BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= P09172 (617 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 4ZEL-A nrPDB 1210 0.0 3MIC-A nrPDB 100 2e-21 5WM0-A nrPDB 100 3e-21 1K1Y-A nrPDB 30 2.3 5Z96-A nrPDB 30 3.2 6D6Q-K nrPDB 29 4.6 6G1K-A nrPDB 29 4.7 >4ZEL-A nrPDB Length = 578 Score = 1210 bits (3131), Expect = 0.0, Method: Compositional matrix adjust. Identities = 578/578 (100%), Positives = 578/578 (100%) Query: 40 SAPRESPLPYHIPLDPEGSLELSWNVSYTQEAIHFQLLVRRLKAGVLFGMSDRGELENAD 99 SAPRESPLPYHIPLDPEGSLELSWNVSYTQEAIHFQLLVRRLKAGVLFGMSDRGELENAD Sbjct: 1 SAPRESPLPYHIPLDPEGSLELSWNVSYTQEAIHFQLLVRRLKAGVLFGMSDRGELENAD 60 Query: 100 LVVLWTDGDTAYFADAWSDQKGQIHLDPQQDYQLLQVQRTPEGLTLLFKRPFGTCDPKDY 159 LVVLWTDGDTAYFADAWSDQKGQIHLDPQQDYQLLQVQRTPEGLTLLFKRPFGTCDPKDY Sbjct: 61 LVVLWTDGDTAYFADAWSDQKGQIHLDPQQDYQLLQVQRTPEGLTLLFKRPFGTCDPKDY 120 Query: 160 LIEDGTVHLVYGILEEPFRSLEAINGSGLQMGLQRVQLLKPNIPEPELPSDACTMEVQAP 219 LIEDGTVHLVYGILEEPFRSLEAINGSGLQMGLQRVQLLKPNIPEPELPSDACTMEVQAP Sbjct: 121 LIEDGTVHLVYGILEEPFRSLEAINGSGLQMGLQRVQLLKPNIPEPELPSDACTMEVQAP 180 Query: 220 NIQIPSQETTYWCYIKELPKGFSRHHIIKYEPIVTKGNEALVHHMEVFQCAPEMDSVPHF 279 NIQIPSQETTYWCYIKELPKGFSRHHIIKYEPIVTKGNEALVHHMEVFQCAPEMDSVPHF Sbjct: 181 NIQIPSQETTYWCYIKELPKGFSRHHIIKYEPIVTKGNEALVHHMEVFQCAPEMDSVPHF 240 Query: 280 SGPCDSKMKPDRLNYCRHVLAAWALGAKAFYYPEEAGLAFGGPGSSRYLRLEVHYHNPLV 339 SGPCDSKMKPDRLNYCRHVLAAWALGAKAFYYPEEAGLAFGGPGSSRYLRLEVHYHNPLV Sbjct: 241 SGPCDSKMKPDRLNYCRHVLAAWALGAKAFYYPEEAGLAFGGPGSSRYLRLEVHYHNPLV 300 Query: 340 IEGRNDSSGIRLYYTAKLRRFNAGIMELGLVYTPVMAIPPRETAFILTGYCTDKCTQLAL 399 IEGRNDSSGIRLYYTAKLRRFNAGIMELGLVYTPVMAIPPRETAFILTGYCTDKCTQLAL Sbjct: 301 IEGRNDSSGIRLYYTAKLRRFNAGIMELGLVYTPVMAIPPRETAFILTGYCTDKCTQLAL 360 Query: 400 PPSGIHIFASQLHTHLTGRKVVTVLVRDGREWEIVNQDNHYSPHFQEIRMLKKVVSVHPG 459 PPSGIHIFASQLHTHLTGRKVVTVLVRDGREWEIVNQDNHYSPHFQEIRMLKKVVSVHPG Sbjct: 361 PPSGIHIFASQLHTHLTGRKVVTVLVRDGREWEIVNQDNHYSPHFQEIRMLKKVVSVHPG 420 Query: 460 DVLITSCTYNTEDRELATVGGFGILEEMCVNYVHYYPQTQLELCKSAVDAGFLQKYFHLI 519 DVLITSCTYNTEDRELATVGGFGILEEMCVNYVHYYPQTQLELCKSAVDAGFLQKYFHLI Sbjct: 421 DVLITSCTYNTEDRELATVGGFGILEEMCVNYVHYYPQTQLELCKSAVDAGFLQKYFHLI 480 Query: 520 NRFNNEDVCTCPQASVSQQFTSVPWNSFNRDVLKALYSFAPISMHCNKSSAVRFQGEWNL 579 NRFNNEDVCTCPQASVSQQFTSVPWNSFNRDVLKALYSFAPISMHCNKSSAVRFQGEWNL