BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= P08395 (618 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 3BF0-A nrPDB 1172 0.0 4KWB-A nrPDB 134 1e-31 3RST-A nrPDB 133 2e-31 6CFD-A nrPDB 34 0.15 3KTI-A nrPDB 34 0.23 3QWD-A nrPDB 32 0.59 1SDD-B nrPDB 32 0.60 4JCT-A nrPDB 32 0.86 5CB6-A nrPDB 31 1.3 1Y7O-A nrPDB 31 1.9 1E1H-A nrPDB 30 2.3 4JWV-A nrPDB 30 3.0 6FNP-B nrPDB 30 3.7 4PFU-A nrPDB 29 6.3 3K3Q-B nrPDB 29 6.9 3EBV-A nrPDB 29 7.0 3V48-A nrPDB 29 7.2 4B3J-A nrPDB 28 8.5 2PGN-A nrPDB 28 9.7 1I2D-A nrPDB 28 9.9 >3BF0-A nrPDB Length = 593 Score = 1172 bits (3032), Expect = 0.0, Method: Compositional matrix adjust. Identities = 572/572 (100%), Positives = 572/572 (100%) Query: 47 GGDSKETASRGALLLDISGVIVDKPDSSQRFSKLSRQLLGASSDRLQENSLFDIVNTIRQ 106 GGDSKETASRGALLLDISGVIVDKPDSSQRFSKLSRQLLGASSDRLQENSLFDIVNTIRQ Sbjct: 22 GGDSKETASRGALLLDISGVIVDKPDSSQRFSKLSRQLLGASSDRLQENSLFDIVNTIRQ 81 Query: 107 AKDDRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGKPVYAVGENYSQGQYYLASFA 166 AKDDRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGKPVYAVGENYSQGQYYLASFA Sbjct: 82 AKDDRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGKPVYAVGENYSQGQYYLASFA 141 Query: 167 NKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRVGTYKSAVEPFIRDDMSPAARE 226 NKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRVGTYKSAVEPFIRDDMSPAARE Sbjct: 142 NKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRVGTYKSAVEPFIRDDMSPAARE 201 Query: 227 ADSRWIGELWQNYLNTVAANRQIPAEQVFPGAQGLLEGLTKTGGDTAKYALENKLVDALA 286 ADSRWIGELWQNYLNTVAANRQIPAEQVFPGAQGLLEGLTKTGGDTAKYALENKLVDALA Sbjct: 202 ADSRWIGELWQNYLNTVAANRQIPAEQVFPGAQGLLEGLTKTGGDTAKYALENKLVDALA 261 Query: 287 SSAEIEKALTKEFGWSKTDKNYRAISYYDYALKTPADTGDSIGVVFANGAIMDGEETQGN 346 SSAEIEKALTKEFGWSKTDKNYRAISYYDYALKTPADTGDSIGVVFANGAIMDGEETQGN Sbjct: 262 SSAEIEKALTKEFGWSKTDKNYRAISYYDYALKTPADTGDSIGVVFANGAIMDGEETQGN 321 Query: 347 VGGDTTAAQIRDARLDPKVKAIVLRVNSPGGSVTASEVIRAELAAARAAGKPVVVSMGGM 406 VGGDTTAAQIRDARLDPKVKAIVLRVNSPGGSVTASEVIRAELAAARAAGKPVVVSMGGM Sbjct: 322 VGGDTTAAQIRDARLDPKVKAIVLRVNSPGGSVTASEVIRAELAAARAAGKPVVVSMGGM 381 Query: 407 AASGGYWISTPANYIVANPSTLTGSIGIFGVITTVENSLDSIGVHTDGVSTSPLADVSIT 466 AASGGYWISTPANYIVANPSTLTGSIGIFGVITTVENSLDSIGVHTDGVSTSPLADVSIT Sbjct: 382 AASGGYWISTPANYIVANPSTLTGSIGIFGVITTVENSLDSIGVHTDGVSTSPLADVSIT 441 Query: 467 RALPPEAQLMMQLSIENGYKRFITLVADARHSTPEQIDKIAQGHVWTGQDAKANGLVDSL 526 RALPPEAQLMMQLSIENGYKRFITLVADARHSTPEQIDKIAQGHVWTGQDAKANGLVDSL Sbjct: 442 RALPPEAQLMMQLSIENGYKRFITLVADARHSTPEQIDKIAQGHVWTGQDAKANGLVDSL 501 Query: 527 GDFDDAVAKAAELAKVKQWHLEYYVDEPTFFDKVMDNMSGSVRAMLPDAFQAMLPAPLAS 586 GDFDDAVAKAAELAKVKQWHLEYYVDEPTFFDKVMDNMSGSVRAMLPDAFQAMLPAPLAS Sbjct: 502 GDFDDAVAKAAELAKVKQWHLEYYVDEPTFFDKVMDNMSGSVRAMLPDAFQAMLPAPLAS 561 Query: 587 VASTVKSESDKLAAFNDPQNRYAFCLTCANMR 618 VASTVKSESDKLAAFNDPQNRYAFCLTCANMR Sbjct: 562 VASTVKSESDKLAAFNDPQNRYAFCLTCANMR 593 >4KWB-A nrPDB Length = 273 Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 79/213 (37%), Positives = 117/213 (54%), Gaps = 7/213 (3%) Query: 328 IGVVFANGAIMDGEETQGNVGGD-----TTAAQIRDARLDPKVKAIVLRVNSPGGSVTAS 382 I V+ +G I D ++ +G D T + A+ D VK IVL+VNSPGG V S Sbjct: 10 IAVLEVSGTIQDNGDSSSLLGADGYNHRTFLKNLERAKDDKTVKGIVLKVNSPGGGVYES 69 Query: 383 EVIRAELAA-ARAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLTGSIGIFGVITTV 441 I +L + KP+ VSMG MAASGGY+IST A+ I A P TLTGS+G+ Sbjct: 70 AEIHKKLEEIKKETKKPIYVSMGSMAASGGYYISTAADKIFATPETLTGSLGVIMESVNY 129 Query: 442 ENSLDSIGVHTDGVSTSPLADV-SITRALPPEAQLMMQLSIENGYKRFITLVADARHSTP 500 D +G+ + + + AD+ S +R + E + +MQ ++N Y+ F+ +++ R Sbjct: 130 SKLADKLGISFETIKSGAHADIMSPSREMTKEEKNIMQSMVDNSYEGFVDVISKGRGMPK 189 Query: 501 EQIDKIAQGHVWTGQDAKANGLVDSLGDFDDAV 533 ++ KIA G V+ G+ AK LVD LG +DD + Sbjct: 190 AEVKKIADGRVYDGRQAKKLNLVDELGFYDDTI 222 Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 53/203 (26%), Positives = 100/203 (49%), Gaps = 18/203 (8%) Query: 60 LLDISGVIVDKPDSSQRFSKLSRQLLGASSDRLQENSLFDIVNTIRQAKDDRNITGIVMD 119 +L++SG I D DSS LLGA D + + + +AKDD+ + GIV+ Sbjct: 12 VLEVSGTIQDNGDSSS--------LLGA--DGYNHRTF---LKNLERAKDDKTVKGIVLK 58 Query: 120 LKNFAGGDQPSMQYIGKALKEFR-DSGKPVY-AVGENYSQGQYYLASFANKIWLSPQGVV 177 + + GG S + I K L+E + ++ KP+Y ++G + G YY+++ A+KI+ +P+ + Sbjct: 59 VNSPGGGVYESAE-IHKKLEEIKKETKKPIYVSMGSMAASGGYYISTAADKIFATPETLT 117 Query: 178 DLHGFATNGLYYKSLLDKLKVSTHVFRVGTYKSAVEPFIRDDMSPAAREADSRWIGELWQ 237 G + Y L DKL +S + G + + P +M+ + + ++ Sbjct: 118 GSLGVIMESVNYSKLADKLGISFETIKSGAHADIMSP--SREMTKEEKNIMQSMVDNSYE 175 Query: 238 NYLNTVAANRQIPAEQVFPGAQG 260 +++ ++ R +P +V A G Sbjct: 176 GFVDVISKGRGMPKAEVKKIADG 198 >3RST-A nrPDB Length = 240 Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 79/213 (37%), Positives = 117/213 (54%), Gaps = 7/213 (3%) Query: 328 IGVVFANGAIMDGEETQGNVGGD-----TTAAQIRDARLDPKVKAIVLRVNSPGGSVTAS 382 I V+ +G I D ++ +G D T + A+ D VK IVL+VNSPGG V S Sbjct: 5 IAVLEVSGTIQDNGDSSSLLGADGYNHRTFLKNLERAKDDKTVKGIVLKVNSPGGGVYES 64 Query: 383 EVIRAELAA-ARAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLTGSIGIFGVITTV 441 I +L + KP+ VSMG MAASGGY+IST A+ I A P TLTGS+G+ Sbjct: 65 AEIHKKLEEIKKETKKPIYVSMGSMAASGGYYISTAADKIFATPETLTGSLGVIMESVNY 124 Query: 442 ENSLDSIGVHTDGVSTSPLADV-SITRALPPEAQLMMQLSIENGYKRFITLVADARHSTP 500 D +G+ + + + AD+ S +R + E + +MQ ++N Y+ F+ +++ R Sbjct: 125 SKLADKLGISFETIKSGAHADIMSPSREMTKEEKNIMQSMVDNSYEGFVDVISKGRGMPK 184 Query: 501 EQIDKIAQGHVWTGQDAKANGLVDSLGDFDDAV 533 ++ KIA G V+ G+ AK LVD LG +DD + Sbjct: 185 AEVKKIADGRVYDGRQAKKLNLVDELGFYDDTI 217 Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 53/203 (26%), Positives = 99/203 (48%), Gaps = 18/203 (8%) Query: 60 LLDISGVIVDKPDSSQRFSKLSRQLLGASSDRLQENSLFDIVNTIRQAKDDRNITGIVMD 119 +L++SG I D DSS LLGA D + + +AKDD+ + GIV+ Sbjct: 7 VLEVSGTIQDNGDSSS--------LLGA--DGYNHRTFL---KNLERAKDDKTVKGIVLK 53 Query: 120 LKNFAGGDQPSMQYIGKALKEFR-DSGKPVY-AVGENYSQGQYYLASFANKIWLSPQGVV 177 + + GG S + I K L+E + ++ KP+Y ++G + G YY+++ A+KI+ +P+ + Sbjct: 54 VNSPGGGVYESAE-IHKKLEEIKKETKKPIYVSMGSMAASGGYYISTAADKIFATPETLT 