BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= P07560 (215 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 3CPH-A nrPDB 429 e-121 2OCY-C nrPDB 347 2e-96 6O62-A nrPDB 261 2e-70 5SZJ-A nrPDB 225 1e-59 5SZI-A nrPDB 223 4e-59 4LHX-A nrPDB 223 4e-59 5SZH-B nrPDB 220 3e-58 5LPN-A nrPDB 218 2e-57 3L0I-B nrPDB 211 2e-55 2RHD-A nrPDB 209 5e-55 2WWX-A nrPDB 207 3e-54 3CUE-F nrPDB 202 8e-53 1YZN-A nrPDB 196 9e-51 3RAB-A nrPDB 195 1e-50 1ZBD-A nrPDB 192 7e-50 3DZ8-A nrPDB 189 1e-48 2GF9-A nrPDB 188 1e-48 4RKF-A nrPDB 186 5e-48 6IF2-B nrPDB 185 1e-47 2G6B-A nrPDB 185 1e-47 1Z0A-A nrPDB 182 1e-46 2IL1-A nrPDB 181 2e-46 4RKE-A nrPDB 179 8e-46 2A5J-A nrPDB 176 5e-45 6HUF-A nrPDB 174 2e-44 5FBL-B nrPDB 172 9e-44 2EW1-A nrPDB 172 9e-44 4FMC-F nrPDB 171 3e-43 3CPJ-B nrPDB 169 9e-43 5UB8-A nrPDB 169 1e-42 2F9L-A nrPDB 168 2e-42 4UJ4-A nrPDB 167 4e-42 1X3S-A nrPDB 166 8e-42 2F7S-A nrPDB 163 5e-41 3RWM-B nrPDB 161 2e-40 1Z0F-A nrPDB 160 4e-40 3BFK-A nrPDB 160 5e-40 3BC1-A nrPDB 159 8e-40 2IEZ-A nrPDB 159 1e-39 2IEY-A nrPDB 158 1e-39 2HUP-A nrPDB 156 7e-39 5XR6-A nrPDB 155 1e-38 2O52-A nrPDB 154 3e-38 2BMD-A nrPDB 154 4e-38 2P5S-A nrPDB 151 2e-37 3TSO-A nrPDB 149 1e-36 2G77-B nrPDB 144 4e-35 4G01-B nrPDB 143 4e-35 1Z06-A nrPDB 142 1e-34 1YVD-A nrPDB 142 1e-34 1YZU-A nrPDB 139 9e-34 4PHF-A nrPDB 137 3e-33 1EK0-A nrPDB 136 7e-33 2FFQ-A nrPDB 136 8e-33 2HEI-A nrPDB 135 1e-32 1TU4-A nrPDB 135 2e-32 2GIL-A nrPDB 133 6e-32 2FG5-A nrPDB 133 6e-32 4KYI-B nrPDB 133 7e-32 5YOZ-A nrPDB 131 2e-31 2OCB-A nrPDB 131 2e-31 5LEF-A nrPDB 130 5e-31 4QXA-A nrPDB 128 2e-30 1WMS-A nrPDB 127 4e-30 1D5C-A nrPDB 124 4e-29 5LDD-C nrPDB 120 3e-28 1Z22-A nrPDB 118 2e-27 6IYB-A nrPDB 113 7e-26 5CM8-B nrPDB 109 9e-25 4KLZ-A nrPDB 106 9e-24 2KE5-A nrPDB 105 2e-23 4M8N-E nrPDB 103 8e-23 4DXA-A nrPDB 102 1e-22 2J0V-A nrPDB 101 2e-22 5XC3-A nrPDB 101 3e-22 4CZ2-A nrPDB 99 9e-22 6FF8-A nrPDB 97 5e-21 2J1L-A nrPDB 96 9e-21 3CON-A nrPDB 96 2e-20 1ZC4-A nrPDB 96 2e-20 5UHV-A nrPDB 95 2e-20 3BWD-D nrPDB 94 3e-20 5WDQ-A nrPDB 94 6e-20 2NTY-C nrPDB 93 1e-19 3T5G-A nrPDB 92 1e-19 3E5H-A nrPDB 92 2e-19 3PIR-A nrPDB 92 2e-19 4DJT-A nrPDB 91 4e-19 5ZHX-e nrPDB 91 4e-19 4U5X-A nrPDB 91 4e-19 5C2K-A nrPDB 90 6e-19 4WA7-A nrPDB 90 8e-19 3CLV-A nrPDB 89 1e-18 4KU4-A nrPDB 89 2e-18 5XOJ-A nrPDB 89 2e-18 3OES-A nrPDB 88 2e-18 2ATV-A nrPDB 88 3e-18 3WYF-A nrPDB 88 3e-18 2FV8-A nrPDB 88 3e-18 2N1B-A nrPDB 87 4e-18 5CLL-A nrPDB 87 5e-18 5UWI-A nrPDB 87 5e-18 2WBL-C nrPDB 87 6e-18 5WDR-A nrPDB 87 6e-18 2ERY-A nrPDB 87 6e-18 2ATX-A nrPDB 86 9e-18 5JCP-B nrPDB 86 1e-17 2ERX-A nrPDB 84 3e-17 3TH5-A nrPDB 84 4e-17 3REG-A nrPDB 82 2e-16 1GWN-A nrPDB 82 2e-16 1M7B-A nrPDB 82 2e-16 2W2X-A nrPDB 81 4e-16 3RYT-C nrPDB 81 4e-16 5ZVP-A nrPDB 80 6e-16 3RAP-R nrPDB 79 1e-15 3VHL-B nrPDB 79 2e-15 2WKQ-A nrPDB 79 2e-15 2Q3H-A nrPDB 78 3e-15 1RYH-A nrPDB 78 3e-15 2FN4-A nrPDB 77 7e-15 4MIT-A nrPDB 75 1e-14 5C1S-A nrPDB 75 2e-14 3A58-B nrPDB 75 3e-14 2GF0-A nrPDB 70 8e-13 2REX-B nrPDB 69 1e-12 2NZJ-A nrPDB 65 2e-11 3Q72-A nrPDB 65 3e-11 2G3Y-A nrPDB 65 3e-11 3LVQ-E nrPDB 64 5e-11 2YC4-C nrPDB 64 5e-11 2A5F-A nrPDB 62 2e-10 5NZV-F nrPDB 62 2e-10 3CBQ-A nrPDB 61 4e-10 5VCU-A nrPDB 61 4e-10 2CJW-A nrPDB 60 5e-10 6BBQ-A nrPDB 59 1e-09 5UF8-A nrPDB 57 5e-09 4YLG-A nrPDB 57 6e-09 2B6H-A nrPDB 57 7e-09 3AQ4-A nrPDB 56 9e-09 1MOZ-A nrPDB 56 1e-08 4ILE-A nrPDB 56 1e-08 5HZH-A nrPDB 56 1e-08 6FAE-B nrPDB 55 2e-08 3Q85-A nrPDB 55 2e-08 3O47-A nrPDB 55 2e-08 3LRP-A nrPDB 55 2e-08 5EE5-B nrPDB 54 5e-08 3C5C-A nrPDB 54 5e-08 6DFF-C nrPDB 52 2e-07 1J2J-A nrPDB 52 2e-07 1Z6X-A nrPDB 52 2e-07 2AL7-A nrPDB 51 4e-07 1KSG-A nrPDB 50 1e-06 2H16-A nrPDB 48 2e-06 3D6T-B nrPDB 47 5e-06 1YZG-A nrPDB 47 7e-06 4ZI3-A nrPDB 46 1e-05 4WNR-A nrPDB 45 2e-05 3DPU-A nrPDB 42 1e-04 3BH6-A nrPDB 42 2e-04 6HLU-A nrPDB 42 2e-04 4V0N-A nrPDB 42 2e-04 2X77-A nrPDB 40 6e-04 2H57-A nrPDB 40 7e-04 5DE3-A nrPDB 37 0.007 4C0K-A nrPDB 36 0.010 4KV9-A nrPDB 34 0.056 2QAG-B nrPDB 34 0.057 2WL3-A nrPDB 33 0.065 6IAE-A nrPDB 33 0.10 3K53-A nrPDB 32 0.15 6CES-A nrPDB 31 0.46 4BAS-A nrPDB 30 0.52 3T1O-A nrPDB 30 0.75 6HZK-A nrPDB 29 1.3 1HEY-A nrPDB 29 1.3 4O0M-A nrPDB 29 1.4 4Z8X-A nrPDB 29 1.5 2IWR-A nrPDB 29 1.5 5ZZM-A nrPDB 28 2.4 3S1A-A nrPDB 28 2.7 1K4Y-A nrPDB 28 2.7 1MX5-A nrPDB 28 2.7 2QAG-C nrPDB 28 2.8 4ARZ-A nrPDB 28 3.2 2GAO-A nrPDB 28 3.2 2PTS-A nrPDB 28 3.7 1ZQ1-C nrPDB 28 4.2 1YE8-A nrPDB 27 4.6 2QAG-A nrPDB 27 4.7 3FTQ-A nrPDB 27 5.3 3T5D-A nrPDB 27 5.5 4ZU9-A nrPDB 27 6.2 5CYO-A nrPDB 27 8.4 >3CPH-A nrPDB Length = 213 Score = 429 bits (1103), Expect = e-121, Method: Compositional matrix adjust. Identities = 213/213 (100%), Positives = 213/213 (100%) Query: 1 MSGLRTVSASSGNGKSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIK 60 MSGLRTVSASSGNGKSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIK Sbjct: 1 MSGLRTVSASSGNGKSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIK 60 Query: 61 TVDINGKKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNE 120 TVDINGKKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNE Sbjct: 61 TVDINGKKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNE 120 Query: 121 HANDEAQLLLVGNKSDMETRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLI 180 HANDEAQLLLVGNKSDMETRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLI Sbjct: 121 HANDEAQLLLVGNKSDMETRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLI 180 Query: 181 QEKIDSNKLVGVGNGKEGNISINSGSGNSSKSN 213 QEKIDSNKLVGVGNGKEGNISINSGSGNSSKSN Sbjct: 181 QEKIDSNKLVGVGNGKEGNISINSGSGNSSKSN 213 >2OCY-C nrPDB Length = 170 Score = 347 bits (891), Expect = 2e-96, Method: Compositional matrix adjust. Identities = 170/170 (100%), Positives = 170/170 (100%) Query: 18 DSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTA 77 DSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTA Sbjct: 1 DSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTA 60 Query: 78 GQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSDM 137 GQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSDM Sbjct: 61 GQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSDM 120 Query: 138 ETRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEKIDSN 187 ETRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEKIDSN Sbjct: 121 ETRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEKIDSN 170 >6O62-A nrPDB Length = 184 Score = 261 bits (666), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 117/178 (65%), Positives = 153/178 (85%), Gaps = 1/178 (0%) Query: 7 VSASSGNGKSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDING 66 +S + ++YD IMK+LL+GDSGVGKSCLL+RFVEDKFNPSFITTIGIDFKI+T++ G Sbjct: 1 MSGKGTSSRAYDMIMKLLLVGDSGVGKSCLLLRFVEDKFNPSFITTIGIDFKIRTIESKG 60 Query: 67 KKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEA 126 K++KLQ+WDTAGQERFRTITTAYYRGAMGI+L+YDVTD R+F N++ WF+TV +HAN++A Sbjct: 61 KRIKLQVWDTAGQERFRTITTAYYRGAMGIVLIYDVTDSRSFENVENWFQTVTQHANEDA 120 Query: 127 QLLLVGNKSDMET-RVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEK 183 Q+ LVGNK D E R V+ +QG+ LA +L +PF+E+SAK+++NV+ IF+ LA +IQEK Sbjct: 121 QIFLVGNKCDDEVNRQVSKEQGQELAAKLNVPFLEASAKSNENVDSIFYELASIIQEK 178 >5SZJ-A nrPDB Length = 202 Score = 225 bits (574), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 111/203 (54%), Positives = 150/203 (73%), Gaps = 8/203 (3%) Query: 15 KSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLW 74 K+YD + K+LLIGDSGVGK+C+L RF +D FN +FI+TIGIDFKIKTV++ GKK+KLQ+W Sbjct: 6 KTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIW 65 Query: 75 DTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNK 134 DTAGQERF TITT+YYRGAMGI+LVYD+T+ ++F NI +W + ++EHAN++ + +L+GNK Sbjct: 66 DTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNK 125 Query: 135 SDM-ETRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEKIDSNKLVGVG 193 DM + RVV +GE +A+E GI F E+SAK + N+ + F TLA+ I K V Sbjct: 126 CDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRK------TPVK 179 Query: 194 NGKEGNISINSGSGNSS-KSNCC 215 N+ I+SG G + KS CC Sbjct: 180 EPNSENVDISSGGGVTGWKSKCC 202 >5SZI-A nrPDB Length = 209 Score = 223 bits (569), Expect = 4e-59, Method: Compositional matrix adjust. Identities = 101/173 (58%), Positives = 142/173 (82%), Gaps = 1/173 (0%) Query: 14 GKSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQL 73 K+YD + K+LLIGDSGVGK+C+L RF ED FN +FI+TIGIDFKI+T++++GK++KLQ+ Sbjct: 4 AKTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQI 63 Query: 74 WDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGN 133 WDTAGQERFRTITTAYYRGAMGI+LVYD+T+E++F NI+ W + + EHA+ + + +++GN Sbjct: 64 WDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGN 123 Query: 134 KSDM-ETRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEKID 185 K D+ + R V+ ++GE LA + GI F+E+SAK + NV FFTLA+ I+ K+D Sbjct: 124 KCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMD 176 >4LHX-A nrPDB Length = 186 Score = 223 bits (568), Expect = 4e-59, Method: Compositional matrix adjust. Identities = 101/173 (58%), Positives = 142/173 (82%), Gaps = 1/173 (0%) Query: 14 GKSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQL 73 K+YD + K+LLIGDSGVGK+C+L RF ED FN +FI+TIGIDFKI+T++++GK++KLQ+ Sbjct: 4 AKTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQI 63 Query: 74 WDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGN 133 WDTAGQERFRTITTAYYRGAMGI+LVYD+T+E++F NI+ W + + EHA+ + + +++GN Sbjct: 64 WDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGN 123 Query: 134 KSDM-ETRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEKID 185 K D+ + R V+ ++GE LA + GI F+E+SAK + NV FFTLA+ I+ K+D Sbjct: 124 KCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMD 176 >5SZH-B nrPDB Length = 203 Score = 220 bits (561), Expect = 3e-58, Method: Compositional matrix adjust. Identities = 102/200 (51%), Positives = 145/200 (72%), Gaps = 4/200 (2%) Query: 17 YDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDT 76 YD + K+LLIGDSGVGKSCLL+RF +D + S+I+TIG+DFKI+T++++GK +KLQ+WDT Sbjct: 7 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 66 Query: 77 AGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSD 136 AGQERFRTIT++YYRGA GII+VYDVTD+ ++ N+KQW + ++ +A++ LLVGNKSD Sbjct: 67 AGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSD 126 Query: 137 MET-RVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEKIDSNKLVGVGNG 195 + T +VV + A LGIPF+E+SAKN NV + F T+A I++++ G G Sbjct: 127 LTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASG---G 183 Query: 196 KEGNISINSGSGNSSKSNCC 215 + N+ I+S + CC Sbjct: 184 ERPNLKIDSTPVKPAGGGCC 203 >5LPN-A nrPDB Length = 177 Score = 218 bits (554), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 101/170 (59%), Positives = 137/170 (80%), Gaps = 1/170 (0%) Query: 15 KSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLW 74 K+YD + K+LLIGDSGVGK+C+L RF +D FN +FI+TIGIDFKIKTV++ GKK+KLQ+W Sbjct: 6 KTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIW 65 Query: 75 DTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNK 134 DTAGQERF TITT+YYRGAMGI+LVYD+T+ ++F NI +W + ++EHAN++ + +L+GNK Sbjct: 66 DTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNK 125 Query: 135 SDM-ETRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEK 183 DM + RVV +GE +A+E GI F E+SAK + N+ + F TLA+ I K Sbjct: 126 CDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRK 175 >3L0I-B nrPDB Length = 199 Score = 211 bits (536), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 96/175 (54%), Positives = 134/175 (76%), Gaps = 1/175 (0%) Query: 11 SGNGKSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVK 70 S YD + K+LLIGDSGVGKSCLL+RF +D + S+I+TIG+DFKI+T++++GK +K Sbjct: 24 SSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIK 83 Query: 71 LQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLL 130 LQ+WDTAGQERFRTIT++YYRGA GII+VYDVTD+ +F N+KQW + ++ +A++ LL Sbjct: 84 LQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLL 143 Query: 131 VGNKSDMET-RVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEKI 184 VGNK D+ T +VV + A LGIPF+E+SAKN NV + F T+A I++++ Sbjct: 144 VGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRM 198 >2RHD-A nrPDB Length = 175 Score = 209 bits (533), Expect = 