Sbjct: 481 NRFNNEDVCTCPQASVSQQFTSVPWNSFNRDVLKALYSFAPISMHCNKSSAVRFQGEWNL 540 Query: 580 QPLPKVISTLEEPTPQCPTSQGRSPAGPTVVSIGGGKG 617 QPLPKVISTLEEPTPQCPTSQGRSPAGPTVVSIGGGKG Sbjct: 541 QPLPKVISTLEEPTPQCPTSQGRSPAGPTVVSIGGGKG 578 >3MIC-A nrPDB Length = 314 Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 88/304 (28%), Positives = 136/304 (44%), Gaps = 33/304 (10%) Query: 205 PELPSDAC--TMEVQAPNIQIPSQETTYWCYIKELPKGFSRHHIIKYEPIVTKGNEALVH 262 P P DA ++++ P + P + TY+C LP +I ++P + + VH Sbjct: 11 PVTPLDASDFALDIRMPGVT-PKESDTYFCMSMRLPVD-EEAFVIDFKP---RASMDTVH 65 Query: 263 HMEVFQCAPEMDSVPHFSGP---CDSKMKPDRLNYCRHVLAAWALGAKAFYYPEEAGLAF 319 HM +F C ++P +G CD D+ N +L AWA A P+ G Sbjct: 66 HMLLFGC-----NMPSSTGSYWFCDEGTCTDKAN----ILYAWARNAPPTRLPKGVGFRV 116 Query: 320 GGPGSSRYLRLEVHYHNPLVI-EGRNDSSGIRLYYTAKLRRFNAGIMELGLVYTPVMAIP 378 GG S+Y L+VHY + + D SG+ ++ T + AG+ + V T IP Sbjct: 117 GGETGSKYFVLQVHYGDISAFRDNHKDCSGVSVHLTRVPQPLIAGMYLMMSVDT---VIP 173 Query: 379 PRETAFILTGYCTDKCTQLALPPSGIHIFASQLHTHLTGRKVVTVLVRDGREWEIVNQDN 438 P E D Q + P +H+FA ++HTH G+ V VR+G +W ++ + N Sbjct: 174 PGEKVV-----NADISCQYKMYP--MHVFAYRVHTHHLGKVVSGYRVRNG-QWTLIGRQN 225 Query: 439 HYSPHFQEIRMLKKVVSVHPGDVLITSCTYNTEDRELATVGGFGILEEMCVNYVHYYPQT 498 P Q ++ V V GD+L C + E R AT G +EMC Y+ YY + Sbjct: 226 PQLP--QAFYPVEHPVDVTFGDILAARCVFTGEGRTEATHIGGTSSDEMCNLYIMYYMEA 283 Query: 499 QLEL 502 + L Sbjct: 284 KYAL 287 >5WM0-A nrPDB Length = 976 Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 88/304 (28%), Positives = 136/304 (44%), Gaps = 33/304 (10%) Query: 205 PELPSDAC--TMEVQAPNIQIPSQETTYWCYIKELPKGFSRHHIIKYEPIVTKGNEALVH 262 P P DA ++++ P + P + TY+C LP +I ++P + + VH Sbjct: 53 PVTPLDASDFALDIRMPGV-TPKESDTYFCMSMRLPVD-EEAFVIDFKP---RASMDTVH 107 Query: 263 HMEVFQCAPEMDSVPHFSGP---CDSKMKPDRLNYCRHVLAAWALGAKAFYYPEEAGLAF 319 HM +F C ++P +G CD D+ N +L AWA A P+ G Sbjct: 108 HMLLFGC-----NMPSSTGSYWFCDEGTCTDKAN----ILYAWARNAPPTRLPKGVGFRV 158 Query: 320 GGPGSSRYLRLEVHYHNPLVI-EGRNDSSGIRLYYTAKLRRFNAGIMELGLVYTPVMAIP 378 GG S+Y L+VHY + + D SG+ ++ T + AG+ + V T IP Sbjct: 159 GGETGSKYFVLQVHYGDISAFRDNHKDCSGVSVHLTRVPQPLIAGMYLMMSVDT---VIP 215 Query: 379 PRETAFILTGYCTDKCTQLALPPSGIHIFASQLHTHLTGRKVVTVLVRDGREWEIVNQDN 438 P E D Q + P +H+FA ++HTH G+ V VR+G +W ++ + N Sbjct: 216 