112 Query: 178 DLHGFATNGLYYKSLLDKLKVSTHVFRVGTYKSAVEPFIRDDMSPAAREADSRWIGELWQ 237 G + Y L DKL +S + G + + P +M+ + + ++ Sbjct: 113 GSLGVIMESVNYSKLADKLGISFETIKSGAHADIMSP--SREMTKEEKNIMQSMVDNSYE 170 Query: 238 NYLNTVAANRQIPAEQVFPGAQG 260 +++ ++ R +P +V A G Sbjct: 171 GFVDVISKGRGMPKAEVKKIADG 193 >6CFD-A nrPDB Length = 210 Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust. Identities = 22/51 (43%), Positives = 30/51 (58%), Gaps = 3/51 (5%) Query: 366 KAIVLRVNSPGGSVTASEVIRAELAAARAAGKPVVVSMGGMAASGGYWIST 416 K I L +NSPGGSVTA I + +A + +V+ GMAAS G ++ T Sbjct: 58 KDIYLYINSPGGSVTAGMAIYDTMNFVKADVQTIVM---GMAASMGSFLLT 105 >3KTI-A nrPDB Length = 199 Score = 33.9 bits (76), Expect = 0.23, Method: Compositional matrix adjust. Identities = 34/113 (30%), Positives = 48/113 (42%), Gaps = 18/113 (15%) Query: 302 SKTDKNYRAISYYDYALKTPADTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARL 361 +T++ RA Y LK D I IM G NV + + A Sbjct: 8 EQTNRGERAYDIYSRLLK------DRI--------IMLGSAIDDNVANSIVSQLLFLAAE 53 Query: 362 DPKVKAIVLRVNSPGGSVTASEVIRAELAAARAAGKPVVVSMGGMAASGGYWI 414 DP+ K I L +NSPGGS+TA I + + + + GMAAS G ++ Sbjct: 54 DPE-KEISLYINSPGGSITAGMAIYDTMQFIKPKVSTICI---GMAASMGAFL 102 >3QWD-A nrPDB Length = 203 Score = 32.3 bits (72), Expect = 0.59, Method: Compositional matrix adjust. Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 4/78 (5%) Query: 337 IMDGEETQGNVGGDTTAAQIRDARLDPKVKAIVLRVNSPGGSVTASEVIRAELAAARAAG 396 IM G + NV ++ +Q+ + K I L +NSPGGSVTA I + + Sbjct: 30 IMLGSQIDDNVA-NSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIKPDV 88 Query: 397 KPVVVSMGGMAASGGYWI 414 + + + GMAAS G ++ Sbjct: 89 QTICI---GMAASMGSFL 103 >1SDD-B nrPDB Length = 647 Score = 32.3 bits (72), Expect = 0.60, Method: Compositional matrix adjust. Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 4/72 (5%) Query: 334 NGAIMDGEETQGNV--GGDTTAAQIRDARLDPKVKAIVLRVNSPGGSVTASEVIRAELAA 391 N I G T+ + GG++ A+ I++ ++DP V A +R+ SP GS +R EL Sbjct: 426 NWRIFKGNSTRNVMYFGGNSDASTIKENQIDPPVVARYIRI-SPTGSYNKP-ALRLELQG 483 Query: 392 ARAAGKPVVVSM 403 G + M Sbjct: 484 CEVNGCSTPLGM 495 >4JCT-A nrPDB Length = 209 Score = 32.0 bits (71), Expect = 0.86, Method: Compositional matrix adjust. Identities = 25/83 (30%), Positives = 39/83 (46%), Gaps = 3/83 (3%) Query: 337 IMDGEETQGNVGGDTTAAQIRDARLDPKVKAIVLRVNSPGGSVTASEVIRAELAAARAAG 396 IM G NV + + DP+ K I L +NSPGGS++A I + +A Sbjct: 30 IMLGSAIDDNVANSIVSQLLFLDAQDPE-KDIFLYINSPGGSISAGMAIYDTMNFVKADV 88 Query: 397 KPVVVSMGGMAASGGYWISTPAN 419 + + MG A+ G + ++ AN Sbjct: 89 Q--TIGMGMAASMGSFLLTAGAN 109 >5CB6-A nrPDB Length = 197 Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust. Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 7/64 (10%) Query: 262 LEGLTKTGGDTAKYALENKLVDA-----LASSAEIEKALTKEFGWSKTDK--NYRAISYY 314 L GL+ G T +ALE KL D+ + + LTK G+SK D+ N R I + Sbjct: 30 LTGLSGAGKTTITHALEKKLRDSGYRLEVLDGDVVRTNLTKGLGFSKEDRDTNIRRIGFV 89 Query: 315 DYAL 318 + L Sbjct: 90 SHLL 93 >1Y7O-A nrPDB Length = 218 Score = 30.8 bits (68), Expect = 1.9, Method: Compositional matrix adjust. Identities = 21/51 (41%), Positives = 30/51 (58%), Gaps = 3/51 (5%) Query: 366 KAIVLRVNSPGGSVTASEVIRAELAAARAAGKPVVVSMGGMAASGGYWIST 416 K I L VN+PGGSV+A I + +A + +V+ GMAAS G I++ Sbjct: 76 KDIYLYVNTPGGSVSAGLAIVDTMNFIKADVQTIVM---GMAASMGTVIAS 123 >1E1H-A nrPDB Length = 287 Score = 30.4 bits (67), Expect = 2.3, Method: Compositional matrix adjust. Identities = 24/100 (24%), Positives = 47/100 (47%), Gaps = 10/100 (10%) Query: 11 FFKWTWRLLNFVREMVLNLFFIFLVLVGVGIWMQVSGGDSKETASRGALLLDISGVIVDK 70 + K +L + L + ++ G+ W GG + +T + ++D + + V + Sbjct: 124 YLKGVTKLFERIYSTDLGRMLLTSIVRGIPFW----GGSTIDTELK---VIDTNCINVIQ 176 Query: 71 PDSSQRFSKLSRQLLGASSDRLQ-ENSLF--DIVNTIRQA 107 PD S R +L+ ++G S+D +Q E F D++N R Sbjct: 177 PDGSYRSEELNLVIIGPSADIIQFECKSFGHDVLNLTRNG 216 >4JWV-A nrPDB Length = 278 Score = 30.0 bits (66), Expect = 3.0, Method: Compositional matrix adjust. Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 7/49 (14%) Query: 397 KPVVVSMGGMAASGGYWISTPANYIVAN-------PSTLTGSIGIFGVI 438 KP+V ++ G GG+ ++ A+ IVA P T G IG GV+ Sbjct: 116 KPMVAAVQGFCVGGGFELAMCADIIVAADTAQFGLPETKVGIIGECGVV 164 >6FNP-B nrPDB Length = 300 Score = 29.6 bits (65), Expect = 3.7, Method: Compositional matrix adjust. Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 6/66 (9%) Query: 84 LLGASSDRLQENSLFDIVNTIRQAKDDRNIT--GIVMDLKNFAGGDQPSMQYIGKALKEF 141 +L S+ L I++ +R+ K+D N+T I DL+ AG DQ + G+ L Sbjct: 184 ILDESTSMLDPEGKEQILDLVRKIKEDNNLTVISITHDLEEAAGADQVLVLDDGQLL--- 240 Query: 142 RDSGKP 147 D GKP Sbjct: 241 -DQGKP 245 >4PFU-A nrPDB Length = 547 Score = 28.9 bits (63), Expect = 6.3, Method: Compositional matrix adjust. Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 2/37 (5%) Query: 162 LASFANKIWLS--PQGVVDLHGFATNGLYYKSLLDKL 196 L N +W+ P+ VV+ HGF + KS+LDKL Sbjct: 303 LGFLPNSVWMKYYPKEVVEKHGFKYDPEEAKSILDKL 339 >3K3Q-B nrPDB Length = 252 Score = 28.9 bits (63), Expect = 6.9, Method: Compositional matrix adjust. Identities = 19/83 (22%), Positives = 40/83 (48%), Gaps = 7/83 (8%) Query: 11 FFKWTWRLLNFVREMVLNLFFIFLVLVGVGIWMQVSGGDSKETASRGALLLDISGVIVDK 70 + K +L + L + ++ G+ W GG + +T + ++D + + V + Sbjct: 89 YLKGVTKLFERIYSTDLGRMLLTSIVRGIPFW----GGSTIDTELK---VIDTNCINVIQ 141 Query: 71 PDSSQRFSKLSRQLLGASSDRLQ 93 PD S R +L+ ++G S+D +Q Sbjct: 142 PDGSYRSEELNLVIIGPSADIIQ 164 >3EBV-A nrPDB Length = 302 Score = 28.9 bits (63), Expect = 7.0, Method: Compositional matrix adjust. Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 2/56 (3%) Query: 350 DTTAAQIRDARLDPKVKAIVLRVNSPGGSVTASEVIRAELAAARAAGKPVVVSMGG 405 D A DA P A+ ++S G + +A++ A +AAGK V++S+GG Sbjct: 31 DIIAVAFADATTTPG--AVTFNLDSAGLGGYTVDQFKADVRAKQAAGKKVIISVGG 84 >3V48-A nrPDB Length = 268 Score = 28.9 bits (63), Expect = 7.2, Method: Compositional matrix adjust. Identities = 31/108 (28%), Positives = 45/108 (41%), Gaps = 15/108 (13%) Query: 395 AGKPVVVSMGGMAASGGYWISTPA----NYIVA---------NPSTLTGSIGIFGVITTV 441 A PVVV + G+ SG YW+ A Y V NP TL I + + Sbjct: 13 ADAPVVVLISGLGGSGSYWLPQLAVLEQEYQVVCYDQRGTGNNPDTLAEDYSIAQMAAEL 72 Query: 442 ENSLDSIGVHTDGVSTSPL-ADVSITRALPPEAQLMMQLSIENGYKRF 488 +L + G+ V L A V + AL A + + +S+ NG+ R Sbjct: 73 HQALVAAGIEHYAVVGHALGALVGMQLALDYPASVTVLISV-NGWLRI 119 >4B3J-A nrPDB Length = 736 Score = 28.5 bits (62), Expect = 8.5, Method: Compositional matrix adjust. Identities = 14/41 (34%), Positives = 22/41 (53%) Query: 383 EVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVA 423 E I+ +L GKPVV ++ G A GG I+ ++ +A Sbjct: 105 ETIKRQLRTLETLGKPVVAAINGAALGGGLEIALACHHRIA 145 >2PGN-A nrPDB Length = 589 Score = 28.5 bits (62), Expect = 9.7, Method: Compositional matrix adjust. Identities = 25/64 (39%), Positives = 33/64 (51%), Gaps = 9/64 (14%) Query: 350 DTTAAQIRDARLDPKVKAIVLRVNSPGGSV--TASEVIRAELAAARAAGKPVVVSMGGMA 407 D TA QI D KA+V R + SV +E +R A AA PV+++ GG+A Sbjct: 165 DLTADQIDD-------KALVPRGATRAKSVLHAPNEDVREAAAQLVAAKNPVILAGGGVA 217 Query: 408 ASGG 411 SGG Sbjct: 218 RSGG 221 >1I2D-A nrPDB Length = 573 Score = 28.5 bits (62), Expect = 9.9, Method: Compositional matrix adjust. Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 12/56 (21%) Query: 103 TIRQAKDDRNITGIVMD----------LKNFAGGD--QPSMQYIGKALKEFRDSGK 146 T+R +DDRN+ + +D K GGD P++ Y+ +KEF GK Sbjct: 104 TLRDFRDDRNLAILTIDDIYRPDKTKEAKLVFGGDPEHPAIVYLNNTVKEFYIGGK 159 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 3BF0-A nrPDB 1024 0.0 4KWB-A nrPDB 320 1e-87 3RST-A nrPDB 318 6e-87 Sequences not found previously or not previously below threshold: 6CFD-A nrPDB 43 4e-04 4JCT-A nrPDB 37 0.019 3KTI-A nrPDB 37 0.019 3QWD-A nrPDB 36 0.038 1DGJ-A nrPDB 35 0.078 1Y7O-A nrPDB 34 0.14 4BGV-A nrPDB 34 0.28 6IUM-B nrPDB 34 0.28 3OME-A nrPDB 34 0.30 5UJS-A nrPDB 33 0.39 1NZY-B nrPDB 32 0.54 5G1S-A nrPDB 32 0.55 5HXA-A nrPDB 32 0.66 3EBV-A nrPDB 32 0.66 3L6V-A nrPDB 32 0.66 2HW5-A nrPDB 32 0.77 5CB6-A nrPDB 32 0.81 2ZL3-A nrPDB 32 0.92 6MX2-A nrPDB 32 1.1 3MT6-R nrPDB 31 1.2 1XTB-A nrPDB 31 1.5 4E4G-A nrPDB 31 1.6 2PGN-A nrPDB 31 1.8 1PZ1-A nrPDB 31 1.9 1GZD-A nrPDB 30 2.2 3MJF-A nrPDB 30 2.3 6EEP-A nrPDB 30 2.4 3CLW-A nrPDB 30 2.8 4JWV-A nrPDB 30 3.0 4JCS-A nrPDB 30 3.1 3X00-A nrPDB 30 3.1 5NFR-A nrPDB 30 3.2 1O99-A nrPDB 30 3.2 3RDS-A nrPDB 30 3.3 5X4Z-H nrPDB 30 3.4 5M6Q-A nrPDB 30 3.9 5DKP-A nrPDB 30 4.0 4V03-A nrPDB 30 4.3 6AJD-A nrPDB 29 5.8 5VEV-A nrPDB 29 6.3 4EKV-A nrPDB 29 7.0 5HJL-A nrPDB 29 7.2 4YRY-B nrPDB 29 7.3 2IEX-A nrPDB 29 7.4 5N8B-A nrPDB 29 9.2 >3BF0-A nrPDB Length = 593 Score = 1024 bits (2647), Expect = 0.0, Method: Composition-based stats. Identities = 572/572 (100%), Positives = 572/572 (100%) Query: 47 GGDSKETASRGALLLDISGVIVDKPDSSQRFSKLSRQLLGASSDRLQENSLFDIVNTIRQ 106 GGDSKETASRGALLLDISGVIVDKPDSSQRFSKLSRQLLGASSDRLQENSLFDIVNTIRQ Sbjct: 22 GGDSKETASRGALLLDISGVIVDKPDSSQRFSKLSRQLLGASSDRLQENSLFDIVNTIRQ 81 Query: 107 AKDDRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGKPVYAVGENYSQGQYYLASFA 166 AKDDRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGKPVYAVGENYSQGQYYLASFA Sbjct: 82 AKDDRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGKPVYAVGENYSQGQYYLASFA 141 Query: 167 NKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRVGTYKSAVEPFIRDDMSPAARE 226 NKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRVGTYKSAVEPFIRDDMSPAARE Sbjct: 142 NKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRVGTYKSAVEPFIRDDMSPAARE 201 Query: 227 ADSRWIGELWQNYLNTVAANRQIPAEQVFPGAQGLLEGLTKTGGDTAKYALENKLVDALA 286 ADSRWIGELWQNYLNTVAANRQIPAEQVFPGAQGLLEGLTKTGGDTAKYALENKLVDALA Sbjct: 202 ADSRWIGELWQNYLNTVAANRQIPAEQVFPGAQGLLEGLTKTGGDTAKYALENKLVDALA 261 Query: 287 SSAEIEKALTKEFGWSKTDKNYRAISYYDYALKTPADTGDSIGVVFANGAIMDGEETQGN 346 SSAEIEKALTKEFGWSKTDKNYRAISYYDYALKTPADTGDSIGVVFANGAIMDGEETQGN Sbjct: 262 SSAEIEKALTKEFGWSKTDKNYRAISYYDYALKTPADTGDSIGVVFANGAIMDGEETQGN 321 Query: 347 VGGDTTAAQIRDARLDPKVKAIVLRVNSPGGSVTASEVIRAELAAARAAGKPVVVSMGGM 406 VGGDTTAAQIRDARLDPKVKAIVLRVNSPGGSVTASEVIRAELAAARAAGKPVVVSMGGM Sbjct: 322 VGGDTTAAQIRDARLDPKVKAIVLRVNSPGGSVTASEVIRAELAAARAAGKPVVVSMGGM 381 Query: 407 AASGGYWISTPANYIVANPSTLTGSIGIFGVITTVENSLDSIGVHTDGVSTSPLADVSIT 466 AASGGYWISTPANYIVANPSTLTGSIGIFGVITTVENSLDSIGVHTDGVSTSPLADVSIT Sbjct: 382 AASGGYWISTPANYIVANPSTLTGSIGIFGVITTVENSLDSIGVHTDGVSTSPLADVSIT 441 Query: 467 RALPPEAQLMMQLSIENGYKRFITLVADARHSTPEQIDKIAQGHVWTGQDAKANGLVDSL 526 RALPPEAQLMMQLSIENGYKRFITLVADARHSTPEQIDKIAQGHVWTGQDAKANGLVDSL Sbjct: 442 RALPPEAQLMMQLSIENGYKRFITLVADARHSTPEQIDKIAQGHVWTGQDAKANGLVDSL 501 Query: 527 GDFDDAVAKAAELAKVKQWHLEYYVDEPTFFDKVMDNMSGSVRAMLPDAFQAMLPAPLAS 586 GDFDDAVAKAAELAKVKQWHLEYYVDEPTFFDKVMDNMSGSVRAMLPDAFQAMLPAPLAS Sbjct: 502 GDFDDAVAKAAELAKVKQWHLEYYVDEPTFFDKVMDNMSGSVRAMLPDAFQAMLPAPLAS 561 Query: 587 VASTVKSESDKLAAFNDPQNRYAFCLTCANMR 618 VASTVKSESDKLAAFNDPQNRYAFCLTCANMR Sbjct: 562 VASTVKSESDKLAAFNDPQNRYAFCLTCANMR 593 >4KWB-A nrPDB Length = 273 Score = 320 bits (819), Expect = 1e-87, Method: Composition-based stats. Identities = 79/213 (37%), Positives = 117/213 (54%), Gaps = 7/213 (3%) Query: 328 IGVVFANGAIMDGEETQGNVGGD-----TTAAQIRDARLDPKVKAIVLRVNSPGGSVTAS 382 I V+ +G I D ++ +G D T + A+ D VK IVL+VNSPGG V S Sbjct: 10 IAVLEVSGTIQDNGDSSSLLGADGYNHRTFLKNLERAKDDKTVKGIVLKVNSPGGGVYES 69 Query: 383 EVIRAELAA-ARAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLTGSIGIFGVITTV 441 I +L + KP+ VSMG MAASGGY+IST A+ I A P TLTGS+G+ Sbjct: 70 AEIHKKLEEIKKETKKPIYVSMGSMAASGGYYISTAADKIFATPETLTGSLGVIMESVNY 129 Query: 442 ENSLDSIGVHTDGVSTSPLADV-SITRALPPEAQLMMQLSIENGYKRFITLVADARHSTP 500 D +G+ + + + AD+ S +R + E + +MQ ++N Y+ F+ +++ R Sbjct: 130 SKLADKLGISFETIKSGAHADIMSPSREMTKEEKNIMQSMVDNSYEGFVDVISKGRGMPK 189 Query: 501 EQIDKIAQGHVWTGQDAKANGLVDSLGDFDDAV 533 ++ KIA G V+ G+ AK LVD LG +DD + Sbjct: 190 AEVKKIADGRVYDGRQAKKLNLVDELGFYDDTI 222 Score = 261 bits (667), Expect = 6e-70, Method: Composition-based stats. Identities = 69/280 (24%), Positives = 130/280 (46%), Gaps = 30/280 (10%) Query: 60 LLDISGVIVDKPDSSQRFSKLSRQLLGASSDRLQENSLFDIVNTIRQAKDDRNITGIVMD 