5e-55, Method: Compositional matrix adjust. Identities = 99/174 (56%), Positives = 131/174 (75%), Gaps = 1/174 (0%) Query: 12 GNGKSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKL 71 G YD + K+LLIGDSGVGKSCLL+RF +D + S+I+TIG+DFKI+T+ + K VKL Sbjct: 1 GMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTISLENKTVKL 60 Query: 72 QLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLV 131 Q+WDTAGQERFRTIT++YYRGA GII+VYDVTD +F N+KQW + ++ +A + LLV Sbjct: 61 QIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDRDSFDNVKQWIQEIDRYAMENVNKLLV 120 Query: 132 GNKSDM-ETRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEKI 184 GNK D+ RVVT+D+G LA GI FIE+SAKN NV + F T+A I++++ Sbjct: 121 GNKCDLVSKRVVTSDEGRELADSHGIKFIETSAKNAYNVEQAFHTMAGEIKKRV 174 >2WWX-A nrPDB Length = 175 Score = 207 bits (526), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 94/169 (55%), Positives = 132/169 (78%), Gaps = 1/169 (0%) Query: 17 YDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDT 76 YD + K+LLIGDSGVGKSCLL+RF +D + S+I+TIG+DFKI+T++++GK +KLQ+WDT Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 64 Query: 77 AGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSD 136 AGQERFRTIT++YYRGA GII+VYDVTD+ +F N+KQW + ++ +A++ LLVG K D Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGIKCD 124 Query: 137 MET-RVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEKI 184 + T +VV + A LGIPF+E+SAKN NV + F T+A I++++ Sbjct: 125 LTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRM 173 >3CUE-F nrPDB Length = 206 Score = 202 bits (514), Expect = 8e-53, Method: Compositional matrix adjust. Identities = 98/202 (48%), Positives = 139/202 (68%), Gaps = 3/202 (1%) Query: 17 YDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDT 76 YD + K+LLIG+SGVGKSCLL+RF +D + +I+TIG+DFKIKTV+++GK VKLQ+WDT Sbjct: 5 YDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWDT 64 Query: 77 AGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSD 136 AGQERFRTIT++YYRG+ GII+VYDVTD+ +F +K W + ++ +A LLVGNK D Sbjct: 65 AGQERFRTITSSYYRGSHGIIIVYDVTDQESFNGVKMWLQEIDRYATSTVLKLLVGNKCD 124 Query: 137 M-ETRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEKIDSNKLVGVGNG 195 + + RVV D + A +PF+E+SA + NV + F T+A+ I+E + L Sbjct: 125 LKDKRVVEYDVAKEFADANKMPFLETSALDSTNVEDAFLTMARQIKESMSQQNLNETTQK 184 Query: 196 KE--GNISINSGSGNSSKSNCC 215 KE GN+++ S ++ CC Sbjct: 185 KEDKGNVNLKGQSLTNTGGGCC 206 >1YZN-A nrPDB Length = 185 Score = 196 bits (497), Expect = 9e-51, Method: Compositional matrix adjust. Identities = 91/170 (53%), Positives = 126/170 (74%), Gaps = 1/170 (0%) Query: 14 GKSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQL 73 G YD + K+LLIG+SGVGKSCLL+RF +D + +I+TIG+DFKIKTV+++GK VKLQ+ Sbjct: 15 GSEYDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQI 74 Query: 74 WDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGN 133 WDTAGQERFRTIT++YYRG+ GII+VYDVTD+ +F +K W + ++ +A LLVGN Sbjct: 75 WDTAGQERFRTITSSYYRGSHGIIIVYDVTDQESFNGVKMWLQEIDRYATSTVLKLLVGN 134 Query: 134 KSDM-ETRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQE 182 K D+ + RVV D + A +PF+E+SA + NV + F T+A+ I+E Sbjct: 135 KCDLKDKRVVEYDVAKEFADANKMPFLETSALDSTNVEDAFLTMARQIKE 184 >3RAB-A nrPDB Length = 169 Score = 195 bits (495), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 90/169 (53%), Positives = 127/169 (75%), Gaps = 1/169 (0%) Query: 16 SYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWD 75 ++D + KIL+IG+S VGK+ L R+ +D F P+F++T+GIDFK+KT+ N K++KLQ+WD Sbjct: 1 NFDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWD 60 Query: 76 TAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNKS 135 TAGQER+RTITTAYYRGAMG IL+YD+T+E +F ++ W + ++ D AQ+LLVGNK Sbjct: 61 TAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVLLVGNKC 120 Query: 136 DME-TRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEK 183 DME RVV++++G LA LG F E+SAK++ NV + F L +I EK Sbjct: 121 DMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLVDVICEK 169 >1ZBD-A nrPDB Length = 203 Score = 192 bits (489), Expect = 7e-50, Method: Compositional matrix adjust. Identities = 89/169 (52%), Positives = 126/169 (74%), Gaps = 1/169 (0%) Query: 17 YDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDT 76 +D + KIL+IG+S VGK+ L R+ +D F P+F++T+GIDFK+KT+ N K++KLQ+WDT Sbjct: 5 FDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDT 64 Query: 77 AGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSD 136 AG ER+RTITTAYYRGAMG IL+YD+T+E +F ++ W + ++ D AQ+LLVGNK D Sbjct: 65 AGLERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVLLVGNKCD 124 Query: 137 ME-TRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEKI 184 ME RVV++++G LA LG F E+SAK++ NV + F L +I EK+ Sbjct: 125 MEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLVDVICEKM 173 >3DZ8-A nrPDB Length = 191 Score = 189 bits (479), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 87/169 (51%), Positives = 126/169 (74%), Gaps = 1/169 (0%) Query: 17 YDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDT 76 +D + K+L+IG+S VGK+ L R+ +D F P+F++T+GIDFK+KTV + K+VKLQ+WDT Sbjct: 20 FDYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTVYRHEKRVKLQIWDT 79 Query: 77 AGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSD 136 AGQER+RTITTAYYRGAMG IL+YD+T+E +F ++ W + ++ D AQ++LVGNK D Sbjct: 80 AGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQIKTYSWDNAQVILVGNKCD 139 Query: 137 M-ETRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEKI 184 M E RVV ++G+ LA++LG F E+SAK + +V + F L I +K+ Sbjct: 140 MEEERVVPTEKGQLLAEQLGFDFFEASAKENISVRQAFERLVDAICDKM 188 >2GF9-A nrPDB Length = 189 Score = 188 bits (478), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 86/169 (50%), Positives = 125/169 (73%), Gaps = 1/169 (0%) Query: 18 DSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTA 77 D + K+LLIG+S VGK+ L R+ +D F P+F++T+GIDFK+KTV + K++KLQ+WDTA Sbjct: 20 DYMFKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTVYRHDKRIKLQIWDTA 79 Query: 78 GQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSDM 137 GQER+RTITTAYYRGAMG +L+YD+ ++ +F ++ W + ++ D AQ++LVGNK D+ Sbjct: 80 GQERYRTITTAYYRGAMGFLLMYDIANQESFAAVQDWATQIKTYSWDNAQVILVGNKCDL 139 Query: 138 E-TRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEKID 185 E RVV A+ G LA +LG F E+SAK + NV ++F L +I EK++ Sbjct: 140 EDERVVPAEDGRRLADDLGFEFFEASAKENINVKQVFERLVDVICEKMN 188 >4RKF-A nrPDB Length = 190 Score = 186 bits (473), Expect = 5e-48, Method: Compositional matrix adjust. Identities = 86/171 (50%), Positives = 128/171 (74%), Gaps = 1/171 (0%) Query: 15 KSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLW 74 +++D + K+L+IG+S VGK+ L R+ +D F +F++T+GIDFK+KTV + K+VKLQ+W Sbjct: 18 QNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRVKLQIW 77 Query: 75 DTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNK 134 DTAG ER+RTITTAYYRGAMG IL+YDVT+E +F +++ W + ++ D AQ++LVGNK Sbjct: 78 DTAGLERYRTITTAYYRGAMGFILMYDVTNEDSFNSVQDWVTQIKTYSWDNAQVILVGNK 137 Query: 135 SDME-TRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEKI 184 DME RV++ ++G LA +LG+ F E+SAK + NV +F L +I +K+ Sbjct: 138 CDMEDQRVISFERGRQLADQLGVEFFETSAKENVNVKAVFERLVDIICDKM 188 >6IF2-B nrPDB Length = 186 Score = 185 bits (470), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 88/168 (52%), Positives = 125/168 (74%), Gaps = 2/168 (1%) Query: 14 GKSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQL 73 + YD + K+L+IGDSGVGKS LL+RF ++ F+ S+ITTIG+DFKI+TV+ING+KVKLQ+ Sbjct: 8 ARDYDHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQI 67 Query: 74 WDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGN 133 WDTAG ERFRTIT+ YYRG G+I+VYDVT +F N+K+W +N++ +D + +LVGN Sbjct: 68 WDTAGLERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNCDDVCR-ILVGN 126 Query: 134 KS-DMETRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLI 180 K+ D E +VV + A ++GI E+SAK + NV E+F + +L+ Sbjct: 127 KNDDPERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMFNCITELV 174 >2G6B-A nrPDB Length = 180 Score = 185 bits (469), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 87/169 (51%), Positives = 124/169 (73%), Gaps = 2/169 (1%) Query: 17 YDSIMKILLIGDSGVGKSCLLVRFVEDKFNP-SFITTIGIDFKIKTVDINGKKVKLQLWD 75 YD K++L+GDSGVGK+CLLVRF + F +FI+T+GIDF+ K +D++G KVKLQ+WD Sbjct: 7 YDVAFKVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVLDVDGVKVKLQMWD 66 Query: 76 TAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNKS 135 TAGQERFR++T AYYR A ++L+YDVT++ +F NI+ W ++E+A + L+L+GNK Sbjct: 67 TAGQERFRSVTHAYYRDAHALLLLYDVTNKASFDNIQAWLTEIHEYAQHDVALMLLGNKV 126 Query: 136 D-METRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEK 183 D RVV + GE LAKE G+PF+E+SAK NV+ F +AK ++ + Sbjct: 127 DSAHERVVKREDGEKLAKEYGLPFMETSAKTGLNVDLAFTAIAKELKRR 175 >1Z0A-A nrPDB Length = 174 Score = 182 bits (461), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 83/171 (48%), Positives = 120/171 (70%), Gaps = 1/171 (0%) Query: 14 GKSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQL 73 G +Y + K ++IGD+GVGKSCLL++F + +F P TIG++F + + I+GK++KLQ+ Sbjct: 4 GSAYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQI 63 Query: 74 WDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGN 133 WDTAGQE FR+IT +YYRGA G +LVYD+T TF ++ W + +H+N ++L+GN Sbjct: 64 WDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGN 123 Query: 134 KSDMETRV-VTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEK 183 KSD+E+R V ++GEA A+E G+ F+E+SAK NV E F AK I EK Sbjct: 124 KSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEK 174 >2IL1-A nrPDB Length = 192 Score = 181 bits (460), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 87/177 (49%), Positives = 132/177 (74%), Gaps = 2/177 (1%) Query: 10 SSGNGKSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKV 69 G+ + D +++++IG GVGK+ L+ RF +D F + +T+G+DFKIKTV++ GKK+ Sbjct: 16 PRGSPRPADFKLQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRGKKI 75 Query: 70 KLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLL 129 +LQ+WDTAGQERF +IT+AYYR A GIILVYD+T + TF ++ +W K ++++A+++A+LL Sbjct: 76 RLQIWDTAGQERFNSITSAYYRSAKGIILVYDITKKETFDDLPKWMKMIDKYASEDAELL 135 Query: 130 LVGNKSDMET-RVVTADQGEALAKEL-GIPFIESSAKNDDNVNEIFFTLAKLIQEKI 184 LVGNK D ET R +T QGE A+++ G+ F E+SAK++ NV+EIF L I +K+ Sbjct: 136 LVGNKLDCETDREITRQQGEKFAQQITGMRFCEASAKDNFNVDEIFLKLVDDILKKM 192 >4RKE-A nrPDB Length = 176 Score = 179 bits (454), Expect = 8e-46, Method: Compositional matrix adjust. Identities = 82/172 (47%), Positives = 120/172 (69%), Gaps = 1/172 (0%) Query: 14 GKSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQL 73 G SY + K ++IGD+GVGKSCLL++F + +F P TIG++F + + I+GK++KLQ+ Sbjct: 4 GMSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQI 63 Query: 74 WDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGN 133 WDTAG E FR+IT +YYRGA G +LVYD+T TF ++ W + +H+N ++L+GN Sbjct: 64 WDTAGLEAFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIMLIGN 123 Query: 134 KSDMETRV-VTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEKI 184 KSD+++R V ++GEA A+E G+ F+E+SA+ NV E F AK I EKI Sbjct: 124 KSDLDSRREVKKEEGEAFAREHGLVFMETSARTAANVEEAFINTAKEIYEKI 175 >2A5J-A nrPDB Length = 191 Score = 176 bits (447), Expect = 5e-45, Method: Compositional matrix adjust. Identities = 81/166 (48%), Positives = 118/166 (71%), Gaps = 1/166 (0%) Query: 20 IMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQ 79 + K ++IGD+GVGKSCLL++F + +F P TIG++F + V+I+GK++KLQ+WDTAGQ Sbjct: 21 LFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWDTAGQ 80 Query: 80 ERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSDMET 139 E FR+IT +YYRGA G +LVYD+T TF ++ W + +H++ ++L+GNKSD+E+ Sbjct: 81 ESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNKSDLES 140 Query: 140 RV-VTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEKI 184 R V ++GEA A+E G+ F+E+SAK NV E F AK I KI Sbjct: 141 RRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEIYRKI 186 >6HUF-A nrPDB Length = 182 Score = 174 bits (442), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 82/176 (46%), Positives = 123/176 (69%), Gaps = 2/176 (1%) Query: 12 GNGKSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKL 71 G+ YD ++K L +GDSGVGK+ +L ++ + KFN FITT+GIDF+ KT+ N K++KL Sbjct: 1 GSDGDYDYLIKFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKTIYRNDKRIKL 60 Query: 72 QLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDE-AQLLL 130 QLWDTAG ERFR++TTA++R AMG +L++D+T+E +F N++ W + HA E ++L Sbjct: 61 QLWDTAGLERFRSLTTAFFRDAMGFLLLFDLTNEESFLNVRNWISQLKTHAYSENPDIVL 120 Query: 131 VGNKSDME-TRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEKID 185 GNKSD+E RVV A + LA+ GIP+ E+SA N N+++ L LI ++++ Sbjct: 121 CGNKSDLEDERVVAAAEARQLAEHYGIPYFETSAANGTNISQAIEMLLDLIMKRME 176 >5FBL-B nrPDB Length = 221 Score = 172 bits (436), Expect = 9e-44, Method: Compositional matrix adjust. Identities = 84/209 (40%), Positives = 130/209 (62%), Gaps = 13/209 (6%) Query: 17 YDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDT 76 YD + K++LIGDSGVGKS LL RF ++FN +TIG++F +++ ++GK +K Q+WDT Sbjct: 13 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 72 Query: 77 AGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSD 136 AGQER+R IT+AYYRGA+G +LVYD+ T+ N+++W K + +HA+ ++LVGNKSD Sbjct: 73 AGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSD 132 Query: 137 M-ETRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEKIDSNKLVGVGNG 195 + R V D+ A A++ G+ FIE+SA + NV F T+ I + ++ + Sbjct: 133 LRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQM---SDR 189 Query: 196 KEGNIS---------INSGSGNSSKSNCC 215 +E ++S + + N K CC Sbjct: 190 RENDMSPSNNVVPIHVPPTTENKPKVQCC 218 >2EW1-A nrPDB Length = 201 Score = 172 bits (436), Expect = 9e-44, Method: Compositional matrix adjust. Identities = 83/180 (46%), Positives = 124/180 (68%), Gaps = 1/180 (0%) Query: 12 GNGKSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKL 71 G+ + YD + KI+LIG++GVGK+CL+ RF + F P TIG+DF IKTV+ING+KVKL Sbjct: 18 GSMEDYDFLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKL 77 Query: 72 QLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLV 131 Q+WDTAGQERFR+IT +YYR A +IL YD+T E +F + +W + + ++A+++ +LV Sbjct: 78 QIWDTAGQERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLV 137 Query: 132 GNKSDM-ETRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEKIDSNKLV 190 GNK D+ E R V+ + E ++ + ++E+SAK DNV ++F LA + + N LV Sbjct: 138 GNKIDLAERREVSQQRAEEFSEAQDMYYLETSAKESDNVEKLFLDLACRLISEARQNTLV 197 >4FMC-F nrPDB Length = 117 Score = 171 bits (432), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 73/117 (62%), Positives = 100/117 (85%) Query: 23 ILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQERF 82 +LLIGDSGVGKSCLL+RF +D + S+I+TIG+DFKI+T++++GK +KLQ+WDTAGQERF Sbjct: 1 LLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERF 60 Query: 83 RTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSDMET 139 RTIT++YYRGA GII+VYDVTD+ +F N+KQW + ++ +A++ LLVGNK D+ T Sbjct: 61 RTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTT 117 >3CPJ-B nrPDB Length = 223 Score = 169 bits (428), Expect = 9e-43, Method: Compositional matrix adjust. Identities = 78/177 (44%), Positives = 121/177 (68%), Gaps = 1/177 (0%) Query: 14 GKSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQL 73 G YD + KI+LIGDSGVGKS LL RF +++FN +TIG++F +T++I GK++K Q+ Sbjct: 7 GYDYDLLFKIVLIGDSGVGKSNLLSRFTKNEFNMDSKSTIGVEFATRTLEIEGKRIKAQI 66 Query: 74 WDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGN 133 WDTAGQER+R IT+AYYRGA+G ++VYD++ ++ N W + E+A+D + L+GN Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLSELRENADDNVAVGLIGN 126 Query: 134 KSDM-ETRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEKIDSNKL 189 KSD+ R V ++ + A+E + F E+SA N +NV++ F L I +K+ +++ Sbjct: 127 KSDLAHLRAVPTEESKTFAQENQLLFTETSALNSENVDKAFEELINTIYQKVSKHQM 183 >5UB8-A nrPDB Length = 222 Score = 169 bits (427), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 82/174 (47%), Positives = 120/174 (68%), Gaps = 1/174 (0%) Query: 17 YDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDT 76 Y+ + KI+LIGDSGVGKS LL RF D+FN +TIG++F +T++I+GK+VK Q+WDT Sbjct: 12 YEYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGKRVKAQIWDT 71 Query: 77 AGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSD 136 AGQER+R IT+AYYRGA+G ++VYD+ ++ ++ +W K + EHA+ + LVGNKSD Sbjct: 72 AGQERYRAITSAYYRGAVGALIVYDIAKTESYESVSRWLKELKEHADANIIIELVGNKSD 131 Query: 137 MET-RVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEKIDSNKL 189 ++ R V ++ + A E + F E+SA + DNV+ F L K I E I ++L Sbjct: 132 LDHLRAVPTEEAKNFAMENNLLFTEASALSSDNVDLSFHQLLKNIYEMISKHQL 185 >2F9L-A nrPDB Length = 199 Score = 168 bits (426), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 76/158 (48%), Positives = 112/158 (70%), Gaps = 1/158 (0%) Query: 17 YDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDT 76 YD + K++LIGDSGVGKS LL RF ++FN +TIG++F +++ ++GK +K Q+WDT Sbjct: 2 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 61 Query: 77 AGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSD 136 AGQER+R IT+AYYRGA+G +LVYD+ T+ N+++W K + +HA+ ++LVGNKSD Sbjct: 62 AGQERYRRITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSD 121 Query: 137 M-ETRVVTADQGEALAKELGIPFIESSAKNDDNVNEIF 173 + R V D+ A A++ + FIE+SA + NV E F Sbjct: 122 LRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAF 159 >4UJ4-A nrPDB Length = 185 Score = 167 bits (422), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 76/161 (47%), Positives = 113/161 (70%), Gaps = 1/161 (0%) Query: 17 YDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDT 76 YD + K++LIGDSGVGKS LL RF ++FN +TIG++F +++ ++GK +K Q+WDT Sbjct: 7 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 66 Query: 77 AGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSD 136 AG ER+R IT+AYYRGA+G +LVYD+ T+ N+++W K + +HA+ ++LVGNKSD Sbjct: 67 AGLERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSD 126 Query: 137 M-ETRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTL 176 + R V D+ A A++ G+ FIE+SA + NV F T+ Sbjct: 127 LRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTI 167 >1X3S-A nrPDB Length = 195 Score = 166 bits (419), Expect = 8e-42, Method: Compositional matrix adjust. Identities = 88/177 (49%), Positives = 116/177 (65%), Gaps = 4/177 (2%) Query: 8 SASSGNGKSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGK 67 S SSG + + +KIL+IG+SGVGKS LL+RF +D F+P TIG+DFK+KT+ ++G Sbjct: 3 SGSSGMDEDVLTTLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGN 62 Query: 68 KVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHA--NDE 125 K KL +WDTAGQERFRT+T +YYRGA G+ILVYDVT TF + W + + ND Sbjct: 63 KAKLAIWDTAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRNDI 122 Query: 126 AQLLLVGNKSDMETRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLA-KLIQ 181 +LVGNK D E R V ++G A++ + FIE+SAK D V F L K+IQ Sbjct: 123 VN-MLVGNKIDKENREVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQ 178 >2F7S-A nrPDB Length = 217 Score = 163 bits (413), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 80/182 (43%), Positives = 120/182 (65%), Gaps = 12/182 (6%) Query: 17 YDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGK--------- 67 YD ++K+L +GDSGVGK+ L R+ ++KFNP FITT+GIDF+ K V N + Sbjct: 22 YDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKA 81 Query: 68 -KVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDE- 125 KV LQLWDTAGQERFR++TTA++R AMG +L++D+T +++F N++ W + +A E Sbjct: 82 FKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCEN 141 Query: 126 AQLLLVGNKSDM-ETRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEKI 184 ++L+GNK+D+ + R V Q LA + GIP+ E+SA NV + TL LI +++ Sbjct: 142 PDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIMKRM 201 Query: 185 DS 186 + Sbjct: 202 EQ 203 >3RWM-B nrPDB Length = 185 Score = 161 bits (408), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 78/177 (44%), Positives = 116/177 (65%), Gaps = 1/177 (0%) Query: 14 GKSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQL 73 G YD + KI+LIGDSGVGKS LL RF D+FN +TIG++F +T+++ KK+K Q+ Sbjct: 4 GYDYDYLFKIVLIGDSGVGKSNLLSRFTTDEFNIESKSTIGVEFATRTIEVENKKIKAQI 63 Query: 74 WDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGN 133 WDTAG ER+R IT+AYYRGA+G ++VYD++ ++ N W + E+A+D + L+GN Sbjct: 64 WDTAGLERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLTELRENADDNVAVGLIGN 123 Query: 134 KSDM-ETRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEKIDSNKL 189 KSD+ R V D+ + A E + F E+SA N DNV++ F L I + + +++ Sbjct: 124 KSDLAHLRAVPTDEAKNFAMENQMLFTETSALNSDNVDKAFRELIVAIFQMVSKHQV 180 >1Z0F-A nrPDB Length = 179 Score = 160 bits (405), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 74/167 (44%), Positives = 110/167 (65%), Gaps = 1/167 (0%) Query: 17 YDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDT 76 Y I K ++IGD GVGKSCLL +F E KF TIG++F + ++++G+K+KLQ+WDT Sbjct: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDT 71 Query: 77 AGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSD 136 AGQERFR +T +YYRGA G ++VYD+T T+ ++ W N ++L+GNK+D Sbjct: 72 AGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKAD 131 Query: 137 MET-RVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQE 182 +E R VT ++ + A+E G+ F+E+SAK +NV + F AK I + Sbjct: 132 LEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIYQ 178 >3BFK-A nrPDB Length = 181 Score = 160 bits (404), Expect = 5e-40, Method: Compositional matrix adjust. Identities = 81/165 (49%), Positives = 113/165 (68%), Gaps = 2/165 (1%) Query: 14 GKSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDI-NGKKVKLQ 72 G YD + KI+LIGDSGVGKS LL RF D+FN +TIG++F K++ + N K +K Q Sbjct: 1 GDYYDYLFKIVLIGDSGVGKSNLLSRFTRDEFNLESKSTIGVEFATKSIQLKNNKIIKAQ 60 Query: 73 LWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVG 132 +WDTAGQER+R IT+AYYRGA+G +LVYD+T + +F NI++W K + ++A+ +LLVG Sbjct: 61 IWDTAGQERYRAITSAYYRGAVGALLVYDITKKNSFENIEKWLKELRDNADSNIVILLVG 120 Query: 133 NKSDMET-RVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTL 176 NKSD++ RV+ + AK+ + FIE+SA NV F L Sbjct: 121 NKSDLKHLRVINDNDATQYAKKEKLAFIETSALEATNVELAFHQL 165 >3BC1-A nrPDB Length = 195 Score = 159 bits (402), Expect = 8e-40, Method: Compositional matrix adjust. Identities = 77/181 (42%), Positives = 119/181 (65%), Gaps = 12/181 (6%) Query: 17 YDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDIN----------G 66 YD ++K L +GDSGVGK+ +L ++ + KFN FITT+GIDF+ K V G Sbjct: 8 YDYLIKFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKRVVYRANGPDGAVGRG 67 Query: 67 KKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDE- 125 +++ LQLWDTAG ERFR++TTA++R AMG +L++D+T+E++F N++ W + HA E Sbjct: 68 QRIHLQLWDTAGLERFRSLTTAFFRDAMGFLLLFDLTNEQSFLNVRNWISQLQMHAYSEN 127 Query: 126 AQLLLVGNKSDME-TRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEKI 184 ++L GNKSD+E R V ++ LA++ GIP+ E+SA N N++ L LI +++ Sbjct: 128 PDIVLCGNKSDLEDQRAVKEEEARELAEKYGIPYFETSAANGTNISHAIEMLLDLIMKRM 187 Query: 185 D 185 + Sbjct: 188 E 188 >2IEZ-A nrPDB Length = 220 Score = 159 bits (401), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 80/181 (44%), Positives = 120/181 (66%), Gaps = 12/181 (6%) Query: 17 YDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTV--DINGK------- 67 YD ++K+L +GDSGVGK+ L R+ ++KFNP FITT+GIDF+ K V D G Sbjct: 8 YDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYDTQGADGASGKA 67 Query: 68 -KVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDE- 125 KV LQLWDTAG ERFR++TTA++R AMG +L++D+T +++F N++ W + +A E Sbjct: 68 FKVHLQLWDTAGLERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCEN 127 Query: 126 AQLLLVGNKSDM-ETRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEKI 184 ++L+GNK+D+ + R V Q LA++ GIP+ E+SA NV + TL LI +++ Sbjct: 128 PDIVLIGNKADLPDQREVNERQARELAEKYGIPYFETSAATGQNVEKSVETLLDLIMKRM 187 Query: 185 D 185 + Sbjct: 188 E 188 >2IEY-A nrPDB Length = 195 Score = 158 bits (400), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 80/181 (44%), Positives = 120/181 (66%), Gaps = 12/181 (6%) Query: 17 YDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTV--DINGK------- 67 YD ++K+L +GDSGVGK+ L R+ ++KFNP FITT+GIDF+ K V D G Sbjct: 8 YDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYDTQGADGASGKA 67 Query: 68 -KVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDE- 125 KV LQLWDTAG ERFR++TTA++R AMG +L++D+T +++F N++ W + +A E Sbjct: 68 FKVHLQLWDTAGLERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCEN 127 Query: 126 