BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.


Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= P09148
         (348 letters)

Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 
           36,641 sequences; 10,336,785 total letters

Searching..................................................done


Results from round 1


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

1HXP-A nrPDB                                                          730   0.0  
6GQD-A nrPDB                                                          414   e-116
2Q4H-A nrPDB                                                           99   2e-21
5NNZ-B nrPDB                                                           33   0.13 
1Y23-A nrPDB                                                           32   0.56 
1EMS-A nrPDB                                                           31   0.76 
6IQ1-A nrPDB                                                           29   2.4  

>1HXP-A nrPDB
          Length = 348

 Score =  730 bits (1884), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 347/348 (99%), Positives = 348/348 (100%)

Query: 1   MTQFNPVDHPHRRYNPLTGQWILVSPHRAKRPWQGAQETPAKQVLPAHDPDCFLCAGNVR 60
           MTQFNPVDHPHRRYNPLTGQWILVSPHRAKRPW+GAQETPAKQVLPAHDPDCFLCAGNVR
Sbjct: 1   MTQFNPVDHPHRRYNPLTGQWILVSPHRAKRPWEGAQETPAKQVLPAHDPDCFLCAGNVR 60

Query: 61  VTGDKNPDYTGTYVFTNDFAALMSDTPDAPESHDPLMRCQSARGTSRVICFSPDHSKTLP 120
           VTGDKNPDYTGTYVFTNDFAALMSDTPDAPESHDPLMRCQSARGTSRVICFSPDHSKTLP
Sbjct: 61  VTGDKNPDYTGTYVFTNDFAALMSDTPDAPESHDPLMRCQSARGTSRVICFSPDHSKTLP 120

Query: 121 ELSVAALTEIVKTWQEQTAELGKTYPWVQVFENKGAAMGCSNPHPHGQIWANSFLPNEAE 180
           ELSVAALTEIVKTWQEQTAELGKTYPWVQVFENKGAAMGCSNPHPHGQIWANSFLPNEAE
Sbjct: 121 ELSVAALTEIVKTWQEQTAELGKTYPWVQVFENKGAAMGCSNPHPHGQIWANSFLPNEAE 180

Query: 181 REDRLQKEYFAEQKSPMLVDYVQRELADGSRTVVETEHWLAVVPYWAAWPFETLLLPKAH 240
           REDRLQKEYFAEQKSPMLVDYVQRELADGSRTVVETEHWLAVVPYWAAWPFETLLLPKAH
Sbjct: 181 REDRLQKEYFAEQKSPMLVDYVQRELADGSRTVVETEHWLAVVPYWAAWPFETLLLPKAH 240

Query: 241 VLRITDLTDAQRSDLALALKKLTSRYDNLFQCSFPYSMGWHGAPFNGEENQHWQLHAHFY 300
           VLRITDLTDAQRSDLALALKKLTSRYDNLFQCSFPYSMGWHGAPFNGEENQHWQLHAHFY
Sbjct: 241 VLRITDLTDAQRSDLALALKKLTSRYDNLFQCSFPYSMGWHGAPFNGEENQHWQLHAHFY 300

Query: 301 PPLLRSATVRKFMVGYEMLAETQRDLTAEQAAERLRAVSDIHFRESGV 348
           PPLLRSATVRKFMVGYEMLAETQRDLTAEQAAERLRAVSDIHFRESGV
Sbjct: 301 PPLLRSATVRKFMVGYEMLAETQRDLTAEQAAERLRAVSDIHFRESGV 348


>6GQD-A nrPDB
          Length = 380

 Score =  414 bits (1064), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 195/345 (56%), Positives = 244/345 (70%), Gaps = 3/345 (0%)

Query: 2   TQFNPVDHPHRRYNPLTGQWILVSPHRAKRPWQGAQETPAKQVLPAHDPDCFLCAGNVRV 61
           T F   DH H RYNPL  +W+LVS HR KRPWQG  E    + +P HDP   LC G +R 
Sbjct: 23  TPFLANDHQHIRYNPLQDEWVLVSAHRMKRPWQGQVEPQLLKTVPRHDPLNPLCPGAIRA 82