119 +L++SG I D DSS LLGA D + + + +AKDD+ + GIV+ Sbjct: 12 VLEVSGTIQDNGDSSS--------LLGA--DGYNHRTF---LKNLERAKDDKTVKGIVLK 58 Query: 120 LKNFAGGDQPSMQYIGKALKEFR-DSGKPVY-AVGENYSQGQYYLASFANKIWLSPQGVV 177 + + GG S + I K L+E + ++ KP+Y ++G + G YY+++ A+KI+ +P+ + Sbjct: 59 VNSPGGGVYESAE-IHKKLEEIKKETKKPIYVSMGSMAASGGYYISTAADKIFATPETLT 117 Query: 178 DLHGFATNGLYYKSLLDKLKVSTHVFRVGTYKSAVEPFIRDDMSPAAREADSRWIGELWQ 237 G + Y L DKL +S + G + + P +M+ + + ++ Sbjct: 118 GSLGVIMESVNYSKLADKLGISFETIKSGAHADIMSP--SREMTKEEKNIMQSMVDNSYE 175 Query: 238 NYLNTVAANRQIPAEQVFPGAQGLLEGLTKTGGDTAKYALENKLVDALASSAEIEKALTK 297 +++ ++ R +P +V A G + + A + LVD L + A+ K Sbjct: 176 GFVDVISKGRGMPKAEVKKIADGRVY--------DGRQAKKLNLVDELGFYDDTITAMKK 227 Query: 298 EFGWSKTDKNYRAISYYD-YALKTPADTGDSIGVVFANGA 336 + K KN ISY + + K+ D + ++ +G+ Sbjct: 228 D---HKDLKNASVISYEESFGFKSEIDFLNMREILSQSGS 264 >3RST-A nrPDB Length = 240 Score = 318 bits (814), Expect = 6e-87, Method: Composition-based stats. Identities = 79/213 (37%), Positives = 117/213 (54%), Gaps = 7/213 (3%) Query: 328 IGVVFANGAIMDGEETQGNVGGD-----TTAAQIRDARLDPKVKAIVLRVNSPGGSVTAS 382 I V+ +G I D ++ +G D T + A+ D VK IVL+VNSPGG V S Sbjct: 5 IAVLEVSGTIQDNGDSSSLLGADGYNHRTFLKNLERAKDDKTVKGIVLKVNSPGGGVYES 64 Query: 383 EVIRAELAA-ARAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLTGSIGIFGVITTV 441 I +L + KP+ VSMG MAASGGY+IST A+ I A P TLTGS+G+ Sbjct: 65 AEIHKKLEEIKKETKKPIYVSMGSMAASGGYYISTAADKIFATPETLTGSLGVIMESVNY 124 Query: 442 ENSLDSIGVHTDGVSTSPLADV-SITRALPPEAQLMMQLSIENGYKRFITLVADARHSTP 500 D +G+ + + + AD+ S +R + E + +MQ ++N Y+ F+ +++ R Sbjct: 125 SKLADKLGISFETIKSGAHADIMSPSREMTKEEKNIMQSMVDNSYEGFVDVISKGRGMPK 184 Query: 501 EQIDKIAQGHVWTGQDAKANGLVDSLGDFDDAV 533 ++ KIA G V+ G+ AK LVD LG +DD + Sbjct: 185 AEVKKIADGRVYDGRQAKKLNLVDELGFYDDTI 217 Score = 258 bits (660), Expect = 5e-69, Method: Composition-based stats. Identities = 66/256 (25%), Positives = 119/256 (46%), Gaps = 29/256 (11%) Query: 60 LLDISGVIVDKPDSSQRFSKLSRQLLGASSDRLQENSLFDIVNTIRQAKDDRNITGIVMD 119 +L++SG I D DSS LLGA D + + + +AKDD+ + GIV+ Sbjct: 7 VLEVSGTIQDNGDSSS--------LLGA--DGYNHRTF---LKNLERAKDDKTVKGIVLK 53 Query: 120 LKNFAGGDQPSMQYIGKALKEFR-DSGKPVY-AVGENYSQGQYYLASFANKIWLSPQGVV 177 + + GG S + I K L+E + ++ KP+Y ++G + G YY+++ A+KI+ +P+ + Sbjct: 54 VNSPGGGVYESAE-IHKKLEEIKKETKKPIYVSMGSMAASGGYYISTAADKIFATPETLT 112 Query: 178 DLHGFATNGLYYKSLLDKLKVSTHVFRVGTYKSAVEPFIRDDMSPAAREADSRWIGELWQ 237 G + Y L DKL +S + G + + P +M+ + + ++ Sbjct: 113 GSLGVIMESVNYSKLADKLGISFETIKSGAHADIMSP--SREMTKEEKNIMQSMVDNSYE 170 Query: 238 NYLNTVAANRQIPAEQVFPGAQGLLEGLTKTGGDTAKYALENKLVDALASSAEIEKALTK 297 +++ ++ R +P +V A G + + A + LVD L + A+ K Sbjct: 171 GFVDVISKGRGMPKAEVKKIADGRVY--------DGRQAKKLNLVDELGFYDDTITAMKK 222 Query: 298 EFGWSKTDKNYRAISY 313 + K KN ISY Sbjct: 223 D---HKDLKNASVISY 235 >6CFD-A nrPDB Length = 210 Score = 43.2 bits (100), Expect = 4e-04, Method: Composition-based stats. Identities = 43/181 (23%), Positives = 71/181 (39%), Gaps = 35/181 (19%) Query: 349 GDTTAAQIRDARLDPKVKAIVLRVNSPGGSVTASEVIRAELAAARAAGKPVVVSMGGMAA 408 ++ AQ+ K I L +NSPGGSVTA I + +A + +V+ GMAA Sbjct: 41 ANSIIAQLLFLDAQDSEKDIYLYINSPGGSVTAGMAIYDTMNFVKADVQTIVM---GMAA 97 Query: 409 SGGYWISTPAN--YIVANPSTLTGSIGIFGVITTVENSLDSIGVHTDGVSTSPLADVSIT 466 S G ++ T A P+ I + + G T+ Sbjct: 98 SMGSFLLTAGTKGKRFALPNA---------EIMIHQPLGGAQGQATE------------- 135 Query: 467 RALPPEAQLMMQLSIENGYKRFITLVADARHSTPEQIDKIAQGHVW-TGQDAKANGLVDS 525 + A+ ++Q +R ++A+ E I+K + T + AKA GL+D Sbjct: 136 --IEIAARHILQTR-----ERLNKILAERTGQPLEVIEKDTDRDNYMTAEQAKAYGLIDE 188 Query: 526 L 526 + Sbjct: 189 V 189 >4JCT-A nrPDB Length = 209 Score = 37.4 bits (85), Expect = 0.019, Method: Composition-based stats. Identities = 49/226 (21%), Positives = 86/226 (38%), Gaps = 48/226 (21%) Query: 303 KTDKNYRAISYYDYALKTPADTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLD 362 +T + RA Y LK D I ++ G+ +D V DA+ Sbjct: 10 QTSRGERAYDIYSRLLK------DRIIML---GSAIDDNVANSIVSQLLFL----DAQDP 56 Query: 363 PKVKAIVLRVNSPGGSVTASEVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPAN-YI 421 K I L +NSPGGS++A I + +A + + MG A+ G + ++ AN Sbjct: 57 E--KDIFLYINSPGGSISAGMAIYDTMNFVKADVQTI--GMGMAASMGSFLLTAGANGKR 112 Query: 422 VANPSTLTGSIGIFGVITTVENSLDSIGVHTDGVSTSPLADVSITRALPPEAQLMMQLSI 481 A P+ I + + G T+ + A+ ++++ Sbjct: 113 FALPNA---------EIMIHQPLGGAQGQATE---------------IEIAARHILKIK- 147 Query: 482 ENGYKRFITLVADARHSTPEQIDKIAQ-GHVWTGQDAKANGLVDSL 526 +R T++A+ E I + + T Q+AK GL+D + Sbjct: 148 ----ERMNTIMAEKTGQPYEVIARDTDRDNFMTAQEAKDYGLIDDI 189 >3KTI-A nrPDB Length = 199 Score = 37.4 bits (85), Expect = 0.019, Method: Composition-based stats. Identities = 32/118 (27%), Positives = 48/118 (40%), Gaps = 18/118 (15%) Query: 303 KTDKNYRAISYYDYALKTPADTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLD 362 +T++ RA Y LK D I ++ G+ +D V A D Sbjct: 9 QTNRGERAYDIYSRLLK------DRIIML---GSAIDDNVANSIVSQLLFL-----AAED 54 Query: 363 PKVKAIVLRVNSPGGSVTASEVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANY 420 P+ K I L +NSPGGS+TA I + + + + GMAAS G ++ Sbjct: 55 PE-KEISLYINSPGGSITAGMAIYDTMQFIKPKVSTICI---GMAASMGAFLLAAGEK 108 >3QWD-A nrPDB Length = 203 Score = 36.2 bits (82), Expect = 0.038, Method: Composition-based stats. Identities = 44/199 (22%), Positives = 71/199 (35%), Gaps = 39/199 (19%) Query: 304 TDKNYRAISYYDYALKTPADTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDP 363 T++ RA Y LK D I ++ G+ +D V Q +D+ D Sbjct: 11 TNRGERAYDIYSRLLK------DRIIML---GSQIDDNVANSIVSQLLFL-QAQDSEKD- 59 Query: 364 KVKAIVLRVNSPGGSVTASEVIRAELAAARAAGKPVVVSMGGMAASGGYWI--STPANYI 421 I L +NSPGGSVTA I + + + + + GMAAS G ++ + Sbjct: 60 ----IYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICI---GMAASMGSFLLAAGAKGKR 112 Query: 422 VANPST-------LTGSIGIFGVITTVEN------------SLDSIGVHTDGVSTSPLAD 462 A P+ L G+ G I N + G + + D Sbjct: 113 FALPNAEVMIHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRD 172 Query: 463 VSITRALPPEAQLMMQLSI 481 +T E L+ ++ + Sbjct: 173 NFLTAEEAKEYGLIDEVMV 