BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= P09341 (107 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 1MSH-A nrPDB 148 5e-37 5OB5-A nrPDB 120 1e-28 1MI2-A nrPDB 102 5e-23 1ROD-A nrPDB 97 1e-21 1F9P-A nrPDB 93 3e-20 1NAP-A nrPDB 90 2e-19 2MGS-A nrPDB 85 6e-18 1PFN-A nrPDB 77 2e-15 4XDX-A nrPDB 70 2e-13 1PLF-A nrPDB 67 1e-12 1LV9-A nrPDB 39 4e-04 5CBA-E nrPDB 36 0.005 1RJT-A nrPDB 34 0.015 2R3Z-A nrPDB 34 0.015 5L7M-A nrPDB 33 0.035 2HDL-A nrPDB 32 0.055 6EHZ-A nrPDB 32 0.091 1G2S-A nrPDB 31 0.15 2K04-A nrPDB 30 0.17 1ZXT-A nrPDB 30 0.27 2N55-A nrPDB 30 0.29 4LMQ-D nrPDB 29 0.45 4MHE-A nrPDB 28 0.78 5VKT-A nrPDB 28 0.79 6HIY-CO nrPDB 28 1.0 2HCC-A nrPDB 27 2.0 1HHV-A nrPDB 27 2.6 4RWS-C nrPDB 26 3.2 6EEM-B nrPDB 25 7.4 1G91-A nrPDB 25 8.9 >1MSH-A nrPDB Length = 72 Score = 148 bits (374), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 72/72 (100%), Positives = 72/72 (100%) Query: 35 ASVATELRCQCLQTLQGIHPKNIQSVNVKSPGPHCAQTEVIATLKNGRKACLNPASPIVK 94 ASVATELRCQCLQTLQGIHPKNIQSVNVKSPGPHCAQTEVIATLKNGRKACLNPASPIVK Sbjct: 1 ASVATELRCQCLQTLQGIHPKNIQSVNVKSPGPHCAQTEVIATLKNGRKACLNPASPIVK 60 Query: 95 KIIEKMLNSDKS 106 KIIEKMLNSDKS Sbjct: 61 KIIEKMLNSDKS 72 >5OB5-A nrPDB Length = 63 Score = 120 bits (302), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 58/62 (93%), Positives = 60/62 (96%) Query: 40 ELRCQCLQTLQGIHPKNIQSVNVKSPGPHCAQTEVIATLKNGRKACLNPASPIVKKIIEK 99 ELRCQCLQTLQGIH KNIQSV VKSPGPHCAQTEVIATLKNG+KACLNPASP+VKKIIEK Sbjct: 1 ELRCQCLQTLQGIHLKNIQSVKVKSPGPHCAQTEVIATLKNGQKACLNPASPMVKKIIEK 60 Query: 100 ML 101 ML Sbjct: 61 ML 62 >1MI2-A nrPDB Length = 73 Score = 102 bits (253), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 48/73 (65%), Positives = 61/73 (83%) Query: 35 ASVATELRCQCLQTLQGIHPKNIQSVNVKSPGPHCAQTEVIATLKNGRKACLNPASPIVK 94 A VA+ELRCQCL+TL + KNIQS++V PGPHCAQTEVIATLK G+K CL+P +P+V+ Sbjct: 1 AVVASELRCQCLKTLPRVDFKNIQSLSVTPPGPHCAQTEVIATLKGGQKVCLDPEAPLVQ 60 Query: 95 KIIEKMLNSDKSN 107 KII+K+LN K+N Sbjct: 61 KIIQKILNKGKAN 73 >1ROD-A nrPDB Length = 72 Score = 97.4 bits (241), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 46/71 (64%), Positives = 55/71 (77%), Gaps = 1/71 (1%) Query: 38 ATELRCQCLQTL-QGIHPKNIQSVNVKSPGPHCAQTEVIATLKNGRKACLNPASPIVKKI 96 A ELRCQC++T + HPK I+ + V GPHCA TE+I L +GR+ CL+PASPIVKKI Sbjct: 2 AKELRCQCIKTYSKPFHPKFIKELRVIESGPHCANTEIIVKLSDGRELCLDPASPIVKKI 61 Query: 97 IEKMLNSDKSN 107 IEKMLNSDKSN Sbjct: 62 IEKMLNSDKSN 72 >1F9P-A nrPDB Length = 85 Score = 92.8 bits (229), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 43/82 (52%), Positives = 58/82 (70%), Gaps = 1/82 (1%) Query: 26 VAAGRRAA-GASVATELRCQCLQTLQGIHPKNIQSVNVKSPGPHCAQTEVIATLKNGRKA 84 +A G+ + + + ELRC C++T GIHPKNIQS+ V G HC Q EVIATLK+GRK Sbjct: 2 LAKGKEESLDSDLYAELRCMCIKTTSGIHPKNIQSLEVIGKGTHCNQVEVIATLKDGRKI 61 Query: 85 CLNPASPIVKKIIEKMLNSDKS 106 CL+P +P +KKI++K L D+S Sbjct: 62 CLDPDAPRIKKIVQKKLAGDES 83 >1NAP-A nrPDB Length = 70 Score = 90.1 bits (222), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 41/67 (61%), Positives = 51/67 (76%) Query: 40 ELRCQCLQTLQGIHPKNIQSVNVKSPGPHCAQTEVIATLKNGRKACLNPASPIVKKIIEK 99 ELRC C++T GIHPKNIQS+ V G HC Q EVIATLK+GRK CL+P +P +KKI++K Sbjct: 2 ELRCLCIKTTSGIHPKNIQSLEVIGKGTHCNQVEVIATLKDGRKICLDPDAPRIKKIVQK 61 Query: 100 MLNSDKS 106 L D+S Sbjct: 62 KLAGDES 68 >2MGS-A nrPDB Length = 78 Score = 85.1 bits (209), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 38/74 (51%), Positives = 57/74 (77%), Gaps = 1/74 (1%) Query: 35 ASVATELRCQCLQTLQGIHPKNIQSVNVKSPGPHCAQTEVIATLKNGRKACLNPASPIVK 94 A+V ELRC CLQT QG+HPK I ++ V + GP C++ EV+A+LKNG++ CL+P +P +K Sbjct: 5 AAVLRELRCVCLQTTQGVHPKMISNLQVFAIGPQCSKVEVVASLKNGKEICLDPEAPFLK 64 Query: 95 KIIEKMLN-SDKSN 107 K+I+K+L+ +K N Sbjct: 65 KVIQKILDGGNKEN 78 >1PFN-A nrPDB Length = 68 Score = 77.0 bits (188), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 35/66 (53%), Positives = 48/66 (72%) Query: 38 ATELRCQCLQTLQGIHPKNIQSVNVKSPGPHCAQTEVIATLKNGRKACLNPASPIVKKII 97 A ELRCQC++T + P++I S+ V GPHC ++IATLKNGRK CL+ +P+ KKII Sbjct: 3 AKELRCQCVKTTSQVRPRHITSLEVIKAGPHCPTAQLIATLKNGRKICLDLQAPLYKKII 62 Query: 98 EKMLNS 103 +K+L S Sbjct: 63 KKLLES 68 >4XDX-A nrPDB Length = 70 Score = 70.1 bits (170), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 30/63 (47%), Positives = 43/63 (68%), Gaps = 1/63 (1%) Query: 40 ELRCQCLQTL-QGIHPKNIQSVNVKSPGPHCAQTEVIATLKNGRKACLNPASPIVKKIIE 98 ELRCQC++T + HPK I+ + V GPHCA TE+I L +GR+ CL+P V++++E Sbjct: 2 ELRCQCIKTYSKPFHPKFIKELRVIESGPHCANTEIIVKLSDGRELCLDPKENWVQRVVE 