYASALADVADVTGTL 92 Query: 51 DAAFQSLQKVESTVKKNPKLGHLLLNPALSLKDRNSVIDAIVETHKNLDGYVVNLLKVLS 110 +A ++K+ + P + + NP +S+ ++ SV+D I+ T L + N + +L Sbjct: 93 EATNSDVEKLIRIFSEEP-VYYFFANPVISIDNKRSVLDEIITT-SGLQPHTANFINILI 150 Query: 111 ENNRLGCFEKIASDFGVLNDAHNGLLKGTVTSAEPLDPKSFKRIEKALSASKLVGQGKSL 170 ++ R+ ++I ++F + + G VTS L+ +I K + K+ G K++ Sbjct: 151 DSERINLVKEILNEFEDVFNKITGTEVAVVTSVVKLENDHLAQIAKGV--QKITG-AKNV 207 Query: 171 KLENVVKPEIKGGLIVELGD---KTVDLSISTKIQKLNKVLE 209 +++ V+ P + G + G+ K VD+S+ +++++ LE Sbjct: 208 RIKTVIDPSLVAGFTIRYGNEGSKLVDMSVKKQLEEIAAQLE 249 >5T4Q-L nrPDB Length = 177 Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 43/174 (24%), Positives = 81/174 (46%), Gaps = 8/174 (4%) Query: 36 YATALYQAAAKNSSIDAAFQSLQKVESTVKKNPKLGHLLLNPALSLKDRNSVIDAIVETH 95 YA A + A ++ S++ +Q + + V KN ++ LL + AL+ + A+ Sbjct: 11 YAKAAFDFAVEHQSVER-WQDMLAFAAEVTKNEQMAELL-SGALAPETLAESFIAV--AG 66 Query: 96 KNLDGYVVNLLKVLSENNRLGCFEKIASDFGVLNDAHNGLLKGTVTSAEPLDPKSFKRIE 155 + LD NL++V++EN RL + F L + V SA L + +I Sbjct: 67 EQLDENGQNLIRVMAENGRLNALPDVLEQFIHLRAVSEATAEVDVISAAALSEQQLAKIS 126 Query: 156 KALSASKLVGQGKSLKLENVVKPEIKGGLIVELGDKTVDLSISTKIQKLNKVLE 209 A+ +L + +KL + + G+I+ GD +D S+ ++++L VL+ Sbjct: 127 AAME-KRL---SRKVKLNAKIDKSVMAGVIIRAGDMVIDGSVRGRLERLADVLQ 176 >5DN6-H nrPDB Length = 188 Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 47/179 (26%), Positives = 82/179 (45%), Gaps = 5/179 (2%) Query: 32 VEGTYATALYQAAAKNSSIDAAFQSLQKVESTVKKNPKLGHLLLNPALSLKDRNSVIDAI 91 + G YA AL+ + IDA + + S + L L L+P + + + + A+ Sbjct: 13 IAGRYAQALFDLVRDSGGIDALSSQIDDLASAYDASQDLRDLTLSPLYDRQQQEAAVGAL 72 Query: 92 VETHKNLDGYVVNLLKVLSENNRLGCFEKIASDFGVLNDAHNGLLKGTVTSAEPLDPKSF 151 E L + N L++L+ N RL + + L G + V SA+ L + Sbjct: 73 SE-RMGLSAELANTLRLLARNRRLFTLPQFVAKLRNLIADAKGEVTADVVSAQALTDEQK 131 Query: 152 KRIEKALSASKLVGQGKSLKLENVVKPEIKGGLIVELGDKTVDLSISTKIQKLNKVLED 210 R+ L+A GK++KL V + GG+IV+LG + +D SI +K+ L +++ Sbjct: 132 ARLADTLAAKS----GKTVKLNARVDESLIGGMIVKLGSQMIDSSIRSKLASLQNAMKE 186 >3LA7-A nrPDB Length = 243 Score = 34.7 bits (78), Expect = 0.029, Method: Compositional matrix adjust. Identities = 27/109 (24%), Positives = 53/109 (48%), Gaps = 10/109 (9%) Query: 29 LFGV----EGTYATALYQAAAKNSSIDAAFQSLQKVESTVKKNPKLGHLLLNPALSLKDR 84 +FGV G + Y A A + ++ +++VE +K+NP+L L+L L R Sbjct: 94 VFGVLSLLTGNKSDRFYHAVA-FTPVELLSAPIEQVEQALKENPELSMLMLR---GLSSR 149 Query: 85 NSVIDAIVET--HKNLDGYVVNLLKVLSENNRLGCFEKIASDFGVLNDA 