191 >1DGJ-A nrPDB Length = 907 Score = 35.5 bits (80), Expect = 0.078, Method: Composition-based stats. Identities = 46/228 (20%), Positives = 79/228 (34%), Gaps = 30/228 (13%) Query: 255 FPGAQGLLEGLTKTGGDTAKYALENKLVDALASSAEIEKALTKEFGWSKTDKN---YRAI 311 P A + GL + G D A EN L ALA A++ AL K S+ +K Y+ + Sbjct: 182 RPSAVAKVTGLAEFGADAALRMPENTLHLALA-QAKVSHALIKGIDTSEAEKMPGVYKVL 240 Query: 312 SYYDYALKT--------PADTGDSIGVVFANGA-IMDGEETQGNVGGDTTA---AQIRDA 359 ++ D K P + GD N + I + V D+ A A Sbjct: 241 THKDVKGKNRITGLITFPTNKGDGWERPILNDSKIFQYGDALAIVCADSEANARAAAEKV 300 Query: 360 RLDPKVKAIVLRVNSPGGSVTASEVIRA--------ELAAARAAGKPVVVSMGGMAASGG 411 + D ++ + +++P + I +L P + A G Sbjct: 301 KFD--LELLPEYMSAPEAMAPDAIEIHPGTPNVYYDQLEEKGEDTVPFFNDPANVVAEGS 358 Query: 412 YWISTPANYIVANPSTLTGSIGIFGVITTVENSLDSIGVHTDGVSTSP 459 Y+ + ++ P G I G + S+ +H + +P Sbjct: 359 YY-TQRQPHLPIEPDVGYGYINEQGQVVIHSK---SVAIHLHALMIAP 402 >1Y7O-A nrPDB Length = 218 Score = 34.3 bits (77), Expect = 0.14, Method: Composition-based stats. Identities = 30/118 (25%), Positives = 48/118 (40%), Gaps = 18/118 (15%) Query: 303 KTDKNYRAISYYDYALKTPADTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLD 362 +T + R+ Y LK ++ G + D ++ AQ+ Sbjct: 28 QTSRGERSYDIYSRLLKD--------RIIMLTGPVEDNM-------ANSVIAQLLFLDAQ 72 Query: 363 PKVKAIVLRVNSPGGSVTASEVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANY 420 K I L VN+PGGSV+A I + +A + +V+ GMAAS G I++ Sbjct: 73 DSTKDIYLYVNTPGGSVSAGLAIVDTMNFIKADVQTIVM---GMAASMGTVIASSGAK 127 >4BGV-A nrPDB Length = 323 Score = 33.5 bits (75), Expect = 0.28, Method: Composition-based stats. Identities = 25/90 (27%), Positives = 42/90 (46%), Gaps = 7/90 (7%) Query: 131 MQYIGKALKEFRDSGKPVYAVGENYSQGQYYLASFANKIWLSPQGVVDLHGFATNGLYYK 190 M+ +G+A+K++ K V V N + Y A+ I SP+ ++ L G + + Sbjct: 104 MKSVGEAIKKYSPESKIV--VVTNPADIMAYAIYKASGI--SPERIIGLGGSLDSTRFRT 159 Query: 191 SLLDKLKVSTH---VFRVGTYKSAVEPFIR 217 L +L VS F +G + + PFIR Sbjct: 160 FLAQELNVSFEDVNAFVIGGHGDDMVPFIR 189 >6IUM-B nrPDB Length = 701 Score = 33.5 bits (75), Expect = 0.28, Method: Composition-based stats. Identities = 24/111 (21%), Positives = 44/111 (39%), Gaps = 15/111 (13%) Query: 326 DSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIVL----RVNSPGGSVTA 381 D + V+ + ++G +G + A D VKAIV+ + S G + Sbjct: 9 DGVAVITLDNPPVNGLGHSTRLG---IVEGMTRALDDAAVKAIVITGAGKAFSGGADIRE 65 Query: 382 --------SEVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVAN 424 + + + + KPVV ++ +A GG ++ NY VA+ Sbjct: 66 FNTPKAMQEPTLHSVIRVLEGSSKPVVAAVHSVAMGGGLELALGCNYRVAS 116 >3OME-A nrPDB Length = 282 Score = 33.5 bits (75), Expect = 0.30, Method: Composition-based stats. Identities = 30/140 (21%), Positives = 50/140 (35%), Gaps = 29/140 (20%) Query: 310 AISYYDYALKTPADTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIV 369 ++ Y DY + DSI + N + + D A A D +VK I+ Sbjct: 21 SMVYIDYGV------ADSIATITLNRPEAANAQNPELL--DELDAAWTRAAEDNEVKVII 72 Query: 370 LRVN----SPGGSVTASEVIRAELAAA-----------------RAAGKPVVVSMGGMAA 408 LR N S G + + +++ R KP + ++ G Sbjct: 73 LRANGKHFSAGHDLRGGGEVPEKISLEFIIQHEARRYLDYTLRWRNVPKPSIAAVQGRCI 132 Query: 409 SGGYWISTPANYIVANPSTL 428 SGG + P + I+A+ L Sbjct: 133 SGGLLLCWPCDLILASDDAL 152 >5UJS-A nrPDB Length = 442 Score = 33.1 bits (74), Expect = 0.39, Method: Composition-based stats. Identities = 29/127 (22%), Positives = 48/127 (37%), Gaps = 16/127 (12%) Query: 322 ADTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIVL----------- 370 AD I ++ GA ++ + + +T I + K++A +L Sbjct: 72 ADIKTLISLLENLGAKVNFQNNSALLNTNTLNQTIAKYDIVRKMRASILTLGPLLARFGH 131 Query: 371 -RVNSPGGSVTASEVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLT 429 V+ PGG I L A G + + G + ASG + N I+ + T+T Sbjct: 132 CEVSLPGGCAIGQRPIDLHLLALEKMGANIQIKQGYVVASG----NLKGNEILFDKITVT 187 Query: 430 GSIGIFG 436 GS I Sbjct: 188 GSENIIM 194 >1NZY-B nrPDB Length = 269 Score = 32.4 bits (72), Expect = 0.54, Method: Composition-based stats. Identities = 31/144 (21%), Positives = 55/144 (38%), Gaps = 32/144 (22%) Query: 322 ADTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQ--IRDARLDPKVKAIVLRVNSPGGSV 379 A+ DS+G V GA D A +R+ LD V + R + ++ Sbjct: 42 AEEDDSVGAVMITGA------------EDAFCAGFYLREIPLDKGVAGV--RDHFRIAAL 87 Query: 380 TASEVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLTGSIGIFGVIT 439 ++I + R PV+ ++ G+AA GG IS ++ + I Sbjct: 88 WWHQMIHKIIRVKR----PVLAAINGVAAGGGLGISLASD------------MAICADSA 131 Query: 440 TVENSLDSIGVHTDGVSTSPLADV 463 + +IG+ D ++ LA + Sbjct: 132 KFVCAWHTIGIGNDTATSYSLARI 155 >5G1S-A nrPDB Length = 201 Score = 32.4 bits (72), Expect = 0.55, Method: Composition-based stats. Identities = 29/113 (25%), Positives = 42/113 (37%), Gaps = 19/113 (16%) Query: 303 KTDKNYRAISYYDYALKTPADTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLD 362 KT RA Y LK +VF NG + D + AQ+ + Sbjct: 13 KTAGGERAFDIYSRLLKE--------RIVFLNGEVNDHS-------ANLVIAQLLFLESE 57 Query: 363 PKVKAIVLRVNSPGGSVTASEVIRAELAAARAAGKPVVV----SMGGMAASGG 411 K I +NSPGG VTA + + + + + SMG + +GG Sbjct: 58 DPDKDIYFYINSPGGMVTAGMGVYDTMQFIKPDVSTICIGLAASMGSLLLAGG 110 >5HXA-A nrPDB Length = 483 Score = 32.4 bits (72), Expect = 0.66, Method: Composition-based stats. Identities = 18/80 (22%), Positives = 31/80 (38%), Gaps = 14/80 (17%) Query: 467 RALPPEAQLM--------MQLSIENGYKRFITLVADARHSTPEQIDKIAQGHVWTGQDAK 518 R +PP +L+ + + + F+ + +H T + G V Sbjct: 173 RTIPPHEELVKAMCSYDVIGFQTDADRQSFVDFIERGQHGTSSE-----DGMVHAYNRFL 227 Query: 519 ANGLVDSLGDFDDAVAKAAE 538 G +G + DA+AKAAE Sbjct: 228 KVGAY-PIGIYPDAIAKAAE 246 >3EBV-A nrPDB Length = 302 Score = 32.4 bits (72), Expect = 0.66, Method: Composition-based stats. Identities = 33/136 (24%), Positives = 54/136 (39%), Gaps = 4/136 (2%) Query: 350 DTTAAQIRDARLDPKVKAIVLRVNSPGGSVTASEVIRAELAAARAAGKPVVVSMGGMAAS 409 D A DA P A+ ++S G + +A++ A +AAGK V++S+GG + Sbjct: 31 DIIAVAFADATTTP--GAVTFNLDSAGLGGYTVDQFKADVRAKQAAGKKVIISVGGEKGT 88 Query: 410 GGYWISTPANYIVANPSTLTGSIGIFGVITTVENSLDSIGVHTDGVSTSPLADVSITRAL 469 S A + ++ G GV +EN L+ + + S A L Sbjct: 