BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= P07703 (335 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 5LMX-C nrPDB 694 0.0 6F44-C nrPDB 691 0.0 2WB1-D nrPDB 102 3e-22 2PMZ-D nrPDB 100 6e-22 3H0G-C nrPDB 99 4e-21 5IYA-C nrPDB 97 1e-20 5X4Z-C nrPDB 94 1e-19 4QIW-D nrPDB 92 2e-19 3HOY-C nrPDB 86 2e-17 3J0K-C nrPDB 86 2e-17 3QUA-A nrPDB 30 1.1 5MQ0-T nrPDB 30 1.2 4IOX-A nrPDB 29 3.2 5G38-A nrPDB 28 6.3 >5LMX-C nrPDB Length = 380 Score = 694 bits (1790), Expect = 0.0, Method: Compositional matrix adjust. Identities = 335/335 (100%), Positives = 335/335 (100%) Query: 1 MSNIVGIEYNRVTNTTSTDFPGFSKDAENEWNVEKFKKDFEVNISSLDAREANFDLINID 60 MSNIVGIEYNRVTNTTSTDFPGFSKDAENEWNVEKFKKDFEVNISSLDAREANFDLINID Sbjct: 1 MSNIVGIEYNRVTNTTSTDFPGFSKDAENEWNVEKFKKDFEVNISSLDAREANFDLINID 60 Query: 61 TSIANAFRRIMISEVPSVAAEYVYFFNNTSVIQDEVLAHRIGLVPLKVDPDMLTWVDSNL 120 TSIANAFRRIMISEVPSVAAEYVYFFNNTSVIQDEVLAHRIGLVPLKVDPDMLTWVDSNL Sbjct: 61 TSIANAFRRIMISEVPSVAAEYVYFFNNTSVIQDEVLAHRIGLVPLKVDPDMLTWVDSNL 120 Query: 121 PDDEKFTDENTIVLSLNVKCTRNPDAPKGSTDPKELYNNAHVYARDLKFEPQGRQSTTFA 180 PDDEKFTDENTIVLSLNVKCTRNPDAPKGSTDPKELYNNAHVYARDLKFEPQGRQSTTFA Sbjct: 121 PDDEKFTDENTIVLSLNVKCTRNPDAPKGSTDPKELYNNAHVYARDLKFEPQGRQSTTFA 180 Query: 181 DCPVVPADPDILLAKLRPGQEISLKAHCILGIGGDHAKFSPVSTASYRLLPQINILQPIK 240 DCPVVPADPDILLAKLRPGQEISLKAHCILGIGGDHAKFSPVSTASYRLLPQINILQPIK Sbjct: 181 DCPVVPADPDILLAKLRPGQEISLKAHCILGIGGDHAKFSPVSTASYRLLPQINILQPIK 240 Query: 241 GESARRFQKCFPPGVIGIDEGSDEAYVKDARKDTVSREVLRYEEFADKVKLGRVRNHFIF 300 GESARRFQKCFPPGVIGIDEGSDEAYVKDARKDTVSREVLRYEEFADKVKLGRVRNHFIF Sbjct: 241 GESARRFQKCFPPGVIGIDEGSDEAYVKDARKDTVSREVLRYEEFADKVKLGRVRNHFIF 300 Query: 301 NVESAGAMTPEEIFFKSVRILKNKAEYLKNCPITQ 335 NVESAGAMTPEEIFFKSVRILKNKAEYLKNCPITQ Sbjct: 301 NVESAGAMTPEEIFFKSVRILKNKAEYLKNCPITQ 335 >6F44-C nrPDB Length = 335 Score = 691 bits (1784), Expect = 0.0, Method: Compositional matrix adjust. Identities = 335/335 (100%), Positives = 335/335 (100%) Query: 1 MSNIVGIEYNRVTNTTSTDFPGFSKDAENEWNVEKFKKDFEVNISSLDAREANFDLINID 60 MSNIVGIEYNRVTNTTSTDFPGFSKDAENEWNVEKFKKDFEVNISSLDAREANFDLINID Sbjct: 1 MSNIVGIEYNRVTNTTSTDFPGFSKDAENEWNVEKFKKDFEVNISSLDAREANFDLINID 60 Query: 61 TSIANAFRRIMISEVPSVAAEYVYFFNNTSVIQDEVLAHRIGLVPLKVDPDMLTWVDSNL 120 TSIANAFRRIMISEVPSVAAEYVYFFNNTSVIQDEVLAHRIGLVPLKVDPDMLTWVDSNL Sbjct: 61 TSIANAFRRIMISEVPSVAAEYVYFFNNTSVIQDEVLAHRIGLVPLKVDPDMLTWVDSNL 120 Query: 121 PDDEKFTDENTIVLSLNVKCTRNPDAPKGSTDPKELYNNAHVYARDLKFEPQGRQSTTFA 180 PDDEKFTDENTIVLSLNVKCTRNPDAPKGSTDPKELYNNAHVYARDLKFEPQGRQSTTFA Sbjct: 121 PDDEKFTDENTIVLSLNVKCTRNPDAPKGSTDPKELYNNAHVYARDLKFEPQGRQSTTFA 180 Query: 181 DCPVVPADPDILLAKLRPGQEISLKAHCILGIGGDHAKFSPVSTASYRLLPQINILQPIK 240 DCPVVPADPDILLAKLRPGQEISLKAHCILGIGGDHAKFSPVSTASYRLLPQINILQPIK Sbjct: 181 DCPVVPADPDILLAKLRPGQEISLKAHCILGIGGDHAKFSPVSTASYRLLPQINILQPIK 240 Query: 241 GESARRFQKCFPPGVIGIDEGSDEAYVKDARKDTVSREVLRYEEFADKVKLGRVRNHFIF 300 GESARRFQKCFPPGVIGIDEGSDEAYVKDARKDTVSREVLRYEEFADKVKLGRVRNHFIF Sbjct: 241 GESARRFQKCFPPGVIGIDEGSDEAYVKDARKDTVSREVLRYEEFADKVKLGRVRNHFIF 300 Query: 301 NVESAGAMTPEEIFFKSVRILKNKAEYLKNCPITQ 335 NVESAGAMTPEEIFFKSVRILKNKAEYLKNCPITQ Sbjct: 301 NVESAGAMTPEEIFFKSVRILKNKAEYLKNCPITQ 335 >2WB1-D nrPDB Length = 265 Score = 102 bits (253), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 80/269 (29%), Positives = 127/269 (47%), Gaps = 37/269 (13%) Query: 64 ANAFRRIMISEVPSVAAEYVYFFNNTSVIQDEVLAHRIGLVPLKVDPDMLTWVDSNLPDD 123 NA RR + VP ++ + VYF N S + DE+LAHR+ L+P + + T+ P++ Sbjct: 25 VNAIRRAAMLYVPVMSIDDVYFIENNSPLYDEILAHRLALIPFTSEEALDTY---RWPEE 81 Query: 124 EKFTDENTIVLSLNVKCTRNPDA--PKGSTDPKELYNNAHVYARDLKFEPQGRQSTTFAD 181 + CT N + K + + L +Y++D+K E D Sbjct: 82 -------------CIDCTENCEKCYTKIYIEAEALNEPKMLYSKDIKSE----------D 118 Query: 182 CPVVPADPDILLAKLRPGQEISLKAHCILGIGGDHAKFSPVSTASYRLLPQINILQPIKG 241 +VP DI + L Q+ISL+A LG G +HAKF PVS A R P++ IL G Sbjct: 119 PSIVPISGDIPIVLLGANQKISLEARLRLGYGKEHAKFIPVSLAIVRYYPKVEIL----G 174 Query: 242 ESARRFQKCFPPGVIGIDEGSDEAYVKDARKDTVSREVLRYEEFADKVKLGRVRNHFIFN 301 + C P GV + +G + VK+ T+ E LRY +++ V + +I Sbjct: 175 NCEKGATVC-PEGVFELKDG--KLSVKNELACTLCEECLRY--CNGLIRISSVEDKYILE 229 Query: 302 VESAGAMTPEEIFFKSVRILKNKAEYLKN 330 +ES G++ PE I ++ + + K E L+ Sbjct: 230 LESVGSLKPERILLEAGKSIIRKIEELEK 258 >2PMZ-D nrPDB Length = 265 Score = 100 bits (250), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 81/267 (30%), Positives = 127/267 (47%), Gaps = 35/267 (13%) Query: 64 ANAFRRIMISEVPSVAAEYVYFFNNTSVIQDEVLAHRIGLVPLKVDPDMLTWVDSNLPDD 123 NA RR + VP +A + VYF N S + DE+LAHR+ L+P + + T+ P++ Sbjct: 25 VNAIRRASMLYVPIMAVDDVYFIENNSPLYDEILAHRLALIPFMSEEALDTY---RWPEE 81 Query: 124 EKFTDENTIVLSLNVKC-TRNPDAPKGSTDPKELYNNAHVYARDLKFEPQGRQSTTFADC 182 EN KC T+ + +P+ +Y++D+K E D Sbjct: 82 CIECTENC------EKCYTKIYIEAEAPNEPR------MIYSKDIKSE----------DP 119 Query: 183 PVVPADPDILLAKLRPGQEISLKAHCILGIGGDHAKFSPVSTASYRLLPQINILQPIKGE 242 VVP DI + L Q+ISL+A LG G +HAKF PVS + R P++ IL Sbjct: 120 SVVPISGDIPIVLLGTNQKISLEARLRLGYGKEHAKFIPVSLSVVRYYPKVEIL----AN 175 Query: 243 SARRFQKCFPPGVIGIDEGSDEAYVKDARKDTVSREVLRYEEFADKVKLGRVRNHFIFNV 302 + C P GV + +G + VK+ T+ E LRY +++ V + +I + Sbjct: 176 CEKAVNVC-PEGVFELKDG--KLSVKNELSCTLCEECLRY--CNGSIRISFVEDKYILEI 230 Query: 303 ESAGAMTPEEIFFKSVRILKNKAEYLK 329 ES G++ PE I ++ + + K E L+ Sbjct: 231 ESVGSLKPERILLEAGKSIIRKIEELE 257 >3H0G-C nrPDB Length = 297 Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 85/294 (28%), Positives = 138/294 (46%), Gaps = 48/294 (16%) Query: 42 VNISSLDAREANFDLINIDTSIANAFRRIMISEVPSVAAEYVYFFNNTSVIQDEVLAHRI 101 + I ++ +F L N ++AN+ RR++++E+P+VA + V NTSV+ DE LAHR+ Sbjct: 7 ITIRNISKNSVDFVLTNTSLAVANSLRRVVLAEIPTVAIDLVEINVNTSVMPDEFLAHRL 66 Query: 102 GLVPLKV----DPDMLTWVDSNLPDDEKFTDENTIVLSLNVKCTRNPDAPKGSTDPKELY 157 G++PL +P + + D +++ + ++ L LN KCT +G+ + Sbjct: 67 GMIPLDSSNIDEPPPVGLEYTRNCDCDQYCPKCSVELFLNAKCTG-----EGTME----- 116 Query: 158 NNAHVYARDLKFEPQGRQSTTFADCPVVPADPDI---LLAKLRPGQEISLKAHCILGIGG 214 +YARDL S + P++ ADP L+ KLR QEISL+ GI Sbjct: 117 ----IYARDLVV-----SSNSSLGHPIL-ADPKSRGPLICKLRKEQEISLRCIAKKGIAK 166 Query: 215 DHAKFSPVSTASYRLLPQINILQPIKGESARRFQKCFPPGVIGIDEGSDEAYVKDARKDT 274 +HAK+SP S ++ P N LQ + F+ D ++ K+A + Sbjct: 167 EHAKWSPTSAVAFEYDPW-NKLQ----HTDYWFEN---------DADAEWPKSKNADWEE 212 Query: 275 VSREVLRYEEFADKVKLGRVRNHFIFNVESAGAMTPEEIFFKSVRILKNKAEYL 328 RE + F +VES G++ P EI + +RIL+ K L Sbjct: 213 PPRE-------GEPFNFQEEPRRFYMDVESVGSIPPNEIMVQGLRILQEKLAVL 259 >5IYA-C nrPDB Length = 275 Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 82/293 (27%), Positives = 130/293 (44%), Gaps = 46/293 (15%) Query: 42 VNISSLDAREANFDLINIDTSIANAFRRIMISEVPSVAAEYVYFFNNTSVIQDEVLAHRI 101 V I+ L F + N D ++AN+ RR+ I+EVP +A ++V N+SV+ DE +AHR+ Sbjct: 9 VRITELTDENVKFIIENTDLAVANSIRRVFIAEVPIIAIDWVQIDANSSVLHDEFIAHRL 68 Query: 102 GLVPLKVDPDMLTWVDSNLPDDEKFTDENTIVLSLNVKCTRNPDAPKGSTDPKELYNNAH 161 GL+PL D + S E+F E ++ +L+V+C + H Sbjct: 69 GLIPLISDDIVDKLQYSRDCTCEEFCPECSVEFTLDVRCNED--------------QTRH 114 Query: 162 VYARDLKFEPQGRQSTTFADCPVVPAD----PDILLAKLRPGQEISLKAHCILGIGGDHA 217 V +RDL T + P D DIL+ KLR GQE+ L+A+ G G +HA Sbjct: 115 VTSRDLISNSPRVIPVTSRNRDNDPNDYVEQDDILIVKLRKGQELRLRAYAKKGFGKEHA 174 Query: 218 KFSPVSTASYRLLPQINILQPIKGESARRFQKCFPPGVIGIDEGSDEA-YVKDARKDTVS 276 K++P + ++ P N L+ + K +DE +A Y + + + Sbjct: 175 KWNPTAGVAFEYDPD-NALRHTVYPKPEEWPKS---EYSELDEDESQAPYDPNGKPE--- 227 Query: 277 REVLRYEEFADKVKLGRVRNHFIFNVESAGAMTPEEIFFKSVRILKNKAEYLK 329 F +NVES G++ PE I ++ LK K L+ Sbjct: 228 --------------------RFYYNVESCGSLRPETIVLSALSGLKKKLSDLQ 260 >5X4Z-C nrPDB Length = 304 Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 83/298 (27%), Positives = 138/298 (46%), Gaps = 53/298 (17%) Query: 36 FKKDFEVNISSLDAREANFDLINIDTSIANAFRRIMISEVPSVAAEYVYFFNNTSVIQDE 95 K+ +VNI + E L +++ S+AN+ RR M++EVP++A + V NTSV+ DE Sbjct: 1 MSKEPKVNIINAQDDEVELMLSDVNLSLANSLRRTMLAEVPTLAIDLVEIKMNTSVLADE 60 Query: 96 VLAHRIGLVPLKVDPDMLTWVDSNLPDDEKFTDENTIVLSLNVKCTRNPDAPKGSTDPKE 155 ++HR+GL+PL V D+ S E + DE ++VL L+ + + +G+TD Sbjct: 61 FISHRLGLIPL-VSEDVEEMKYSRDCTCEDYCDECSVVLELSAR----HEGEEGTTD--- 112 Query: 156 LYNNAHVYARDLKFEPQGRQSTTFADCPVVPADPD--ILLAKLRPGQEISLKAHCILGIG 213 VY+ L + G + + PV D D ILL KLR QE++++ GI Sbjct: 113 ------VYSSSL-IKVSGPGNLNVGE-PVRRDDYDQGILLCKLRNHQELNIRCIAKKGIA 164 Query: 214 GDHAKFSPVSTASYRLLPQINILQPIKGESARRFQKCFPPGVIGIDEGSDEAYVKDARKD 273 +HAK+SP S ++ P + +D + DA+K+ Sbjct: 165 KEHAKWSPCSAIAFEYDPHNKLKH------------------------TDFWFEVDAKKE 200 Query: 274 TVSREVLRYEE-------FADKVKLGRVRNHFIFNVESAGAMTPEEIFFKSVRILKNK 324 + +EE F K K N F VE+ G++ ++F + ++ L+ K Sbjct: 201 WPDSKYATWEEPPKPGEVFDYKAK----PNRFYMTVETTGSLKANQVFSRGIKTLQEK 