Query: 62  TGDKNPDYTGTYVFTNDFAALMSDTPDAPESHDPLMRCQSARGTSRVICFSPDHSKTLPE 121
            G+ NP Y  T++F NDF AL  D P    S  PL + +SARG  +V+CF P    TLP 
Sbjct: 83  NGEVNPQYDSTFLFDNDFPALQPDAPSPGPSDHPLFQAKSARGVCKVMCFHPWSDVTLPL 142

Query: 122 LSVAALTEIVKTWQEQTAELGKTYPWVQVFENKGAAMGCSNPHPHGQIWANSFLPNEAER 181
           +SV  +  +V  W   T ELG  YPWVQ+FENKGA MGCSNPHPH Q+WA+SFLP+ A+R
Sbjct: 143 MSVPEIRAVVDAWASVTEELGAQYPWVQIFENKGAMMGCSNPHPHCQVWASSFLPDIAQR 202

Query: 182 EDRLQKEYFAEQKSPMLVDYVQRELADGSRTVVETEHWLAVVPYWAAWPFETLLLPKAHV 241
           E+R Q+ Y ++   P+L++Y ++EL    R V+ +EHWL +VP+WA WP++TLLLP+ HV
Sbjct: 203 EERSQQAYKSQHGEPLLMEYSRQELLRKERLVLTSEHWLVLVPFWATWPYQTLLLPRRHV 262

Query: 242 LRITDLTDAQRSDLALALKKLTSRYDNLFQCSFPYSMGWHGAPFNGEEN---QHWQLHAH 298
            R+ +LT A+R DLA  +KKL ++YDNLF+ SFPYSMGWHGAP   E      HWQLHAH
Sbjct: 263 RRLPELTPAERDDLASIMKKLLTKYDNLFETSFPYSMGWHGAPTGSEAGANWDHWQLHAH 322

Query: 299 FYPPLLRSATVRKFMVGYEMLAETQRDLTAEQAAERLRAVSDIHF 343
           +YPPLLRSATVRKFMVGYEMLA+ QRDLT EQAAERLRA+ ++H+
Sbjct: 323 YYPPLLRSATVRKFMVGYEMLAQAQRDLTPEQAAERLRALPEVHY 367


>2Q4H-A nrPDB
          Length = 351

 Score = 99.4 bits (246), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 79/300 (26%), Positives = 133/300 (44%), Gaps = 23/300 (7%)

Query: 10  PHRRYNPLTGQWILVSPHRAKRPWQGAQETPAK-QVLPAHDPDCF----LCAGNVRVTGD 64
           P  R +P+T +W++ SP RAKRP     ++P      P+  P C      CA  +    D
Sbjct: 23  PELRKDPVTNRWVIFSPARAKRPTDFKSKSPQNPNPKPSSCPFCIGREQECAPELFRVPD 82

Query: 65  KNPDYTGTYVFTNDFAAL---MSDTPDAPESHDPLMRCQSARGTSRVICFSPDHSKTLPE 121
            +P++    V  N + AL   +      PE+     R     G   V+  SP HS  L +
Sbjct: 83  HDPNWK-LRVIENLYPALSRNLETQSTQPETG--TSRTIVGFGFHDVVIESPVHSIQLSD 139

Query: 122 LSVAALTEIVKTWQEQTAELGK--TYPWVQVFENKGAAMGCSNPHPHGQIWANSFLPNEA 179
           +    + +I+  ++++  ++ +  +  ++QVF+N+GA+ G S  H H Q+ A   +P   
Sbjct: 140 IDPVGIGDILIAYKKRINQIAQHDSINYIQVFKNQGASAGASMSHSHSQMMALPVVPPTV 199