89 VSVNSSASATNFANSVYSVMREYGFDGVDIDLENGLNPTYMTQALRALSAKA--GPDMIL 146 Query: 470 PPEAQLMMQLSIENGY 485 Q + S + GY Sbjct: 147 TMAPQTIDMQSTQGGY 162 >3L6V-A nrPDB Length = 370 Score = 32.4 bits (72), Expect = 0.66, Method: Composition-based stats. Identities = 47/250 (18%), Positives = 88/250 (35%), Gaps = 33/250 (13%) Query: 221 SPAAREADSRWIGELWQNYLNTVAANR-------QIPAEQVFPGAQGLLEGLTKTGGDTA 273 + D W+ L ++ + Q+P + ++ + G+ Sbjct: 42 TKEEDFIDQLWLVNTHDTLLTFTSSGKVFWLPVHQLPEAGSNARGRPIINWIPLESGERV 101 Query: 274 KYAL------ENKLVDALASSAEIEKALTKEFGWSKTDKNYRAISY--YDYALKTPADTG 325 + L +N+ V + ++K EF + + + AI+ D + G Sbjct: 102 QAVLPVREYADNRYVFMATRNGTVKKTPLSEFAF-RLARGKIAINLDEGDALVGVALTDG 160 Query: 326 DSIGVVFANG--AIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIVLRVNSPGGSVTA-- 381 D ++FA+ + GE T ++G TA +R RL + + L V+ G V Sbjct: 161 DRDVLLFASNGKTVRFGESTVRSMG--RTATGVRGIRLAKGEEVVSLIVSERAGGVEDEV 218 Query: 382 SEVIRAELAAARAAGKPVVVSMGG--------MAASGGYWISTPANYIVANPSTLTGSIG 433 + E+ +P V+ + A GY TP + P G+ G Sbjct: 219 EDESAEEVVETTDGAEPAVIDVADNGDVAYILTATENGYGKRTP---LAEYPRKGRGTQG 275 Query: 434 IFGVITTVEN 443 + G+ TT N Sbjct: 276 VIGIQTTERN 285 >2HW5-A nrPDB Length = 286 Score = 32.0 bits (71), Expect = 0.77, Method: Composition-based stats. Identities = 27/140 (19%), Positives = 48/140 (34%), Gaps = 23/140 (16%) Query: 314 YDYALKTPADTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIVL--- 370 ++Y + +++G++ N G + D ++ DP V AIVL Sbjct: 29 FEYIIAEKRGKNNTVGLIQLNRPKALNALCDGLI--DELNQALKIFEEDPAVGAIVLTGG 86 Query: 371 -RVNSPGGSVTA----------SEVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPAN 419 + + G + S KPV+ ++ G A GG ++ + Sbjct: 87 DKAFAAGADIKEMQNLSFQDCYSSKFLKHWDHLTQVKKPVIAAVNGYAFGGGCELAMMCD 146 Query: 420 YI-------VANPSTLTGSI 432 I A P L G+I Sbjct: 147 IIYAGEKAQFAQPEILIGTI 166 >5CB6-A nrPDB Length = 197 Score = 32.0 bits (71), Expect = 0.81, Method: Composition-based stats. Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 7/64 (10%) Query: 262 LEGLTKTGGDTAKYALENKLVDA-----LASSAEIEKALTKEFGWSKTDK--NYRAISYY 314 L GL+ G T +ALE KL D+ + + LTK G+SK D+ N R I + Sbjct: 30 LTGLSGAGKTTITHALEKKLRDSGYRLEVLDGDVVRTNLTKGLGFSKEDRDTNIRRIGFV 89 Query: 315 DYAL 318 + L Sbjct: 90 SHLL 93 >2ZL3-A nrPDB Length = 196 Score = 31.6 bits (70), Expect = 0.92, Method: Composition-based stats. Identities = 46/226 (20%), Positives = 78/226 (34%), Gaps = 50/226 (22%) Query: 304 TDKNYRAISYYDYALKTPADTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDP 363 TD+ R+ Y LK +V +G I D + AQ+ + Sbjct: 12 TDRGERSYDIYSRLLKD--------RIVLLSGEINDSVASS-------IVAQLLFLEAED 56 Query: 364 KVKAIVLRVNSPGGSVTASEVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPAN-YIV 422 K I L +NSPGG +T+ I + R + + G AA G + +S A Sbjct: 57 PEKDIGLYINSPGGVITSGLSIYDTMNFIRPDVSTICI--GQAAAMGAFLLSCGAKGKRF 114 Query: 423 ANPSTLTGSIGIFGVITTVENSLDSIGVHTD-GVSTSPLADVSITRALPPEAQLMMQLSI 481 + P + I +H G + +D+ I + +M Sbjct: 115 SLPHS-------------------RIMIHQPLGGAQGQASDIEIISNEILRLKGLMNS-- 153 Query: 482 ENGYKRFITLVADARHSTPEQIDKIAQGHVW-TGQDAKANGLVDSL 526 ++A + EQI K + + ++AK GL+D + Sbjct: 154 ---------ILAQNSGQSLEQIAKDTDRDFYMSAKEAKEYGLIDKV 190 >6MX2-A nrPDB Length = 194 Score = 31.6 bits (70), Expect = 1.1, Method: Composition-based stats. Identities = 20/83 (24%), Positives = 32/83 (38%), Gaps = 8/83 (9%) Query: 338 MDGEETQGNVGGDTTAAQIRDARLDPKVKAIVLRVNSPGGSVTASEVIRAELAAARAAGK 397 + T G + + D D I L +NSPGGS+T+ I + + Sbjct: 35 QVNDATAGLIVAQLLFLEAEDPDKD-----IHLYINSPGGSITSGMAIYDTMQYIKPDVS 89 Query: 398 PVVVSMGGMAASGGYWISTPANY 420 + + GMAAS G ++ Sbjct: 90 TICI---GMAASMGAFLLAAGAK 109 >3MT6-R nrPDB Length = 207 Score = 31.2 bits (69), Expect = 1.2, Method: Composition-based stats. Identities = 27/116 (23%), Positives = 44/116 (37%), Gaps = 17/116 (14%) Query: 303 KTDKNYRAISYYDYALKTPADTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLD 362 +T + R+ Y LK V+F G + D + AQ+ + Sbjct: 23 QTSRGERSFDIYSRLLKE--------RVIFLTGQVEDHM-------ANLIVAQMLFLEAE 67 Query: 363 PKVKAIVLRVNSPGGSVTASEVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPA 418 K I L +NSPGG +TA I + + + MG A+ G + ++ A Sbjct: 68 NPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTI--CMGQAASMGAFLLTAGA 121 >1XTB-A nrPDB Length = 558 Score = 31.2 bits (69), Expect = 1.5, Method: Composition-based stats. Identities = 16/82 (19%), Positives = 32/82 (39%), Gaps = 15/82 (18%) Query: 69 DKPDSSQRFSKLSRQLLGASSDRLQENSLFDIVNTIRQAKDDRNITGIVMDLKNFAGGDQ 128 ++P +S F+KL+ +LGA + + G+V D+ +F Sbjct: 471 NRPTNSIVFTKLTPFILGALIAMYEHKIF---------------VQGVVWDINSFDQWGV 515 Query: 129 PSMQYIGKALKEFRDSGKPVYA 150 + + K ++ D PV + Sbjct: 516 ELGKQLAKKIEPELDGSSPVTS 537 >4E4G-A nrPDB Length = 521 Score = 30.8 bits (68), Expect = 1.6, Method: Composition-based stats. Identities = 17/83 (20%), Positives = 33/83 (39%), Gaps = 6/83 (7%) Query: 418 ANYIVANPSTLTGSIGIFGVITTVENSLDSIGVHTDGVSTSPL----ADVSITRALPPEA 473 A Y A + S+ + T +D + + + P AD+ + EA Sbjct: 295 AGYGSAGERCMAISVAVPVGEETANRLIDKLVPMVESLRIGPYTDEKADMGPV--VTKEA 352 Query: 474 QLMMQLSIENGYKRFITLVADAR 496 + ++ I++G ++ LV D R Sbjct: 353 EQRIRSLIDSGIEQGAKLVVDGR 375 >2PGN-A nrPDB Length = 589 Score = 30.8 bits (68), Expect = 1.8, Method: Composition-based stats. Identities = 31/98 (31%), Positives = 42/98 (42%), Gaps = 22/98 (22%) Query: 350 DTTAAQIRDARLDPKVKAIVLRVNSPGGSVTASEVIRAELAAARAA-------GKPVVVS 402 D TA QI D KA+V P G+ A V+ A R A PV+++ Sbjct: 165 DLTADQIDD-------KALV-----PRGATRAKSVLHAPNEDVREAAAQLVAAKNPVILA 212 Query: 403 MGGMAASGGYWISTPANYIVANP--STLTGSIGIFGVI 438 GG+A SGG +V P +T TG+ G+F Sbjct: 213 GGGVARSGGSEALLKLAEMVGVPVVTTSTGA-GVFPET 249 >1PZ1-A nrPDB Length = 333 Score = 30.8 bits (68), Expect = 1.9, Method: Composition-based stats. Identities = 21/85 (24%), Positives = 33/85 (38%), Gaps = 7/85 (8%) Query: 66 VIVDKPDSSQRFSKLSRQLLGASSDRLQENSLFDIVNTIRQAKDDRNITGIVMDLKNFAG 125 I D + R + + G E + + TIR A D GI + A Sbjct: 5 SIADTGIEASRIGLGTWAIGGTMWGGTDEKT---SIETIRAALD----QGITLIDTAPAY 57 Query: 126 