254 >4QIW-D nrPDB Length = 259 Score = 92.4 bits (228), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 79/285 (27%), Positives = 130/285 (45%), Gaps = 54/285 (18%) Query: 53 NFDLINIDTSIANAFRRIMISEVPSVAAEYVYFFNNTSVIQDEVLAHRIGLVPLKVDPDM 112 F + +D ANA RR ++SEVP+ A + V F N S + DE++AHR+ ++PL + Sbjct: 15 KFIVSGVDVPFANALRRTILSEVPTFAVDEVEFLENDSALFDEIIAHRLAMIPLTTPHER 74 Query: 113 LTWVDSNLPDDEKFTDENTIVLSLNVKCTRNPDAPKGSTDPKELYNNAHVYARDLKFEPQ 172 + D D+ T+ LSL E VY+ DLK Sbjct: 75 FSL-------DALELDDYTVTLSL------------------EAEGPGMVYSGDLK---- 105 Query: 173 GRQSTTFADCPVVPADPDILLAKLRPGQEISLKAHCILGIGGDHAKFSPVSTASYRLLPQ 232 +D V PA+P+I + KL GQ ++ A+ LG G DHAK+ P Y+ L + Sbjct: 106 ------SSDGDVKPANPNIPIVKLAEGQRLTFNAYARLGRGKDHAKWQP-GFVYYKYLTK 158 Query: 233 INI------LQPIKGESARRFQKCFPPGVIGIDEGSDEAYVKDARKDTVSREVLRYEEFA 286 I++ + +K + RR + ++E +E + + + R ++EE Sbjct: 159 IHVSKDVPDWEELKELAERR--------GLPVEESDEEIVITTIKAFYLPR---KFEEHM 207 Query: 287 DK-VKLGRVRNHFIFNVESAGAMTPEEIFFKSVRILKNKAEYLKN 330 K ++ V F+F VE+ G + EEI +++IL K++ N Sbjct: 208 GKGIREEIVPGSFVFTVETNGELPVEEIVSIALKILMRKSDRFIN 252 >3HOY-C nrPDB Length = 347 Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 73/292 (25%), Positives = 129/292 (44%), Gaps = 52/292 (17%) Query: 41 EVNISSLDAREANFDLINIDTSIANAFRRIMISEVPSVAAEYVYFFNNTSVIQDEVLAHR 100 +V I +F L N+D ++AN+ RR+MI+E+P++A + V NT+V+ DE +AHR Sbjct: 36 QVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHR 95 Query: 101 IGLVPLK-VDPDMLTWVDSNLPDDEKFTDENTIVLSLNVKCTRNPDAPKGSTDPKELYNN 159 +GL+PL+ +D + L + +D D+ ++VL+L E + Sbjct: 96 LGLIPLQSMDIEQLEYSRDCFCEDH--CDKCSVVLTLQAF--------------GESEST 139 Query: 160 AHVYARDLKF--EPQGRQSTTFADCPVVP--ADPDILLAKLRPGQEISLKAHCILGIGGD 215 +VY++DL GR P++ +L+ KLR GQE+ L GI + Sbjct: 140 TNVYSKDLVIVSNLMGRNIGH----PIIQDKEGNGVLICKLRKGQELKLTCVAKKGIAKE 195 Query: 216 HAKFSPVSTASYRLLPQINILQPIKGESARRFQKCFPPGVIGIDEGSDEAYVKDARKDTV 275 HAK+ P + + P + + +D Y +D+ K+ Sbjct: 196 HAKWGPAAAIEFEYDPWNKL------------------------KHTDYWYEQDSAKEWP 231 Query: 276 SREVLRYEE---FADKVKLGRVRNHFIFNVESAGAMTPEEIFFKSVRILKNK 324 + YE+ D + F NVES G++ +++ + + L+ K Sbjct: 232 QSKNCEYEDPPNEGDPFDYKAQADTFYMNVESVGSIPVDQVVVRGIDTLQKK 283 >3J0K-C nrPDB Length = 268 Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 73/292 (25%), Positives = 129/292 (44%), Gaps = 52/292 (17%) Query: 41 EVNISSLDAREANFDLINIDTSIANAFRRIMISEVPSVAAEYVYFFNNTSVIQDEVLAHR 100 +V I +F L N+D ++AN+ RR+MI+E+P++A + V NT+V+ DE +AHR Sbjct: 7 QVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHR 66 Query: 101 IGLVPLK-VDPDMLTWVDSNLPDDEKFTDENTIVLSLNVKCTRNPDAPKGSTDPKELYNN 159 +GL+PL+ +D + L + +D D+ ++VL+L E + Sbjct: 67 LGLIPLQSMDIEQLEYSRDCFCEDH--CDKCSVVLTLQAF--------------GESEST 110 Query: 160 AHVYARDLKF--EPQGRQSTTFADCPVVPADP--DILLAKLRPGQEISLKAHCILGIGGD 215 +VY++DL GR P++ +L+ KLR GQE+ L GI + Sbjct: 111 TNVYSKDLVIVSNLMGRNIGH----PIIQDKEGNGVLICKLRKGQELKLTCVAKKGIAKE 166 Query: 216 HAKFSPVSTASYRLLPQINILQPIKGESARRFQKCFPPGVIGIDEGSDEAYVKDARKDTV 275 HAK+ P + + P + + +D Y +D+ K+ Sbjct: 167 HAKWGPAAAIEFEYDPWNKL------------------------KHTDYWYEQDSAKEWP 202 Query: 276 SREVLRYEE---FADKVKLGRVRNHFIFNVESAGAMTPEEIFFKSVRILKNK 324 + YE+ D + F NVES G++ +++ + + L+ K Sbjct: 203 QSKNCEYEDPPNEGDPFDYKAQADTFYMNVESVGSIPVDQVVVRGIDTLQKK 254 >3QUA-A nrPDB Length = 199 Score = 30.4 bits (67), Expect = 1.1, Method: Compositional matrix adjust. Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 1/67 (1%) Query: 160 AHVYARDLKFEPQGRQSTTFADCPVVPADPDILLAKLRPGQEISLKAHCILGIGGDHAKF 219 A VY D+K E Q RQ C P P++L G I+ + ++ GG+ + Sbjct: 8 ARVYVGDVK-EGQDRQWAVCVYCASGPTHPELLELAAEVGSSIAARGWTLVSGGGNVSAM 66 Query: 220 SPVSTAS 226 V+ A+ Sbjct: 67 GAVAQAA 73 >5MQ0-T nrPDB Length = 877 Score = 30.4 bits (67), Expect = 1.2, Method: Compositional matrix adjust. Identities = 32/106 (30%), Positives = 49/106 (46%), Gaps = 21/106 (19%) Query: 89 TSVIQDEVLAHR------IGLVPLKVDPDMLTWVDSNLPDDEKFTDENTIVLSLNVKCTR 142 +S+++ E HR I V KV P LT +DS D+E+ TDE ++ L VK Sbjct: 134 SSLMKMEREMHRKVWDPVIKFVEEKVLP--LTQLDSTQEDEEESTDEAELINVLLVK--- 188 Query: 143 NPDAPKGSTDPKELYNN--------AHVYARDLKFEPQGRQSTTFA 180 KG +E+ N +H+ R LK PQ +++ + A Sbjct: 189 --GFTKGGFISEEISENGSRGDIWSSHILERYLKVAPQQKRNESLA 232 >4IOX-A nrPDB Length = 286 Score = 28.9 bits (63), Expect = 