61 Query: 99 KML 101 K L Sbjct: 62 KFL 64 >1PLF-A nrPDB Length = 72 Score = 67.4 bits (163), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 31/64 (48%), Positives = 46/64 (71%) Query: 40 ELRCQCLQTLQGIHPKNIQSVNVKSPGPHCAQTEVIATLKNGRKACLNPASPIVKKIIEK 99 +L+C CL+T GI+P++I S+ V G HC ++IATLK GRK CL+ +P+ KKII++ Sbjct: 9 DLQCVCLKTTSGINPRHISSLEVIGAGLHCPSPQLIATLKTGRKICLDQQNPLYKKIIKR 68 Query: 100 MLNS 103 +L S Sbjct: 69 LLKS 72 >1LV9-A nrPDB Length = 77 Score = 39.3 bits (90), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 19/60 (31%), Positives = 37/60 (61%), Gaps = 2/60 (3%) Query: 41 LRCQCLQ-TLQGIHPKNIQSVNVKSPGPHCAQTEVIATL-KNGRKACLNPASPIVKKIIE 98 +RC C+ + Q ++P++++ + + C + E+IAT+ K G K CLNP S +K +++ Sbjct: 7 VRCTCISISNQPVNPRSLEKLEIIPASQFCPRVEIIATMKKKGEKRCLNPESKAIKNLLK 66 >5CBA-E nrPDB Length = 88 Score = 35.8 bits (81), Expect = 0.005, Method: Compositional matrix adjust. Identities = 17/62 (27%), Positives = 32/62 (51%), Gaps = 1/62 (1%) Query: 38 ATELRCQCLQTLQGIHPKN-IQSVNVKSPGPHCAQTEVIATLKNGRKACLNPASPIVKKI 96 T LRC+C+Q P+ I + + G C + E+I KN C++P + ++++ Sbjct: 7 YTSLRCRCVQESSVFIPRRFIDRIQILPRGNGCPRKEIIVWKKNKSIVCVDPQAEWIQRM 66 Query: 97 IE 98 +E Sbjct: 67 ME 68 >1RJT-A nrPDB Length = 73 Score = 33.9 bits (76), Expect = 0.015, Method: Compositional matrix adjust. Identities = 21/61 (34%), Positives = 35/61 (57%), Gaps = 2/61 (3%) Query: 42 RCQCLQ-TLQGIHPKNIQSVNVKSPGPHCAQTEVIATLK-NGRKACLNPASPIVKKIIEK 99 RC C+ ++ + +I+ ++ P +C + EVI TLK N + CLNP S + II+K Sbjct: 8 RCLCIGPGVKAVKVADIEKASIMYPSNNCDKIEVIITLKENKGQRCLNPKSKQARLIIKK 67 Query: 100 M 100 + Sbjct: 68 V 68 >2R3Z-A nrPDB Length = 68 Score = 33.9 bits (76), Expect = 0.015, Method: Compositional matrix adjust. Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 2/64 (3%) Query: 37 VATELRCQCLQTLQG-IHPKNIQSVNVKSPGPHCAQTEVIATLK-NGRKACLNPASPIVK 94 +A +RC C+ G + + I + + C + E+IAT+K N + CLNP S +K Sbjct: 3 LARTVRCNCIHIDDGPVRMRAIGKLEIIPASLSCPRVEIIATMKKNDEQRCLNPESKTIK 62 Query: 95 KIIE 98 +++ Sbjct: 63 NLMK 66 >5L7M-A nrPDB Length = 88 Score = 32.7 bits (73), Expect = 0.035, Method: Compositional matrix adjust. Identities = 18/65 (27%), Positives = 36/65 (55%), Gaps = 5/65 (7%) Query: 39 TELRCQC---LQTLQGIHPKNIQSVNVKSPGPHCAQTEVIATLKNGRKACLNPASPIVKK 95 T L+C+C + T+ G++ I + V PG C +TEV+ K + C+NP + +++ Sbjct: 7 TNLKCRCSGVISTVVGLN--IIDRIQVTPPGNGCPKTEVVIWTKMKKVICVNPRAKWLQR 64 Query: 96 IIEKM 100 ++ + Sbjct: 65 LLRHV 69 >2HDL-A nrPDB Length = 78 Score = 32.0 bits (71), Expect = 0.055, Method: Compositional matrix adjust. Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 6/67 (8%) Query: 42 RCQCLQTLQGIHPKNIQSVNVKSPGPHCAQTEVIATLKN-----GRKACLNPASPIVKKI 96 +C+C + I +++ + +K PHC + VI T K+ G++ CL+P K+ Sbjct: 3 KCKCSRKGPKIRYSDVKKLEMKPKYPHCEEKMVIITTKSVSRYRGQEHCLHPKLQSTKRF 62 Query: 97 IEKMLNS 103 I K N+ Sbjct: 63 I-KWYNA 68 >6EHZ-A nrPDB Length = 98 Score = 31.6 bits (70), Expect = 0.091, Method: Compositional matrix adjust. Identities = 20/70 (28%), Positives = 38/70 (54%), Gaps = 3/70 (4%) Query: 37 VATELRCQCLQTLQGIHPKNIQSVNVKSPGPHCAQTEVIATLKNG-RKACLNPASPIVKK 95 V+ RC C I N++ + + + P+CA +++A LKN R+ C++P +++ Sbjct: 3 VSLSYRCPCRFFESHIARANVKHLKILN-TPNCA-LQIVARLKNNNRQVCIDPKLKWIQE 60 Query: 96 IIEKMLNSDK 105 +EK LN + Sbjct: 61 YLEKALNKGR 70 >1G2S-A nrPDB Length = 71 Score = 30.8 bits (68), Expect = 0.15, Method: Compositional matrix adjust. Identities = 13/29 (44%), Positives = 17/29 (58%) Query: 69 CAQTEVIATLKNGRKACLNPASPIVKKII 97 C+Q VI T K G+K C +P V+K I Sbjct: 34 CSQRAVIFTTKRGKKVCTHPRKKWVQKYI 62 >2K04-A nrPDB Length = 70 Score = 30.4 bits (67), Expect = 0.17, Method: Compositional matrix adjust. Identities = 19/67 (28%), Positives = 37/67 (55%), Gaps = 3/67 (4%) Query: 37 VATELRCQCLQTLQGIHPKNIQSVNVKSPGPHCAQTEVIATLKNG-RKACLNPASPIVKK 95 V+ RC C + N++ + + + P+CA +++A LKN R+ C++P +++ Sbjct: 5 VSLSYRCPCRFFESHVARANVKHLKILN-TPNCA-CQIVARLKNNNRQVCIDPKLKWIQE 62 Query: 96 IIEKMLN 102 +EK LN Sbjct: 63 YLEKCLN 69 >1ZXT-A nrPDB Length = 76 Score = 30.0 bits (66), Expect = 0.27, Method: Compositional matrix adjust. Identities = 14/49 (28%), Positives = 27/49 (55%), Gaps = 1/49 (2%) Query: 53 HPKNIQSVNVKSP-GPHCAQTEVIATLKNGRKACLNPASPIVKKIIEKM 100 HP +Q + P P C + VI K GR+ C +P+ V+++++++ Sbjct: 18 HPPPVQILKEWYPTSPACPKPGVILLTKRGRQICADPSKNWVRQLMQRL 66 >2N55-A nrPDB Length = 70 Score = 29.6 bits (65), Expect = 0.29, Method: Compositional matrix adjust. Identities = 19/67 (28%), Positives = 36/67 (53%), Gaps = 3/67 (4%) Query: 37 