131 + ++ET H+++ +V+ L +L + + C + I D + + A Sbjct: 150 ILQTEMMIETLAHRDMGSRLVSFLLILCRDFGVPCADGITIDLKLSHQA 198 >1ABV-A nrPDB Length = 134 Score = 33.5 bits (75), Expect = 0.063, Method: Compositional matrix adjust. Identities = 31/123 (25%), Positives = 55/123 (44%), Gaps = 4/123 (3%) Query: 36 YATALYQAAAKNSSIDAAFQSLQKVESTVKKNPKLGHLLLNPALSLKDRNSVIDAIVETH 95 YA A + A ++ S++ +Q + + V KN ++ LL + AL+ + A+ Sbjct: 10 YAKAAFDFAVEHQSVER-WQDMLAFAAEVTKNEQMAELL-SGALAPETLAESFIAV--CG 65 Query: 96 KNLDGYVVNLLKVLSENNRLGCFEKIASDFGVLNDAHNGLLKGTVTSAEPLDPKSFKRIE 155 + LD NL++V++EN RL + F L + V SA L + +I Sbjct: 66 EQLDENGQNLIRVMAENGRLNALPDVLEQFIHLRAVSEATAEVDVISAAALSEQQLAKIS 125 Query: 156 KAL 158 A+ Sbjct: 126 AAM 128 >4X0Q-A nrPDB Length = 772 Score = 28.9 bits (63), Expect = 1.7, Method: Composition-based stats. Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 4/85 (4%) Query: 4 RVFTRSFASSLRAAASKAAAPP--PVRL--FGVEGTYATALYQAAAKNSSIDAAFQSLQK 59 R T S +++ + +A++P P+R F ++G T + A DA + SLQK Sbjct: 42 RSLTSSKTATIGSRFKQASSPQEIPIRDDGFPIKGCDDTLVVGLAVCWGGRDAYYFSLQK 101 Query: 60 VESTVKKNPKLGHLLLNPALSLKDR 84 + + + L L+P+L+LKDR Sbjct: 102 EQKHSEISASLVPPSLDPSLTLKDR 126 >1QU7-A nrPDB Length = 227 Score = 26.9 bits (58), Expect = 6.2, Method: Compositional matrix adjust. Identities = 13/55 (23%), Positives = 33/55 (60%), Gaps = 4/55 (7%) Query: 48 SSIDAAFQSLQKVESTVKKNP----KLGHLLLNPALSLKDRNSVIDAIVETHKNL 98 +S++ S++++ +TVK+N + HL L+ + + + V+D +V+T +++ Sbjct: 7 ASLEQTAASMEQLTATVKQNAENARQASHLALSASETAQRGGKVVDNVVQTMRDI 61 >4KVK-A nrPDB Length = 621 Score = 26.9 bits (58), Expect = 7.0, Method: Compositional matrix adjust. Identities = 12/21 (57%), Positives = 15/21 (71%) Query: 78 ALSLKDRNSVIDAIVETHKNL 98 AL +K+ N+V DAI E H NL Sbjct: 273 ALFVKEHNAVCDAIKEEHPNL 293 >1TXO-A nrPDB Length = 237 Score = 26.6 bits (57), Expect = 7.5, Method: Compositional matrix adjust. Identities = 17/46 (36%), Positives = 23/46 (50%) Query: 71 GHLLLNPALSLKDRNSVIDAIVETHKNLDGYVVNLLKVLSENNRLG 116 G LL +++ NS I A VE +L+G L +L NRLG Sbjct: 64 GDLLAKLDAAVRAGNSAIAAQVEMEPDLEGMGTTLTAILFAGNRLG 109 >3ZX6-A nrPDB Length = 341 Score = 26.6 bits (57), Expect = 7.7, Method: Compositional matrix adjust. Identities = 13/55 (23%), Positives = 33/55 (60%), Gaps = 4/55 (7%) Query: 48 SSIDAAFQSLQKVESTVKKNP----KLGHLLLNPALSLKDRNSVIDAIVETHKNL 98 +S++ S++++ +TVK+N + HL L+ + + + V+D +V+T +++ Sbjct: 87 ASLEETAASMEQLTATVKQNAENARQASHLALSASETAQRGGKVVDNVVQTMRDI 141 >1FOE-A nrPDB Length = 377 Score = 26.6 bits (57), Expect = 7.8, Method: Compositional matrix adjust. Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 3/57 (5%) Query: 74 LLNPALSLKDRNSVIDAIVETHKNLDGYVVNLLKVLSENNRLGCFEKIASDFGVLND 130 +L L L++ ++ DA E H +LD + + KV S N + +KI +FG + D Sbjct: 164 VLKYPLLLRELFALTDAESEEHYHLDVAIKTMNKVASHINEM---QKIHEEFGAVFD 217 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 6CP3-Y nrPDB 226 6e-60 5LQX-U nrPDB 198 1e-51 2WSS-S nrPDB 196 6e-51 6FKI-d nrPDB 172 9e-44 6N30-I nrPDB 171 1e-43 5T4Q-L nrPDB 148 2e-36 5DN6-H nrPDB 145 2e-35 2JMX-A nrPDB 126 6e-30 Sequences not found previously or not previously below threshold: 1ABV-A nrPDB 106 9e-24 5XKD-A nrPDB 31 0.41 2ZU0-A nrPDB 30 0.89 1Z8P-A nrPDB 29 1.5 6CI9-A nrPDB 28 2.6 3GRO-A nrPDB 27 4.7 5LQZ-A nrPDB 27 4.8 5A0Y-B nrPDB 27 7.2 >6CP3-Y nrPDB Length = 195 Score = 226 bits (575), Expect = 6e-60, Method: Composition-based stats. Identities = 195/195 (100%), Positives = 195/195 (100%) Query: 18 ASKAAAPPPVRLFGVEGTYATALYQAAAKNSSIDAAFQSLQKVESTVKKNPKLGHLLLNP 77 ASKAAAPPPVRLFGVEGTYATALYQAAAKNSSIDAAFQSLQKVESTVKKNPKLGHLLLNP Sbjct: 1 ASKAAAPPPVRLFGVEGTYATALYQAAAKNSSIDAAFQSLQKVESTVKKNPKLGHLLLNP 60 Query: 78 ALSLKDRNSVIDAIVETHKNLDGYVVNLLKVLSENNRLGCFEKIASDFGVLNDAHNGLLK 137 ALSLKDRNSVIDAIVETHKNLDGYVVNLLKVLSENNRLGCFEKIASDFGVLNDAHNGLLK Sbjct: 61 ALSLKDRNSVIDAIVETHKNLDGYVVNLLKVLSENNRLGCFEKIASDFGVLNDAHNGLLK 120 Query: 138 GTVTSAEPLDPKSFKRIEKALSASKLVGQGKSLKLENVVKPEIKGGLIVELGDKTVDLSI 197 GTVTSAEPLDPKSFKRIEKALSASKLVGQGKSLKLENVVKPEIKGGLIVELGDKTVDLSI Sbjct: 121 GTVTSAEPLDPKSFKRIEKALSASKLVGQGKSLKLENVVKPEIKGGLIVELGDKTVDLSI 180 Query: 198 STKIQKLNKVLEDSI 212 STKIQKLNKVLEDSI Sbjct: 181 STKIQKLNKVLEDSI 195 >5LQX-U nrPDB Length = 194 Score = 198 bits (503), Expect = 1e-51, Method: Composition-based stats. Identities = 107/195 (54%), Positives = 146/195 (74%), Gaps = 1/195 (0%) Query: 18 ASKAAAPPPVRLFGVEGTYATALYQAAAKNSSIDAAFQSLQKVESTVKKNPKLGHLLLNP 77 AS A PPV+LFG++GTYATAL+ A+AK+SSI+ FQS+QK+ ST+ K+ K+ +L NP Sbjct: 1 ASAAPIKPPVQLFGLDGTYATALFSASAKDSSIEKTFQSVQKLSSTISKDAKVAQVLSNP 60 Query: 78 ALSLKDRNSVIDAIVETHKNLDGYVVNLLKVLSENNRLGCFEKIASDFGVLNDAHNGLLK 137 ALSL R V+ + + K L+ V NLL VL+ENNRL F+ IA F VLNDA+NG+++ Sbjct: 61 ALSLNSRKEVVSVLSKELK-LEPVVSNLLTVLAENNRLSLFDSIAKQFSVLNDAYNGVVE 119 Query: 138 GTVTSAEPLDPKSFKRIEKALSASKLVGQGKSLKLENVVKPEIKGGLIVELGDKTVDLSI 197 TV SA+PLD K R+ K+++ SK