Query: 180 EREDRLQKEYFAEQKSPMLVDYVQRELADGSRTVVETEHWLAVVPYWAAWPFETLLLPKA 239
                  K+YF E     L +   +        + E+ H+++V P+ A +PFE  ++PK 
Sbjct: 200 SSRLDGTKDYFEETGKCCLCEAKSKHFV-----IDESSHFVSVAPFAATYPFEIWIIPKD 254

Query: 240 HVLRITDLTDAQRSDLALALKKLTSRYDNLFQCSFPYSMGWHGAPFNGEENQ----HWQL 295
           H      L D +  DL   LK +  +         PY+   H +P    E+Q    HW L
Sbjct: 255 HSSHFHHLDDVKAVDLGGLLKLMLQKIAKQLN-DPPYNYMIHTSPLKVTESQLPYTHWFL 313


>5NNZ-B nrPDB
          Length = 415

 Score = 33.5 bits (75), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 5/57 (8%)

Query: 14  YNPLTGQWILVSPHRAKRPWQGAQETPAKQVLPAHDPDCFLCA----GNVRVTGDKN 66
           +NP     +  S  +  R W  AQ     QVL  H  + F CA    GN+ +TG K+
Sbjct: 353 FNPQGNHLLTGSSDKTARIWD-AQTGQCLQVLEGHTDEIFSCAFNYKGNIVITGSKD 408


>1Y23-A nrPDB
          Length = 145

 Score = 31.6 bits (70), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 23/91 (25%), Positives = 37/91 (40%), Gaps = 5/91 (5%)

Query: 210 SRTVVETEHWLAVVPYWAAWPFETLLLPKAHVLRITDLTDAQRSDLALALKKLTSRYDNL 269
           S  V E EH LA +         TL++PK H+  + + TD        A+ K+     + 
Sbjct: 19  SAKVYEDEHVLAFLDISQVTKGHTLVIPKTHIENVYEFTDELAKQYFHAVPKIARAIRDE 78

Query: 270 FQCSFPYSMGWHGAPFNGEENQHWQLHAHFY 300
           F+      +G +    NGE+      H H +
Sbjct: 79  FE-----PIGLNTLNNNGEKAGQSVFHYHMH 104


>1EMS-A nrPDB
          Length = 440

 Score = 31.2 bits (69), Expect = 0.76,   Method: Compositional matrix adjust.
 Identities = 15/30 (50%), Positives = 21/30 (70%)

Query: 233 TLLLPKAHVLRITDLTDAQRSDLALALKKL 262
            L+ PK  V R+TDLTDA+ +DL +  KK+
Sbjct: 332 VLVSPKRVVPRLTDLTDAETADLFIVAKKV 361


>6IQ1-A nrPDB
          Length = 160

 Score = 29.3 bits (64), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 1/68 (1%)

Query: 233 TLLLPKAHVLRITDLTDAQRSDLALALKKLTSRYDNLFQCSFPYSMGWHGAPFNGEENQH 292
            L++PK H  ++ ++ D   SD+   +KKLT +   L + + P   G++    NG     
Sbjct: 42  VLIIPKHHGAKLHNIPDDYLSDILPVVKKLT-KVLKLDENNTPEGEGYNVLQNNGRIAHQ 100

Query: 293 WQLHAHFY 300
              H HF+
Sbjct: 101 VVDHVHFH 108


Searching..................................................done


Results from round 2


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value
Sequences used in model and found again:

1HXP-A nrPDB                                                          614   e-176
6GQD-A nrPDB                                                          544   e-155
2Q4H-A nrPDB                                                          382   e-107

Sequences not found previously or not previously below threshold:

6IQ1-A nrPDB                                                           39   0.002
1FIT-A nrPDB                                                           36   0.024
3WO5-A nrPDB                                                           34   0.11 
3KSV-A nrPDB                                                           33   0.20 
1Y23-A nrPDB                                                           32   0.37 
1EMS-A nrPDB                                                           32   0.42 
2YKV-A nrPDB                                                           32   0.48 
3CT9-A nrPDB                                                           31   0.79 
3OJ7-A nrPDB                                                           30   1.4  
1X7P-A nrPDB                                                           30   2.0  
3NWI-A nrPDB                                                           29   3.0  
1ATG-A nrPDB                                                           28   5.3  
1UFA-A nrPDB                                                           27   9.2  