VATELRCQCLQTLQGIHPKNIQSVNVKSPGPHCAQTEVIATLKNG-RKACLNPASPIVKK 95 V+ RC C + N++ + + + P+CA +++A LKN R+ C++P ++ Sbjct: 5 VSLSYRCPCRFFESHVARANVKHLKILN-TPNCA-LQIVARLKNNNRQVCIDPKCKWCQE 62 Query: 96 IIEKMLN 102 +EK LN Sbjct: 63 YLEKALN 69 >4LMQ-D nrPDB Length = 61 Score = 29.3 bits (64), Expect = 0.45, Method: Compositional matrix adjust. Identities = 18/63 (28%), Positives = 35/63 (55%), Gaps = 3/63 (4%) Query: 42 RCQCLQTLQGIHPKNIQSVNVKSPGPHCAQTEVIATLKNG-RKACLNPASPIVKKIIEKM 100 RC C + N++ + + + P+CA +++A LKN R+ C++P +++ +EK Sbjct: 1 RCPCRFFESHVARANVKHLKILN-TPNCA-LQIVARLKNNNRQVCIDPKLKWIQEYLEKA 58 Query: 101 LNS 103 LN Sbjct: 59 LNK 61 >4MHE-A nrPDB Length = 70 Score = 28.5 bits (62), Expect = 0.78, Method: Compositional matrix adjust. Identities = 13/41 (31%), Positives = 19/41 (46%) Query: 60 VNVKSPGPHCAQTEVIATLKNGRKACLNPASPIVKKIIEKM 100 V+ P C + VI K GR+ C +P V+K I + Sbjct: 26 VDYSETSPQCPKPGVILLTKRGRQICADPNKKWVQKYISDL 66 >5VKT-A nrPDB Length = 362 Score = 28.5 bits (62), Expect = 0.79, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 23/53 (43%), Gaps = 4/53 (7%) Query: 1 MARAALSAAPSNPRLLRVALLLLLLVAAGRRAAGASVATELRCQCLQTLQGIH 53 M + + APS P + L ++ G+R AG V + CQ + G H Sbjct: 270 MGQMVVVGAPSTP----LELPAYAIITGGKRVAGNGVGSVADCQAMLDFAGEH 318 >6HIY-CO nrPDB Length = 429 Score = 28.1 bits (61), Expect = 1.0, Method: Composition-based stats. Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 3/42 (7%) Query: 60 VNVKSPGPHCAQTEVIATLKNGRKACLNPASPIVKKIIEKML 101 +N + P PH Q LKN A N +P+ KK E+ML Sbjct: 81 MNPEPPTPHMPQRR---ALKNVHGAVFNDLTPVQKKRQEQML 119 >2HCC-A nrPDB Length = 66 Score = 26.9 bits (58), Expect = 2.0, Method: Compositional matrix adjust. Identities = 11/33 (33%), Positives = 19/33 (57%) Query: 68 HCAQTEVIATLKNGRKACLNPASPIVKKIIEKM 100 C++ VI K GR+ C P+ P V+ ++K+ Sbjct: 29 ECSKPGVIFLTKKGRQVCAKPSGPGVQDCMKKL 61 >1HHV-A nrPDB Length = 74 Score = 26.6 bits (57), Expect = 2.6, Method: Compositional matrix adjust. Identities = 10/32 (31%), Positives = 20/32 (62%) Query: 69 CAQTEVIATLKNGRKACLNPASPIVKKIIEKM 100 C++ VI K GR+ C + + VKK+++++ Sbjct: 38 CSKPGVIFLTKRGRQVCADKSKDWVKKLMQQL 69 >4RWS-C nrPDB Length = 80 Score = 26.2 bits (56), Expect = 3.2, Method: Compositional matrix adjust. Identities = 10/32 (31%), Positives = 20/32 (62%) Query: 69 CAQTEVIATLKNGRKACLNPASPIVKKIIEKM 100 C++ VI K GR+ C + + VKK+++++ Sbjct: 35 CSKPGVIFLTKRGRQVCADKSKDWVKKLMQQL 66 >6EEM-B nrPDB Length = 512 Score = 25.0 bits (53), Expect = 7.4, Method: Composition-based stats. Identities = 13/52 (25%), Positives = 26/52 (50%), Gaps = 5/52 (9%) Query: 35 ASVATELRCQCLQTLQGIHPKNIQSVNVKSP-----GPHCAQTEVIATLKNG 81 AS T Q + GI+PKN++++ P+ Q+ ++A +++G Sbjct: 200 ASDQTHCALQKAAQIAGINPKNVRAIKTSKATNFGLSPNSLQSAILADIESG 251 >1G91-A nrPDB Length = 77 Score = 24.6 bits (52), Expect = 8.9, Method: Compositional matrix adjust. Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 1/37 (2%) Query: 68 HCAQTEVIATLKNGRKACLNPASPIVKKIIEKMLNSD 104 C++ VI K GR+ C NP+ V ++ +ML D Sbjct: 34 ECSKPGVIFLTKKGRRFCANPSDKQV-QVCMRMLKLD 69 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 1F9P-A nrPDB 120 1e-28 1MSH-A nrPDB 108 7e-25 1NAP-A nrPDB 107 2e-24 1ROD-A nrPDB 105 4e-24 1MI2-A nrPDB 103 1e-23 2MGS-A nrPDB 100 1e-22 1PLF-A nrPDB 96 4e-21 4XDX-A nrPDB 96 5e-21 1PFN-A nrPDB 94 1e-20 5OB5-A nrPDB 92 4e-20 1LV9-A nrPDB 66 3e-12 Sequences not found previously or not previously below threshold: 2R3Z-A nrPDB 56 3e-09 5CBA-E nrPDB 53 3e-08 5L7M-A nrPDB 44 2e-05 2HDL-A nrPDB 41 9e-05 1ZXT-A nrPDB 41 1e-04 4MHE-A nrPDB 40 2e-04 1RJT-A nrPDB 40 3e-04 6EHZ-A nrPDB 39 5e-04 4LMQ-D nrPDB 37 0.002 2K04-A nrPDB 37 0.002 2N55-A nrPDB 36 0.004 2MP1-A nrPDB 34 0.016 4RWS-C nrPDB 34 0.018 4ZKB-B nrPDB 33 0.022 1HHV-A nrPDB 33 0.024 1G2S-A nrPDB 33 0.026 2RA4-A nrPDB 33 0.029 1NCV-A nrPDB 32 0.059 2HCC-A nrPDB 31 0.11 2Q8T-A nrPDB 31 0.14 2Q8R-E nrPDB 31 0.14 2X6L-A nrPDB 31 0.14 1J9O-A nrPDB 31 0.15 1ESR-A nrPDB 30 0.18 1EIG-A nrPDB 30 0.25 5LTL-A nrPDB 30 0.26 2JYO-A nrPDB 30 0.33 1EQT-A nrPDB 29 0.36 1NR4-A nrPDB 29 0.44 1G91-A nrPDB 28 0.62 2VXW-A nrPDB 28 0.68 5UIW-B nrPDB 28 0.73 5YAM-A nrPDB 28 0.85 4ZLT-F nrPDB 28 0.93 1EOT-A nrPDB 28 0.97 1RYH-A nrPDB 28 1.3 5CHX-A nrPDB 27 1.7 5HZH-A nrPDB 27 1.9 3TH5-A nrPDB 27 1.9 3RYT-C nrPDB 27 1.9 5UIU-A nrPDB 27 1.9 2WKQ-A nrPDB 27 2.4 1MC5-A nrPDB 26 3.2 1DOL-A nrPDB 26 3.3 3MUD-A nrPDB 26 4.4 3S4K-A nrPDB 26 4.8 3COS-A nrPDB 26 5.0 2XR1-A nrPDB 25 6.8 4GZU-A nrPDB 25 7.5 4GYV-A nrPDB 25 7.5 >1F9P-A nrPDB