VG GK+LK++N V PEI GGLIVE+ DK+VDLS+ Sbjct: 120 ATVVSAKPLDSKILNRLTKSITNSKYVGPGKTLKIKNEVDPEILGGLIVEVADKSVDLSL 179 Query: 198 STKIQKLNKVLEDSI 212 ++K+ KLNKVL ++I Sbjct: 180 ASKVNKLNKVLSETI 194 >2WSS-S nrPDB Length = 190 Score = 196 bits (498), Expect = 6e-51, Method: Composition-based stats. Identities = 65/190 (34%), Positives = 104/190 (54%), Gaps = 4/190 (2%) Query: 23 APPPVRLFGVEGTYATALYQAAAKNSSIDAAFQSLQKVESTVKKNPKLGHLLLNPALSLK 82 PPV+++G+EG YATALY AA+K + ++ + L +V + K PK+ LLNP + Sbjct: 5 VRPPVQIYGIEGRYATALYSAASKQNKLEQVEKELLRV-GQILKEPKMAASLLNPYVKRS 63 Query: 83 DRNSVIDAIVETHKNLDGYVVNLLKVLSENNRLGCFEKIASDFGVLNDAHNGLLKGTVTS 142 + + + K NL+ +L+EN RL + S F + H G + TVT+ Sbjct: 64 VKVKSLSDMTAKEK-FSPLTSNLINLLAENGRLTNTPAVISAFSTMMSVHRGEVPCTVTT 122 Query: 143 AEPLDPKSFKRIEKALSASKLVGQGKSLKLENVVKPEIKGGLIVELGDKTVDLSISTKIQ 202 A LD + ++ L + +G+ LKLE + P I GG+IV +G+K VD+S TKIQ Sbjct: 123 ASALDETTLTELKTVL--KSFLSKGQVLKLEVKIDPSIMGGMIVRIGEKYVDMSAKTKIQ 180 Query: 203 KLNKVLEDSI 212 KL++ + + + Sbjct: 181 KLSRAMREIL 190 >6FKI-d nrPDB Length = 257 Score = 172 bits (436), Expect = 9e-44, Method: Composition-based stats. Identities = 55/222 (24%), Positives = 105/222 (47%), Gaps = 23/222 (10%) Query: 6 FTRSFASS------LRA---AASKAAAPPPVRLFGV------EGTYATALYQAAAKNSSI 50 F+ SF+SS LR ASK A P G YA+AL A ++ Sbjct: 33 FSLSFSSSTATFNPLRLKILTASKLTAKPRGGALGTRMVDSTASRYASALADVADVTGTL 92 Query: 51 DAAFQSLQKVESTVKKNPKLGHLLLNPALSLKDRNSVIDAIVETHKNLDGYVVNLLKVLS 110 +A ++K+ + P + + NP +S+ ++ SV+D I+ T L + N + +L Sbjct: 93 EATNSDVEKLIRIFSEEP-VYYFFANPVISIDNKRSVLDEIITT-SGLQPHTANFINILI 150 Query: 111 ENNRLGCFEKIASDFGVLNDAHNGLLKGTVTSAEPLDPKSFKRIEKALSASKLVGQGKSL 170 ++ R+ ++I ++F + + G VTS L+ +I K + K+ G K++ Sbjct: 151 DSERINLVKEILNEFEDVFNKITGTEVAVVTSVVKLENDHLAQIAKGV--QKITG-AKNV 207 Query: 171 KLENVVKPEIKGGLIVELGD---KTVDLSISTKIQKLNKVLE 209 +++ V+ P + G + G+ K VD+S+ +++++ LE Sbjct: 208 RIKTVIDPSLVAGFTIRYGNEGSKLVDMSVKKQLEEIAAQLE 249 >6N30-I nrPDB Length = 178 Score = 171 bits (434), Expect = 1e-43, Method: Composition-based stats. Identities = 48/177 (27%), Positives = 92/177 (51%), Gaps = 6/177 (3%) Query: 32 VEGTYATALYQAAAKNSSIDAAFQSLQKVESTVKKNPKLGHLLLNPALSLKDRNSVIDAI 91 + YA+AL+Q A + +D + ++ V + +N + LL P LSL + ++I Sbjct: 6 IAKRYASALFQIALEQGQLDRIEEDVRAVRQALAENGEFLSLLSYPKLSLDQKKALI--- 62 Query: 92 VETHKNLDGYVVNLLKVLSENNRLGCFEKIASDFGVLNDAHNGLLKGTVTSAEPLDPKSF 151 E + V N L +L E +R G ++A F L D G+ K SA PL + Sbjct: 