PGEKVV-----NADISCQYKMYP--MHVFAYRVHTHHLGKVVSGYRVRNG-QWTLIGRQN 267 Query: 439 HYSPHFQEIRMLKKVVSVHPGDVLITSCTYNTEDRELATVGGFGILEEMCVNYVHYYPQT 498 P Q ++ V V GD+L C + E R AT G +EMC Y+ YY + Sbjct: 268 PQLP--QAFYPVEHPVDVTFGDILAARCVFTGEGRTEATHIGGTSSDEMCNLYIMYYMEA 325 Query: 499 QLEL 502 + L Sbjct: 326 KYAL 329 >1K1Y-A nrPDB Length = 659 Score = 30.4 bits (67), Expect = 2.3, Method: Compositional matrix adjust. Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 9/74 (12%) Query: 264 MEVFQCAPEMDSVPHFSGPC---DSKMKPDRLNYCRHVLAAWALG--AKAFYYPEEAGLA 318 ME+ + PEM HFSGP + KPD L+ R ++ L FY P A + Sbjct: 35 MEILEEFPEMKVNVHFSGPLLEWIEENKPDYLDLLRSLIKRGQLEIVVAGFYEPVLAAI- 93 Query: 319 FGGPGSSRYLRLEV 332 P R +++E+ Sbjct: 94 ---PKEDRLVQIEM 104 >5Z96-A nrPDB Length = 755 Score = 30.0 bits (66), Expect = 3.2, Method: Compositional matrix adjust. Identities = 22/73 (30%), Positives = 31/73 (42%), Gaps = 4/73 (5%) Query: 528 CTCPQASVSQQFTSVPWNSFNRDVLKALYSFAPISMHCNKSSAVRFQGEWNLQPLPKV-- 585 C C + S S+ + ++ KAL S + I++ FQ W LQ L KV Sbjct: 176 CNCVECVSSSDVDSLRHSRSRLNIYKALASPSLIALSSEDPFLTAFQLSWELQELSKVEN 235 Query: 586 --ISTLEEPTPQC 596 S EE + QC Sbjct: 236 EFKSEYEELSRQC 248 >6D6Q-K nrPDB Length = 960 Score = 29.3 bits (64), Expect = 4.6, Method: Compositional matrix adjust. Identities = 12/37 (32%), Positives = 21/37 (56%) Query: 183 INGSGLQMGLQRVQLLKPNIPEPELPSDACTMEVQAP 219 ++ S LQ R+ L++P IP +P+D M++ P Sbjct: 915 LDSSNLQHQKIRMSLVEPQIPGISIPTDTSNMDLNGP 951 >6G1K-A nrPDB Length = 921 Score = 29.3 bits (64), Expect = 4.7, Method: Compositional matrix adjust. Identities = 21/73 (28%), Positives = 31/73 (42%), Gaps = 4/73 (5%) Query: 528 CTCPQASVSQQFTSVPWNSFNRDVLKALYSFAPISMHCNKSSAVRFQGEWNLQPLPKVIS 587 C C + S S+ + ++ KAL S + I++ FQ W LQ L KV + Sbjct: 176 CNCVECVSSSDVDSLRHSRSRLNIYKALASPSLIALSSEDPFLTAFQLSWELQELSKVEN 235 Query: 588 TL----EEPTPQC 596 EE + QC Sbjct: 236 EFKAEYEELSHQC 248 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 4ZEL-A nrPDB 1153 0.0 5WM0-A nrPDB 425 e-119 3MIC-A nrPDB 425 e-119 Sequences not found previously or not previously below threshold: 6D6Q-K nrPDB 31 1.5 5Z96-A nrPDB 31 1.6 6G1K-A nrPDB 30 3.1 3VR3-D nrPDB 30 3.2 CONVERGED! >4ZEL-A nrPDB Length = 578 Score = 1153 bits (2982), Expect = 0.0, Method: Composition-based stats. Identities = 578/578 (100%), Positives = 578/578 (100%) Query: 40 SAPRESPLPYHIPLDPEGSLELSWNVSYTQEAIHFQLLVRRLKAGVLFGMSDRGELENAD 99 SAPRESPLPYHIPLDPEGSLELSWNVSYTQEAIHFQLLVRRLKAGVLFGMSDRGELENAD Sbjct: 1 SAPRESPLPYHIPLDPEGSLELSWNVSYTQEAIHFQLLVRRLKAGVLFGMSDRGELENAD 60 Query: 100 LVVLWTDGDTAYFADAWSDQKGQIHLDPQQDYQLLQVQRTPEGLTLLFKRPFGTCDPKDY 159 LVVLWTDGDTAYFADAWSDQKGQIHLDPQQDYQLLQVQRTPEGLTLLFKRPFGTCDPKDY Sbjct: 61 LVVLWTDGDTAYFADAWSDQKGQIHLDPQQDYQLLQVQRTPEGLTLLFKRPFGTCDPKDY 120 Query: 160 LIEDGTVHLVYGILEEPFRSLEAINGSGLQMGLQRVQLLKPNIPEPELPSDACTMEVQAP 219 LIEDGTVHLVYGILEEPFRSLEAINGSGLQMGLQRVQLLKPNIPEPELPSDACTMEVQAP Sbjct: 121 LIEDGTVHLVYGILEEPFRSLEAINGSGLQMGLQRVQLLKPNIPEPELPSDACTMEVQAP 180 Query: 220 NIQIPSQETTYWCYIKELPKGFSRHHIIKYEPIVTKGNEALVHHMEVFQCAPEMDSVPHF 279 NIQIPSQETTYWCYIKELPKGFSRHHIIKYEPIVTKGNEALVHHMEVFQCAPEMDSVPHF Sbjct: 181 NIQIPSQETTYWCYIKELPKGFSRHHIIKYEPIVTKGNEALVHHMEVFQCAPEMDSVPHF 240 Query: 280 SGPCDSKMKPDRLNYCRHVLAAWALGAKAFYYPEEAGLAFGGPGSSRYLRLEVHYHNPLV 339 SGPCDSKMKPDRLNYCRHVLAAWALGAKAFYYPEEAGLAFGGPGSSRYLRLEVHYHNPLV Sbjct: 241 SGPCDSKMKPDRLNYCRHVLAAWALGAKAFYYPEEAGLAFGGPGSSRYLRLEVHYHNPLV 300 Query: 340 IEGRNDSSGIRLYYTAKLRRFNAGIMELGLVYTPVMAIPPRETAFILTGYCTDKCTQLAL 399 IEGRNDSSGIRLYYTAKLRRFNAGIMELGLVYTPVMAIPPRETAFILTGYCTDKCTQLAL Sbjct: 301 IEGRNDSSGIRLYYTAKLRRFNAGIMELGLVYTPVMAIPPRETAFILTGYCTDKCTQLAL 360 Query: 400 PPSGIHIFASQLHTHLTGRKVVTVLVRDGREWEIVNQDNHYSPHFQEIRMLKKVVSVHPG 459 PPSGIHIFASQLHTHLTGRKVVTVLVRDGREWEIVNQDNHYSPHFQEIRMLKKVVSVHPG Sbjct: 361 PPSGIHIFASQLHTHLTGRKVVTVLVRDGREWEIVNQDNHYSPHFQEIRMLKKVVSVHPG 420 Query: 460 DVLITSCTYNTEDRELATVGGFGILEEMCVNYVHYYPQTQLELCKSAVDAGFLQKYFHLI 519 DVLITSCTYNTEDRELATVGGFGILEEMCVNYVHYYPQTQLELCKSAVDAGFLQKYFHLI Sbjct: 421 DVLITSCTYNTEDRELATVGGFGILEEMCVNYVHYYPQTQLELCKSAVDAGFLQKYFHLI 480 Query: 520 NRFNNEDVCTCPQASVSQQFTSVPWNSFNRDVLKALYSFAPISMHCNKSSAVRFQGEWNL 579 NRFNNEDVCTCPQASVSQQFTSVPWNSFNRDVLKALYSFAPISMHCNKSSAVRFQGEWNL Sbjct: 481 NRFNNEDVCTCPQASVSQQFTSVPWNSFNRDVLKALYSFAPISMHCNKSSAVRFQGEWNL 540 Query: 580 QPLPKVISTLEEPTPQCPTSQGRSPAGPTVVSIGGGKG 617 QPLPKVISTLEEPTPQCPTSQGRSPAGPTVVSIGGGKG Sbjct: 541 QPLPKVISTLEEPTPQCPTSQGRSPAGPTVVSIGGGKG 578 >5WM0-A nrPDB Length = 976 Score = 425 bits (1093), Expect = e-119, Method: Composition-based stats. Identities = 88/304 (28%), Positives = 136/304 (44%), Gaps = 33/304 (10%) Query: 205 PELPSDAC--TMEVQAPNIQIPSQETTYWCYIKELPKGFSRHHIIKYEPIVTKGNEALVH 262 P P DA ++++ P + P + TY+C LP +I ++P + + VH Sbjct: 53 PVTPLDASDFALDIRMPGVT-PKESDTYFCMSMRLPVD-EEAFVIDFKP---RASMDTVH 107 Query: 263 HMEVFQCAPEMDSVPHFSGP---CDSKMKPDRLNYCRHVLAAWALGAKAFYYPEEAGLAF 319 HM +F C ++P +G CD D+ N +L AWA A P+ G Sbjct: 108 HMLLFGC-----NMPSSTGSYWFCDEGTCTDKAN----ILYAWARNAPPTRLPKGVGFRV 158 Query: 320 GGPGSSRYLRLEVHYHNPLVI-EGRNDSSGIRLYYTAKLRRFNAGIMELGLVYTPVMAIP 378 GG S+Y L+VHY + + D SG+ ++ T + AG+ + V T IP Sbjct: 159 GGETGSKYFVLQVHYGDISAFRDNHKDCSGVSVHLTRVPQPLIAGMYLMMSVDT---VIP 215 Query: 379 PRETAFILTGYCTDKCTQLALPPSGIHIFASQLHTHLTGRKVVTVLVRDGREWEIVNQDN 438 P E D Q + P +H+FA ++HTH G+ V VR+G +W ++ + N Sbjct: 216 PGEKVV-----NADISCQYKMYP--MHVFAYRVHTHHLGKVVSGYRVRNG-QWTLIGRQN 267 Query: 439 HYSPHFQEIRMLKKVVSVHPGDVLITSCTYNTEDRELATVGGFGILEEMCVNYVHYYPQT 498 P Q ++ V V GD+L C + E R AT G +EMC Y+ YY + Sbjct: 268 PQLP--QAFYPVEHPVDVTFGDILAARCVFTGEGRTEATHIGGTSSDEMCNLYIMYYMEA 325 Query: 499 QLEL 502 + L Sbjct: 326 KYAL 329 >3MIC-A nrPDB Length = 314 Score = 425 bits (1093), Expect = e-119, Method: Composition-based stats. Identities = 88/304 (28%), Positives = 136/304 (44%), Gaps = 33/304 (10%) Query: 205 PELPSDAC--TMEVQAPNIQIPSQETTYWCYIKELPKGFSRHHIIKYEPIVTKGNEALVH 262 P P DA ++++ P + P + TY+C LP +I ++P + + VH Sbjct: 11 PVTPLDASDFALDIRMPGVT-PKESDTYFCMSMRLPVD-EEAFVIDFKP---RASMDTVH 65 Query: 263 HMEVFQCAPEMDSVPHFSGP---CDSKMKPDRLNYCRHVLAAWALGAKAFYYPEEAGLAF 319 HM +F C ++P +G CD D+ N +L AWA A P+ G Sbjct: 66 HMLLFGC-----NMPSSTGSYWFCDEGTCTDKAN----ILYAWARNAPPTRLPKGVGFRV 116 Query: 320 GGPGSSRYLRLEVHYHNPLVI-EGRNDSSGIRLYYTAKLRRFNAGIMELGLVYTPVMAIP 378 GG S+Y L+VHY + + D SG+ ++ T + AG+ + V T IP Sbjct: 117 GGETGSKYFVLQVHYGDISAFRDNHKDCSGVSVHLTRVPQPLIAGMYLMMSVDT---VIP 173 Query: 379 PRETAFILTGYCTDKCTQLALPPSGIHIFASQLHTHLTGRKVVTVLVRDGREWEIVNQDN 438 P E D Q + P +H+FA ++HTH G+ V VR+G +W ++ + N Sbjct: 174 PGEKVV-----NADISCQYKMYP--MHVFAYRVHTHHLGKVVSGYRVRNG-QWTLIGRQN 225 Query: 439 HYSPHFQEIRMLKKVVSVHPGDVLITSCTYNTEDRELATVGGFGILEEMCVNYVHYYPQT 498 P Q ++ V V GD+L C + E R AT G +EMC Y+ YY + Sbjct: 226 PQLP--QAFYPVEHPVDVTFGDILAARCVFTGEGRTEATHIGGTSSDEMCNLYIMYYMEA 283 Query: 499 QLEL 502 + L Sbjct: 284 KYAL 287 >6D6Q-K nrPDB Length = 960 