Length = 85 Score = 120 bits (302), Expect = 1e-28, Method: Composition-based stats. Identities = 43/82 (52%), Positives = 58/82 (70%), Gaps = 1/82 (1%) Query: 26 VAAGRRAA-GASVATELRCQCLQTLQGIHPKNIQSVNVKSPGPHCAQTEVIATLKNGRKA 84 +A G+ + + + ELRC C++T GIHPKNIQS+ V G HC Q EVIATLK+GRK Sbjct: 2 LAKGKEESLDSDLYAELRCMCIKTTSGIHPKNIQSLEVIGKGTHCNQVEVIATLKDGRKI 61 Query: 85 CLNPASPIVKKIIEKMLNSDKS 106 CL+P +P +KKI++K L D+S Sbjct: 62 CLDPDAPRIKKIVQKKLAGDES 83 >1MSH-A nrPDB Length = 72 Score = 108 bits (269), Expect = 7e-25, Method: Composition-based stats. Identities = 72/72 (100%), Positives = 72/72 (100%) Query: 35 ASVATELRCQCLQTLQGIHPKNIQSVNVKSPGPHCAQTEVIATLKNGRKACLNPASPIVK 94 ASVATELRCQCLQTLQGIHPKNIQSVNVKSPGPHCAQTEVIATLKNGRKACLNPASPIVK Sbjct: 1 ASVATELRCQCLQTLQGIHPKNIQSVNVKSPGPHCAQTEVIATLKNGRKACLNPASPIVK 60 Query: 95 KIIEKMLNSDKS 106 KIIEKMLNSDKS Sbjct: 61 KIIEKMLNSDKS 72 >1NAP-A nrPDB Length = 70 Score = 107 bits (266), Expect = 2e-24, Method: Composition-based stats. Identities = 41/68 (60%), Positives = 51/68 (75%) Query: 39 TELRCQCLQTLQGIHPKNIQSVNVKSPGPHCAQTEVIATLKNGRKACLNPASPIVKKIIE 98 ELRC C++T GIHPKNIQS+ V G HC Q EVIATLK+GRK CL+P +P +KKI++ Sbjct: 1 AELRCLCIKTTSGIHPKNIQSLEVIGKGTHCNQVEVIATLKDGRKICLDPDAPRIKKIVQ 60 Query: 99 KMLNSDKS 106 K L D+S Sbjct: 61 KKLAGDES 68 >1ROD-A nrPDB Length = 72 Score = 105 bits (262), Expect = 4e-24, Method: Composition-based stats. Identities = 46/71 (64%), Positives = 54/71 (76%), Gaps = 1/71 (1%) Query: 38 ATELRCQCLQTLQ-GIHPKNIQSVNVKSPGPHCAQTEVIATLKNGRKACLNPASPIVKKI 96 A ELRCQC++T HPK I+ + V GPHCA TE+I L +GR+ CL+PASPIVKKI Sbjct: 2 AKELRCQCIKTYSKPFHPKFIKELRVIESGPHCANTEIIVKLSDGRELCLDPASPIVKKI 61 Query: 97 IEKMLNSDKSN 107 IEKMLNSDKSN Sbjct: 62 IEKMLNSDKSN 72 >1MI2-A nrPDB Length = 73 Score = 103 bits (258), Expect = 1e-23, Method: Composition-based stats. Identities = 48/73 (65%), Positives = 61/73 (83%) Query: 35 ASVATELRCQCLQTLQGIHPKNIQSVNVKSPGPHCAQTEVIATLKNGRKACLNPASPIVK 94 A VA+ELRCQCL+TL + KNIQS++V PGPHCAQTEVIATLK G+K CL+P +P+V+ Sbjct: 1 AVVASELRCQCLKTLPRVDFKNIQSLSVTPPGPHCAQTEVIATLKGGQKVCLDPEAPLVQ 60 Query: 95 KIIEKMLNSDKSN 107 KII+K+LN K+N Sbjct: 61 KIIQKILNKGKAN 73 >2MGS-A nrPDB Length = 78 Score = 100 bits (250), Expect = 1e-22, Method: Composition-based stats. Identities = 38/74 (51%), Positives = 57/74 (77%), Gaps = 1/74 (1%) Query: 35 ASVATELRCQCLQTLQGIHPKNIQSVNVKSPGPHCAQTEVIATLKNGRKACLNPASPIVK 94 A+V ELRC CLQT QG+HPK I ++ V + GP C++ EV+A+LKNG++ CL+P +P +K Sbjct: 5 AAVLRELRCVCLQTTQGVHPKMISNLQVFAIGPQCSKVEVVASLKNGKEICLDPEAPFLK 64 Query: 95 KIIEKMLN-SDKSN 107 K+I+K+L+ +K N Sbjct: 65 KVIQKILDGGNKEN 78 >1PLF-A nrPDB Length = 72 Score = 95.5 bits (236), Expect = 4e-21, Method: Composition-based stats. Identities = 31/64 (48%), Positives = 46/64 (71%) Query: 40 ELRCQCLQTLQGIHPKNIQSVNVKSPGPHCAQTEVIATLKNGRKACLNPASPIVKKIIEK 99 +L+C CL+T GI+P++I S+ V G HC ++IATLK GRK CL+ +P+ KKII++ Sbjct: 9 DLQCVCLKTTSGINPRHISSLEVIGAGLHCPSPQLIATLKTGRKICLDQQNPLYKKIIKR 68 Query: 100 MLNS 103 +L S Sbjct: 69 LLKS 72 >4XDX-A nrPDB Length = 70 Score = 95.5 bits (236), Expect = 5e-21, Method: Composition-based stats. Identities = 30/70 (42%), Positives = 45/70 (64%), Gaps = 1/70 (1%) Query: 39 TELRCQCLQTLQ-GIHPKNIQSVNVKSPGPHCAQTEVIATLKNGRKACLNPASPIVKKII 97 ELRCQC++T HPK I+ + V GPHCA TE+I L +GR+ CL+P V++++ Sbjct: 1 KELRCQCIKTYSKPFHPKFIKELRVIESGPHCANTEIIVKLSDGRELCLDPKENWVQRVV 60 Query: 98 EKMLNSDKSN 107 EK L +++ Sbjct: 61 EKFLKRAENS 70 >1PFN-A nrPDB Length = 68 Score = 94.3 bits (233), Expect = 1e-20, Method: Composition-based stats. Identities = 35/66 (53%), Positives = 48/66 (72%) Query: 38 ATELRCQCLQTLQGIHPKNIQSVNVKSPGPHCAQTEVIATLKNGRKACLNPASPIVKKII 97 A ELRCQC++T + P++I S+ V GPHC ++IATLKNGRK CL+ +P+ KKII Sbjct: 3 AKELRCQCVKTTSQVRPRHITSLEVIKAGPHCPTAQLIATLKNGRKICLDLQAPLYKKII 62 Query: 98 EKMLNS 103 +K+L S Sbjct: 63 KKLLES 68 >5OB5-A nrPDB Length = 63 Score = 92.4 bits (228), Expect = 4e-20, Method: Composition-based stats. Identities = 58/63 (92%), Positives = 60/63 (95%) Query: 40 ELRCQCLQTLQGIHPKNIQSVNVKSPGPHCAQTEVIATLKNGRKACLNPASPIVKKIIEK 99 ELRCQCLQTLQGIH KNIQSV VKSPGPHCAQTEVIATLKNG+KACLNPASP+VKKIIEK Sbjct: 1 ELRCQCLQTLQGIHLKNIQSVKVKSPGPHCAQTEVIATLKNGQKACLNPASPMVKKIIEK 60 Query: 100 MLN 102 ML Sbjct: 61 MLK 63 >1LV9-A nrPDB Length = 77 Score = 66.2 bits (160), Expect = 3e-12, Method: Composition-based stats. Identities = 19/64 (29%), Positives = 39/64 (60%), Gaps = 2/64 (3%) Query: 37 VATELRCQCLQ-TLQGIHPKNIQSVNVKSPGPHCAQTEVIATL-KNGRKACLNPASPIVK 94 ++ +RC