GDQPSMQYIGKALKEFRDSGKPVYA 150 G S + +GKA+KE+ + + A Sbjct: 58 GFGQSEEIVGKAIKEYMKRDQVILA 82 >1GZD-A nrPDB Length = 557 Score = 30.5 bits (67), Expect = 2.2, Method: Composition-based stats. Identities = 15/82 (18%), Positives = 32/82 (39%), Gaps = 15/82 (18%) Query: 69 DKPDSSQRFSKLSRQLLGASSDRLQENSLFDIVNTIRQAKDDRNITGIVMDLKNFAGGDQ 128 ++P +S F+KL+ +LGA + + G++ D+ +F Sbjct: 470 NRPTNSIVFTKLTPFILGALIAMYEHKIF---------------VQGVIWDINSFDQWGV 514 Query: 129 PSMQYIGKALKEFRDSGKPVYA 150 + + K ++ D PV + Sbjct: 515 ELGKQLAKKIEPELDGSSPVTS 536 >3MJF-A nrPDB Length = 431 Score = 30.5 bits (67), Expect = 2.3, Method: Composition-based stats. Identities = 29/104 (27%), Positives = 40/104 (38%), Gaps = 4/104 (3%) Query: 345 GNVGGDTTAAQIRDARLDPKVKAIVLRVNSPGGSVTASEVIRAELAAARAAGKPVVVSMG 404 G AAQ+ ++ K + R N P + A LA R G P+V+ Sbjct: 93 AIFGPTQAAAQLEGSK--AFTKDFLARHNIPSAEYQNFTDVEAALAYVRQKGAPIVIKAD 150 Query: 405 GMAASGGYWIS-TPANYIVANPSTLTG-SIGIFGVITTVENSLD 446 G+AA G ++ T A L G + G G VE LD Sbjct: 151 GLAAGKGVIVAMTQEEAETAVNDMLAGNAFGDAGHRIVVEEFLD 194 >6EEP-A nrPDB Length = 218 Score = 30.5 bits (67), Expect = 2.4, Method: Composition-based stats. Identities = 18/64 (28%), Positives = 27/64 (42%), Gaps = 5/64 (7%) Query: 141 FRDSGKPVYAVGENYSQGQYYLASFANKIWLSPQGVVDLH----GFATNGLYYKSLLDKL 196 + G P Y G G L F N + +P + D G NG++ K L DK+ Sbjct: 148 VKLGGDPEYREGFVTDNGNIILDVF-NLSFSTPMALEDSLNVIPGVVENGVFAKRLADKV 206 Query: 197 KVST 200 V++ Sbjct: 207 LVAS 210 >3CLW-A nrPDB Length = 507 Score = 30.1 bits (66), Expect = 2.8, Method: Composition-based stats. Identities = 26/132 (19%), Positives = 48/132 (36%), Gaps = 8/132 (6%) Query: 246 NRQIPAEQVFPGAQGLLEGLTKTGGDTAKYALENKLVDALASSAEIEKALTKEFGWSKTD 305 + P E+ A L + G+ AL N V+ A S E +A + W++T+ Sbjct: 34 GKNWPQEKKEKIADLLFKREFDEKGNPIGMALTNWRVNIGAGSYENREAKEVDNSWNRTE 93 Query: 306 KNYRAISYYDYA--------LKTPADTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIR 357 YD+ +K + G + + F N A + V D ++ Sbjct: 94 CFLSPDGKYDFTKQAGQQWFMKAARERGMNNFLFFTNSAPYFMTRSASTVSTDQDCINLQ 153 Query: 358 DARLDPKVKAIV 369 + + D + +V Sbjct: 154 NDKFDDFARFLV 165 >4JWV-A nrPDB Length = 278 Score = 30.1 bits (66), Expect = 3.0, Method: Composition-based stats. Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 7/50 (14%) Query: 396 GKPVVVSMGGMAASGGYWISTPANYIVAN-------PSTLTGSIGIFGVI 438 KP+V ++ G GG+ ++ A+ IVA P T G IG GV+ Sbjct: 115 KKPMVAAVQGFCVGGGFELAMCADIIVAADTAQFGLPETKVGIIGECGVV 164 >4JCS-A nrPDB Length = 286 Score = 30.1 bits (66), Expect = 3.1, Method: Composition-based stats. Identities = 19/89 (21%), Positives = 35/89 (39%), Gaps = 19/89 (21%) Query: 356 IRDARLDPKVKAIVL----------------RVNSPGGSVTASEVIRAELA---AARAAG 396 + R D ++ +VL R N G + I+ L G Sbjct: 60 LERVRDDADIRVLVLTSHPGSFCAGGNLHVLRDNLDSGPAYWQQRIKTGLRFIHDMLNLG 119 Query: 397 KPVVVSMGGMAASGGYWISTPANYIVANP 425 +PV+ ++ G A G+ +S A+ ++A+P Sbjct: 120 RPVIAAVDGPAFGAGFALSLTADIVLASP 148 >3X00-A nrPDB Length = 147 Score = 30.1 bits (66), Expect = 3.1, Method: Composition-based stats. Identities = 23/103 (22%), Positives = 33/103 (32%), Gaps = 3/103 (2%) Query: 254 VFPGAQGLLEGL--TKTGGDTAKYALENKLVDALASSAEIEKALTKEFGWSKTDKNYRAI 311 V GA G L G G ++Y L + A A+ AL W KN + Sbjct: 33 VTAGADGALTGTYENAVGNAESRYVLTGRYDSAPATDGS-GTALGWTVAWKNNSKNAHSA 91 Query: 312 SYYDYALKTPADTGDSIGVVFANGAIMDGEETQGNVGGDTTAA 354 + + AD + + +G VG DT Sbjct: 92 TTWSGQYVGGADAKINTQWLLTSGTTNANAWKSTLVGHDTFTK 134 >5NFR-A nrPDB Length = 320 Score = 30.1 bits (66), Expect = 3.2, Method: Composition-based stats. Identities = 11/47 (23%), Positives = 17/47 (36%), Gaps = 3/47 (6%) Query: 174 QGVVDLHGFATNGLYYKSLLDKLKVSTHVFRV---GTYKSAVEPFIR 217 + + + G Y + DKLKVS G + + P R Sbjct: 137 EKICGMAGILDTSRYCSLIADKLKVSAEDVNAVILGGHGDLMVPLQR 183 >1O99-A nrPDB Length = 511 Score = 30.1 bits (66), Expect = 3.2, Method: Composition-based stats. Identities = 32/148 (21%), Positives = 56/148 (37%), Gaps = 14/148 (9%) Query: 81 SRQLLGASSDRLQENSLFDIVNTIRQAKDDRNITGIVMD--LKNFAGGDQPSMQYIGKAL 138 S L G SD + + + +R A + + + + L G Q + QYI + Sbjct: 110 SLHLFGLLSDGGVHSHIHHLYALLRLAAKE-GVKRVYIHGFLDGRDVGPQTAPQYIKELQ 168 Query: 139 KEFRDSGKPVYAVGENYSQGQYYLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLKV 198 ++ ++ Y VGE + Y + +K W + G Y+ D L+ Sbjct: 169 EKIKE-----YGVGEIATLSGRYYSMDRDKRWDRVEKAYRAM-VYGEGPTYR---DPLEC 219 Query: 199 STHVFRVGTYKSAVEP--FIRDDMSPAA 224 ++ G Y V P +R+D P A Sbjct: 220 IEDSYKHGIYDEFVLPSVIVREDGRPVA 247 >3RDS-A nrPDB Length = 153 Score = 30.1 bits (66), Expect = 3.3, Method: Composition-based stats. Identities = 23/103 (22%), Positives = 33/103 (32%), Gaps = 3/103 (2%) Query: 254 VFPGAQGLLEGL--TKTGGDTAKYALENKLVDALASSAEIEKALTKEFGWSKTDKNYRAI 311 V GA G L G + G Y L + A A+ AL W +N + Sbjct: 44 VTAGADGALTGTYESAVGNAEGSYVLTGRYDSAPATDGS-GTALGWTVAWKNNYRNAHSA 102 Query: 312 SYYDYALKTPADTGDSIGVVFANGAIMDGEETQGNVGGDTTAA 354 S + A+ + V+ +G VG DT Sbjct: 103 STWSGQYVGGAEARINTQVLTTSGTTEANAWKSTLVGHDTFTK 145 >5X4Z-H nrPDB Length = 145 Score = 30.1 bits (66), Expect = 3.4, Method: Composition-based stats. Identities = 23/94 (24%), Positives = 31/94 (32%), Gaps = 15/94 (15%) Query: 321 PADTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIVLRVNSPGGSVT 380 P DS+ V AN +DGE+ N + D L ++ G+V Sbjct: 48 PVSQDDSLTVTLANSLSLDGEDESANFSKSWRPPKPTDKSLADDYDYVMF------GTVY 101 Query: 381 ASEVIRAELAAARAAGKPVVVSMGG--MAASGGY 412 + V VS GG M GGY Sbjct: 102 -------KFEEGDEDKIKVYVSFGGLLMCLEGGY 128 >5M6Q-A nrPDB Length = 225 Score = 29.7 bits (65), Expect = 3.9, Method: Composition-based stats. Identities = 26/100 (26%), Positives = 39/100 (39%), Gaps = 11/100 (11%) Query: 199 STHVFRVGTYKSAVEPFIRDDMSPAAREADSRWIGELWQNYLNTVAANRQIPAEQVFPGA 258 S +RV Y A E + +M+ RE L + + N + E + Sbjct: 12 SYRTWRVEDYVEAWERYHGREMTEDERE-------NLARGCIGVTVVN--LNREDLSNPP 62 Query: 259 QGLLEGLTKTGGDTAKYALENKLVDALASSAEIEKALTKE 298 L G +T A A NK+VD S A+ E A+ K+ Sbjct: 63 LNLSFGSLRTA--EAVQAALNKIVDTHPSPAQYEAAVAKD 100 >5DKP-A nrPDB Length = 206 Score = 29.7 bits (65), Expect = 