3.2, Method: Compositional matrix adjust. Identities = 13/32 (40%), Positives = 17/32 (53%) Query: 297 HFIFNVESAGAMTPEEIFFKSVRILKNKAEYL 328 HFI S G M +EI +VR+ + EYL Sbjct: 197 HFIKKFNSGGVMASQEIVSATVRLQTDPVEYL 228 >5G38-A nrPDB Length = 172 Score = 28.1 bits (61), Expect = 6.3, Method: Compositional matrix adjust. Identities = 24/86 (27%), Positives = 36/86 (41%), Gaps = 17/86 (19%) Query: 1 MSNIVGIEYNRVTN-TTSTDFPGFSKDAENEWNVEKFKKDFEVNISSLDAREANFDLINI 59 + N+V VT+ TTSTDF G E+NV K +N++ +D R Sbjct: 97 VKNLVASTQPNVTSITTSTDFKG-------EFNVNGTKGQISLNVAKVDGRTGE------ 143 Query: 60 DTSIANAFRRIMISEVPSVAAEYVYF 85 IA F +S V + V++ Sbjct: 144 ---IAGTFESEQLSNGHEVKIQGVFY 166 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 5LMX-C nrPDB 471 e-133 6F44-C nrPDB 469 e-133 3HOY-C nrPDB 291 3e-79 5X4Z-C nrPDB 289 1e-78 5IYA-C nrPDB 287 6e-78 3J0K-C nrPDB 284 3e-77 3H0G-C nrPDB 278 2e-75 2WB1-D nrPDB 270 7e-73 2PMZ-D nrPDB 267 5e-72 4QIW-D nrPDB 243 7e-65 Sequences not found previously or not previously below threshold: 1HQM-A nrPDB 41 5e-04 4YLN-A nrPDB 41 6e-04 1IW7-A nrPDB 41 9e-04 4MEY-A nrPDB 39 0.003 5ZX3-A nrPDB 36 0.023 6CCE-A nrPDB 35 0.044 4OVR-A nrPDB 33 0.27 3M8U-A nrPDB 31 0.71 >5LMX-C nrPDB Length = 380 Score = 471 bits (1211), Expect = e-133, Method: Composition-based stats. Identities = 335/335 (100%), Positives = 335/335 (100%) Query: 1 MSNIVGIEYNRVTNTTSTDFPGFSKDAENEWNVEKFKKDFEVNISSLDAREANFDLINID 60 MSNIVGIEYNRVTNTTSTDFPGFSKDAENEWNVEKFKKDFEVNISSLDAREANFDLINID Sbjct: 1 MSNIVGIEYNRVTNTTSTDFPGFSKDAENEWNVEKFKKDFEVNISSLDAREANFDLINID 60 Query: 61 TSIANAFRRIMISEVPSVAAEYVYFFNNTSVIQDEVLAHRIGLVPLKVDPDMLTWVDSNL 120 TSIANAFRRIMISEVPSVAAEYVYFFNNTSVIQDEVLAHRIGLVPLKVDPDMLTWVDSNL Sbjct: 61 TSIANAFRRIMISEVPSVAAEYVYFFNNTSVIQDEVLAHRIGLVPLKVDPDMLTWVDSNL 120 Query: 121 PDDEKFTDENTIVLSLNVKCTRNPDAPKGSTDPKELYNNAHVYARDLKFEPQGRQSTTFA 180 PDDEKFTDENTIVLSLNVKCTRNPDAPKGSTDPKELYNNAHVYARDLKFEPQGRQSTTFA Sbjct: 121 PDDEKFTDENTIVLSLNVKCTRNPDAPKGSTDPKELYNNAHVYARDLKFEPQGRQSTTFA 180 Query: 181 DCPVVPADPDILLAKLRPGQEISLKAHCILGIGGDHAKFSPVSTASYRLLPQINILQPIK 240 DCPVVPADPDILLAKLRPGQEISLKAHCILGIGGDHAKFSPVSTASYRLLPQINILQPIK Sbjct: 181 DCPVVPADPDILLAKLRPGQEISLKAHCILGIGGDHAKFSPVSTASYRLLPQINILQPIK 240 Query: 241 GESARRFQKCFPPGVIGIDEGSDEAYVKDARKDTVSREVLRYEEFADKVKLGRVRNHFIF 300 GESARRFQKCFPPGVIGIDEGSDEAYVKDARKDTVSREVLRYEEFADKVKLGRVRNHFIF Sbjct: 241 GESARRFQKCFPPGVIGIDEGSDEAYVKDARKDTVSREVLRYEEFADKVKLGRVRNHFIF 300 Query: 301 NVESAGAMTPEEIFFKSVRILKNKAEYLKNCPITQ 335 NVESAGAMTPEEIFFKSVRILKNKAEYLKNCPITQ Sbjct: 301 NVESAGAMTPEEIFFKSVRILKNKAEYLKNCPITQ 335 >6F44-C nrPDB Length = 335 Score = 469 bits (1206), Expect = e-133, Method: Composition-based stats. Identities = 335/335 (100%), Positives = 335/335 (100%) Query: 1 MSNIVGIEYNRVTNTTSTDFPGFSKDAENEWNVEKFKKDFEVNISSLDAREANFDLINID 60 MSNIVGIEYNRVTNTTSTDFPGFSKDAENEWNVEKFKKDFEVNISSLDAREANFDLINID Sbjct: 1 MSNIVGIEYNRVTNTTSTDFPGFSKDAENEWNVEKFKKDFEVNISSLDAREANFDLINID 60 Query: 61 TSIANAFRRIMISEVPSVAAEYVYFFNNTSVIQDEVLAHRIGLVPLKVDPDMLTWVDSNL 120 TSIANAFRRIMISEVPSVAAEYVYFFNNTSVIQDEVLAHRIGLVPLKVDPDMLTWVDSNL Sbjct: 61 TSIANAFRRIMISEVPSVAAEYVYFFNNTSVIQDEVLAHRIGLVPLKVDPDMLTWVDSNL 120 Query: 121 PDDEKFTDENTIVLSLNVKCTRNPDAPKGSTDPKELYNNAHVYARDLKFEPQGRQSTTFA 180 PDDEKFTDENTIVLSLNVKCTRNPDAPKGSTDPKELYNNAHVYARDLKFEPQGRQSTTFA Sbjct: 121 PDDEKFTDENTIVLSLNVKCTRNPDAPKGSTDPKELYNNAHVYARDLKFEPQGRQSTTFA 180 Query: 181 DCPVVPADPDILLAKLRPGQEISLKAHCILGIGGDHAKFSPVSTASYRLLPQINILQPIK 240 DCPVVPADPDILLAKLRPGQEISLKAHCILGIGGDHAKFSPVSTASYRLLPQINILQPIK Sbjct: 181 DCPVVPADPDILLAKLRPGQEISLKAHCILGIGGDHAKFSPVSTASYRLLPQINILQPIK 240 Query: 241 GESARRFQKCFPPGVIGIDEGSDEAYVKDARKDTVSREVLRYEEFADKVKLGRVRNHFIF 300 GESARRFQKCFPPGVIGIDEGSDEAYVKDARKDTVSREVLRYEEFADKVKLGRVRNHFIF Sbjct: 241 GESARRFQKCFPPGVIGIDEGSDEAYVKDARKDTVSREVLRYEEFADKVKLGRVRNHFIF 300 Query: 301 NVESAGAMTPEEIFFKSVRILKNKAEYLKNCPITQ 335 NVESAGAMTPEEIFFKSVRILKNKAEYLKNCPITQ Sbjct: 301 NVESAGAMTPEEIFFKSVRILKNKAEYLKNCPITQ 335 >3HOY-C nrPDB Length = 347 Score = 291 bits (744), Expect = 3e-79, Method: Composition-based stats. Identities = 75/307 (24%), Positives = 133/307 (43%), Gaps = 51/307 (16%) Query: 30 EWNVEKFKKD-FEVNISSLDAREANFDLINIDTSIANAFRRIMISEVPSVAAEYVYFFNN 88 EW+ + ++ +V I +F L N+D ++AN+ RR+MI+E+P++A + V N Sbjct: 24 EWHEDTGSEEGPQVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIPTLAIDSVEVETN 83 Query: 89 TSVIQDEVLAHRIGLVPLKVDPDMLTWVDSNLPDDEKFTDENTIVLSLNVKCTRNPDAPK 148 T+V+ DE +AHR+GL+PL+ D+ S E D+ ++VL+L Sbjct: 84 TTVLADEFIAHRLGLIPLQS-MDIEQLEYSRDCFCEDHCDKCSVVLTLQAF--------- 133 Query: 149 GSTDPKELYNNAHVYARDL--KFEPQGRQSTTFADCPVVPA--DPDILLAKLRPGQEISL 204 E + +VY++DL GR P++ +L+ KLR GQE+ L Sbjct: 134 -----GESESTTNVYSKDLVIVSNLMGRNIGH----PIIQDKEGNGVLICKLRKGQELKL 184 Query: 205 KAHCILGIGGDHAKFSPVSTASYRLLPQINILQPIKGESARRFQKCFPPGVIGIDEGSDE 264 GI +HAK+ P + + P + + +D Sbjct: 185 TCVAKKGIAKEHAKWGPAAAIEFEYDPWNKL------------------------KHTDY 220 Query: 265 AYVKDARKDTVSREVLRYEE---FADKVKLGRVRNHFIFNVESAGAMTPEEIFFKSVRIL 321 Y +D+ K+ + YE+ D + F NVES G++ +++ + + L Sbjct: 221 WYEQDSAKEWPQSKNCEYEDPPNEGDPFDYKAQADTFYMNVESVGSIPVDQVVVRGIDTL 280 Query: 322 KNKAEYL 328 + K + Sbjct: 281 QKKVASI 287 >5X4Z-C nrPDB Length = 304 Score = 289 bits (738), Expect = 1e-78, Method: Composition-based stats. Identities = 79/296 (26%), Positives = 137/296 (46%), Gaps = 45/296 (15%) Query: 36 FKKDFEVNISSLDAREANFDLINIDTSIANAFRRIMISEVPSVAAEYVYFFNNTSVIQDE 95 K+ +VNI + E L +++ S+AN+ RR M++EVP++A + V NTSV+ DE Sbjct: 1 MSKEPKVNIINAQDDEVELMLSDVNLSLANSLRRTMLAEVPTLAIDLVEIKMNTSVLADE 60 Query: 96 VLAHRIGLVPLKVDPDMLTWVDSNLPDDEKFTDENTIVLSLNVKCTRNPDAPKGSTDPKE 155 ++HR+GL+PL + D+ S E + DE ++VL L+ + + +G+TD Sbjct: 61 FISHRLGLIPLVSE-DVEEMKYSRDCTCEDYCDECSVVLELSAR----HEGEEGTTD--- 112 Query: 156 LYNNAHVYARDLKFEPQGRQSTTFADCPVVPADPD--ILLAKLRPGQEISLKAHCILGIG 213 VY+ L + G + + PV D D ILL KLR QE++++ GI Sbjct: 113 ------VYSSSL-IKVSGPGNLNVGE-PVRRDDYDQGILLCKLRNHQELNIRCIAKKGIA 164 Query: 214 GDHAKFSPVSTASYRLLPQINILQPIKGESARRFQKCFPPGVIGIDEGSDEAYVKDARKD 273 +HAK+SP S ++ P + + +D + DA+K+ Sbjct: 165 KEHAKWSPCSAIAFEYDPHNKL------------------------KHTDFWFEVDAKKE 200 Query: 274 TVSREVLRYEE---FADKVKLGRVRNHFIFNVESAGAMTPEEIFFKSVRILKNKAE 326 + +EE + N F VE+ G++ ++F + ++ L+ K Sbjct: 201 WPDSKYATWEEPPKPGEVFDYKAKPNRFYMTVETTGSLKANQVFSRGIKTLQEKLA 256 >5IYA-C nrPDB Length = 275 Score = 287 bits (733), Expect = 6e-78, Method: Composition-based stats. Identities = 81/299 (27%), Positives = 130/299 (43%), Gaps = 46/299 (15%) Query: 36 FKKDFEVNISSLDAREANFDLINIDTSIANAFRRIMISEVPSVAAEYVYFFNNTSVIQDE 95 + V I+ L F + N D ++AN+ RR+ I+EVP +A ++V N+SV+ DE Sbjct: 3 YANQPTVRITELTDENVKFIIENTDLAVANSIRRVFIAEVPIIAIDWVQIDANSSVLHDE 62 Query: 96 VLAHRIGLVPLKVDPDMLTWVDSNLPDDEKFTDENTIVLSLNVKCTRNPDAPKGSTDPKE 155 +AHR+GL+PL D + S E+F E ++ +L+V+C + Sbjct: 63 FIAHRLGLIPLISDDIVDKLQYSRDCTCEEFCPECSVEFTLDVRCNED------------ 110 Query: 156 LYNNAHVYARDLKFEPQGRQSTTFADCPVVPAD----PDILLAKLRPGQEISLKAHCILG 211 HV +RDL T + P D DIL+ KLR GQE+ L+A+ G Sbjct: 111 --QTRHVTSRDLISNSPRVIPVTSRNRDNDPNDYVEQDDILIVKLRKGQELRLRAYAKKG 168 Query: 212 IGGDHAKFSPVSTASYRLLPQINILQPIKGESARRFQKCFPPGVIGIDEGSDE-AYVKDA 270 G +HAK++P + ++ P N L+ + K +DE + Y + Sbjct: 169 FGKEHAKWNPTAGVAFEYDPD-NALRHTVYPKPEEWPKS---EYSELDEDESQAPYDPNG 224 Query: 271 RKDTVSREVLRYEEFADKVKLGRVRNHFIFNVESAGAMTPEEIFFKSVRILKNKAEYLK 329 + + F +NVES G++ PE I ++ LK K L+ Sbjct: 225 KPE-----------------------RFYYNVESCGSLRPETIVLSALSGLKKKLSDLQ 260 >3J0K-C nrPDB Length = 268 Score = 284 bits (727), Expect = 3e-77, Method: Composition-based stats. Identities = 73/296 (24%), Positives = 127/296 (42%), Gaps = 50/296 (16%) Query: 40 FEVNISSLDAREANFDLINIDTSIANAFRRIMISEVPSVAAEYVYFFNNTSVIQDEVLAH 99 +V I +F L N+D ++AN+ RR+MI+E+P++A + V NT+V+ DE +AH Sbjct: 6 PQVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAH 65 Query: 100 RIGLVPLKVDPDMLTWVDSNLPDDEKFTDENTIVLSLNVKCTRNPDAPKGSTDPKELYNN 159 R+GL+PL+ D+ S E D+ ++VL+L E + Sbjct: 66 RLGLIPLQS-MDIEQLEYSRDCFCEDHCDKCSVVLTLQAF--------------GESEST 110 Query: 160 AHVYARDL--KFEPQGRQSTTFADCPVVPA--DPDILLAKLRPGQEISLKAHCILGIGGD 215 +VY++DL GR P++ +L+ KLR GQE+ L GI + Sbjct: 111 TNVYSKDLVIVSNLMGRNIGH----PIIQDKEGNGVLICKLRKGQELKLTCVAKKGIAKE 166 Query: 216 HAKFSPVSTASYRLLPQINILQPIKGESARRFQKCFPPGVIGIDEGSDEAYVKDARKDTV 275 HAK+ P + + P + + +D Y +D+ K+ Sbjct: 167 HAKWGPAAAIEFEYDPWNKL------------------------KHTDYWYEQDSAKEWP 202 Query: 276 SREVLRYEE---FADKVKLGRVRNHFIFNVESAGAMTPEEIFFKSVRILKNKAEYL 328 + YE+ D + F NVES G++ +++ + + L+ K + Sbjct: 203 QSKNCEYEDPPNEGDPFDYKAQADTFYMNVESVGSIPVDQVVVRGIDTLQKKVASI 258 >3H0G-C nrPDB Length = 297 Score = 278 bits (710), Expect = 2e-75, Method: Composition-based stats. Identities = 79/301 (26%), Positives = 130/301 (43%), Gaps = 46/301 (15%) Query: 36 FKKDFEVNISSLDAREANFDLINIDTSIANAFRRIMISEVPSVAAEYVYFFNNTSVIQDE 95 + + I ++ +F L N ++AN+ RR++++E+P+VA + V NTSV+ DE Sbjct: 1 MDSETHITIRNISKNSVDFVLTNTSLAVANSLRRVVLAEIPTVAIDLVEINVNTSVMPDE 60 Query: 96 VLAHRIGLVPLKV----DPDMLTWVDSNLPDDEKFTDENTIVLSLNVKCTRNPDAPKGST 151 LAHR+G++PL +P + + D +++ + ++ L LN KCT Sbjct: 61 FLAHRLGMIPLDSSNIDEPPPVGLEYTRNCDCDQYCPKCSVELFLNAKCTG--------- 111 Query: 152 DPKELYNNAHVYARDLKFEPQGRQSTTFADCPV--VPADPDILLAKLRPGQEISLKAHCI 209 +YARDL S + P+ P L+ KLR QEISL+ Sbjct: 112 -----EGTMEIYARDLVV-----SSNSSLGHPILADPKSRGPLICKLRKEQEISLRCIAK 161 Query: 210 LGIGGDHAKFSPVSTASYRLLPQINILQPIKGESARRFQKCFPPGVIGIDEGSDEAYVKD 269 GI +HAK+SP S ++ P + + F+ D ++ K+ Sbjct: 162 KGIAKEHAKWSPTSAVAFEYDPWNKL-----QHTDYWFEN---------DADAEWPKSKN 207 Query: 270 ARKDTVSREVLRYEEFADKVKLGRVRNHFIFNVESAGAMTPEEIFFKSVRILKNKAEYLK 329 A + RE + F +VES G++ P EI + +RIL+ K L Sbjct: 208 ADWEEPPRE-------GEPFNFQEEPRRFYMDVESVGSIPPNEIMVQGLRILQEKLAVLV 260 Query: 330 N 330 Sbjct: 261 R 261 >2WB1-D nrPDB Length = 265 Score = 270 bits (689), Expect = 7e-73, Method: Composition-based stats. Identities = 83/289 (28%), Positives = 132/289 (45%), Gaps = 33/289 (11%) Query: 42 VNISSLDAREANFDLINIDTSIANAFRRIMISEVPSVAAEYVYFFNNTSVIQDEVLAHRI 101 +N+ D + + NA RR + VP ++ + VYF N S + DE+LAHR+ Sbjct: 3 INLLHKDDKRIDLVFEGYPLEFVNAIRRAAMLYVPVMSIDDVYFIENNSPLYDEILAHRL 62 Query: 102 GLVPLKVDPDMLTWVDSNLPDDEKFTDENTIVLSLNVKCTRNPDAPKGSTDPKELYNNAH 161 L+P + + T+ P++ EN KC K + + L Sbjct: 63 ALIPFTSEEALDTY---RWPEECIDCTENC------EKC-----YTKIYIEAEALNEPKM 108 Query: 162 VYARDLKFEPQGRQSTTFADCPVVPADPDILLAKLRPGQEISLKAHCILGIGGDHAKFSP 221 +Y++D+K E D +VP DI + L Q+ISL+A LG G +HAKF P Sbjct: 109 LYSKDIKSE----------DPSIVPISGDIPIVLLGANQKISLEARLRLGYGKEHAKFIP 158 Query: 222 VSTASYRLLPQINILQPIKGESARRFQKCFPPGVIGIDEGSDEAYVKDARKDTVSREVLR 281 VS A R P++ IL G + C P GV + +G + VK+ T+ E LR Sbjct: 159 VSLAIVRYYPKVEIL----GNCEKGATVC-PEGVFELKDG--KLSVKNELACTLCEECLR 211 Query: 282 YEEFADKVKLGRVRNHFIFNVESAGAMTPEEIFFKSVRILKNKAEYLKN 330 Y +++ V + +I +ES G++ PE I ++ + + K E L+ Sbjct: 212 Y--CNGLIRISSVEDKYILELESVGSLKPERILLEAGKSIIRKIEELEK 258 >2PMZ-D nrPDB Length = 265 Score = 267 bits (682), Expect = 5e-72, Method: Composition-based stats. Identities = 82/289 (28%), Positives = 129/289 (44%), Gaps = 33/289 (11%) Query: 42 VNISSLDAREANFDLINIDTSIANAFRRIMISEVPSVAAEYVYFFNNTSVIQDEVLAHRI 101 +N+ D + NA RR + VP +A + VYF N S + DE+LAHR+ Sbjct: 3 INLLHKDDTRIDLVFEGYPLEFVNAIRRASMLYVPIMAVDDVYFIENNSPLYDEILAHRL 62 Query: 102 GLVPLKVDPDMLTWVDSNLPDDEKFTDENTIVLSLNVKCTRNPDAPKGSTDPKELYNNAH 161 L+P + + T+ P++ EN KC K + + Sbjct: 63 ALIPFMSEEALDTY---RWPEECIECTENC------EKC-----YTKIYIEAEAPNEPRM 108 Query: 162 VYARDLKFEPQGRQSTTFADCPVVPADPDILLAKLRPGQEISLKAHCILGIGGDHAKFSP 221 +Y++D+K E D VVP DI + L Q+ISL+A LG G +HAKF P Sbjct: 109 IYSKDIKSE----------DPSVVPISGDIPIVLLGTNQKISLEARLRLGYGKEHAKFIP 158 Query: 222 VSTASYRLLPQINILQPIKGESARRFQKCFPPGVIGIDEGSDEAYVKDARKDTVSREVLR 281 VS + R P++ IL + C P GV + +G + VK+ T+ E LR Sbjct: 159 VSLSVVRYYPKVEIL----ANCEKAVNVC-PEGVFELKDG--KLSVKNELSCTLCEECLR 211 Query: 282 YEEFADKVKLGRVRNHFIFNVESAGAMTPEEIFFKSVRILKNKAEYLKN 330 Y +++ V + +I +ES G++ PE I ++ + + K E L+ Sbjct: 212 Y--CNGSIRISFVEDKYILEIESVGSLKPERILLEAGKSIIRKIEELEK 258 >4QIW-D nrPDB Length = 259 Score = 243 bits (620), Expect = 7e-65, Method: Composition-based stats. Identities = 81/297 (27%), Positives = 132/297 (44%), Gaps = 54/297 (18%) Query: 41 EVNISSLDAREANFDLINIDTSIANAFRRIMISEVPSVAAEYVYFFNNTSVIQDEVLAHR 100 E I F + +D ANA RR ++SEVP+ A + V F N S + DE++AHR Sbjct: 3 EFKILEKRPDSIKFIVSGVDVPFANALRRTILSEVPTFAVDEVEFLENDSALFDEIIAHR 62 Query: 101 IGLVPLKVDPDMLTWVDSNLPDDEKFTDENTIVLSLNVKCTRNPDAPKGSTDPKELYNNA 160 + ++PL + + D D+ T+ LSL E Sbjct: 63 LAMIPLTTPHERFSL-------DALELDDYTVTLSL------------------EAEGPG 97 Query: 161 HVYARDLKFEPQGRQSTTFADCPVVPADPDILLAKLRPGQEISLKAHCILGIGGDHAKFS 220 VY+ DLK +D V PA+P+I + KL GQ ++ A+ LG G DHAK+ Sbjct: 98 MVYSGDLK----------SSDGDVKPANPNIPIVKLAEGQRLTFNAYARLGRGKDHAKWQ 147 Query: 221 PVSTASYRLLPQINI------LQPIKGESARRFQKCFPPGVIGIDEGSDEAYVKDARKDT 274 P Y+ L +I++ + +K + RR + ++E +E + + Sbjct: 148 P-GFVYYKYLTKIHVSKDVPDWEELKELAERR--------GLPVEESDEEIVITTIKAFY 