C+ + Q ++P++++ + + C + E+IAT+ K G K CLNP S +K Sbjct: 3 LSRTVRCTCISISNQPVNPRSLEKLEIIPASQFCPRVEIIATMKKKGEKRCLNPESKAIK 62 Query: 95 KIIE 98 +++ Sbjct: 63 NLLK 66 >2R3Z-A nrPDB Length = 68 Score = 56.2 bits (134), Expect = 3e-09, Method: Composition-based stats. Identities = 18/66 (27%), Positives = 33/66 (50%), Gaps = 2/66 (3%) Query: 37 VATELRCQCLQTLQ-GIHPKNIQSVNVKSPGPHCAQTEVIATL-KNGRKACLNPASPIVK 94 +A +RC C+ + + I + + C + E+IAT+ KN + CLNP S +K Sbjct: 3 LARTVRCNCIHIDDGPVRMRAIGKLEIIPASLSCPRVEIIATMKKNDEQRCLNPESKTIK 62 Query: 95 KIIEKM 100 +++ Sbjct: 63 NLMKAF 68 >5CBA-E nrPDB Length = 88 Score = 53.1 bits (126), Expect = 3e-08, Method: Composition-based stats. Identities = 18/70 (25%), Positives = 34/70 (48%), Gaps = 1/70 (1%) Query: 38 ATELRCQCLQTLQGIHPK-NIQSVNVKSPGPHCAQTEVIATLKNGRKACLNPASPIVKKI 96 T LRC+C+Q P+ I + + G C + E+I KN C++P + ++++ Sbjct: 7 YTSLRCRCVQESSVFIPRRFIDRIQILPRGNGCPRKEIIVWKKNKSIVCVDPQAEWIQRM 66 Query: 97 IEKMLNSDKS 106 +E + S Sbjct: 67 MEVLRKRSSS 76 >5L7M-A nrPDB Length = 88 Score = 43.5 bits (101), Expect = 2e-05, Method: Composition-based stats. Identities = 18/64 (28%), Positives = 35/64 (54%), Gaps = 5/64 (7%) Query: 38 ATELRCQC---LQTLQGIHPKNIQSVNVKSPGPHCAQTEVIATLKNGRKACLNPASPIVK 94 T L+C+C + T+ G++ I + V PG C +TEV+ K + C+NP + ++ Sbjct: 6 YTNLKCRCSGVISTVVGLN--IIDRIQVTPPGNGCPKTEVVIWTKMKKVICVNPRAKWLQ 63 Query: 95 KIIE 98 +++ Sbjct: 64 RLLR 67 >2HDL-A nrPDB Length = 78 Score = 41.2 bits (95), Expect = 9e-05, Method: Composition-based stats. Identities = 17/62 (27%), Positives = 32/62 (51%), Gaps = 5/62 (8%) Query: 42 RCQCLQTLQGIHPKNIQSVNVKSPGPHCAQTEVIATLKN-----GRKACLNPASPIVKKI 96 +C+C + I +++ + +K PHC + VI T K+ G++ CL+P K+ Sbjct: 3 KCKCSRKGPKIRYSDVKKLEMKPKYPHCEEKMVIITTKSVSRYRGQEHCLHPKLQSTKRF 62 Query: 97 IE 98 I+ Sbjct: 63 IK 64 >1ZXT-A nrPDB Length = 76 Score = 40.8 bits (94), Expect = 1e-04, Method: Composition-based stats. Identities = 13/49 (26%), Positives = 26/49 (53%), Gaps = 1/49 (2%) Query: 53 HPKNIQSV-NVKSPGPHCAQTEVIATLKNGRKACLNPASPIVKKIIEKM 100 HP +Q + P C + VI K GR+ C +P+ V+++++++ Sbjct: 18 HPPPVQILKEWYPTSPACPKPGVILLTKRGRQICADPSKNWVRQLMQRL 66 >4MHE-A nrPDB Length = 70 Score = 40.4 bits (93), Expect = 2e-04, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 25/58 (43%), Gaps = 2/58 (3%) Query: 43 CQCLQTLQGIHPKNIQSVNVKSPGPHCAQTEVIATLKNGRKACLNPASPIVKKIIEKM 100 C + T I K I V+ P C + VI K GR+ C +P V+K I + Sbjct: 11 CCLVYTSWQIPQKFI--VDYSETSPQCPKPGVILLTKRGRQICADPNKKWVQKYISDL 66 >1RJT-A nrPDB Length = 73 Score = 40.0 bits (92), Expect = 3e-04, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 2/65 (3%) Query: 42 RCQCLQT-LQGIHPKNIQSVNVKSPGPHCAQTEVIATLKNGR-KACLNPASPIVKKIIEK 99 RC C+ ++ + +I+ ++ P +C + EVI TLK + + CLNP S + II+K Sbjct: 8 RCLCIGPGVKAVKVADIEKASIMYPSNNCDKIEVIITLKENKGQRCLNPKSKQARLIIKK 67 Query: 100 MLNSD 104 + + Sbjct: 68 VERKN 72 >6EHZ-A nrPDB Length = 98 Score = 38.9 bits (89), Expect = 5e-04, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 36/65 (55%), Gaps = 3/65 (4%) Query: 42 RCQCLQTLQGIHPKNIQSVNVKSPGPHCAQTEVIATLKNG-RKACLNPASPIVKKIIEKM 100 RC C I N++ + + + P+CA +++A LKN R+ C++P +++ +EK Sbjct: 8 RCPCRFFESHIARANVKHLKILNT-PNCA-LQIVARLKNNNRQVCIDPKLKWIQEYLEKA 65 Query: 101 LNSDK 105 LN + Sbjct: 66 LNKGR 70 >4LMQ-D nrPDB Length = 61 Score = 37.0 bits (84), Expect = 0.002, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 35/63 (55%), Gaps = 3/63 (4%) Query: 42 RCQCLQTLQGIHPKNIQSVNVKSPGPHCAQTEVIATLKNG-RKACLNPASPIVKKIIEKM 100 RC C + N++ + + + P+CA +++A LKN R+ C++P +++ +EK Sbjct: 1 RCPCRFFESHVARANVKHLKILNT-PNCA-LQIVARLKNNNRQVCIDPKLKWIQEYLEKA 58 Query: 101 LNS 103 LN Sbjct: 59 LNK 61 >2K04-A nrPDB Length = 70 Score = 37.0 bits (84), Expect = 0.002, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 35/63 (55%), Gaps = 3/63 (4%) Query: 42 RCQCLQTLQGIHPKNIQSVNVKSPGPHCAQTEVIATLKNG-RKACLNPASPIVKKIIEKM 100 RC C + N++ + + + P+CA +++A LKN R+ C++P +++ +EK Sbjct: 10 RCPCRFFESHVARANVKHLKILNT-PNCA-CQIVARLKNNNRQVCIDPKLKWIQEYLEKC 67 Query: 101 LNS 103 LN Sbjct: 68 LNK 70 >2N55-A nrPDB Length = 70 Score = 35.8 bits (81), Expect = 0.004, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 34/63 (53%), Gaps = 3/63 (4%) Query: 42 RCQCLQTLQGIHPKNIQSVNVKSPGPHCAQTEVIATLKNG-RKACLNPASPIVKKIIEKM 100 RC C + N++ + + + P+CA +++A LKN R+ C++P ++ +EK Sbjct: 10 RCPCRFFESHVARANVKHLKILNT-PNCA-LQIVARLKNNNRQVCIDPKCKWCQEYLEKA 67 Query: 101 LNS 103 LN Sbjct: 68 LNK 70 >2MP1-A nrPDB Length = 77 Score = 33.9 bits (76), Expect = 0.016, Method: Composition-based stats. Identities = 16/57 (28%), Positives = 26/57 (45%), Gaps = 1/57 (1%) Query: 45 CLQTLQGIHPKNI-QSVNVKSPGPHCAQTEVIATLKNGRKACLNPASPIVKKIIEKM 100 CL Q P I ++ + C V+ T GR+ C P P V++II+++ Sbjct: 9 CLSVTQKPIPGYIVRNFHYLLIKDGCRVPAVVFTTLRGRQLCAPPDQPWVERIIQRL 65 >4RWS-C nrPDB Length = 80 Score = 33.9 bits (76), Expect = 0.018, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 33/67 (49%), Gaps = 2/67 (2%) Query: 34 GASVATELRCQCLQTLQGIHPKNIQSVNVKSPGPHCAQTEVIATLKNGRKACLNPASPIV 93 GAS +C CL + P+ + S + C++ VI K GR+ C + + V Sbjct: 2 GASCHRPDKC-CLGYQKRPLPQVLLS-SWYPTSQLCSKPGVIFLTKRGRQVCADKSKDWV 59 Query: 94 KKIIEKM 100 KK+++++ Sbjct: 60 KKLMQQL 66 >4ZKB-B nrPDB Length = 75 Score = 33.5 bits (75), Expect = 0.022, Method: Composition-based stats. Identities = 12/56 (21%), Positives = 23/56 (41%), Gaps = 1/56 (1%) Query: 45 CLQTLQGIHPKNIQSVNVKSPGPHCAQTEVIATLKNGRKACLNPASPIVKKIIEKM 100 C P+N + + C++ VI K R+ C +P+ V+K + + Sbjct: 11 CFSYTSRQIPQNFIA-DYFETSSQCSKPGVIFLTKRSRQVCADPSEEWVQKYVSDL 65 >1HHV-A nrPDB Length = 74 Score = 33.5 bits (75), Expect = 0.024, Method: Composition-based stats. Identities = 10/37 (27%), Positives = 20/37 (54%) Query: 64 SPGPHCAQTEVIATLKNGRKACLNPASPIVKKIIEKM 100 C++ VI K GR+ C + + VKK+++++ Sbjct: 33 PTSQLCSKPGVIFLTKRGRQVCADKSKDWVKKLMQQL 69 >1G2S-A nrPDB Length = 71 Score = 33.1 bits (74), Expect = 0.026, Method: Composition-based stats. Identities = 13/29 (44%), Positives = 17/29 (58%) Query: 69 CAQTEVIATLKNGRKACLNPASPIVKKII 97 C+Q VI T K G+K C +P V+K I Sbjct: 34 CSQRAVIFTTKRGKKVCTHPRKKWVQKYI 62 >2RA4-A nrPDB Length = 76 Score = 33.1 bits (74), Expect = 0.029, Method: Composition-based stats. Identities = 9/32 (28%), Positives = 16/32 (50%) Query: 69 CAQTEVIATLKNGRKACLNPASPIVKKIIEKM 100 C Q VI K G++ C +P V+ ++ + Sbjct: 36 CPQKAVIFRTKLGKEICADPKEKWVQNYMKHL 67 >1NCV-A nrPDB Length = 76 Score = 31.9 bits (71), Expect = 0.059, Method: Composition-based stats. Identities = 8/35 (22%), Positives = 16/35 (45%) Query: 66 GPHCAQTEVIATLKNGRKACLNPASPIVKKIIEKM 100 HC + VI K ++ C +P V+ ++ + Sbjct: 33 SSHCPREAVIFKTKLDKEICADPTQKWVQDFMKHL 67 >2HCC-A nrPDB Length = 66 Score = 31.2 bits (69), Expect = 0.11, Method: Composition-based stats. Identities = 11/38 (28%), Positives = 19/38 (50%) Query: 63 KSPGPHCAQTEVIATLKNGRKACLNPASPIVKKIIEKM 100 C++ VI K GR+ C P+ P V+ ++K+ Sbjct: 24 FETSSECSKPGVIFLTKKGRQVCAKPSGPGVQDCMKKL 61 >2Q8T-A nrPDB Length = 74 Score = 30.8 bits (68), Expect = 0.14, Method: Composition-based stats. Identities = 11/57 (19%), Positives = 22/57 (38%) Query: 44 QCLQTLQGIHPKNIQSVNVKSPGPHCAQTEVIATLKNGRKACLNPASPIVKKIIEKM 100 +C T + ++ C++ ++ K G C NP+ V+ I+ M Sbjct: 15 ECCFTYTTYKIPRQRIMDYYETNSQCSKPGIVFITKRGHSVCTNPSDKWVQDYIKDM 71 >2Q8R-E nrPDB Length = 66 Score = 30.8 bits (68), Expect = 0.14, Method: Composition-based stats. Identities = 11/57 (19%), Positives = 22/57 (38%) Query: 44 QCLQTLQGIHPKNIQSVNVKSPGPHCAQTEVIATLKNGRKACLNPASPIVKKIIEKM 100 +C T + ++ C++ ++ K G C NP+ V+ I+ M Sbjct: 7 ECCFTYTTYKIPRQRIMDYYETNSQCSKPGIVFITKRGHSVCTNPSDKWVQDYIKDM 63 >2X6L-A nrPDB Length = 69 Score = 30.8 bits (68), Expect = 0.14, Method: Composition-based stats. Identities = 11/53 (20%), Positives = 22/53 (41%), Gaps = 1/53 (1%) Query: 45 CLQTLQGIHPKNIQSVNVKSPGPHCAQTEVIATLKNGRKACLNPASPIVKKII 97 C P+N V+ C+Q V+ K ++ C +P+ V++ + Sbjct: 12 CFSYTARKLPRNFV-VDYYETSSLCSQPAVVFQTKRSKQVCADPSESWVQEYV 63 >1J9O-A nrPDB Length = 93 Score = 30.8 bits (68), Expect = 0.15, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 28/67 (41%), Gaps = 5/67 (7%) Query: 34 GASVATELRCQCLQTLQGIHPKNIQSVNVKSPGPHCAQTEVIATLKNGRKACLNPASPIV 93 G+ V+ + C L T Q + I++ + VI K G K C +P + V Sbjct: 2 GSEVSDKRTCVSL-TTQRLPVSRIKTYTITEGSLRA----VIFITKRGLKVCADPQATWV 56 Query: 94 KKIIEKM 100 + ++ M Sbjct: 57 RDVVRSM 63 >1ESR-A nrPDB Length = 76 Score = 30.4 bits (67), Expect = 0.18, Method: Composition-based stats. Identities = 7/33 (21%), Positives = 16/33 (48%) Query: 68 HCAQTEVIATLKNGRKACLNPASPIVKKIIEKM 100 C + VI + G++ C +P V+ ++ + Sbjct: 35 QCPKEAVIFKTQRGKEVCADPKERWVRDSMKHL 67 >1EIG-A nrPDB Length = 73 Score = 30.0 bits (66), Expect = 0.25, Method: Composition-based stats. Identities = 10/37 (27%), Positives = 20/37 (54%) Query: 69 CAQTEVIATLKNGRKACLNPASPIVKKIIEKMLNSDK 105 C + VI T K G+++C +P V++ ++ + K Sbjct: 32 CLKAGVIFTTKKGQQSCGDPKQEWVQRYMKNLDAKQK 68 >5LTL-A nrPDB Length = 100 Score = 30.0 bits (66), Expect = 0.26, Method: Composition-based stats. Identities = 13/54 (24%), Positives = 24/54 (44%), Gaps = 2/54 (3%) Query: 45 CLQTLQGIHPKNIQSVNVKSPGPHCAQTEVIATLKNGRKACLNPASPIVKKIIE 98 CL+ + + P+ + V +C +I K R+ C NP V++ I+ Sbjct: 18 CLKYYEKVLPRRL--VVGYRKALNCHLPAIIFVTKRNREVCTNPNDDWVQEYIK 69 >2JYO-A nrPDB Length = 70 Score = 29.6 bits (65), Expect = 0.33, Method: Composition-based stats. Identities = 18/70 (25%), Positives = 27/70 (38%), Gaps = 1/70 (1%) Query: 38 ATELRCQCLQTLQGIHPKNIQSVNVKSPGPHCAQTEVIATLKNGRKACLNPASPIVKKII 97 A+ C T + +HPK I + C +I K C NP VK I+ Sbjct: 1 ASNFDCCLGYTDRILHPKFIVGFTRQLANEGCDINAIIFHTKKKLSVCANPKQTWVKYIV 60 Query: 98 EKMLNSDKSN 107 ++L+ N Sbjct: 61 -RLLSKKVKN 69 >1EQT-A nrPDB Length = 68 Score = 29.3 bits (64), Expect = 0.36, Method: Composition-based stats. Identities = 8/32 (25%), Positives = 15/32 (46%) Query: 69 CAQTEVIATLKNGRKACLNPASPIVKKIIEKM 100 C+ V+ + R+ C NP V++ I + Sbjct: 34 CSNPAVVFVTRKNRQVCANPEKKWVREYINSL 65 >1NR4-A nrPDB Length = 71 Score = 29.3 bits (64), Expect = 0.44, Method: Composition-based stats. Identities = 17/76 (22%), Positives = 35/76 (46%), Gaps = 6/76 (7%) Query: 32 AAGASVATELRCQCLQTLQGIHPKNIQSVNV-KSPGPHCAQTEVIATLKNGRKACLNPAS 90 A G +V E C CL+ +G P ++ + C++ ++ GR C +P + Sbjct: 1 ARGTNVGRE--C-CLEYFKGAIP--LRKLKTWYQTSEDCSRDAIVFVTVQGRAICSDPNN 55 Query: 91 PIVKKIIEKMLNSDKS 106 VK ++ + + ++S Sbjct: 56 KRVKNAVKYLQSLERS 71 >1G91-A nrPDB Length = 77 Score = 28.5 bits (62), Expect = 0.62, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 26/60 (43%), Gaps = 2/60 (3%) Query: 45 CLQTLQGIHPKNIQSVNVKSPGPHCAQTEVIATLKNGRKACLNPASPIVKKIIEKMLNSD 104 C+ P ++ + C++ VI K GR+ C NP+ V+ + +ML D Sbjct: 12 CISYTPRSIPCSLLE-SYFETNSECSKPGVIFLTKKGRRFCANPSDKQVQ-VCMRMLKLD 69 >2VXW-A nrPDB Length = 69 Score = 28.5 bits (62), Expect = 0.68, Method: Composition-based stats. Identities = 8/32 (25%), Positives = 15/32 (46%) Query: 69 CAQTEVIATLKNGRKACLNPASPIVKKIIEKM 100 C+ V+ + R+ C NP V++ I + Sbjct: 35 CSNPAVVFVTRKNRQVCANPEKKWVREYINSL 66 >5UIW-B nrPDB Length = 75 Score = 28.5 bits (62), Expect = 0.73, Method: Composition-based stats. Identities = 8/32 (25%), Positives = 15/32 (46%) Query: 69 CAQTEVIATLKNGRKACLNPASPIVKKIIEKM 100 C+ V+ + R+ C NP V++ I + Sbjct: 35 CSNPAVVFVTRKNRQVCANPEKKWVREYINSL 66 >5YAM-A nrPDB Length = 69 Score = 28.1 bits (61), Expect = 0.85, Method: Composition-based stats. Identities = 8/37 (21%), Positives = 14/37 (37%) Query: 61 NVKSPGPHCAQTEVIATLKNGRKACLNPASPIVKKII 97 C+ V+ + R+ C NP V++ I Sbjct: 27 EYFYTSSKCSNLAVVFVTRRNRQVCANPEKKWVQEYI 63 >4ZLT-F nrPDB Length = 70 Score = 28.1 bits (61), Expect = 0.93, Method: Composition-based stats. Identities = 13/56 (23%), Positives = 21/56 (37%), Gaps = 2/56 (3%) Query: 45 CLQTLQGIHPKNIQSVNVKSPGPHCAQTEVIATLKNGRKACLNPASPIVKKIIEKM 100 C + I + I V C+Q VI K R+ C + V++ I + Sbjct: 13 CFSYSRKIPRQFI--VAYFETSSLCSQPGVIFLTKRNRQICADSKETWVQEYITDL 66 >1EOT-A nrPDB Length = 74 Score = 28.1 bits (61), Expect = 0.97, Method: Composition-based stats. Identities = 11/52 (21%), Positives = 22/52 (42%), Gaps = 1/52 (1%) Query: 49 LQGIHPKNIQSVNVKSPGPHCAQTEVIATLKNGRKACLNPASPIVKKIIEKM 100 + I + ++S + G C Q VI K + C +P V+ ++ + Sbjct: 15 NRKIPLQRLESYRRITSGK-CPQKAVIFKTKLAKDICADPKKKWVQDSMKYL 65 >1RYH-A nrPDB Length = 203 Score = 27.7 bits (60), Expect = 1.3, Method: Composition-based stats. Identities = 16/77 (20%), Positives = 28/77 (36%), Gaps = 7/77 (9%) Query: 25 LVAAGRRAAGASVATELRCQCLQTLQGIHPKNIQSVNVKSPGPHCAQTEVIATLKNGRKA 84 + + G+ A V C + +N+++ HC T +I G K Sbjct: 86 ITSRGKDKPIADVF----LICFSLVSPASFENVRAKWYPEVRHHCPNTPIILV---GTKL 138 Query: 85 CLNPASPIVKKIIEKML 101 L ++K+ EK L Sbjct: 139 DLRDDKDTIEKLKEKKL 155 >5CHX-A nrPDB Length = 214 Score = 27.3 bits (59), Expect = 1.7, Method: Composition-based stats. Identities = 11/36 (30%), Positives = 13/36 (36%) Query: 30 RRAAGASVATELRCQCLQTLQGIHPKNIQSVNVKSP 65 + A V EL C CL T KN + V Sbjct: 118 KVENPAEVIRELICYCLDTTAENQAKNEHHLRVVDS 153 >5HZH-A nrPDB Length = 332 Score = 26.9 bits (58), Expect = 1.9, Method: Composition-based stats. Identities = 14/63 (22%), Positives = 25/63 (39%), Gaps = 3/63 (4%) Query: 39 TELRCQCLQTLQGIHPKNIQSVNVKSPGPHCAQTEVIATLKNGRKACLNPASPIVKKIIE 98 T++ C + +N+++ HC T +I G K L ++K+ E Sbjct: 227 TDVFLICFSLVSPASFENVRAKWYPEVRHHCPNTPIILV---GTKLDLRDDKDTIEKLKE 283 Query: 99 KML 101 K L Sbjct: 284 KKL 286 >3TH5-A nrPDB Length = 204 Score = 26.9 bits (58), Expect = 1.9, Method: Composition-based stats. Identities = 14/63 (22%), Positives = 25/63 (39%), Gaps = 3/63 (4%) Query: 39 TELRCQCLQTLQGIHPKNIQSVNVKSPGPHCAQTEVIATLKNGRKACLNPASPIVKKIIE 98 T++ C + +N+++ HC T +I G K L ++K+ E Sbjct: 102 TDVFLICFSLVSPASFENVRAKWYPEVRHHCPNTPIILV---GTKLDLRDDKDTIEKLKE 158 Query: 99 KML 101 K L Sbjct: 159 KKL 161 >3RYT-C nrPDB Length = 180 Score = 26.9 bits (58), Expect = 1.9, Method: Composition-based stats. Identities = 14/63 (22%), Positives = 25/63 (39%), Gaps = 3/63 (4%) Query: 39 TELRCQCLQTLQGIHPKNIQSVNVKSPGPHCAQTEVIATLKNGRKACLNPASPIVKKIIE 98 T++ C + +N+++ HC T +I G K L ++K+ E Sbjct: 78 TDVFLICFSLVSPASFENVRAKWYPEVRHHCPNTPIILV---GTKLDLRDDKDTIEKLKE 134 Query: 99 KML 101 K L Sbjct: 135 KKL 137 >5UIU-A nrPDB Length = 323 Score = 26.9 bits (58), Expect = 1.9, Method: Composition-based stats. Identities = 11/62 (17%), Positives = 21/62 (33%) Query: 25 LVAAGRRAAGASVATELRCQCLQTLQGIHPKNIQSVNVKSPGPHCAQTEVIATLKNGRKA 84 +V G +L T + + + Q + V + H E++ +G Sbjct: 62 VVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDL 121 Query: 85 CL 86 CL Sbjct: 122 CL 123 >2WKQ-A nrPDB Length = 332 Score = 26.6 bits (57), Expect = 2.4, Method: Composition-based stats. Identities = 13/63 (20%), Positives = 24/63 (38%), Gaps = 3/63 (4%) Query: 39 TELRCQCLQTLQGIHPKNIQSVNVKSPGPHCAQTEVIATLKNGRKACLNPASPIVKKIIE 98 T++ C + ++++ HC T +I G K L ++K+ E Sbjct: 227 TDVFLICFSLVSPASFHHVRAKWYPEVRHHCPNTPIILV---GTKLDLRDDKDTIEKLKE 283 Query: 99 KML 101 K L Sbjct: 284 KKL 286 >1MC5-A nrPDB Length = 374 Score = 26.2 bits (56), Expect = 3.2, Method: Composition-based stats. Identities = 9/37 (24%), Positives = 19/37 (51%) Query: 41 LRCQCLQTLQGIHPKNIQSVNVKSPGPHCAQTEVIAT 77 ++C+ + P +I+ + V P H + ++IAT Sbjct: 6 IKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIAT 42 >1DOL-A nrPDB Length = 77 Score = 26.2 bits (56), Expect = 3.3, Method: Composition-based stats. Identities = 9/47 (19%), Positives = 18/47 (38%), Gaps = 1/47 (2%) Query: 48 TLQGIHPKNIQSVNVKSPGPHCAQTEVIATLKNGRKACLNPASPIVK 94 T + I + + S + C + VI ++ C +P V+ Sbjct: 17 TNRKISVQRLASYRRITSSK-CPKEAVIFKTIVAKEICADPKQKWVQ 62 >3MUD-A nrPDB Length = 175 Score = 25.8 bits (55), Expect = 4.4, Method: Composition-based stats. Identities = 10/32 (31%), Positives = 14/32 (43%), Gaps = 1/32 (3%) Query: 30 RRAAGASVATELRCQCLQTLQGIHPKNIQSVN 61 + A V EL C CL T + K+I + Sbjct: 118 KVENPAEVIRELICYCLDTTAK-NEKSIDDLE 148 >3S4K-A nrPDB Length = 144 Score = 25.8 bits (55), Expect = 4.8, Method: Composition-based stats. Identities = 10/27 (37%), Positives = 15/27 (55%) Query: 52 IHPKNIQSVNVKSPGPHCAQTEVIATL 78 + PK +Q V G +CA E IA++ Sbjct: 43 VRPKLLQLTGVVHGGVYCAMIESIASM 69 >3COS-A nrPDB Length = 381 Score = 25.8 bits (55), Expect = 5.0, Method: Composition-based stats. Identities = 10/37 (27%), Positives = 18/37 (48%) Query: 41 LRCQCLQTLQGIHPKNIQSVNVKSPGPHCAQTEVIAT 77 ++C+ + P I+ V V P H + ++IAT Sbjct: 9 IKCKAAIAWEAGKPLCIEEVEVAPPKAHEVRIQIIAT 45 >2XR1-A nrPDB Length = 640 Score = 25.0 bits (53), Expect = 6.8, Method: Composition-based stats. Identities = 9/27 (33%), Positives = 15/27 (55%) Query: 70 AQTEVIATLKNGRKACLNPASPIVKKI 96 + E + T KAC++ AS + KK+ Sbjct: 598 PRPERVFTEHGDEKACVDLASSVYKKL 624 >4GZU-A nrPDB Length = 501 Score = 25.0 bits (53), Expect = 7.5, Method: Composition-based stats. Identities = 8/49 (16%), Positives = 21/49 (42%), Gaps = 2/49 (4%) Query: 53 HPKNIQSVNVKSPGPHCAQTEVIATLKNGRKACLNPASPIVKKIIEKML 101 H + + + HC + E + +K C P + + K +++++ Sbjct: 112 HDEVLTELE--KATKHCKKLEAVYKEFELQKVCYLPLNTFLLKPVQRLV 158 >4GYV-A nrPDB Length = 218 Score = 25.0 bits (53), Expect = 7.5, Method: Composition-based stats. Identities = 8/49 (16%), Positives = 21/49 (42%), Gaps = 2/49 (4%) Query: 53 HPKNIQSVNVKSPGPHCAQTEVIATLKNGRKACLNPASPIVKKIIEKML 101 H + + + HC + E + +K C P + + K +++++ Sbjct: 112 HDEVLTELE--KATKHCKKLEAVYKEFELQKVCYLPLNTFLLKPVQRLV 158 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.313 0.135 0.367 Lambda K H 0.267 0.0412 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 3,442,934 Number of Sequences: 36641 Number of extensions: 101328 Number of successful extensions: 350 Number of sequences better than 10.0: 66 Number of HSP's better than 10.0 without gapping: 82 Number of HSP's successfully gapped in prelim test: 16 Number of HSP's that attempted gapping in prelim test: 256 Number of HSP's gapped (non-prelim): 99 length of query: 107 length of database: 10,336,785 effective HSP length: 73 effective length of query: 34 effective length of database: 7,661,992 effective search space: 260507728 effective search space used: 260507728 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.4 bits) S2: 53 (25.0 bits)