AQLLLVGNKSDM-ETRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEKI 184 ++L+GNK+D+ + R V Q LA++ GIP+ E+SA NV + TL LI +++ Sbjct: 128 PDIVLIGNKADLPDQREVNERQARELAEKYGIPYFETSAATGQNVEKSVETLLDLIMKRM 187 Query: 185 D 185 + Sbjct: 188 E 188 >2HUP-A nrPDB Length = 201 Score = 156 bits (394), Expect = 7e-39, Method: Compositional matrix adjust. Identities = 77/165 (46%), Positives = 112/165 (67%), Gaps = 2/165 (1%) Query: 15 KSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLW 74 + YD + K++L+GD+ VGK+C++ RF F+ +TIG+DF +KT++I GK+VKLQ+W Sbjct: 24 EQYDFLFKLVLVGDASVGKTCVVQRFKTGAFSERQGSTIGVDFTMKTLEIQGKRVKLQIW 83 Query: 75 DTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNK 134 DTAGQERFRTIT +YYR A G IL YD+T +F ++ W + V ++A LL+GNK Sbjct: 84 DTAGQERFRTITQSYYRSANGAILAYDITKRSSFLSVPHWIEDVRKYAGSNIVQLLIGNK 143 Query: 135 SDM-ETRVVTADQGEALAKELGI-PFIESSAKNDDNVNEIFFTLA 177 SD+ E R V+ + ++LA+ I IE+SAK+ NV E F +A Sbjct: 144 SDLSELREVSLAEAQSLAEHYDILCAIETSAKDSSNVEEAFLRVA 188 >5XR6-A nrPDB Length = 194 Score = 155 bits (392), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 74/158 (46%), Positives = 106/158 (67%), Gaps = 1/158 (0%) Query: 17 YDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDT 76 YD + K++LIGDSGVGKS LL RF +++FN +TIG++F KT + GK VK Q+WDT Sbjct: 22 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTTKVEGKVVKAQIWDT 81 Query: 77 AGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSD 136 AGQER+R IT+AYYRGA+G +L+YDVT TF N +W + + H + ++L+GNK D Sbjct: 82 AGQERYRAITSAYYRGAVGALLIYDVTRHATFENAARWLRELRGHTDPNIVVMLIGNKCD 141 Query: 137 METRV-VTADQGEALAKELGIPFIESSAKNDDNVNEIF 173 + V V ++ +A A+ + F+E+SA + NV F Sbjct: 142 LRHLVAVKTEEAKAFAERESLYFMETSALDATNVENAF 179 >2O52-A nrPDB Length = 200 Score = 154 bits (389), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 77/173 (44%), Positives = 110/173 (63%), Gaps = 1/173 (0%) Query: 18 DSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTA 77 D + K L+IG +G GKSCLL +F+E+KF TIG++F + V++ GK VKLQ+WDTA Sbjct: 23 DFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWDTA 82 Query: 78 GQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSDM 137 GQERFR++T +YYRGA G +LVYD+T T+ ++ W A+ ++L GNK D+ Sbjct: 83 GQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVILCGNKKDL 142 Query: 138 ET-RVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEKIDSNKL 189 + R VT + A+E + F+E+SA +NV E F A+ I KIDS +L Sbjct: 143 DPEREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTILNKIDSGEL 195 >2BMD-A nrPDB Length = 186 Score = 154 bits (388), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 77/176 (43%), Positives = 112/176 (63%), Gaps = 1/176 (0%) Query: 15 KSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLW 74 ++YD + K L+IG++G GKSCLL +F+E KF TIG++F K +++ GK VKLQ+W Sbjct: 5 ETYDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIW 64 Query: 75 DTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNK 134 DTAGQERFR++T +YYRGA G +LVYD+T T+ + W A+ ++L GNK Sbjct: 65 DTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVIILCGNK 124 Query: 135 SDMET-RVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEKIDSNKL 189 D++ R VT + A+E + F+E+SA +NV E F A+ I KI+S +L Sbjct: 125 KDLDADREVTFLEASRFAQENELMFLETSALTGENVEEAFVQCARKILNKIESGEL 180 >2P5S-A nrPDB Length = 199 Score = 151 bits (382), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 74/181 (40%), Positives = 118/181 (65%), Gaps = 9/181 (4%) Query: 12 GNGKSYDS--IMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKV 69 G+ KS+ S KI+L GD+ VGKS L+R +++F + T+G+DF++KT+ ++G++ Sbjct: 18 GSAKSFSSQKAYKIVLAGDAAVGKSSFLMRLCKNEFRENISATLGVDFQMKTLIVDGERT 77 Query: 70 KLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLL 129 LQLWDTAGQERFR+I +Y+R A G++L+YDVT E++F NI++W + + A++ ++ Sbjct: 78 VLQLWDTAGQERFRSIAKSYFRKADGVLLLYDVTCEKSFLNIREWVDMIEDAAHETVPIM 137 Query: 130 LVGNKSDMETRVVTADQ-------GEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQE 182 LVGNK+D+ T Q GE LA G F E+SAK+ N+ E LA+ +++ Sbjct: 138 LVGNKADIRDTAATEGQKCVPGHFGEKLAMTYGALFCETSAKDGSNIVEAVLHLAREVKK 197 Query: 183 K 183 + Sbjct: 198 R 198 >3TSO-A nrPDB Length = 178 Score = 149 bits (376), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 73/169 (43%), Positives = 113/169 (66%), Gaps = 1/169 (0%) Query: 17 YDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDT 76 Y+ + K++LIG+SGVGK+ LL RF ++F+ TTIG++F +TV + VK Q+WDT Sbjct: 7 YNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDT 66 Query: 77 AGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSD 136 AG ER+R IT+AYYRGA+G +LV+D+T +T+ +++W K + +HA ++LVGNKSD Sbjct: 67 AGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSD 126 Query: 137 M-ETRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEKI 184 + + R V ++ A+ G+ F+E+SA + NV F T+ K I K+ Sbjct: 127 LSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKV 175 >2G77-B nrPDB Length = 198 Score = 144 bits (362), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 76/184 (41%), Positives = 113/184 (61%), Gaps = 9/184 (4%) Query: 6 TVSASSGN-GKSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDI 64 VS +SG + I KI++IGDS VGK+CL RF +F TIG+DF+ + VDI Sbjct: 14 AVSGASGCLPPARSRIFKIIVIGDSNVGKTCLTYRFCAGRFPDRTEATIGVDFRERAVDI 73 Query: 65 NGKKVKLQLWDTAGQERFR-TITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEH-- 121 +G+++K+QLWDTAGQERFR ++ YYR ++ VYD+T+ +F ++ W + +H Sbjct: 74 DGERIKIQLWDTAGQERFRKSMVQHYYRNVHAVVFVYDMTNMASFHSLPAWIEECKQHLL 133 Query: 122 ANDEAQLLLVGNKSDMETRV-VTADQGEALAKELGIPFIESSAKN---DDNVNEIFFTLA 177 AND + +LVGNK D+ + + V D + A +P E+SAKN +D+V IF TLA Sbjct: 134 ANDIPR-ILVGNKCDLRSAIQVPTDLAQKFADTHSMPLFETSAKNPNDNDHVEAIFMTLA 192 Query: 178 KLIQ 181 ++ Sbjct: 193 HKLK 196 >4G01-B nrPDB Length = 181 Score = 143 bits (361), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 73/173 (42%), Positives = 114/173 (65%), Gaps = 4/173 (2%) Query: 9 ASSGNGKSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKK 68 A++GN KS ++ K++L+GD G GKS L++RFV+D+F +TIG F +T+ +N Sbjct: 4 AAAGN-KSINA--KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDAT 60 Query: 69 VKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQL 128 VK ++WDTAGQER+ ++ YYRGA I+V+DVT++ +F K+W + + N + Sbjct: 61 VKFEIWDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVM 120 Query: 129 LLVGNKSD-METRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLI 180 L GNKSD ++ R VTA+ + A+E G+ F+E+SAK NV EIF+ +A+ + Sbjct: 121 ALAGNKSDLLDARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRL 173 >1Z06-A nrPDB Length = 189 Score = 142 bits (358), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 73/173 (42%), Positives = 108/173 (62%), Gaps = 8/173 (4%) Query: 16 SYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWD 75 S I KI++IGDS VGK+CL RF +F TIG+DF+ + VDI+G+++K+QLWD Sbjct: 16 SRSRIFKIIVIGDSNVGKTCLTYRFCAGRFPDRTEATIGVDFRERAVDIDGERIKIQLWD 75 Query: 76 TAGQERFR-TITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEH--ANDEAQLLLVG 132 TAGQERFR ++ YYR ++ VYD+T+ +F ++ W + +H AND + +LVG Sbjct: 76 TAGQERFRKSMVQHYYRNVHAVVFVYDMTNMASFHSLPAWIEECKQHLLANDIPR-ILVG 134 Query: 133 NKSDMETRV-VTADQGEALAKELGIPFIESSAKN---DDNVNEIFFTLAKLIQ 181 NK D+ + + V D + A +P E+SAKN +D+V IF TLA ++ Sbjct: 135 NKCDLRSAIQVPTDLAQKFADTHSMPLFETSAKNPNDNDHVEAIFMTLAHKLK 187 >1YVD-A nrPDB Length = 169 Score = 142 bits (357), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 67/161 (41%), Positives = 99/161 (61%), Gaps = 1/161 (0%) Query: 21 MKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQE 80 +K+ L+GD+GVGKS ++ RFVED F+P+ TIG F KTV + K +WDTAGQE Sbjct: 6 LKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQE 65 Query: 81 RFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSDM-ET 139 RFR + YYRG+ I+VYD+T E TF+ +K W + + +H + + GNK D+ + Sbjct: 66 RFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVRELRQHGPPSIVVAIAGNKCDLTDV 125 Query: 140 RVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLI 180 R V + A + F+E+SAKN N+NE+F +++ I Sbjct: 126 REVMERDAKDYADSIHAIFVETSAKNAININELFIEISRRI 166 >1YZU-A nrPDB Length = 170 Score = 139 bits (350), Expect = 9e-34, Method: Compositional matrix adjust. Identities = 68/163 (41%), Positives = 102/163 (62%), Gaps = 1/163 (0%) Query: 21 MKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQE 80 K++L+G+ VGK+ L++R+ E+KFN ITT+ F K ++I GK+V L +WDTAGQE Sbjct: 7 FKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQE 66 Query: 81 RFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSDMET- 139 RF + YYR + G ILVYD+TDE +F +K W K + + +E L +VGNK D+E Sbjct: 67 RFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKE 126 Query: 140 RVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQE 182 R V+ + E+ A+ +G +SAK + + E+F L K + E Sbjct: 127 RHVSIQEAESYAESVGAKHYHTSAKQNKGIEELFLDLCKRMIE 169 >4PHF-A nrPDB Length = 184 Score = 137 bits (346), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 74/167 (44%), Positives = 108/167 (64%), Gaps = 8/167 (4%) Query: 20 IMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVK-LQLWDTAG 78 I+K++++GDSGVGK+ L+ R+V DK++ + TIG DF K V ++G KV +Q+WDTAG Sbjct: 10 ILKVIILGDSGVGKTSLMHRYVNDKYSCQYKATIGADFLTKEVTVDGDKVATMQVWDTAG 69 Query: 79 QERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHAN----DEAQLLLVGNK 134 QERF+++ A+YRGA +LVYDVT+ +F NIK W HAN + +++GNK Sbjct: 70 QERFQSLGVAFYRGADCCVLVYDVTNASSFENIKSWRDEFLVHANVNSPETFPFVILGNK 129 Query: 135 SDME--TRVVTADQGEALAKELG-IPFIESSAKNDDNVNEIFFTLAK 178 D E ++V+ + LAK LG IP +SAKN NV+ F +A+ Sbjct: 130 IDAEESKKIVSEKSAQELAKSLGDIPLFLTSAKNAINVDTAFEEIAR 176 >1EK0-A nrPDB Length = 170 Score = 136 bits (342), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 69/167 (41%), Positives = 105/167 (62%), Gaps = 4/167 (2%) Query: 21 MKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQE 80 +K++L+G++ VGKS +++RFV + F + TIG F + V IN VK ++WDTAGQE Sbjct: 4 IKLVLLGEAAVGKSSIVLRFVSNDFAENKEPTIGAAFLTQRVTINEHTVKFEIWDTAGQE 63 Query: 81 RFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSDMET- 139 RF ++ YYR A ++VYDVT ++F + W K ++E A+ + + LVGNK DM Sbjct: 64 RFASLAPMYYRNAQAALVVYDVTKPQSFIKARHWVKELHEQASKDIIIALVGNKIDMLQE 123 Query: 140 ---RVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEK 183 R V ++GE LA+E G+ F E+SAK +NVN++F + + I K Sbjct: 124 GGERKVAREEGEKLAEEKGLLFFETSAKTGENVNDVFLGIGEKIPLK 170 >2FFQ-A nrPDB Length = 171 Score = 136 bits (342), Expect = 8e-33, Method: Compositional matrix adjust. Identities = 66/163 (40%), Positives = 105/163 (64%), Gaps = 1/163 (0%) Query: 21 MKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQE 80 K++ +G+ VGK+ L+ RF+ D F+ ++ TIGIDF KT+ + + V+LQLWDTAGQE Sbjct: 3 FKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 62 Query: 81 RFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSDM-ET 139 RFR++ +Y R + ++VYD+T+ +F +W V + ++LVGNK+D+ + Sbjct: 63 RFRSLIPSYIRDSTVAVVVYDITNLNSFQQTSKWIDDVRTERGSDVIIMLVGNKTDLADK 122 Query: 140 RVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQE 182 R +T ++GE AKEL + FIE+SAK NV ++F +A + E Sbjct: 123 RQITIEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVASALLE 165 >2HEI-A nrPDB Length = 179 Score = 135 bits (341), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 64/159 (40%), Positives = 103/159 (64%), Gaps = 1/159 (0%) Query: 21 MKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQE 80 K++L+G+S VGKS L++RFV+ +F+ +TIG F ++V ++ VK ++WDTAGQE Sbjct: 9 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQE 68 Query: 81 RFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSDMET- 139 R+ ++ YYRGA I+VYD+T++ TF K W K + A+ + L GNK+D+ Sbjct: 69 RYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLANK 128 Query: 140 RVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAK 178 R+V ++ +A A + + F+E+SAK NVN++F +AK Sbjct: 129 RMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAK 167 >1TU4-A nrPDB Length = 171 Score = 135 bits (339), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 66/159 (41%), Positives = 101/159 (63%), Gaps = 1/159 (0%) Query: 21 MKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQE 80 K++L+G+S VGKS L++RFV+ +F+ +TIG F +TV ++ VK ++WDTAGQE Sbjct: 8 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 67 Query: 81 RFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSDMET- 