63 AEAFAGVSTPVQNTLLLLLERHRFGLVPELAEQFLALVDDARGIAKAVAYSARPLTDEEL 122 Query: 152 KRIEKALSASKLVGQGKSLKLENVVKPEIKGGLIVELGDKTVDLSISTKIQKLNKVL 208 + + + VG+ ++L++EN++ PE+ GG+ + +G++ D S+S +++++ + L Sbjct: 123 RALSDVFAQK--VGK-QTLEIENIIDPELIGGVRLRIGNRIYDGSVSGQLERIRRQL 176 >5T4Q-L nrPDB Length = 177 Score = 148 bits (373), Expect = 2e-36, Method: Composition-based stats. Identities = 43/178 (24%), Positives = 80/178 (44%), Gaps = 8/178 (4%) Query: 32 VEGTYATALYQAAAKNSSIDAAFQSLQKVESTVKKNPKLGHLLLNPALSLKDRNSVIDAI 91 V YA A + A ++ S++ +Q + + V KN ++ LL + AL+ + A+ Sbjct: 7 VARPYAKAAFDFAVEHQSVER-WQDMLAFAAEVTKNEQMAELL-SGALAPETLAESFIAV 64 Query: 92 VETHKNLDGYVVNLLKVLSENNRLGCFEKIASDFGVLNDAHNGLLKGTVTSAEPLDPKSF 151 + LD NL++V++EN RL + F L + V SA L + Sbjct: 65 --AGEQLDENGQNLIRVMAENGRLNALPDVLEQFIHLRAVSEATAEVDVISAAALSEQQL 122 Query: 152 KRIEKALSASKLVGQGKSLKLENVVKPEIKGGLIVELGDKTVDLSISTKIQKLNKVLE 209 +I A+ + +KL + + G+I+ GD +D S+ ++++L VL+ Sbjct: 123 AKISAAMEKR----LSRKVKLNAKIDKSVMAGVIIRAGDMVIDGSVRGRLERLADVLQ 176 >5DN6-H nrPDB Length = 188 Score = 145 bits (365), Expect = 2e-35, Method: Composition-based stats. Identities = 47/179 (26%), Positives = 82/179 (45%), Gaps = 5/179 (2%) Query: 32 VEGTYATALYQAAAKNSSIDAAFQSLQKVESTVKKNPKLGHLLLNPALSLKDRNSVIDAI 91 + G YA AL+ + IDA + + S + L L L+P + + + + A+ Sbjct: 13 IAGRYAQALFDLVRDSGGIDALSSQIDDLASAYDASQDLRDLTLSPLYDRQQQEAAVGAL 72 Query: 92 VETHKNLDGYVVNLLKVLSENNRLGCFEKIASDFGVLNDAHNGLLKGTVTSAEPLDPKSF 151 E L + N L++L+ N RL + + L G + V SA+ L + Sbjct: 73 SE-RMGLSAELANTLRLLARNRRLFTLPQFVAKLRNLIADAKGEVTADVVSAQALTDEQK 131 Query: 152 KRIEKALSASKLVGQGKSLKLENVVKPEIKGGLIVELGDKTVDLSISTKIQKLNKVLED 210 R+ L+A GK++KL V + GG+IV+LG + +D SI +K+ L +++ Sbjct: 132 ARLADTLAAKS----GKTVKLNARVDESLIGGMIVKLGSQMIDSSIRSKLASLQNAMKE 186 >2JMX-A nrPDB Length = 120 Score = 126 bits (317), Expect = 6e-30, Method: Composition-based stats. Identities = 38/118 (32%), Positives = 60/118 (50%), Gaps = 2/118 (1%) Query: 23 APPPVRLFGVEGTYATALYQAAAKNSSIDAAFQSLQKVESTVKKNPKLGHLLLNPALSLK 82 PPV+++G+EG YATALY AA+K + ++ + L +V + K PK+ LLNP + Sbjct: 5 VRPPVQIYGIEGRYATALYSAASKQNKLEQVEKELLRV-GQILKEPKMAASLLNPYVKRS 63 Query: 83 DRNSVIDAIVETHKNLDGYVVNLLKVLSENNRLGCFEKIASDFGVLNDAHNGLLKGTV 140 + + + K NL+ +L+EN RL + S F + H G + TV Sbjct: 64 VKVKSLSDMTAKEK-FSPLTSNLINLLAENGRLTNTPAVISAFSTMMSVHRGEVPCTV 120 >1ABV-A nrPDB Length = 134 Score = 106 bits (263), Expect = 9e-24, Method: Composition-based