CONVERGED!
>1HXP-A nrPDB
          Length = 348

 Score =  614 bits (1582), Expect = e-176,   Method: Composition-based stats.
 Identities = 347/348 (99%), Positives = 348/348 (100%)

Query: 1   MTQFNPVDHPHRRYNPLTGQWILVSPHRAKRPWQGAQETPAKQVLPAHDPDCFLCAGNVR 60
           MTQFNPVDHPHRRYNPLTGQWILVSPHRAKRPW+GAQETPAKQVLPAHDPDCFLCAGNVR
Sbjct: 1   MTQFNPVDHPHRRYNPLTGQWILVSPHRAKRPWEGAQETPAKQVLPAHDPDCFLCAGNVR 60

Query: 61  VTGDKNPDYTGTYVFTNDFAALMSDTPDAPESHDPLMRCQSARGTSRVICFSPDHSKTLP 120
           VTGDKNPDYTGTYVFTNDFAALMSDTPDAPESHDPLMRCQSARGTSRVICFSPDHSKTLP
Sbjct: 61  VTGDKNPDYTGTYVFTNDFAALMSDTPDAPESHDPLMRCQSARGTSRVICFSPDHSKTLP 120

Query: 121 ELSVAALTEIVKTWQEQTAELGKTYPWVQVFENKGAAMGCSNPHPHGQIWANSFLPNEAE 180
           ELSVAALTEIVKTWQEQTAELGKTYPWVQVFENKGAAMGCSNPHPHGQIWANSFLPNEAE
Sbjct: 121 ELSVAALTEIVKTWQEQTAELGKTYPWVQVFENKGAAMGCSNPHPHGQIWANSFLPNEAE 180

Query: 181 REDRLQKEYFAEQKSPMLVDYVQRELADGSRTVVETEHWLAVVPYWAAWPFETLLLPKAH 240
           REDRLQKEYFAEQKSPMLVDYVQRELADGSRTVVETEHWLAVVPYWAAWPFETLLLPKAH
Sbjct: 181 REDRLQKEYFAEQKSPMLVDYVQRELADGSRTVVETEHWLAVVPYWAAWPFETLLLPKAH 240

Query: 241 VLRITDLTDAQRSDLALALKKLTSRYDNLFQCSFPYSMGWHGAPFNGEENQHWQLHAHFY 300
           VLRITDLTDAQRSDLALALKKLTSRYDNLFQCSFPYSMGWHGAPFNGEENQHWQLHAHFY
Sbjct: 241 VLRITDLTDAQRSDLALALKKLTSRYDNLFQCSFPYSMGWHGAPFNGEENQHWQLHAHFY 300

Query: 301 PPLLRSATVRKFMVGYEMLAETQRDLTAEQAAERLRAVSDIHFRESGV 348
           PPLLRSATVRKFMVGYEMLAETQRDLTAEQAAERLRAVSDIHFRESGV
Sbjct: 301 PPLLRSATVRKFMVGYEMLAETQRDLTAEQAAERLRAVSDIHFRESGV 348


>6GQD-A nrPDB
          Length = 380

 Score =  544 bits (1401), Expect = e-155,   Method: Composition-based stats.
 Identities = 195/345 (56%), Positives = 244/345 (70%), Gaps = 3/345 (0%)

Query: 2   TQFNPVDHPHRRYNPLTGQWILVSPHRAKRPWQGAQETPAKQVLPAHDPDCFLCAGNVRV 61
           T F   DH H RYNPL  +W+LVS HR KRPWQG  E    + +P HDP   LC G +R 
Sbjct: 23  TPFLANDHQHIRYNPLQDEWVLVSAHRMKRPWQGQVEPQLLKTVPRHDPLNPLCPGAIRA 82