139 R+ ++ YYRGA I+VYD+T+E +F K W K + A+ + L GNK+D+ Sbjct: 68 RYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANK 127 Query: 140 RVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAK 178 R V + ++ A + + F+E+SAK NVNEIF +AK Sbjct: 128 RAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAK 166 >2GIL-A nrPDB Length = 162 Score = 133 bits (334), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 65/158 (41%), Positives = 103/158 (65%), Gaps = 1/158 (0%) Query: 21 MKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQE 80 K++ +G+ VGK+ L+ RF+ D F+ ++ TIGIDF KT+ + + V+LQLWDTAGQE Sbjct: 2 FKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 61 Query: 81 RFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSDM-ET 139 RFR++ +Y R + ++VYD+T+ +F +W V + ++LVGNK+D+ + Sbjct: 62 RFRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTDLADK 121 Query: 140 RVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLA 177 R V+ ++GE AKEL + FIE+SAK NV ++F +A Sbjct: 122 RQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVA 159 >2FG5-A nrPDB Length = 192 Score = 133 bits (334), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 62/161 (38%), Positives = 99/161 (61%), Gaps = 1/161 (0%) Query: 21 MKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQE 80 +K+ L+GD+GVGKS ++ RFV+D F+ + TIG F KTV + K +WDTAGQE Sbjct: 24 LKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQE 83 Query: 81 RFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSDM-ET 139 RF ++ YYRG+ ++VYD+T + +F +K+W K + EH + + + GNK D+ + Sbjct: 84 RFHSLAPMYYRGSAAAVIVYDITKQDSFYTLKKWVKELKEHGPENIVMAIAGNKCDLSDI 143 Query: 140 RVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLI 180 R V + A+ +G +E+SAKN N+ E+F +++ I Sbjct: 144 REVPLKDAKEYAESIGAIVVETSAKNAINIEELFQGISRQI 184 >4KYI-B nrPDB Length = 170 Score = 133 bits (334), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 66/159 (41%), Positives = 100/159 (62%), Gaps = 1/159 (0%) Query: 21 MKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQE 80 K++L+G+S VGKS L++RFV+ +F+ +TIG F +TV ++ VK ++WDTAG E Sbjct: 10 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGLE 69 Query: 81 RFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSDMET- 139 R+ ++ YYRGA I+VYD+T+ TF K W K + A+ + L GNK+D+ + Sbjct: 70 RYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASK 129 Query: 140 RVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAK 178 R V + +A A + + F+E+SAK NVNEIF +AK Sbjct: 130 RAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAK 168 >5YOZ-A nrPDB Length = 177 Score = 131 bits (330), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 66/158 (41%), Positives = 104/158 (65%), Gaps = 2/158 (1%) Query: 22 KILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQER 81 KI+++G+SG GKS + +RF ++F + TTIG F KTV I+G+ +K ++WDTAG ER Sbjct: 17 KIVMLGESGAGKSSIALRFTRNEFLANQETTIGAAFLSKTVMIDGRALKYEIWDTAGLER 76 Query: 82 FRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSDM-ETR 140 FR++ YYRGA G ++VYD+T+ + + W K + +A+ ++LVGNK D+ R Sbjct: 77 FRSLAPIYYRGASGALVVYDITNSESLKKAQTWIKELRANADPSLIIVLVGNKKDLGSLR 136 Query: 141 VVTADQGEALAKELGI-PFIESSAKNDDNVNEIFFTLA 177 V+ + G+ LA E + F E+SAK+++NV ++F LA Sbjct: 137 QVSFEDGQRLAAEEQLAAFYEASAKDNNNVEQVFLDLA 174 >2OCB-A nrPDB Length = 180 Score = 131 bits (329), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 67/167 (40%), Positives = 108/167 (64%), Gaps = 7/167 (4%) Query: 12 GNGKSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKL 71 G+GKS ++K++L+GD GVGKS L+ R+V +KF+ TIG++F + ++++G+ V L Sbjct: 1 GSGKSL--LLKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFVTL 58 Query: 72 QLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHAN----DEAQ 127 Q+WDTAGQERF+++ T +YRGA +L + V D ++F N+ W K +A+ + Sbjct: 59 QIWDTAGQERFKSLRTPFYRGADCCLLTFSVDDRQSFENLGNWQKEFIYYADVKDPEHFP 118 Query: 128 LLLVGNKSDMETRVVTADQGEALAKELG-IPFIESSAKNDDNVNEIF 173 +++GNK D E R VT ++ + E G P++E+SAK+D NV F Sbjct: 119 FVVLGNKVDKEDRQVTTEEAQTWCMENGDYPYLETSAKDDTNVTVAF 165 >5LEF-A nrPDB Length = 191 Score = 130 bits (326), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 64/157 (40%), Positives = 102/157 (64%), Gaps = 1/157 (0%) Query: 22 KILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQER 81 K++ +G+ VGK+ L+ RF+ D F+ ++ TIGIDF KT+ + + V+LQLWDTAG ER Sbjct: 11 KLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGLER 70 Query: 82 FRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSDM-ETR 140 FR++ +Y R + ++VYD+T+ +F +W V + ++LVGNK+D+ + R Sbjct: 71 FRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTDLADKR 130 Query: 141 VVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLA 177 V+ ++GE AKEL + FIE+SAK NV ++F +A Sbjct: 131 QVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVA 167 >4QXA-A nrPDB Length = 208 Score = 128 bits (321), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 65/165 (39%), Positives = 106/165 (64%), Gaps = 7/165 (4%) Query: 14 GKSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQL 73 GKS S+ KI+L+GD GVGKS L+ R+V +KF+ TIG++F K ++++G V +Q+ Sbjct: 4 GKS--SLFKIILLGDGGVGKSSLMNRYVTNKFDSQLFHTIGVEFLNKDLEVDGHFVTMQI 61 Query: 74 WDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHAN----DEAQLL 129 WDTAG ERFR++ T +YRG+ +L + V D ++F N+ W K +A+ + + Sbjct: 62 WDTAGLERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFV 121 Query: 130 LVGNKSDMETRVVTADQGEALAKELG-IPFIESSAKNDDNVNEIF 173 ++GNK+D++ R V+ ++ +A K+ G P+ E+SAK+ NV F Sbjct: 122 ILGNKTDIKERQVSTEEAQAWCKDNGDYPYFETSAKDSTNVAAAF 166 >1WMS-A nrPDB Length = 177 Score = 127 bits (319), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 64/165 (38%), Positives = 105/165 (63%), Gaps = 7/165 (4%) Query: 14 GKSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQL 73 GKS S+ K++L+GD GVGKS L+ R+V +KF+ TIG++F K ++++G V +Q+ Sbjct: 3 GKS--SLFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQI 60 Query: 74 WDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHAN----DEAQLL 129 WDTAGQERFR++ T +YRG+ +L + V D ++F N+ W K +A+ + + Sbjct: 61 WDTAGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFV 120 Query: 130 LVGNKSDMETRVVTADQGEALAKELG-IPFIESSAKNDDNVNEIF 173 ++GNK D+ R V+ ++ +A ++ G P+ E+SAK+ NV F Sbjct: 121 ILGNKIDISERQVSTEEAQAWCRDNGDYPYFETSAKDATNVAAAF 165 >1D5C-A nrPDB Length = 162 Score = 124 bits (310), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 60/153 (39%), Positives = 99/153 (64%), Gaps = 1/153 (0%) Query: 22 KILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQER 81 K++ +G+ VGK+ ++ RF+ D F+ ++ +TIGIDF KT+ ++ V+LQLWDTAGQER Sbjct: 3 KLVFLGEQAVGKTSIITRFMYDTFDNNYQSTIGIDFLSKTLYLDEGPVRLQLWDTAGQER 62 Query: 82 FRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSDM-ETR 140 FR++ +Y R + I+VYD+T+ ++F N +W + + + + LVGNK+D+ + R Sbjct: 63 FRSLIPSYIRDSAAAIVVYDITNRQSFENTTKWIQDILNERGKDVIIALVGNKTDLGDLR 122 Query: 141 VVTADQGEALAKELGIPFIESSAKNDDNVNEIF 173 VT ++G A+E F E+SAK N+ +F Sbjct: 123 KVTYEEGMQKAQEYNTMFHETSAKAGHNIKVLF 155 >5LDD-C nrPDB Length = 207 Score = 120 bits (302), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 63/173 (36%), Positives = 108/173 (62%), Gaps = 9/173 (5%) Query: 20 IMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQ 79 ++K++++GDSGVGK+ L+ ++V KF+ S+ TIG DF + V ++ ++V +QLWDTAGQ Sbjct: 10 LLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTREVMVDDRQVTMQLWDTAGQ 69 Query: 80 ERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQW----FKTVNEHANDEAQLLLVGNKS 135 ERF+++ A+YRGA +LV+DV + ++F + W + + +++G K Sbjct: 70 ERFQSLGVAFYRGADCCVLVFDVNNAKSFDALDSWRDEFLIQASPRDPENFPFVVLGIKI 129 Query: 136 DMET--RVVTADQGEALAKEL-GIPFIESSAKNDDNVNEIFFTLAK--LIQEK 183 D+E RV++ + + + GIP+ E+SAK NV E F +A+ L+QE+ Sbjct: 130 DVEESKRVISTKRAQTFCQSKGGIPYFETSAKEAINVEEAFQVIARNALMQEE 182 >1Z22-A nrPDB Length = 168 Score = 118 bits (296), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 62/159 (38%), Positives = 93/159 (58%), Gaps = 2/159 (1%) Query: 21 MKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQE 80 +K++++G+ VGKS ++ R+ + F + TIG+DF + + +N + V+L LWDTAGQE Sbjct: 6 IKMVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQIQVNDEDVRLMLWDTAGQE 65 Query: 81 RFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSD-MET 139 F IT AYYRGA +LV+ TD +F I W + V D LV NK D ++ Sbjct: 66 EFDAITKAYYRGAQACVLVFSTTDRESFEAISSWREKVVAEVGD-IPTALVQNKIDLLDD 124 Query: 140 RVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAK 178 + ++ E LAK L + F +S K D NV+E+F LA+ Sbjct: 125 SCIKNEEAEGLAKRLKLRFYRTSVKEDLNVSEVFKYLAE 163 >6IYB-A nrPDB Length = 199 Score = 113 bits (282), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 61/164 (37%), Positives = 98/164 (59%), Gaps = 6/164 (3%) Query: 20 IMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQ 79 ++K++++GDSGVGK+ L+ ++V KF+ + TIG DF K V ++ + V +Q+WDTAG Sbjct: 13 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGL 72 Query: 80 ERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQW----FKTVNEHANDEAQLLLVGNKS 135 ERF++ A+YRGA +LV+DVT TF + W + + +++GNK Sbjct: 73 ERFQS-GVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKI 131 Query: 136 DMETRVVTADQGEALA-KELGIPFIESSAKNDDNVNEIFFTLAK 178 D+E R V + +A + IP+ E+SAK NV + F T+A+ Sbjct: 132 DLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIAR 175 >5CM8-B nrPDB Length = 203 Score = 109 bits (272), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 56/181 (30%), Positives = 108/181 (59%), Gaps = 3/181 (1%) Query: 19 SIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAG 78 ++ K++++G GVGKS L ++F+ D+F + T ++ K V ++G++V++ + DTAG Sbjct: 12 ALHKVIMVGSGGVGKSALTLQFMYDEFVEDYEPTKADSYRKKVV-LDGEEVQIDILDTAG 70 Query: 79 QERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEA-QLLLVGNKSDM 137 QE + I Y+R G + V+ +TD+ +F +++ + + NDE+ LLVGNK D+ Sbjct: 71 QEDYAAIRDNYFRSGEGFLCVFSITDDESFQATQEFREQILRVKNDESIPFLLVGNKCDL 130 Query: 138 -ETRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEKIDSNKLVGVGNGK 196 + R V + + A++ +P++E+SAK +NV+++FF L + I+ + + G K Sbjct: 131 NDKRKVPLSECQLRAQQWAVPYVETSAKTRENVDKVFFDLMREIRSRKTEDSKATSGRAK 190 Query: 197 E 197 + Sbjct: 191 D 191 >4KLZ-A nrPDB Length = 173 Score = 106 bits (264), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 57/174 (32%), Positives = 99/174 (56%), Gaps = 7/174 (4%) Query: 12 GNGKSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKL 71 G+ + Y K++++G GVGKS + ++F+ +F TI +KI+ + I+ + L Sbjct: 1 GSSREY----KLVMLGAGGVGKSAMTMQFISHRFPEDHDPTIEDAYKIR-IRIDDEPANL 55 Query: 72 QLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNE-HANDEAQLLL 130 + DTAGQ F + Y R G I+ Y +TD R+F ++++ + + D+ ++L Sbjct: 56 DILDTAGQAEFTAMRDQYMRAGEGFIICYSITDRRSFHEVREFKQLIYRVRRTDDTPVVL 115 Query: 131 VGNKSDM-ETRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEK 183 VGNKSD+ + R VT ++G ALA+E PF E+SA ++++F L + I+ K Sbjct: 116 VGNKSDLKQLRQVTKEEGLALAREFSCPFFETSAAYRYYIDDVFHALVREIRRK 169 >2KE5-A nrPDB Length = 174 Score = 105 bits (261), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 58/174 (33%), Positives = 108/174 (62%), Gaps = 5/174 (2%) Query: 19 SIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAG 78 ++ K++++G GVGKS L ++F+ D+F + T ++ K V ++G++V++ + DTAG Sbjct: 2 ALHKVIMVGSGGVGKSALTLQFMYDEFVEDYEPTKADSYRKKVV-LDGEEVQIDILDTAG 60 Query: 79 QERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTV--NEHANDEAQLLLVGNKSD 136 E + I Y+R G +LV+ +T+ +FT ++ + + + D+ LL+VGNKSD Sbjct: 61 LEDYAAIRDNYFRSGEGFLLVFSITEHESFTATAEFREQILRVKAEEDKIPLLVVGNKSD 120 Query: 137 MET-RVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQ-EKIDSNK 188 +E R V ++ + A+E G+ ++E+SAK NV+++FF L + I+ +K+ NK Sbjct: 121 LEERRQVPVEEARSKAEEWGVQYVETSAKTRANVDKVFFDLMREIRTKKMSENK 174 >4M8N-E nrPDB Length = 199 Score = 103 bits (256), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 60/162 (37%), Positives = 98/162 (60%), Gaps = 4/162 (2%) Query: 22 KILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQER 81 K++++G GVGKS L V+FV+ F + TI ++ K V+++ ++ L++ DTAG E+ Sbjct: 8 KLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYR-KQVEVDAQQCMLEILDTAGTEQ 66 Query: 82 FRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTV-NEHANDEAQLLLVGNKSDME-T 139 F + Y + G LVY +T + TF +++ + + D+ ++LVGNK D+E Sbjct: 67 FTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTDDVPMILVGNKCDLEDE 126 Query: 140 RVVTADQGEALAKELG-IPFIESSAKNDDNVNEIFFTLAKLI 180 RVV +QG+ LA++ F+ESSAK+ NVNEIF+ L + I Sbjct: 127 RVVGKEQGQNLARQWNNCAFLESSAKSKINVNEIFYDLVRQI 168 >4DXA-A nrPDB Length = 169 Score = 102 bits (255), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 60/162 (37%), Positives = 98/162 (60%), Gaps = 4/162 (2%) Query: 22 KILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQER 81 K++++G GVGKS L V+FV+ F + TI ++ K V+++ ++ L++ DTAG E+ Sbjct: 7 KLVVLGSVGVGKSALTVQFVQGIFVEKYDPTIEDSYR-KQVEVDAQQCMLEILDTAGTEQ 65 Query: 82 FRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTV-NEHANDEAQLLLVGNKSDME-T 139 F + Y + G LVY +T + TF +++ + + D+ ++LVGNK D+E Sbjct: 66 FTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTDDVPMILVGNKCDLEDE 125 Query: 140 RVVTADQGEALAKEL-GIPFIESSAKNDDNVNEIFFTLAKLI 180 RVV +QG+ LA++ F+ESSAK+ NVNEIF+ L + I Sbjct: 126 RVVGKEQGQNLARQWNNCAFLESSAKSKINVNEIFYDLVRQI 167 >2J0V-A nrPDB Length = 212 Score = 101 bits (252), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 59/183 (32%), Positives = 99/183 (54%), Gaps = 13/183 (7%) Query: 12 GNGKSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKL 71 G+ S +K + +GD VGK+C+L+ + +KF +I T+ +F V ++G+ V L Sbjct: 1 GSHMSVSKFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFS-ANVAVDGQIVNL 59 Query: 72 QLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNI-KQWFKTVNEHANDEAQLLL 130 LWDTAGQE + + YRGA +L + + + ++ N+ K+W + A + ++L Sbjct: 60 GLWDTAGQEDYSRLRPLSYRGADIFVLAFSLISKASYENVLKKWMPELRRFAPN-VPIVL 118 Query: 131 VGNKSDM---------ETRVVTADQGEALAKELG-IPFIESSAKNDDNVNEIFFTLAKLI 180 VG K D+ T V+T+ QGE L K++G +IE S+K NV +F T K++ Sbjct: 119 VGTKLDLRDDKGYLADHTNVITSTQGEELRKQIGAAAYIECSSKTQQNVKAVFDTAIKVV 178 Query: 181 QEK 183 + Sbjct: 179 LQP 181 >5XC3-A nrPDB Length = 176 Score = 101 bits (251), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 56/155 (36%), Positives = 93/155 (60%), Gaps = 3/155 (1%) Query: 22 KILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDI-NGKKVKLQLWDTAGQE 80 KI+LIG SGVGKS ++ +F+ ++ + TIG F K V NGK +KL +WDTAGQE Sbjct: 7 KIILIGSSGVGKSSIVHQFLFNRKISNVSPTIGAAFASKQVIAKNGKTLKLNIWDTAGQE 66 Query: 81 RFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSDMETR 140 RFR+IT YY ++G ++V+DVTD +F ++ W + + + +L+V NK D++ Sbjct: 67 RFRSITKMYYTNSLGCLVVFDVTDRESFDDVYYWINDLRINCHTTYYILVVANKIDIDKN 126 Query: 141 --VVTADQGEALAKELGIPFIESSAKNDDNVNEIF 173 V+ ++ + ++ ++ +S+ D VN +F Sbjct: 127 NWRVSENEIKKFCRDNDCDYVFASSFESDTVNNLF 161 >4CZ2-A nrPDB Length = 230 Score = 99.4 bits (246), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 56/177 (31%), Positives = 101/177 (57%), Gaps = 11/177 (6%) Query: 15 KSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKK-VKLQL 73 ++ + + K+L+IG+ GVGK+ ++ R+V F+ + TIG+DF +K ++ + + V+LQL Sbjct: 25 ETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQL 84 Query: 74 WDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHAN----DEAQLL 129 WD AG ERF +T YY+ AMG +V+D++ TF + +W ++ + + Sbjct: 85 WDIAGLERFGNMTRVYYKEAMGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAV 144 Query: 130 LVGNKSDM-ETRVVTADQGEALAKELGIP-FIESSAKNDDNVNEIFFTLAKLIQEKI 184 L+ NK D + ++ Q + KE G + E+SAK++ N+ E A+ + EK+ Sbjct: 145 LLANKCDQNKDSSMSPSQMDQFCKEHGFAGWFETSAKDNINIEEA----ARFLVEKM 197 >6FF8-A nrPDB Length = 181 Score = 97.1 bits (240), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 57/178 (32%), Positives = 99/178 (55%), Gaps = 11/178 (6%) Query: 18 DSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKK-VKLQLWDT 76 + + K+L+IG+ GVGK+ ++ R+V F+ + TIG+DF +K ++ + + V+LQLWD Sbjct: 6 EHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDI 65 Query: 77 AGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHAN----DEAQLLLVG 132 AG ERF +T YY+ A+G +V+D++ TF + +W ++ + +L+ Sbjct: 66 AGLERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLA 125 Query: 133 NKSDM-ETRVVTADQGEALAKELGIP-FIESSAKNDDNVNEIFFTLAKLIQEKIDSNK 188 NK D + + Q + KE G + E+SAK++ N+ E A+ + EKI N Sbjct: 126 NKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEA----ARFLVEKILVNH 179 >2J1L-A nrPDB Length = 214 Score = 96.3 bits (238), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 52/168 (30%), Positives = 93/168 (55%), Gaps = 17/168 (10%) Query: 21 MKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQE 80 +K++L+GD G GK+ LL+ F + F S+ T+ + + + + GK V L +WDTAGQ+ Sbjct: 35 VKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMV-NLQVKGKPVHLHIWDTAGQD 93 Query: 81 RFRTITTAYYRGAMGIILVYDVTDERTFTNI-KQWFKTVNEHANDEAQLLLVGNKSDME- 138 + + +Y A ++L +DVT +F NI +W+ VN H + +++VG K+D+ Sbjct: 94 DYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVN-HFCKKVPIIVVGCKTDLRK 152 Query: 139 ------------TRVVTADQGEALAKELG-IPFIESSAKNDDNVNEIF 173 VT +G+ +A+ +G + ++E SA+ DNV+ +F Sbjct: 153 DKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVF 200 >3CON-A nrPDB Length = 190 Score = 95.5 bits (236), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 51/151 (33%), Positives = 85/151 (56%), Gaps = 2/151 (1%) Query: 33 KSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQERFRTITTAYYRG 92 KS L ++ +++ F + TI ++ K V I+G+ L + DTAGQE + + Y R Sbjct: 34 KSALTIQLIQNHFVDEYDPTIEDSYR-KQVVIDGETCLLDILDTAGQEEYSAMRDQYMRT 92 Query: 93 AMGIILVYDVTDERTFTNIKQWFKTVNE-HANDEAQLLLVGNKSDMETRVVTADQGEALA 151 G + V+ + + ++F +I + + + +D+ ++LVGNK D+ TR V Q LA Sbjct: 93 GEGFLCVFAINNSKSFADINLYREQIKRVKDSDDVPMVLVGNKCDLPTRTVDTKQAHELA 152 Query: 152 KELGIPFIESSAKNDDNVNEIFFTLAKLIQE 182 K GIPFIE+SAK V + F+TL + I++ Sbjct: 153 KSYGIPFIETSAKTRQGVEDAFYTLVREIRQ 183 >1ZC4-A nrPDB Length = 175 Score = 95.5 bits (236), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 52/167 (31%), Positives = 99/167 (59%), Gaps = 3/167 (1%) Query: 19 SIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAG 78 ++ K++++G GVGKS L ++F+ D+F + T ++ K V ++G++V++ + DTAG Sbjct: 5 ALHKVIMVGSGGVGKSALTLQFMYDEFVEDYEPTKADSYRKKVV-LDGEEVQIDILDTAG 63 Query: 79 QERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDE-AQLLLVGNKSDM 137 E + I Y+R G + V+ +T+ +F + + + DE LLVGNKSD+ Sbjct: 64 LEDYAAIRDNYFRSGEGFLCVFSITEMESFAATADFREQILRVKEDENVPFLLVGNKSDL 123 Query: 138 E-TRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEK 183 E R V+ ++ + A++ + ++E+SAK NV+++FF L + I+ + Sbjct: 124 EDKRQVSVEEAKNRAEQWNVNYVETSAKTRANVDKVFFDLMREIRAR 170 >5UHV-A nrPDB Length = 166 Score = 95.1 bits (235), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 51/151 (33%), Positives = 85/151 (56%), Gaps = 2/151 (1%) Query: 33 KSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQERFRTITTAYYRG 92 KS L ++ +++ F + TI ++ K V I+G+ L + DTAGQE + + Y R Sbjct: 16 KSALTIQLIQNHFVDEYDPTIEDSYR-KQVVIDGETCLLDILDTAGQEEYSAMRDQYMRT 74 Query: 93 AMGIILVYDVTDERTFTNIKQWFKTVNE-HANDEAQLLLVGNKSDMETRVVTADQGEALA 151 G + V+ + + ++F +I + + + +D+ ++LVGNK D+ TR V Q LA Sbjct: 75 GEGFLCVFAINNSKSFADINLYREQIKRVKDSDDVPMVLVGNKCDLPTRTVDTKQAHELA 134 Query: 152 KELGIPFIESSAKNDDNVNEIFFTLAKLIQE 182 K GIPFIE+SAK V + F+TL + I++ Sbjct: 135 KSYGIPFIETSAKTRQGVEDAFYTLVREIRQ 165 >3BWD-D nrPDB Length = 182 Score = 94.4 bits (233), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 56/171 (32%), Positives = 89/171 (52%), Gaps = 15/171 (8%) Query: 16 SYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWD 75 S +K + +GD VGK+CLL+ + + F ++ T+ +F V +NG V L LWD Sbjct: 4 SASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VNGATVNLGLWD 62 Query: 76 TAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNI-KQWFKTVNEHANDEAQLLLVGNK 134 TAGQE + + YRGA IL + + + ++ N+ K+W + +A ++LVG K Sbjct: 63 TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPG-VPIVLVGTK 121 Query: 135 SDME-----------TRVVTADQGEALAKELGIP-FIESSAKNDDNVNEIF 173 D+ +T QGE L K +G P +IE S+K+ +NV +F Sbjct: 122 LDLRDDKQFFIDHPGAVPITTVQGEELKKLIGAPAYIECSSKSQENVKGVF 172 >5WDQ-A nrPDB Length = 170 Score = 93.6 bits (231), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 49/151 (32%), Positives = 86/151 (56%), Gaps = 2/151 (1%) Query: 33 KSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQERFRTITTAYYRG 92 KS L ++ +++ F + TI ++ K V I+G+ L + DTAGQE + + Y R Sbjct: 20 KSALTIQLIQNHFVDEYDPTIEDSYR-KQVVIDGETCLLDILDTAGQEEYSAMRDQYMRT 78 Query: 93 AMGIILVYDVTDERTFTNIKQWFKTVNE-HANDEAQLLLVGNKSDMETRVVTADQGEALA 151 G + V+ + + ++F +I Q+ + + +D+ ++LVGNK D R V + Q + LA Sbjct: 79 GEGFLCVFAINNTKSFEDIHQYREQIKRVKDSDDVPMVLVGNKCDAAARTVESRQAQDLA 138 Query: 152 KELGIPFIESSAKNDDNVNEIFFTLAKLIQE 182 + GIP+IE+SAK V + F+TL + I++ Sbjct: 139 RSYGIPYIETSAKTRQGVEDAFYTLVREIRQ 169 >2NTY-C nrPDB Length = 180 Score = 92.8 bits (229), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 54/176 (30%), Positives = 91/176 (51%), Gaps = 15/176 (8%) Query: 21 MKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQE 80 +K + +GD VGK+C+L+ + + F ++ T+ +F V ++G V L LWDTAGQE Sbjct: 7 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGNTVNLGLWDTAGQE 65 Query: 81 RFRTITTAYYRGAMGIILVYDVTDERTFTNI-KQWFKTVNEHANDEAQLLLVGNKSDME- 138 + + YRGA IL + + + ++ N+ K+W + +A ++LVG K D+ Sbjct: 66 DYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPG-VPIILVGTKLDLRD 124 Query: 139 ----------TRVVTADQGEALAKELGIP-FIESSAKNDDNVNEIFFTLAKLIQEK 183 +T +QGE L K +G P +IE S+K NV +F K++ + Sbjct: 125 DKQFFIDHPGAVPITTNQGEELKKLIGSPIYIECSSKTQQNVKAVFDAAIKVVLQP 180 >3T5G-A nrPDB Length = 181 Score = 92.4 bits (228), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 62/166 (37%), Positives = 94/166 (56%), Gaps = 4/166 (2%) Query: 22 KILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQER 81 KI ++G VGKS L ++FVE +F S+ TI F K + +NG++ LQL DTAGQ+ Sbjct: 8 KIAILGYRSVGKSSLTIQFVEGQFVDSYDPTIENTFT-KLITVNGQEYHLQLVDTAGQDE 66 Query: 82 FRTITTAYYRGAMGIILVYDVTDERTFTNIKQWF-KTVNEHANDEAQLLLVGNKSDMET- 139 + Y G ILVY VT ++F IK K ++ + ++LVGNK D+ Sbjct: 67 YSIFPQTYSIDINGYILVYSVTSIKSFEVIKVIHGKLLDMVGKVQIPIMLVGNKKDLHME 126 Query: 140 RVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEKID 185 RV++ ++G+ALA+ F+ESSAK + ++F + L EK+D Sbjct: 127 RVISYEEGKALAESWNAAFLESSAKENQTAVDVFRRII-LEAEKMD 171 >3E5H-A nrPDB Length = 178 Score = 92.0 bits (227), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 54/162 (33%), Positives = 89/162 (54%), Gaps = 5/162 (3%) Query: 21 MKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGK-KVKLQLWDTAGQ 79 +KI+++GD GK+ L F ++ F + TIG+DF ++ + + G V LQ+WD GQ Sbjct: 7 LKIVVLGDGASGKTSLTTCFAQETFGKQYKQTIGLDFFLRRITLPGNLNVTLQIWDIGGQ 66 Query: 80 ERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWF---KTVNEHANDEAQLLLVGNKSD 136 + Y GA G++LVYD+T+ ++F N++ W+ K V+E + + + LVGNK D Sbjct: 67 TIGGKMLDKYIYGAQGVLLVYDITNYQSFENLEDWYTVVKKVSEESETQPLVALVGNKID 126 Query: 137 ME-TRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLA 177 +E R + ++ +E G SAK D+V F +A Sbjct: 127 LEHMRTIKPEKHLRFCQENGFSSHFVSAKTGDSVFLCFQKVA 168 >3PIR-A nrPDB Length = 183 Score = 92.0 bits (227), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 64/186 (34%), Positives = 109/186 (58%), Gaps = 8/186 (4%) Query: 1 MSGLRTVSASSGNGKSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIK 60 + + T + S N +Y K++++GD GVGKS L ++F + F P + TI D +K Sbjct: 3 LGSMATSAVPSENLPTY----KLVVVGDGGVGKSALTIQFFQKIFVPEYDPTIE-DSYLK 57 Query: 61 TVDINGKKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNE 120 +I+ + L + DTAGQE F + Y R G ++VY VTD+ +F ++ ++ + + Sbjct: 58 HTEIDNQWAILDVLDTAGQEEFSAMREQYMRTGDGFLIVYSVTDKASFEHVDRFHQLILR 117 Query: 121 HANDEA-QLLLVGNKSD-METRVVTADQGEALAKELGIPFIESSAKNDD-NVNEIFFTLA 177 + E+ ++LV NK D M R VT DQG+ +A + IP+IE+SAK+ NV++ F L Sbjct: 118 VKDRESFPMILVANKVDLMHLRKVTRDQGKEMATKYNIPYIETSAKDPPLNVDKTFHDLV 177 Query: 178 KLIQEK 183 ++I+++ Sbjct: 178 RVIRQQ 183 >4DJT-A nrPDB Length = 218 Score = 90.9 bits (224), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 54/166 (32%), Positives = 86/166 (51%), Gaps = 2/166 (1%) Query: 22 KILLIGDSGVGKSCLLVRFVEDKFNPSFITTIG-IDFKIKTVDINGKKVKLQLWDTAGQE 80 KI LIGD GVGK+ + R ++ +F ++ T+G ++ + +D G +K +WDTAGQE Sbjct: 13 KICLIGDGGVGKTTYINRVLDGRFEKNYNATVGAVNHPVTFLDDQGNVIKFNVWDTAGQE 72 Query: 81 RFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSDMETR 140 + + YY GA G IL +DVT T N+ +W K +EA +++ NK D++ R Sbjct: 73 