198 Query: 275 VSREVLRYEEFADK-VKLGRVRNHFIFNVESAGAMTPEEIFFKSVRILKNKAEYLKN 330 + R+ +EE K ++ V F+F VE+ G + EEI +++IL K++ N Sbjct: 199 LPRK---FEEHMGKGIREEIVPGSFVFTVETNGELPVEEIVSIALKILMRKSDRFIN 252 >1HQM-A nrPDB Length = 313 Score = 41.4 bits (95), Expect = 5e-04, Method: Composition-based stats. Identities = 48/302 (15%), Positives = 85/302 (28%), Gaps = 81/302 (26%) Query: 33 VEKFKKDFEVNISSLDAREANFDLI----NIDTSIANAFRRIMISEVPSVAAEYVYFFNN 88 +E K ++ F L ++ N RRI++S +P A VY Sbjct: 2 LESKLKAPVFTATTQGDHYGEFVLEPLERGFGVTLGNPLRRILLSSIPGTAVTSVYI--- 58 Query: 89 TSVIQDEVLAHRIGLVPLKVDPDMLTWVDSNLPDDEKFTDENTIVLSLNVKCTRNPDAPK 148 E + H +P + + I+L+L R D Sbjct: 59 ------EDVLHEFSTIPGVKEDVVE------------------IILNLKELVVRFLDPRW 94 Query: 149 GSTDPKELYNNAHVYARDLKFEPQGRQSTTFADCPVVPADPDILLAKLRPGQEISLKAHC 208 +T V A D V +PD+ +A L G ++ ++ Sbjct: 95 RTTLILRAEGPKEVRAVDF-----------TPSADVEIMNPDLHIATLEEGGKLYMEVRV 143 Query: 209 ILGIGGDHAKFSPVSTASYRLLPQINILQPIKGESARRFQKCFPPGVIGIDEGSDEAYVK 268 G+G +P A R I +D Sbjct: 144 DRGVG---------------YVP------------AERHGIKDRINAIPVD--------- 167 Query: 269 DARKDTVSREVLRYEEFADKVKLGRVRNHFIFNVESAGAMTPEEIFFKSVRILKNKAEYL 328 + ++ ++ + + + G++TP E ++V ILK Y Sbjct: 168 ---AIFSPVRRVAFQVEDTRLGQRTDLDKLTLRIWTDGSVTPLEALNQAVAILKEHLNYF 224 Query: 329 KN 330 N Sbjct: 225 AN 226 >4YLN-A nrPDB Length = 242 Score = 41.4 bits (95), Expect = 6e-04, Method: Composition-based stats. Identities = 50/304 (16%), Positives = 89/304 (29%), Gaps = 79/304 (25%) Query: 32 NVEKFKKDFEVNISSLDAREANFDLINIDTSIA----NAFRRIMISEVPSVAAEYVYFFN 87 +V +F K V+I + + A L ++ NA RRI++S +P A V Sbjct: 11 SVTEFLKPRLVDIEQVSSTHAKVTLEPLERGFGHTLGNALRRILLSSMPGCAVTEVEI-- 68 Query: 88 NTSVIQDEVLAHRIGLVPLKVDPDMLTWVDSNLPDDEKFTDENTIVLSLNVKCTRNPDAP 147 V+ + + D I+L+L R Sbjct: 69 -DGVLHE-----------YSTKEGVQE-------------DILEILLNLKGLAVRVQGKD 103 Query: 148 KGSTDPKELYNNAHVYARDLKFEPQGRQSTTFADCPVVPADPDILLAKLR-PGQEISLKA 206 + + V A D+ D V P ++ L IS++ Sbjct: 104 EVILTLNKS-GIGPVTAADI-----------THDGDVEIVKPQHVICHLTDENASISMRI 151 Query: 207 HCILGIGGDHAKFSPVSTASYRLLPQINILQPIKGESARRFQKCFPPGVIGIDEGSDEAY 266 G G +P + + E P G + +D Sbjct: 152 KVQRGRG---------------YVPASTRIHSEEDE--------RPIGRLLVD------- 181 Query: 267 VKDARKDTVSREVLRYEEFADKVKLGRVRNHFIFNVESAGAMTPEEIFFKSVRILKNKAE 326 E + Y A +V+ + + +E+ G + PEE ++ IL + E Sbjct: 182 -----ACYSPVERIAYNVEAARVEQRTDLDKLVIEMETNGTIDPEEAIRRAATILAEQLE 236 Query: 327 YLKN 330 + Sbjct: 237 AFVD 240 >1IW7-A nrPDB Length = 315 Score = 40.7 bits (93), Expect = 9e-04, Method: Composition-based stats. Identities = 45/298 (15%), Positives = 85/298 (28%), Gaps = 82/298 (27%) Query: 38 KDFEVNISSLDAREANFDLI----NIDTSIANAFRRIMISEVPSVAAEYVYFFNNTSVIQ 93 K + + F L ++ N RRI++S +P A VY Sbjct: 7 KAPVFTVRTQGREYGEFVLEPLERGFGVTLGNPLRRILLSSIPGTAVTSVYI-------- 58 Query: 94 DEVLAHRIGLVPLKVDPDMLTWVDSNLPDDEKFTDENTIVLSLNVKCTRNPDAP-KGSTD 152 E + H +P + + I+L+L R + + T Sbjct: 59 -EDVLHEFSTIPGVKEDVVE------------------IILNLKELVVRFLNPSLQTVTL 99 Query: 153 PKELYNNAHVYARDLKFEPQGRQSTTFADCPVVPADPDILLAKLRPGQEISLKAHCILGI 212 + V ARD V +PD+ +A L G ++++ G+ Sbjct: 100 LLKAEGPKEVKARDFLPVA-----------DVEIMNPDLHIATLEEGGRLNMEVRVDRGV 148 Query: 213 GGDHAKFSPVSTASYRLLPQINILQPIKGESARRFQKCFPPGVIGIDEGSDEAYVKDARK 272 G +P A + I +D Sbjct: 149 G---------------YVP------------AEKHGIKDRINAIPVD------------A 169 Query: 273 DTVSREVLRYEEFADKVKLGRVRNHFIFNVESAGAMTPEEIFFKSVRILKNKAEYLKN 330 + ++ ++ + + + G++TP E ++V IL+ Y N Sbjct: 170 VFSPVRRVAFQVEDTRLGQRTDLDKLTLRIWTDGSVTPLEALNQAVEILREHLTYFSN 227 >4MEY-A nrPDB Length = 335 Score = 39.1 bits (89), Expect = 0.003, Method: Composition-based stats. Identities = 50/304 (16%), Positives = 89/304 (29%), Gaps = 79/304 (25%) Query: 32 NVEKFKKDFEVNISSLDAREANFDLINIDTSIA----NAFRRIMISEVPSVAAEYVYFFN 87 +V +F K V+I + + A L ++ NA RRI++S +P A V Sbjct: 10 SVTEFLKPRLVDIEQVSSTHAKVTLEPLERGFGHTLGNALRRILLSSMPGCAVTEVEI-- 67 Query: 88 NTSVIQDEVLAHRIGLVPLKVDPDMLTWVDSNLPDDEKFTDENTIVLSLNVKCTRNPDAP 147 V+ + + D I+L+L R Sbjct: 68 -DGVLHE-----------YSTKEGVQE-------------DILEILLNLKGLAVRVQGKD 102 Query: 148 KGSTDPKELYNNAHVYARDLKFEPQGRQSTTFADCPVVPADPDILLAKLR-PGQEISLKA 206 + + V A D+ D V P ++ L IS++ Sbjct: 103 EVILTLNKS-GIGPVTAADI-----------THDGDVEIVKPQHVICHLTDENASISMRI 150 Query: 207 HCILGIGGDHAKFSPVSTASYRLLPQINILQPIKGESARRFQKCFPPGVIGIDEGSDEAY 