stats. Identities = 32/130 (24%), Positives = 56/130 (43%), Gaps = 4/130 (3%) Query: 32 VEGTYATALYQAAAKNSSIDAAFQSLQKVESTVKKNPKLGHLLLNPALSLKDRNSVIDAI 91 V YA A + A ++ S++ +Q + + V KN ++ LL + AL+ + A+ Sbjct: 6 VARPYAKAAFDFAVEHQSVER-WQDMLAFAAEVTKNEQMAELL-SGALAPETLAESFIAV 63 Query: 92 VETHKNLDGYVVNLLKVLSENNRLGCFEKIASDFGVLNDAHNGLLKGTVTSAEPLDPKSF 151 + LD NL++V++EN RL + F L + V SA L + Sbjct: 64 C--GEQLDENGQNLIRVMAENGRLNALPDVLEQFIHLRAVSEATAEVDVISAAALSEQQL 121 Query: 152 KRIEKALSAS 161 +I A+ Sbjct: 122 AKISAAMEKR 131 >5XKD-A nrPDB Length = 453 Score = 30.9 bits (68), Expect = 0.41, Method: Composition-based stats. Identities = 20/115 (17%), Positives = 43/115 (37%), Gaps = 9/115 (7%) Query: 20 KAAAPPPVRLFGVEGTYATALYQAAAKNSSIDAAFQSLQKVESTVKKNPKLGHLLLN--P 77 +A P R F G +A A++ + + A +Q ++ + ++P+ + P Sbjct: 227 QAGLSPRGRRF--AGRWAEAVFSVSPNLDIMRAVYQDIKAHVAAAGRDPEQTKVFTAVMP 284 Query: 78 ALSLKDRN-----SVIDAIVETHKNLDGYVVNLLKVLSENNRLGCFEKIASDFGV 127 L ++ ++++V L + LS+ F I +D G Sbjct: 285 VLGETEQVARERLEYLNSLVHPEVGLSTLSSHSGLNLSKYPLDTKFSDIVADLGD 339 >2ZU0-A nrPDB Length = 423 Score = 29.7 bits (65), Expect = 0.89, Method: Composition-based stats. Identities = 26/145 (17%), Positives = 46/145 (31%), Gaps = 17/145 (11%) Query: 27 VRLFGVEGTYATALYQAAAKNSSIDAAFQSLQKVESTVKKN------PKLGHLLLNPALS 80 VRL V+G Y AL A + + Q + ++ L + + A+ Sbjct: 84 VRLVFVDGRYVPALSDATEGSGYEVSINDDRQGLPDAIQAEVFLHLTESLAQSVTHIAVK 143 Query: 81 LKDRNSVIDAIVETHKNLDGYVVNLLKV-----LSENNRLGCFEKIASDFGVLNDAHNGL 135 R + ++ + + G VN L+E G + F LNDA + Sbjct: 144 RGQRPAKPLLLMHITQGVAGEEVNTAHYRHHLDLAE----GAEATVIEHFVSLNDARHFT 199 Query: 136 LKGTVTSAEPLDPKSFKRIEKALSA 160 + + I+ A Sbjct: 200 GARFTINVAA--NAHLQHIKLAFEN 222 >1Z8P-A nrPDB Length = 404 Score = 29.0 bits (63), Expect = 1.5, Method: Composition-based stats. Identities = 12/55 (21%), Positives = 19/55 (34%) Query: 92 VETHKNLDGYVVNLLKVLSENNRLGCFEKIASDFGVLNDAHNGLLKGTVTSAEPL 146 E VVN + L E R + + S + D +G L ++ L Sbjct: 182 AEQRGQAAREVVNFILDLVERRRTEPGDDLLSALIRVQDDDDGRLSADELTSIAL 236 >6CI9-A nrPDB Length = 259 Score = 28.2 bits (61), Expect = 2.6, Method: Composition-based stats. Identities = 21/137 (15%), Positives = 42/137 (30%), Gaps = 9/137 (6%) Query: 12 SSLRAAASKAAAPPPVRLFGVEGTYATALYQAAAKNSSIDAAFQSLQKVESTVKKNPKLG 71 +SL ++ G+ T+A A + D +++ + T K + Sbjct: 5 TSLEGRSAIVTGGSKGIGRGIAETFANAGVDVVITGRNQDDLDRTVADLSGTRGKVTAVR 64 Query: 72 HLLLNPALSLKDRNSVIDAIVETHKNLDGYVVNLLKVLSENNRL-GCFEKIASDFGVLND 