KKAVLKDVYYIGASGAILFFDVTSRITCQNLARWVKEFQAVVGNEAPIVVCANKIDIKNR 132 Query: 141 V-VTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEKID 185 ++ + K + E SAK N F LA++ + D Sbjct: 133 QKISKKLVMEVLKGKNYEYFEISAKTAHNFGLPFLHLARIFTGRPD 178 >5ZHX-e nrPDB Length = 198 Score = 90.9 bits (224), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 48/166 (28%), Positives = 88/166 (53%), Gaps = 15/166 (9%) Query: 22 KILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQER 81 K++++GD GK+CLL+ F +D+F ++ T+ ++ + ++++GK+V+L LWDTAGQE Sbjct: 12 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQED 70 Query: 82 FRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSD----- 136 + + Y I++ + + + NI + + +H ++LVGNK D Sbjct: 71 YDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDE 130 Query: 137 --------METRVVTADQGEALAKELG-IPFIESSAKNDDNVNEIF 173 M+ V ++G +A +G ++E SAK D V E+F Sbjct: 131 HTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVF 176 >4U5X-A nrPDB Length = 178 Score = 90.9 bits (224), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 54/175 (30%), Positives = 92/175 (52%), Gaps = 15/175 (8%) Query: 21 MKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQE 80 +K + +GD VGK+C+L+ + +KF +I T+ +F V ++G V L LWDTAG E Sbjct: 6 IKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFS-ANVSVDGSVVNLGLWDTAGLE 64 Query: 81 RFRTITTAYYRGAMGIILVYDVTDERTFTNI-KQWFKTVNEHANDEAQLLLVGNKSDME- 138 + + YRGA IL + + ++ N+ K+W + A ++LVG K D+ Sbjct: 65 DYSRLRPLSYRGADVFILSFSLISRASYENVQKKWMPELRRFAPG-VPVVLVGTKLDLRE 123 Query: 139 ----------TRVVTADQGEALAKELG-IPFIESSAKNDDNVNEIFFTLAKLIQE 182 + ++T +QGE L K +G + +IE S+K N+ +F T K++ + Sbjct: 124 DRAYLADHPASSIITTEQGEELRKLIGAVAYIECSSKTQRNIKAVFDTAIKVVLQ 178 >5C2K-A nrPDB Length = 415 Score = 90.1 bits (222), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 48/166 (28%), Positives = 88/166 (53%), Gaps = 15/166 (9%) Query: 22 KILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQER 81 K++++GD GK+CLL+ F +D+F ++ T+ ++ + ++++GK+V+L LWDTAGQE Sbjct: 14 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQED 72 Query: 82 FRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSD----- 136 + + Y I++ + + + NI + + +H ++LVGNK D Sbjct: 73 YDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDE 132 Query: 137 --------METRVVTADQGEALAKELG-IPFIESSAKNDDNVNEIF 173 M+ V ++G +A +G ++E SAK D V E+F Sbjct: 133 HTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVF 178 >4WA7-A nrPDB Length = 170 Score = 89.7 bits (221), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 48/151 (31%), Positives = 85/151 (56%), Gaps = 2/151 (1%) Query: 33 KSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQERFRTITTAYYRG 92 KS L ++ +++ F + TI ++ K V I+G+ L + DTAG E + + Y R Sbjct: 17 KSALTIQLIQNHFVDEYDPTIEDSYR-KQVVIDGETCLLDILDTAGLEEYSAMRDQYMRT 75 Query: 93 AMGIILVYDVTDERTFTNIKQWFKTVNEHANDE-AQLLLVGNKSDMETRVVTADQGEALA 151 G + V+ + + ++F +I + + + + E ++LVGNK D+ +R V Q + LA Sbjct: 76 GEGFLCVFAINNTKSFEDIHHYREQIKRVKDSEDVPMVLVGNKCDLPSRTVDTKQAQDLA 135 Query: 152 KELGIPFIESSAKNDDNVNEIFFTLAKLIQE 182 + GIPFIE+SAK V++ F+TL + I++ Sbjct: 136 RSYGIPFIETSAKTRQGVDDAFYTLVREIRK 166 >3CLV-A nrPDB Length = 208 Score = 89.0 bits (219), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 61/208 (29%), Positives = 96/208 (46%), Gaps = 39/208 (18%) Query: 14 GKSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDI--------- 64 G S K +L+G+S VGKS +++R +D F+ + TTIG F V++ Sbjct: 1 GMEKKSSYKTVLLGESSVGKSSIVLRLTKDTFHENTNTTIGASFCTYVVNLNDINIKNNS 60 Query: 65 ----------------------------NGKKVKLQLWDTAGQERFRTITTAYYRGAMGI 96 N +K +WDTAGQER+ +I YYRGA Sbjct: 61 NNEKNNNINSINDDNNVIITNQHNNYNENLCNIKFDIWDTAGQERYASIVPLYYRGATCA 120 Query: 97 ILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSDMETRVVTADQGEALAKELGI 156 I+V+D+++ T K W + +N ++LV NK D V + + A++ + Sbjct: 121 IVVFDISNSNTLDRAKTWVNQLKISSN--YIIILVANKIDKNKFQVDILEVQKYAQDNNL 178 Query: 157 PFIESSAKNDDNVNEIFFTLAKLIQEKI 184 FI++SAK N+ IF+ LA+ I + I Sbjct: 179 LFIQTSAKTGTNIKNIFYMLAEEIYKNI 206 >4KU4-A nrPDB Length = 206 Score = 88.6 bits (218), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 61/192 (31%), Positives = 103/192 (53%), Gaps = 24/192 (12%) Query: 7 VSASSGNGKSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDING 66 ++ S G GK D KI ++G+ GVGK+ L V + F+ ++ T+ ++ + V I+G Sbjct: 4 MALSPGAGKITD---KIAMLGEGGVGKTSLTVNLTKHVFSETYDPTLEDSYRRQCV-IDG 59 Query: 67 KKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTV-------- 118 L++ DTAGQE + + + R ++V+DVT +F ++ F+ V Sbjct: 60 IPSHLEILDTAGQEEYGALREQWIRQNELFVIVFDVTRRSSFEAAERLFEEVIQTKRKLD 119 Query: 119 -------NEHAND----EAQLLLVGNKSDMETRV-VTADQGEALAKELGIPFIESSAKND 166 + H +D + ++LVGNK D++TR V +G +LAK+LG F+E+SAK Sbjct: 120 ETRRHPGDRHPDDLPFAPSLVVLVGNKCDLDTRREVGTLEGSSLAKKLGCGFVETSAKLG 179 Query: 167 DNVNEIFFTLAK 178 NV E FF++ + Sbjct: 180 TNVEEAFFSVVR 191 >5XOJ-A nrPDB Length = 182 Score = 88.6 bits (218), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 51/172 (29%), Positives = 92/172 (53%), Gaps = 4/172 (2%) Query: 7 VSASSGNGKSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDING 66 +SA + NG+ K++L+GD G GK+ + R + +F +I TIG++ + N Sbjct: 1 MSAPAANGEV--PTFKLVLVGDGGTGKTTFVKRHLTGEFEKKYIATIGVEVHPLSFYTNF 58 Query: 67 KKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEA 126 ++K +WDTAG E+F + YY A I+++DVT T+ N+ W + + + Sbjct: 59 GEIKFDVWDTAGLEKFGGLRDGYYINAQCAIIMFDVTSRITYKNVPNWHRDL-VRVCENI 117 Query: 127 QLLLVGNKSDMETRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAK 178 ++L GNK D++ R V A + ++ + + + SAK++ N + F LA+ Sbjct: 118 PIVLCGNKVDVKERKVKA-KTITFHRKKNLQYYDISAKSNYNFEKPFLWLAR 168 >3OES-A nrPDB Length = 201 Score = 88.2 bits (217), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 55/163 (33%), Positives = 91/163 (55%), Gaps = 6/163 (3%) Query: 22 KILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQER 81 K++++G VGK+ L +FVE +F+ + T+ + K V + + L L DTAGQ+ Sbjct: 26 KVVILGYRCVGKTSLAHQFVEGEFSEGYDPTVENTYS-KIVTLGKDEFHLHLVDTAGQDE 84 Query: 82 FRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNE-HANDEAQLLLVGNKSDMET- 139 + + ++ G G +LVY VT +F I+ ++ ++E H ++LVGNK+D+ Sbjct: 85 YSILPYSFIIGVHGYVLVYSVTSLHSFQVIESLYQKLHEGHGKTRVPVVLVGNKADLSPE 144 Query: 140 RVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQE 182 R V A +G+ LA+ G F+ESSA+ + IF K+IQE Sbjct: 145 REVQAVEGKKLAESWGATFMESSARENQLTQGIF---TKVIQE 184 >2ATV-A nrPDB Length = 196 Score = 87.8 bits (216), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 57/167 (34%), Positives = 97/167 (58%), Gaps = 7/167 (4%) Query: 21 MKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQE 80 +K+ + G +GVGKS L+VRF+ +F + T+ ++ + I+ + V +++ DTAGQE Sbjct: 29 VKLAIFGRAGVGKSALVVRFLTKRFIWEYDPTLESTYRHQAT-IDDEVVSMEILDTAGQE 87 Query: 81 RFRTIT-TAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDE-AQLLLVGNKSDME 138 TI + R G +LVYD+TD +F + ++E + L+LVGNK+D++ Sbjct: 88 --DTIQREGHMRWGEGFVLVYDITDRGSFEEVLPLKNILDEIKKPKNVTLILVGNKADLD 145 Query: 139 -TRVVTADQGEALAKELGIPFIESSA-KNDDNVNEIFFTLAKLIQEK 183 +R V+ ++GE LA EL F E SA + N+ EIF+ L + ++ + Sbjct: 146 HSRQVSTEEGEKLATELACAFYECSACTGEGNITEIFYELCREVRRR 192 >3WYF-A nrPDB Length = 219 Score = 87.8 bits (216), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 51/172 (29%), Positives = 92/172 (53%), Gaps = 4/172 (2%) Query: 7 VSASSGNGKSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDING 66 +SA + NG+ K++L+GD G GK+ + R + +F +I TIG++ + N Sbjct: 1 MSAPAANGEV--PTFKLVLVGDGGTGKTTFVKRHLTGEFEKKYIATIGVEVHPLSFYTNF 58 Query: 67 KKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEA 126 ++K +WDTAG E+F + YY A I+++DVT T+ N+ W + + + Sbjct: 59 GEIKFDVWDTAGLEKFGGLRDGYYINAQCAIIMFDVTSRITYKNVPNWHRDL-VRVCENI 117 Query: 127 QLLLVGNKSDMETRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAK 178 ++L GNK D++ R V A + ++ + + + SAK++ N + F LA+ Sbjct: 118 PIVLCGNKVDVKERKVKA-KTITFHRKKNLQYYDISAKSNYNFEKPFLWLAR 168 >2FV8-A nrPDB Length = 207 Score = 87.8 bits (216), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 52/177 (29%), Positives = 91/177 (51%), Gaps = 17/177 (9%) Query: 22 KILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQER 81 K++++GD GK+CLL+ F +D+F ++ T+ ++ + ++++GK+V+L LWDTAGQE Sbjct: 27 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQED 85 Query: 82 FRTITTAYYRGAMGIILVYDVTDERTFTNIKQ-WFKTVNEHANDEAQLLLVGNKSD---- 136 + + Y I++ + V + NI + W V +H ++LV NK D Sbjct: 86 YDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEV-KHFCPNVPIILVANKKDLRSD 144 Query: 137 ---------METRVVTADQGEALAKEL-GIPFIESSAKNDDNVNEIFFTLAKLIQEK 183 M+ V D G A+A + ++E SAK + V E+F T + +K Sbjct: 145 EHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAALQK 201 >2N1B-A nrPDB Length = 261 Score = 87.4 bits (215), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 46/158 (29%), Positives = 84/158 (53%), Gaps = 2/158 (1%) Query: 21 MKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQE 80 K++L+GD G GK+ + R + +F ++ T+G++ N +K +WDTAGQE Sbjct: 52 FKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQE 111 Query: 81 RFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSDMETR 140 +F + YY A I+++DVT T+ N+ W + + + ++L GNK D++ R Sbjct: 112 KFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDLVR-VCENIPIVLCGNKVDIKDR 170 Query: 141 VVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAK 178 V A + ++ + + + SAK++ N + F LA+ Sbjct: 171 KVKA-KSIVFHRKKNLQYYDISAKSNYNFEKPFLWLAR 207 >5CLL-A nrPDB Length = 191 Score = 87.0 bits (214), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 46/158 (29%), Positives = 84/158 (53%), Gaps = 2/158 (1%) Query: 21 MKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQE 80 K++L+GD G GK+ + R + +F ++ T+G++ N +K +WDTAGQE Sbjct: 11 FKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQE 70 Query: 81 RFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSDMETR 140 +F + YY A I+++DVT T+ N+ W + + + ++L GNK D++ R Sbjct: 71 KFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDLVR-VCENIPIVLCGNKVDIKDR 129 Query: 141 VVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAK 178 V A + ++ + + + SAK++ N + F LA+ Sbjct: 130 KVKA-KSIVFHRKKNLQYYDISAKSNYNFEKPFLWLAR 166 >5UWI-A nrPDB Length = 237 Score = 87.0 bits (214), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 46/158 (29%), Positives = 84/158 (53%), Gaps = 2/158 (1%) Query: 21 MKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQE 80 K++L+GD G GK+ + R + +F ++ T+G++ N +K +WDTAGQE Sbjct: 32 FKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQE 91 Query: 81 RFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSDMETR 140 +F + YY A I+++DVT T+ N+ W + + + ++L GNK D++ R Sbjct: 92 KFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDLVR-VCENIPIVLCGNKVDIKDR 150 Query: 141 VVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAK 178 V A + ++ + + + SAK++ N + F LA+ Sbjct: 151 KVKA-KSIVFHRKKNLQYYDISAKSNYNFEKPFLWLAR 187 >2WBL-C nrPDB Length = 180 Score = 87.0 bits (214), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 52/173 (30%), Positives = 89/173 (51%), Gaps = 15/173 (8%) Query: 20 IMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQ 79 +K + +GD VGK+C+L+ + + F ++ T+ +F V ++G V L LWDTAGQ Sbjct: 6 FIKCVTVGDGAVGKTCMLISYTGNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQ 64 Query: 80 ERFRTITTAYYRGAMGIILVYDVTDERTFTNI-KQWFKTVNEHANDEAQLLLVGNKSDME 138 E + + YRGA +L + + + ++ NI K+W + +A ++LVG K D+ Sbjct: 65 EDYNRLRPLSYRGADVFLLAFSLISKASYENIHKKWLPELKHYAPG-IPIVLVGTKLDLR 123 Query: 139 -----------TRVVTADQGEALAKELG-IPFIESSAKNDDNVNEIFFTLAKL 179 +T QGE L K +G + ++E S+K NV +F T ++ Sbjct: 124 DDKQFLKDHPGAASITTAQGEELRKMIGAVRYLECSSKTQQNVKAVFDTAIRV 176 >5WDR-A nrPDB Length = 171 Score = 87.0 bits (214), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 50/151 (33%), Positives = 82/151 (54%), Gaps = 3/151 (1%) Query: 33 KSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQERFRTITTAYYRG 92 KS L ++ ++ F + TI ++ K V I+ + L + DTAGQE + + Y R Sbjct: 20 KSALTIQLIQQHFVTEYDPTIEDSYR-KHVSIDDEACLLDILDTAGQEDYSAMRDQYMRT 78 Query: 93 AMGIILVYDVTDERTFTNIKQWFKTV-NEHANDEAQLLLVGNKSDMET-RVVTADQGEAL 150 G + VY + +++ I + + + DE ++LVGNK D+E R V+ + G+A+ Sbjct: 79 GEGFLCVYSIDSQQSLDEIHSFREQILRVKDQDEVPMILVGNKCDLEEHREVSTEAGQAV 138 Query: 151 