Query: 62  TGDKNPDYTGTYVFTNDFAALMSDTPDAPESHDPLMRCQSARGTSRVICFSPDHSKTLPE 121
            G+ NP Y  T++F NDF AL  D P    S  PL + +SARG  +V+CF P    TLP 
Sbjct: 83  NGEVNPQYDSTFLFDNDFPALQPDAPSPGPSDHPLFQAKSARGVCKVMCFHPWSDVTLPL 142

Query: 122 LSVAALTEIVKTWQEQTAELGKTYPWVQVFENKGAAMGCSNPHPHGQIWANSFLPNEAER 181
           +SV  +  +V  W   T ELG  YPWVQ+FENKGA MGCSNPHPH Q+WA+SFLP+ A+R
Sbjct: 143 MSVPEIRAVVDAWASVTEELGAQYPWVQIFENKGAMMGCSNPHPHCQVWASSFLPDIAQR 202

Query: 182 EDRLQKEYFAEQKSPMLVDYVQRELADGSRTVVETEHWLAVVPYWAAWPFETLLLPKAHV 241
           E+R Q+ Y ++   P+L++Y ++EL    R V+ +EHWL +VP+WA WP++TLLLP+ HV
Sbjct: 203 EERSQQAYKSQHGEPLLMEYSRQELLRKERLVLTSEHWLVLVPFWATWPYQTLLLPRRHV 262

Query: 242 LRITDLTDAQRSDLALALKKLTSRYDNLFQCSFPYSMGWHGAPFNGEEN---QHWQLHAH 298
            R+ +LT A+R DLA  +KKL ++YDNLF+ SFPYSMGWHGAP   E      HWQLHAH
Sbjct: 263 RRLPELTPAERDDLASIMKKLLTKYDNLFETSFPYSMGWHGAPTGSEAGANWDHWQLHAH 322

Query: 299 FYPPLLRSATVRKFMVGYEMLAETQRDLTAEQAAERLRAVSDIHF 343
           +YPPLLRSATVRKFMVGYEMLA+ QRDLT EQAAERLRA+ ++H+
Sbjct: 323 YYPPLLRSATVRKFMVGYEMLAQAQRDLTPEQAAERLRALPEVHY 367


>2Q4H-A nrPDB
          Length = 351

 Score =  382 bits (982), Expect = e-107,   Method: Composition-based stats.
 Identities = 79/304 (25%), Positives = 133/304 (43%), Gaps = 23/304 (7%)

Query: 7   VDHPHRRYNPLTGQWILVSPHRAKRPWQGAQETPAK-QVLPAHDPDCF----LCAGNVRV 61
              P  R +P+T +W++ SP RAKRP     ++P      P+  P C      CA  +  
Sbjct: 20  NQSPELRKDPVTNRWVIFSPARAKRPTDFKSKSPQNPNPKPSSCPFCIGREQECAPELFR 79

Query: 62  TGDKNPDYTGTYVFTNDFAAL---MSDTPDAPESHDPLMRCQSARGTSRVICFSPDHSKT 118
             D +P++    V  N + AL   +      PE+     R     G   V+  SP HS  
Sbjct: 80  VPDHDPNWK-LRVIENLYPALSRNLETQSTQPETG--TSRTIVGFGFHDVVIESPVHSIQ 136

Query: 119 LPELSVAALTEIVKTWQEQTAELGK--TYPWVQVFENKGAAMGCSNPHPHGQIWANSFLP 176
           L ++    + +I+  ++++  ++ +  +  ++QVF+N+GA+ G S  H H Q+ A   +P
Sbjct: 137 LSDIDPVGIGDILIAYKKRINQIAQHDSINYIQVFKNQGASAGASMSHSHSQMMALPVVP 196