Score = 31.2 bits (69), Expect = 1.5, Method: Composition-based stats. Identities = 12/37 (32%), Positives = 21/37 (56%) Query: 183 INGSGLQMGLQRVQLLKPNIPEPELPSDACTMEVQAP 219 ++ S LQ R+ L++P IP +P+D M++ P Sbjct: 915 LDSSNLQHQKIRMSLVEPQIPGISIPTDTSNMDLNGP 951 >5Z96-A nrPDB Length = 755 Score = 30.8 bits (68), Expect = 1.6, Method: Composition-based stats. Identities = 22/73 (30%), Positives = 31/73 (42%), Gaps = 4/73 (5%) Query: 528 CTCPQASVSQQFTSVPWNSFNRDVLKALYSFAPISMHCNKSSAVRFQGEWNLQPLPKV-- 585 C C + S S+ + ++ KAL S + I++ FQ W LQ L KV Sbjct: 176 CNCVECVSSSDVDSLRHSRSRLNIYKALASPSLIALSSEDPFLTAFQLSWELQELSKVEN 235 Query: 586 --ISTLEEPTPQC 596 S EE + QC Sbjct: 236 EFKSEYEELSRQC 248 >6G1K-A nrPDB Length = 921 Score = 30.1 bits (66), Expect = 3.1, Method: Composition-based stats. Identities = 21/73 (28%), Positives = 31/73 (42%), Gaps = 4/73 (5%) Query: 528 CTCPQASVSQQFTSVPWNSFNRDVLKALYSFAPISMHCNKSSAVRFQGEWNLQPLPKVIS 587 C C + S S+ + ++ KAL S + I++ FQ W LQ L KV + Sbjct: 176 CNCVECVSSSDVDSLRHSRSRLNIYKALASPSLIALSSEDPFLTAFQLSWELQELSKVEN 235 Query: 588 TL----EEPTPQC 596 EE + QC Sbjct: 236 EFKAEYEELSHQC 248 >3VR3-D nrPDB Length = 465 Score = 30.1 bits (66), Expect = 3.2, Method: Composition-based stats. Identities = 19/80 (23%), Positives = 30/80 (37%), Gaps = 5/80 (6%) Query: 234 IKELPKGFSRHHIIKYEPIVTKGNEALVHHMEVFQCAPEMDSVPHFS-----GPCDSKMK 288 I +P+ H I +T+G L + P +D +P S G K + Sbjct: 310 ILTMPEDDKTHPIPDLTGYITEGQIILTRELYKSGIQPPIDVLPSLSRLKDKGTGAGKTR 369 Query: 289 PDRLNYCRHVLAAWALGAKA 308 D + AA+A G +A Sbjct: 370 EDHAATMNQLFAAYAQGKQA 389 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.317 0.132 0.394 Lambda K H 0.267 0.0404 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 27,081,897 Number of Sequences: 36641 Number of extensions: 1177610 Number of successful extensions: 2462 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 13 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 2422 Number of HSP's gapped (non-prelim): 16 length of query: 617 length of database: 10,336,785 effective HSP length: 103 effective length of query: 514 effective length of database: 6,562,762 effective search space: 3373259668 effective search space used: 3373259668 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 62 (28.5 bits)