266 G G +P + + E P G + +D Sbjct: 151 KVQRGRG---------------YVPASTRIHSEEDE--------RPIGRLLVD------- 180 Query: 267 VKDARKDTVSREVLRYEEFADKVKLGRVRNHFIFNVESAGAMTPEEIFFKSVRILKNKAE 326 E + Y A +V+ + + +E+ G + PEE ++ IL + E Sbjct: 181 -----ACYSPVERIAYNVEAARVEQRTDLDKLVIEMETNGTIDPEEAIRRAATILAEQLE 235 Query: 327 YLKN 330 + Sbjct: 236 AFVD 239 >5ZX3-A nrPDB Length = 368 Score = 36.0 bits (81), Expect = 0.023, Method: Composition-based stats. Identities = 42/292 (14%), Positives = 88/292 (30%), Gaps = 81/292 (27%) Query: 36 FKKDFEVNISSLDAREANFDLI----NIDTSIANAFRRIMISEVPSVAAEYVYFFNNTSV 91 + ++ L + F + ++ N+ RR ++S +P A TS+ Sbjct: 24 ISQRPTLSEDVLTDNRSQFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAV--------TSI 75 Query: 92 IQDEVLAHRIGLVPLKVDPDMLTWVDSNLPDDEKFTDENTIVLSLNVKCTRNPDAPKGST 151 D VL H VP + I+L+L + + + Sbjct: 76 RIDGVL-HEFTTVPGVKEDVTE------------------IILNLKSLVVSSEEDEPVTM 116 Query: 152 DPKELYNNAHVYARDLKFEPQGRQSTTFADCPVVPADPDILLAKLRPGQEISLKAHCILG 211 ++ V A D+ P + +P + +A L ++ ++ G Sbjct: 117 YLRK-QGPGEVTAGDIV--PPAGVTVH---------NPGMHIATLNDKGKLEVELVVERG 164 Query: 212 IGGDHAKFSPVSTASYRLLPQINILQPIKGESARRFQKCFPPGVIGIDEGSDEAYVKDAR 271 G A + S A +P +I P+ Sbjct: 165 RGYVPAVQNRASGAEIGRIPVDSIYSPVLK------------------------------ 194 Query: 272 KDTVSREVLRYEEFADKVKLGRVRNHFIFNVESAGAMTPEEIFFKSVRILKN 323 + Y+ A +V+ + I +VE+ +++P + + + L Sbjct: 195 --------VTYKVDATRVEQRTDFDKLILDVETKNSISPRDALASAGKTLVE 238 >6CCE-A nrPDB Length = 350 Score = 35.3 bits (79), Expect = 0.044, Method: Composition-based stats. Identities = 43/292 (14%), Positives = 89/292 (30%), Gaps = 81/292 (27%) Query: 36 FKKDFEVNISSLDAREANFDLI----NIDTSIANAFRRIMISEVPSVAAEYVYFFNNTSV 91 + ++ ++ + F + ++ N+ RR ++S +P A TS+ Sbjct: 3 ISQRPTLSEETVAENRSRFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAV--------TSI 54 Query: 92 IQDEVLAHRIGLVPLKVDPDMLTWVDSNLPDDEKFTDENTIVLSLNVKCTRNPDAPKGST 151 D VL H VP + I+L+L + D + Sbjct: 55 RIDGVL-HEFTTVPGVKEDVTD------------------IILNLKGLVVSSDDDEPVTM 95 Query: 152 DPKELYNNAHVYARDLKFEPQGRQSTTFADCPVVPADPDILLAKLRPGQEISLKAHCILG 211 ++ V A D+ P + +PD+ +A L ++ ++ G Sbjct: 96 YLRK-QGPGVVTAGDIV--PPAGVTVH---------NPDMHIATLNDKGKLEVELVVERG 143 Query: 212 IGGDHAKFSPVSTASYRLLPQINILQPIKGESARRFQKCFPPGVIGIDEGSDEAYVKDAR 271 G A + S A +P +I P+ Sbjct: 144 RGYVPAVQNKASGAEIGRIPVDSIYSPVLK------------------------------ 173 Query: 272 KDTVSREVLRYEEFADKVKLGRVRNHFIFNVESAGAMTPEEIFFKSVRILKN 323 + Y+ A +V+ + I +VE+ +++P + + L Sbjct: 174 --------VTYKVEATRVEQRTDFDKLIIDVETKNSISPRDALASAGGTLVE 217 >4OVR-A nrPDB Length = 322 Score = 32.6 bits (72), Expect = 0.27, Method: Composition-based stats. Identities = 6/64 (9%), Positives = 21/64 (32%) Query: 34 EKFKKDFEVNISSLDAREANFDLINIDTSIANAFRRIMISEVPSVAAEYVYFFNNTSVIQ 93 + F + +V + + D ++ ++ + V + + F + Sbjct: 243 DSFTPEEQVQVRKAAKNSVGYMRQLWDAMEISSREKVEKAGVEVITIDKAPFQAAVQPLY 302 Query: 94 DEVL 97 D+ + Sbjct: 303 DQFV 306 >3M8U-A nrPDB Length = 522 Score = 31.0 bits (68), Expect = 0.71, Method: Composition-based stats. Identities = 25/117 (21%), Positives = 40/117 (34%), Gaps = 21/117 (17%) Query: 19 DFPGFSKDAENEWNVEKFKKDFEVNISSLDAREANFDLINID-TSIANAFRRIMISEVPS 77 DFP N ++EK K D +VN+ S + N + N R ++ Sbjct: 240 DFP-------NAADLEKMKTDPKVNLHSQSGLNIAYIAFNTEKAPFDNVKVRQALNY--- 289 Query: 78 VAAEYVYFFNNTSVIQDEVLAHRIGLVPLKVDPDMLTWVDSNLPDDEKFTDENTIVL 134 A + + I D V +R V K W +N +++ E L Sbjct: 290 -AVD-------KNAIIDAV--YRGAGVAAKNPLPPTIWGYNNEITGYEYSPEKAKQL 336 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.308 0.114 0.281 Lambda K H 0.267 0.0356 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 10,880,363 Number of Sequences: 36641 Number of extensions: 415614 Number of successful extensions: 1135 Number of sequences better than 10.0: 18 Number of HSP's better than 10.0 without gapping: 26 Number of HSP's successfully gapped in prelim test: 8 Number of HSP's that attempted gapping in prelim test: 1060 Number of HSP's gapped (non-prelim): 38 length of query: 335 length of database: 10,336,785 effective HSP length: 98 effective length of query: 237 effective length of database: 6,745,967 effective search space: 1598794179 effective search space used: 1598794179 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.3 bits) S2: 59 (27.5 bits)