4.0, Method: Composition-based stats. Identities = 34/138 (24%), Positives = 54/138 (39%), Gaps = 22/138 (15%) Query: 303 KTDKNYRAISYYDYALKTPADTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLD 362 ++ + RA Y LK +VF G + D E+ V AQ+ + Sbjct: 16 QSGRGERAFDIYSRLLKE--------RIVFLVGPVTD--ESANLV-----VAQLLFLESE 60 Query: 363 PKVKAIVLRVNSPGGSVTASEVIRAELAAARAAGKPVVV----SMGGM---AASGGYWIS 415 K I +NSPGGSVTA I + + + + SMG A G + Sbjct: 61 NPDKDIFFYINSPGGSVTAGMSIYDTMNFIKPDVSTLCLGQAASMGAFLLSAGEKGKRFA 120 Query: 416 TPANYIVANPSTLTGSIG 433 P + I+ + ++G +G Sbjct: 121 LPNSRIMIHQPLISGGLG 138 >4V03-A nrPDB Length = 257 Score = 29.7 bits (65), Expect = 4.3, Method: Composition-based stats. Identities = 34/203 (16%), Positives = 85/203 (41%), Gaps = 31/203 (15%) Query: 91 RLQENSLFDIVNTIRQ--------AKDDRNITGIVMDLKNFAGGDQPSMQYIGKALKEFR 142 L+ ++DI++ + KD R ++ ++ A D ++ K ++E + Sbjct: 51 GLENRIVYDILDVLEGRVPYEKALVKDKRGLSLWLLPANQRANKDVIDIEKWNKTVEEIK 110 Query: 143 DSGKPVYAVGENYS--QGQYYLA-SFANK--IWLSPQG--------VVDLHGFATNGLYY 189 +SG Y + ++ + + + +A S A+K I ++P+ V+ L + + Y Sbjct: 111 NSGNYDYILVDSPAGIEKGFQIAVSPADKALIVVNPEVSSIRDADRVIGLLE-SMDKRNY 169 Query: 190 KSLLDKLKVSTHVFRVGTYKSAVEPFIRDDMSPAAREADSRWIGELWQNYLNTVAANRQI 249 K +++++K + + G S +D+ + I E ++ I Sbjct: 170 KVIVNRIK--WEMVKRGAMLSV------EDIVDILKAEIIGIIPEE-PKLVDFTNRGEPI 220 Query: 250 PAEQVFPGAQGLLEGLTKTGGDT 272 ++ FP +Q +++ + G++ Sbjct: 221 VLDEKFPASQAIIDTARRLMGES 243 >6AJD-A nrPDB Length = 485 Score = 29.3 bits (64), Expect = 5.8, Method: Composition-based stats. Identities = 25/107 (23%), Positives = 41/107 (38%), Gaps = 10/107 (9%) Query: 307 NYRAISYYDYALKTPADTGDSIGVVFANGAIMDGEETQGNV----GGDTTAAQIRDARLD 362 N +S +++ T +T + GAI G + + G T +A R+D Sbjct: 355 NSGRLSMHEFVALTSTNTAKIFNLFPRKGAIRVGADADLVLWDPQGSRTLSAATHHQRVD 414 Query: 363 ------PKVKAIVLRVNSPGGSVTASEVIRAELAAARAAGKPVVVSM 403 V+ I S G + A+ +RAE A R +P S+ Sbjct: 415 FNIFEGRTVRGIPSHTISQGKLLWAAGDLRAEPGAGRYVERPAYPSV 461 >5VEV-A nrPDB Length = 431 Score = 28.9 bits (63), Expect = 6.3, Method: Composition-based stats. Identities = 25/128 (19%), Positives = 42/128 (32%), Gaps = 6/128 (4%) Query: 337 IMDGEETQGN--VGGDTTAAQIRDARLDPKVKAIVLRVNSPGGSVTASEVIRAELAAARA 394 I+D G G AAQ+ ++ KA +++ N P E A Sbjct: 86 IVDDFRAAGLKIFGPTQYAAQLESSKD--FAKAFMVKYNIPTAQYQTFENADAAHDYVNQ 143 Query: 395 AGKPVVVSMGGMAASGGYWISTPANYIVANPST--LTGSIGIFGVITTVENSLDSIGVHT 452 G P+V+ G+ A G ++ + A L +G G +E+ L Sbjct: 144 KGAPIVIKADGLVAGKGVIVAMTLDEAHAAIDDMLLGNKMGNAGERVVIEDFLQGEEASF 203 Query: 453 DGVSTSPL 460 + Sbjct: 204 IVMVDGNH 211 >4EKV-A nrPDB Length = 159 Score = 28.9 bits (63), Expect = 7.0, Method: Composition-based stats. Identities = 22/103 (21%), Positives = 37/103 (35%), Gaps = 3/103 (2%) Query: 254 VFPGAQGLLEGL--TKTGGDTAKYALENKLVDALASSAEIEKALTKEFGWSKTDKNYRAI 311 V GA G L G + G ++Y L + A A+ AL W +N + Sbjct: 31 VTAGADGALTGTYESAVGNAESRYVLTGRYDSAPATDGS-GTALGWTVAWKNNYRNAHSA 89 Query: 312 SYYDYALKTPADTGDSIGVVFANGAIMDGEETQGNVGGDTTAA 354 + + A+ + + +G +G + VG DT Sbjct: 90 TTWSGQYVGGAEARINTQWLLTSGDSSNGSDGSTLVGCDTFTK 132 >5HJL-A nrPDB Length = 333 Score = 28.9 bits (63), Expect = 7.2, Method: Composition-based stats. Identities = 15/68 (22%), Positives = 27/68 (39%), Gaps = 2/68 (2%) Query: 206 GTYKSAVEPFIRDDMSPAAREADSRWIGELWQNYLNTV--AANRQIPAEQVFPGAQGLLE 263 G K + +++ + + R + E Y +++ +PA +V GLL Sbjct: 29 GALKRMMASHQKEEPTTEQIVSLKRLVSEELTPYASSILLDPEYGLPAIEVKDQKAGLLL 88 Query: 264 GLTKTGGD 271 KTG D Sbjct: 89 AYEKTGYD 96 >4YRY-B nrPDB Length = 468 Score = 28.9 bits (63), Expect = 7.3, Method: Composition-based stats. Identities = 22/104 (21%), Positives = 36/104 (34%), Gaps = 18/104 (17%) Query: 320 TPADTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVK----------AI- 368 TP G + V+ A MD + +G + R + + I Sbjct: 274 TPIRVGKKVAVIGAGNTAMDAARSALRLGAEKVYIVYRRTEREMPARREEYHHALEEGIE 333 Query: 369 -------VLRVNSPGGSVTASEVIRAELAAARAAGKPVVVSMGG 405 + + G+V A E +R EL A +G+P V + G Sbjct: 334 FLWLTLPIRYIGDANGNVEAMECVRMELKEADGSGRPRPVPIEG 377 >2IEX-A nrPDB Length = 272 Score = 28.9 bits (63), Expect = 7.4, Method: Composition-based stats. Identities = 22/94 (23%), Positives = 35/94 (37%), Gaps = 18/94 (19%) Query: 358 DARLDPKVKAIVL--------------RVNSPGGSVTASEVIRAELAAA----RAAGKPV 399 AR D + I+L +V GG V E+ R + R KPV Sbjct: 50 KARDDSNIGVIILTGAGGKAFCSGGDQKVRGHGGYVGEDEIPRLNVLDLQRLIRVIPKPV 109 Query: 400 VVSMGGMAASGGYWISTPANYIVANPSTLTGSIG 433 + + G A GG+ + + +A + + G G Sbjct: 110 IAMVAGYAIGGGHVLHVVCDLTIAADNAIFGQTG 143 >5N8B-A nrPDB Length = 183 Score = 28.5 bits (62), Expect = 9.2, Method: Composition-based stats. Identities = 29/162 (17%), Positives = 49/162 (30%), Gaps = 17/162 (10%) Query: 196 LKVSTHVFRVGTYKSA-VEPFIRDDMSPAAREADSRWIGELWQNYLNTVAANRQIPAEQV 254 + VS + SA + +S A W +L ++ V Sbjct: 9 IAVSLTTVSITASASADPSKDSKAQVSAAEAGITGTWYNQLGSTFI-------------V 55 Query: 255 FPGAQGLLEGL--TKTGGDTAKYALENKLVDALASSAEIEKALTKEFGWSKTDKNYRAIS 312 GA G L G + G ++Y L + A A+ AL W +N + + Sbjct: 56 TAGADGALTGTYESAVGNAESRYVLTGRYDSAPATDGS-GTALGWTVAWKNNYRNAHSAT 114 Query: 313 YYDYALKTPADTGDSIGVVFANGAIMDGEETQGNVGGDTTAA 354 + A+ + + +G VG DT Sbjct: 115 TWSGQYVGGAEARINTQWLLTSGTTEANAWKSTLVGHDTFTK 156 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.313 0.131 0.349 Lambda K H 0.267 0.0403 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 23,160,571 Number of Sequences: 36641 Number of extensions: 930196 Number of successful extensions: 3129 Number of sequences better than 10.0: 55 Number of HSP's better than 10.0 without gapping: 16 Number of HSP's successfully gapped in prelim test: 77 Number of HSP's that attempted gapping in prelim test: 3063 Number of HSP's gapped (non-prelim): 105 length of query: 618 length of database: 10,336,785 effective HSP length: 103 effective length of query: 515 effective length of database: 6,562,762 effective search space: 3379822430 effective search space used: 3379822430 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.5 bits) S2: 62 (28.5 bits)