Query: 177 NEAEREDRLQKEYFAEQKSPMLVDYVQRELADGSRTVVETEHWLAVVPYWAAWPFETLLL 236
                     K+YF E     L +   +        + E+ H+++V P+ A +PFE  ++
Sbjct: 197 PTVSSRLDGTKDYFEETGKCCLCEAKSKHFV-----IDESSHFVSVAPFAATYPFEIWII 251

Query: 237 PKAHVLRITDLTDAQRSDLALALKKLTSRYDNLFQCSFPYSMGWHGAPFNGEENQ----H 292
           PK H      L D +  DL   LK +  +         PY+   H +P    E+Q    H
Sbjct: 252 PKDHSSHFHHLDDVKAVDLGGLLKLMLQKIAKQLN-DPPYNYMIHTSPLKVTESQLPYTH 310

Query: 293 WQLH 296
           W L 
Sbjct: 311 WFLQ 314


>6IQ1-A nrPDB
          Length = 160

 Score = 39.3 bits (90), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/111 (22%), Positives = 47/111 (42%), Gaps = 5/111 (4%)

Query: 191 AEQKSPMLVDYVQRELAD-GSRTVVETEHWLAVVPYWAAWPFETLLLPKAHVLRITDLTD 249
           A   S +    ++ E+         +T  +L + P   A     L++PK H  ++ ++ D
Sbjct: 2   ASHASCIFCKIIKGEIPSFKLIETAKTYSFLDIQPIAEA---HVLIIPKHHGAKLHNIPD 58

Query: 250 AQRSDLALALKKLTSRYDNLFQCSFPYSMGWHGAPFNGEENQHWQLHAHFY 300
              SD+   +KKL ++   L + + P   G++    NG        H HF+
Sbjct: 59  DYLSDILPVVKKL-TKVLKLDENNTPEGEGYNVLQNNGRIAHQVVDHVHFH 108


>1FIT-A nrPDB
          Length = 147

 Score = 35.9 bits (81), Expect = 0.024,   Method: Composition-based stats.
 Identities = 25/99 (25%), Positives = 41/99 (41%), Gaps = 5/99 (5%)

Query: 204 RELADGSRTVVETEHWLAVVPYWAAWPFETLLLPKAHVLRITDLTDAQRSDLALALKKLT 263
           + L   S   ++TE   A+V      P   L+ P   V R  DL   + +DL    +++ 
Sbjct: 7   QHLIKPSVVFLKTELSFALVNRKPVVPGHVLVCPLRPVERFHDLRPDEVADLFQTTQRVG 66

Query: 264 SRYDNLFQ-CSFPYSMGWHGAPFNGEENQHWQLHAHFYP 301
           +  +  F   S  +SM     P  G+  +H  +H H  P
Sbjct: 67  TVVEKHFHGTSLTFSM--QDGPEAGQTVKH--VHVHVLP 101


>3WO5-A nrPDB
          Length = 218

 Score = 34.0 bits (76), Expect = 0.11,   Method: Composition-based stats.
 Identities = 33/136 (24%), Positives = 58/136 (42%), Gaps = 9/136 (6%)

Query: 205 ELADGSRTVVETEHWL-AVVPYWAAWPFETLLLPKAHVLRITDLTDAQRSDLALALKKLT 263
           +L+D    VV     + AV+  +   P   +++P   V  + DLTD + ++L    +K  
Sbjct: 78  QLSDEEGLVVARGKLVYAVLNLYPYNPGHLMVVPYRRVSELEDLTDLESAELMAFTQKAI 137

Query: 264 SRYDNLFQCSFP--YSMGWH-GAPFNGEENQHWQLHAHFYPPLLRSATVRKFMVGYEMLA 320
               N+   S P  +++G + G    G+  +H  LH H  P     A     + G +++ 
Sbjct: 138 RVIKNV---SRPHGFNVGLNLGTSAGGQLAEH--LHVHVVPRWGGDANFITIIGGSKVIP 192