130 + +P +D + V H LD N + + RL +N Sbjct: 65 ADVTDP----EDARRTVAETVSRHGGLDIVCANA--GIFPSGRLEDLTPDDIEQVLGVN- 117 Query: 131 AHNGLLKGTVTSAEPLD 147 G + + + L Sbjct: 118 -FKGTVYIVQAALQALT 133 >3GRO-A nrPDB Length = 298 Score = 27.4 bits (59), Expect = 4.7, Method: Composition-based stats. Identities = 13/90 (14%), Positives = 29/90 (32%), Gaps = 4/90 (4%) Query: 53 AFQSLQKVESTVKKNPKLGHLLLNPALSLKDRNSVIDAIVETHKNLDGYVVNLLKVLSEN 112 + V + K+PKL A+ + A+ + ++NL+ V ++ Sbjct: 68 VNSQVTTVCQALAKDPKLQQ--GYNAMGFSQGGQFLRAVAQRCP--SPPMINLISVGGQH 123 Query: 113 NRLGCFEKIASDFGVLNDAHNGLLKGTVTS 142 + + + + D L S Sbjct: 124 QGVFGLPRCPGESSHICDFIRKTLNAGAYS 153 >5LQZ-A nrPDB Length = 510 Score = 27.4 bits (59), Expect = 4.8, Method: Composition-based stats. Identities = 12/99 (12%), Positives = 28/99 (28%), Gaps = 11/99 (11%) Query: 62 STVKKNPKLGHLLLNPALSLKDRNSVIDAIVETHKNLDGYVVNLLKVLSENNRLGCFEKI 121 T+ + +L LL S + + I +N + + Sbjct: 418 QTLSRGERLTQLLKQKQYSPQASEEQVPVIYAGVNGF-----------LDNIPIERIPEF 466 Query: 122 ASDFGVLNDAHNGLLKGTVTSAEPLDPKSFKRIEKALSA 160 F A+ G + + + L + +++ A Sbjct: 467 EEQFIAYLKANEGDILEAIRTKGELSSELLDKLKSATET 505 >5A0Y-B nrPDB Length = 443 Score = 26.7 bits (57), Expect = 7.2, Method: Composition-based stats. Identities = 18/93 (19%), Positives = 31/93 (33%), Gaps = 2/93 (2%) Query: 122 ASDFGVLND--AHNGLLKGTVTSAEPLDPKSFKRIEKALSASKLVGQGKSLKLENVVKPE 179 + F D G L E L P I+ + K +EN +K Sbjct: 1 MAKFEDKVDLYDDRGNLVEEQVPLEALSPLRNPAIKSIVQGIKRTVAVNLEGIENALKTA 60 Query: 180 IKGGLIVELGDKTVDLSISTKIQKLNKVLEDSI 212 GG ++ + +DL I + + ++ I Sbjct: 61 KVGGPACKIMGRELDLDIVGNAESIAAAAKEMI 93 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.308 0.125 0.280 Lambda K H 0.267 0.0382 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 5,683,724 Number of Sequences: 36641 Number of extensions: 175070 Number of successful extensions: 568 Number of sequences better than 10.0: 17 Number of HSP's better than 10.0 without gapping: 22 Number of HSP's successfully gapped in prelim test: 19 Number of HSP's that attempted gapping in prelim test: 521 Number of HSP's gapped (non-prelim): 42 length of query: 212 length of database: 10,336,785 effective HSP length: 93 effective length of query: 119 effective length of database: 6,929,172 effective search space: 824571468 effective search space used: 824571468 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.7 bits) S2: 57 (26.7 bits)