Query: 321 ETQRDLTAEQAAERLR 336
           +  RD     A E  R
Sbjct: 193 QLLRDTRRLLATEWAR 208


>3KSV-A nrPDB
          Length = 149

 Score = 32.8 bits (73), Expect = 0.20,   Method: Composition-based stats.
 Identities = 22/109 (20%), Positives = 44/109 (40%), Gaps = 7/109 (6%)

Query: 233 TLLLPKAHVLRITDLTDAQRSDLALALKKLTSRYDNLFQCSFPYSMGWHGAPFNGEENQH 292
            L++PK H   + +L     +D+ + L K +         S  Y++  +      +E  H
Sbjct: 48  MLVIPKEHASCLHELGMEDAADVGVLLAKASRAVAGP-DGSMQYNVLQNNGSLAHQEVPH 106

Query: 293 WQLHAHFYPPLLRSATVRKFMVGYEMLAETQRDLTAEQAAERLRAVSDI 341
             +H H  P       ++   +G++ +     +L AE A     A++ I
Sbjct: 107 --VHFHIIPKTDEKTGLK---IGWDTVKVASDEL-AEDAKRYSEAIAKI 149


>1Y23-A nrPDB
          Length = 145

 Score = 32.0 bits (71), Expect = 0.37,   Method: Composition-based stats.
 Identities = 23/91 (25%), Positives = 37/91 (40%), Gaps = 5/91 (5%)

Query: 210 SRTVVETEHWLAVVPYWAAWPFETLLLPKAHVLRITDLTDAQRSDLALALKKLTSRYDNL 269
           S  V E EH LA +         TL++PK H+  + + TD        A+ K+     + 
Sbjct: 19  SAKVYEDEHVLAFLDISQVTKGHTLVIPKTHIENVYEFTDELAKQYFHAVPKIARAIRDE 78

Query: 270 FQCSFPYSMGWHGAPFNGEENQHWQLHAHFY 300
           F+      +G +    NGE+      H H +
Sbjct: 79  FEP-----IGLNTLNNNGEKAGQSVFHYHMH 104


>1EMS-A nrPDB
          Length = 440

 Score = 32.0 bits (71), Expect = 0.42,   Method: Composition-based stats.
 Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 3/44 (6%)

Query: 233 TLLLPKAHVLRITDLTDAQRSDLALALKK---LTSRYDNLFQCS 273
            L+ PK  V R+TDLTDA+ +DL +  KK   +  ++ N+   +
Sbjct: 332 VLVSPKRVVPRLTDLTDAETADLFIVAKKVQAMLEKHHNVTSTT 375


>2YKV-A nrPDB
          Length = 465

 Score = 31.6 bits (70), Expect = 0.48,   Method: Composition-based stats.
 Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 4/64 (6%)

Query: 285 FNGEENQHWQLHAHFYPPLLRSATVRKFMVGYEMLAETQRD-LTAEQAAERLRAVSDIHF 343
           F GE       H+H   P++R+A  R   VG  +  +T+ + L AE   +R  ++  + F
Sbjct: 105 FLGEYTAGLFGHSH---PVIRAAVERALAVGLNLSTQTENEALFAEAVCDRFPSIDLVRF 161

Query: 344 RESG 347
             SG
Sbjct: 162 TNSG 165


>3CT9-A nrPDB
          Length = 356

 Score = 30.9 bits (68), Expect = 0.79,   Method: Composition-based stats.
 Identities = 11/59 (18%), Positives = 21/59 (35%)

Query: 173 SFLPNEAEREDRLQKEYFAEQKSPMLVDYVQRELADGSRTVVETEHWLAVVPYWAAWPF 231
           +F+ +    E    ++ FAE +  +  D   R     S  + E   ++         PF
Sbjct: 244 TFVVDIRSNELYSNEDLFAEIRKHIACDAKARSFRLNSSRIDEKHPFVQKAVKMGRIPF 302


>3OJ7-A nrPDB
          Length = 117

 Score = 30.1 bits (66), Expect = 1.4,   Method: Composition-based stats.
 Identities = 14/68 (20%), Positives = 29/68 (42%), Gaps = 2/68 (2%)

Query: 195 SPMLVDYVQRELADGSRTVVETEHWLAVVPYWAAWPFETLLLPKAHVLRITDLTDAQRSD 254
           S +     Q+++   S  V E +   A        P   L++PK H+  + ++T+   + 
Sbjct: 8   SCIFCKIAQKQI--PSTIVYEDDEIFAFKDINPIAPIHILVIPKQHIASLNEITEENEAF 65

Query: 255 LALALKKL 262
           +   L K+
Sbjct: 66  IGKVLYKV 73


>1X7P-A nrPDB
          Length = 287

 Score = 29.7 bits (65), Expect = 2.0,   Method: Composition-based stats.
 Identities = 18/127 (14%), Positives = 38/127 (29%), Gaps = 2/127 (1%)

Query: 54  LCAGNVRVTGDKNPDYTGTYVFTNDFAALMSDTPDAPESHDPLMRCQSARGTSRVICFSP 113
                V    +   D         DF  ++ D P +P +   ++R   A G   +I    
Sbjct: 101 EAPPEVVAVVEMPADDLDRIPVREDFLGVLFDRPTSPGNIGSIIRSADALGAHGLIVAGH 160

Query: 114 DHSKTLPELSVAALTEIVKTWQEQTAELGKTYPWVQVFENKGA--AMGCSNPHPHGQIWA 171
                 P+   ++   +      +    G+   WV+     G    +  ++ H    ++ 
Sbjct: 161 AADVYDPKSVRSSTGSLFSLPAVRVPSPGEVMDWVEARRAAGTPIVLVGTDEHGDCDVFD 220

Query: 172 NSFLPNE 178
             F    
Sbjct: 221 FDFTQPT 227


>3NWI-A nrPDB
          Length = 263

 Score = 28.9 bits (63), Expect = 3.0,   Method: Composition-based stats.
 Identities = 17/44 (38%), Positives = 23/44 (52%)

Query: 301 PPLLRSATVRKFMVGYEMLAETQRDLTAEQAAERLRAVSDIHFR 344
           PP    A +RK ++        QRD+ A  A+ERL  +SD H R
Sbjct: 183 PPRGFLALLRKQLIVMRRYMAPQRDVYARLASERLPWMSDDHRR 226


>1ATG-A nrPDB
          Length = 231

 Score = 28.2 bits (61), Expect = 5.3,   Method: Composition-based stats.
 Identities = 7/22 (31%), Positives = 13/22 (59%)

Query: 290 NQHWQLHAHFYPPLLRSATVRK 311
             HW   A++Y P+++ A + K
Sbjct: 177 GSHWFPPANYYEPIVQQAVITK 198


>1UFA-A nrPDB
          Length = 520

 Score = 27.4 bits (59), Expect = 9.2,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 1/41 (2%)

Query: 11  HRRYNPLTGQWILVSPHRAKRPWQGAQETPAKQVLPAHDPD 51
           H   +P TG W+    +R K PW+   E P + V P  D  
Sbjct: 172 HFAKDP-TGFWLPEMAYRPKGPWKPPVEGPPEGVRPGVDEL 211


  Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta
    Posted date:  Jan 3, 2023  9:05 PM
  Number of letters in database: 10,336,785
  Number of sequences in database:  36,641
  
Lambda     K      H
   0.306    0.127    0.366 

Lambda     K      H
   0.267   0.0380    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,834,289
Number of Sequences: 36641
Number of extensions: 516498
Number of successful extensions: 1278
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 1251
Number of HSP's gapped (non-prelim): 29
length of query: 348
length of database: 10,336,785
effective HSP length: 98
effective length of query: 250
effective length of database: 6,745,967
effective search space: 1686491750
effective search space used: 1686491750
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.1 bits)
S2: 59 (27.4 bits)