AKELGIPFIESSAKNDDNVNEIFFTLAKLIQ 181 AK IPF+E+SAK NV E F+ L + I+ Sbjct: 139 AKSYSIPFMETSAKKRINVEEAFYQLVREIR 169 >2ERY-A nrPDB Length = 172 Score = 87.0 bits (214), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 50/151 (33%), Positives = 89/151 (58%), Gaps = 3/151 (1%) Query: 33 KSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQERFRTITTAYYRG 92 KS L ++F++ F + TI + + V I+ + +L + DTAGQE F + Y R Sbjct: 18 KSALTIQFIQSYFVTDYDPTIEDSYTKQCV-IDDRAARLDILDTAGQEEFGAMREQYMRT 76 Query: 93 AMGIILVYDVTDERTFTNIKQWFKTV-NEHANDEAQLLLVGNKSDME-TRVVTADQGEAL 150 G +LV+ VTD +F I ++ + + DE ++L+GNK+D++ R VT ++G+ L Sbjct: 77 GEGFLLVFSVTDRGSFEEIYKFQRQILRVKDRDEFPMILIGNKADLDHQRQVTQEEGQQL 136 Query: 151 AKELGIPFIESSAKNDDNVNEIFFTLAKLIQ 181 A++L + ++E+SAK NV++ F L ++I+ Sbjct: 137 ARQLKVTYMEASAKIRMNVDQAFHELVRVIR 167 >2ATX-A nrPDB Length = 194 Score = 86.3 bits (212), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 52/185 (28%), Positives = 94/185 (50%), Gaps = 23/185 (12%) Query: 10 SSGNGKSYDS------IMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVD 63 S G G+S + ++K +++GD VGK+CLL+ + D F ++ T+ D +V Sbjct: 2 SPGAGRSSMAHGPGALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTV-FDHYAVSVT 60 Query: 64 INGKKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIK-QWFKTVNEHA 122 + GK+ L L+DTAGQE + + Y ++ + V + +F N+K +W + E+A Sbjct: 61 VGGKQYLLGLYDTAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYA 120 Query: 123 NDEAQLLLVGNK-------------SDMETRVVTADQGEALAKELG-IPFIESSAKNDDN 168 + LL+G + +DM+ + + +QG+ LAKE+G ++E SA Sbjct: 121 PN-VPFLLIGTQIDLRDDPKTLARLNDMKEKPICVEQGQKLAKEIGACCYVECSALTQKG 179 Query: 169 VNEIF 173 + +F Sbjct: 180 LKTVF 184 >5JCP-B nrPDB Length = 419 Score = 85.9 bits (211), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 53/183 (28%), Positives = 93/183 (50%), Gaps = 16/183 (8%) Query: 6 TVSASSG-NGKSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDI 64 T S S G G S K++++GD GK+CLL+ +D+F ++ T+ ++ + +++ Sbjct: 228 TASNSPGIEGLSAAIRKKLVIVGDGACGKTCLLIVNSKDQFPEVYVPTVFENY-VADIEV 286 Query: 65 NGKKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHAND 124 +GK+V+L LWDTAGQE + + Y I++ + + + NI + + +H Sbjct: 287 DGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCP 346 Query: 125 EAQLLLVGNKSD-------------METRVVTADQGEALAKELG-IPFIESSAKNDDNVN 170 ++LVGNK D M+ V ++G +A +G ++E SAK D V Sbjct: 347 NVPIILVGNKKDLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVR 406 Query: 171 EIF 173 E+F Sbjct: 407 EVF 409 >2ERX-A nrPDB Length = 172 Score = 84.3 bits (207), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 51/161 (31%), Positives = 84/161 (52%), Gaps = 4/161 (2%) Query: 22 KILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQER 81 ++ + G GVGKS L++RFV+ F S+I T+ ++ + + + LQ+ DT G + Sbjct: 5 RVAVFGAGGVGKSSLVLRFVKGTFRESYIPTVEDTYR-QVISCDKSICTLQITDTTGSHQ 63 Query: 82 FRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHAND--EAQLLLVGNKSD-ME 138 F + ILVY +T ++ +K ++ + E D ++LVGNK D Sbjct: 64 FPAMQRLSISKGHAFILVYSITSRQSLEELKPIYEQICEIKGDVESIPIMLVGNKCDESP 123 Query: 139 TRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKL 179 +R V + + EALA+ F+E+SAK + NV E+F L L Sbjct: 124 SREVQSSEAEALARTWKCAFMETSAKLNHNVKELFQELLNL 164 >3TH5-A nrPDB Length = 204 Score = 84.0 bits (206), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 49/168 (29%), Positives = 85/168 (50%), Gaps = 17/168 (10%) Query: 21 MKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQE 80 +K +++GD VGK+CLL+ + + F +I T+ D V ++GK V L LWDTAGQE Sbjct: 31 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTV-FDNYSANVMVDGKPVNLGLWDTAGQE 89 Query: 81 RFRTITTAYYRGAMGIILVYDVTDERTFTNIK-QWFKTVNEHANDEAQLLLVGNKSDM-- 137 + + Y ++ + + +F N++ +W+ V H + ++LVG K D+ Sbjct: 90 DYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCPN-TPIILVGTKLDLRD 148 Query: 138 -----------ETRVVTADQGEALAKELG-IPFIESSAKNDDNVNEIF 173 + +T QG A+AKE+G + ++E SA + +F Sbjct: 149 DKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQRGLKTVF 196 >3REG-A nrPDB Length = 194 Score = 82.0 bits (201), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 53/177 (29%), Positives = 96/177 (54%), Gaps = 8/177 (4%) Query: 1 MSGLRTVSASSGNGKSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIK 60 S + T + NGK +KI+++GD VGK+CLL+ F + + +++ T+ +F Sbjct: 7 FSDMNTGAGKIENGKK---ALKIVVVGDGAVGKTCLLLAFSKGEIPTAYVPTVFENFS-H 62 Query: 61 TVDINGKKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNE 120 + ++ L LWDTAGQE + + Y + ++L + V + +F NI ++ + Sbjct: 63 VMKYKNEEFILHLWDTAGQEEYDRLRPLSYADSDVVLLCFAVNNRTSFDNISTKWEPEIK 122 Query: 121 HANDEAQLLLVGNKSDME---TRVVTADQGEALAKELG-IPFIESSAKNDDNVNEIF 173 H D A+ +LVG K D+ + VT +G+ L ++LG + +IE+S+ +NE+F Sbjct: 123 HYIDTAKTVLVGLKVDLRKDGSDDVTKQEGDDLCQKLGCVAYIEASSVAKIGLNEVF 179 >1GWN-A nrPDB Length = 205 Score = 82.0 bits (201), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 50/173 (28%), Positives = 93/173 (53%), Gaps = 17/173 (9%) Query: 22 KILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQER 81 KI+++GDS GK+ LL F +D F +++ T+ ++ + +I+ ++++L LWDT+G Sbjct: 30 KIVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENYT-ASFEIDTQRIELSLWDTSGSPY 88 Query: 82 FRTITTAYYRGAMGIILVYDVTDERTFTNI-KQWFKTVNEHANDEAQLLLVGNKSDMETR 140 + + Y + +++ +D++ T ++ K+W + E + ++LLVG KSD+ T Sbjct: 89 YDNVRPLSYPDSDAVLICFDISRPETLDSVLKKWKGEIQEFCPN-TKMLLVGCKSDLRTD 147 Query: 141 V-------------VTADQGEALAKELGIP-FIESSAKNDDNVNEIFFTLAKL 179 V V+ DQG +AK++G +IE SA +N F +A L Sbjct: 148 VSTLVELSNHRQTPVSYDQGANMAKQIGAATYIECSALQSENSVRDIFHVATL 200 >1M7B-A nrPDB Length = 184 Score = 82.0 bits (201), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 50/173 (28%), Positives = 93/173 (53%), Gaps = 17/173 (9%) Query: 22 KILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQER 81 KI+++GDS GK+ LL F +D F +++ T+ ++ + +I+ ++++L LWDT+G Sbjct: 9 KIVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENY-TASFEIDTQRIELSLWDTSGSPY 67 Query: 82 FRTITTAYYRGAMGIILVYDVTDERTFTNI-KQWFKTVNEHANDEAQLLLVGNKSDMETR 140 + + Y + +++ +D++ T ++ K+W + E + ++LLVG KSD+ T Sbjct: 68 YDNVRPLSYPDSDAVLICFDISRPETLDSVLKKWKGEIQEFCPN-TKMLLVGCKSDLRTD 126 Query: 141 V-------------VTADQGEALAKELGIP-FIESSAKNDDNVNEIFFTLAKL 179 V V+ DQG +AK++G +IE SA +N F +A L Sbjct: 127 VSTLVELSNHRQTPVSYDQGANMAKQIGAATYIECSALQSENSVRDIFHVATL 179 >2W2X-A nrPDB Length = 185 Score = 80.9 bits (198), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 50/177 (28%), Positives = 84/177 (47%), Gaps = 17/177 (9%) Query: 12 GNGKSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKL 71 G G +K +++GD VGK+CLL+ + + F +I T+ D V ++ K V L Sbjct: 1 GGGSGGSQAIKCVVVGDVAVGKTCLLISYTTNAFPGEYIPTV-FDNYSANVMVDSKPVNL 59 Query: 72 QLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIK-QWFKTVNEHANDEAQLLL 130 LWDTAGQE + + Y ++ + + ++ N++ +WF V H ++L Sbjct: 60 GLWDTAGQEDYDRLRPLSYPQTDVFLICFSLVSPASYENVRAKWFPEVRHHCP-STPIIL 118 Query: 131 VGNKSDM-------------ETRVVTADQGEALAKEL-GIPFIESSAKNDDNVNEIF 173 VG K D+ + +T QG ALAKE+ + ++E SA + +F Sbjct: 119 VGTKLDLRDDKDTIEKLKEKKLAPITYPQGLALAKEIDSVKYLECSALTQRGLKTVF 175 >3RYT-C nrPDB Length = 180 Score = 80.9 bits (198), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 48/168 (28%), Positives = 84/168 (50%), Gaps = 17/168 (10%) Query: 21 MKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQE 80 +K +++GD VGK+CLL+ + + F +I T+ D V ++GK V L LWDTAG E Sbjct: 7 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTV-FDNYSANVMVDGKPVNLGLWDTAGLE 65 Query: 81 RFRTITTAYYRGAMGIILVYDVTDERTFTNIK-QWFKTVNEHANDEAQLLLVGNKSDM-- 137 + + Y ++ + + +F N++ +W+ V H + ++LVG K D+ Sbjct: 66 DYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCPN-TPIILVGTKLDLRD 124 Query: 138 -----------ETRVVTADQGEALAKELG-IPFIESSAKNDDNVNEIF 173 + +T QG A+AKE+G + ++E SA + +F Sbjct: 125 DKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQRGLKTVF 172 >5ZVP-A nrPDB Length = 181 Score = 80.1 bits (196), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 47/167 (28%), Positives = 89/167 (53%), Gaps = 17/167 (10%) Query: 22 KILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQER 81 K++++GD GK+CLL+ + F ++ T+ ++ + V+++GK V+L LWDTAGQE Sbjct: 7 KLVIVGDGACGKTCLLIVNSKGTFPEVYVPTVFENY-VADVEVDGKHVELALWDTAGQED 65 Query: 82 FRTITTAYYRGAMGIILVYDVTDERTFTNIKQ-WFKTVNEHANDEAQLLLVGNKSDME-- 138 + + Y + I++ + + + N+++ W V H ++LVG K D+ Sbjct: 66 YDRLRPLSYPDSHVILICFAIDSPDSLDNVQEKWISEVL-HFCQGLPIILVGCKKDLRHD 124 Query: 139 -----------TRVVTADQGEALAKELG-IPFIESSAKNDDNVNEIF 173 + VT +QGE + K++G ++E SA+ ++ V E+F Sbjct: 125 PKTIEELHKTSQKPVTPEQGEEVRKKIGAYKYLECSARTNEGVREVF 171 >3RAP-R nrPDB Length = 167 Score = 79.3 bits (194), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 51/148 (34%), Positives = 87/148 (58%), Gaps = 3/148 (2%) Query: 33 KSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQERFRTITTAYYRG 92 KS L V+FV F + TI DF K ++++ L++ DTAG E+F ++ Y + Sbjct: 16 KSALTVQFVTGTFIEKYDPTIE-DFYRKEIEVDSSPSVLEILDTAGTEQFASMRDLYIKN 74 Query: 93 AMGIILVYDVTDERTFTNIKQWF-KTVNEHANDEAQLLLVGNKSDM-ETRVVTADQGEAL 150 G ILVY + ++++F +IK + + ++ ++LVGNK D+ R V++ +G AL Sbjct: 75 GQGFILVYSLVNQQSFQDIKPMRDQIIRVKRYEKVPVILVGNKVDLESEREVSSSEGRAL 134 Query: 151 AKELGIPFIESSAKNDDNVNEIFFTLAK 178 A+E G PF+E+SAK+ V+E+F + + Sbjct: 135 AEEWGCPFMETSAKSKTMVDELFAEIVR 162 >3VHL-B nrPDB Length = 195 Score = 78.6 bits (192), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 47/176 (26%), Positives = 87/176 (49%), Gaps = 17/176 (9%) Query: 13 NGKSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQ 72 +G S +K +++GD VGK+CLL+ + +KF ++ T+ ++ + TV I G+ L Sbjct: 3 SGSSGMQTIKCVVVGDGAVGKNCLLISYTTNKFPSEYVPTVFDNYAV-TVMIGGEPYTLG 61 Query: 73 LWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQ-WFKTVNEHANDEAQLLLV 131 L+DTAGQE + + Y ++ + V +F N+K+ W + H + LLV Sbjct: 62 LFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHC-PKTPFLLV 120 Query: 132 GNKSDM-------------ETRVVTADQGEALAKEL-GIPFIESSAKNDDNVNEIF 173 G + D+ + + +T + E LA++L + ++E SA + +F Sbjct: 121 GTQIDLRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVF 176 >2WKQ-A nrPDB Length = 332 Score = 78.6 bits (192), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 47/169 (27%), Positives = 85/169 (50%), Gaps = 17/169 (10%) Query: 20 IMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQ 79 ++K +++GD VGK+CLL+ + + F +I T+ D V ++GK V L LWDTAG Sbjct: 155 LIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTV-FDNYSANVMVDGKPVNLGLWDTAGL 213 Query: 80 ERFRTITTAYYRGAMGIILVYDVTDERTFTNIK-QWFKTVNEHANDEAQLLLVGNKSDM- 137 E + + Y ++ + + +F +++ +W+ V H + ++LVG K D+ Sbjct: 214 EDYDRLRPLSYPQTDVFLICFSLVSPASFHHVRAKWYPEVRHHCPN-TPIILVGTKLDLR 272 Query: 138 ------------ETRVVTADQGEALAKELG-IPFIESSAKNDDNVNEIF 173 + +T QG A+AKE+G + ++E SA + +F Sbjct: 273 DDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQRGLKTVF 321 >2Q3H-A nrPDB Length = 201 Score = 77.8 bits (190), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 49/168 (29%), Positives = 84/168 (50%), Gaps = 17/168 (10%) Query: 21 MKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQE 80 +K +L+GD VGK+ L+V + + + +I T +F V ++G+ V+LQL DTAGQ+ Sbjct: 21 VKCVLVGDGAVGKTSLVVSYTTNGYPTEYIPTAFDNFS-AVVSVDGRPVRLQLCDTAGQD 79 Query: 81 RFRTITTAYYRGAMGIILVYDVTDERTFTNI-KQWFKTVNEHANDEAQLLLVGNKSDMET 139 F + Y +L + V +F N+ ++W + H +A ++LVG +SD+ Sbjct: 80 EFDKLRPLCYTNTDIFLLCFSVVSPSSFQNVSEKWVPEIRCHCP-KAPIILVGTQSDLRE 138 Query: 140 RV-------------VTADQGEALAKEL-GIPFIESSAKNDDNVNEIF 173 V V + + LA+E+ +IE SA N+ E+F Sbjct: 139 DVKVLIELDKCKEKPVPEEAAKLLAEEIKAASYIECSALTQKNLKEVF 186 >1RYH-A nrPDB Length = 203 Score = 77.8 bits (190), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 50/187 (26%), Positives = 87/187 (46%), Gaps = 36/187 (19%) Query: 21 MKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQE 80 +K +++GD VGK+CLL+ + + F +I T+ D V ++GK V L LWDTAGQE Sbjct: 6 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTV-FDNYSANVMVDGKPVNLGLWDTAGQE 64 Query: 81 RFRTITTAYYRGAMG-------------------IILVYDVTDERTFTNIK-QWFKTVNE 120 + + Y +G ++ + + +F N++ +W+ V Sbjct: 65 DYDRLRPLSYPQTVGETYGKDITSRGKDKPIADVFLICFSLVSPASFENVRAKWYPEVRH 124 Query: 121 HANDEAQLLLVGNKSDM-------------ETRVVTADQGEALAKELG-IPFIESSAKND 166 H + ++LVG K D+ + +T QG A+AKE+G + ++E SA Sbjct: 125 HCPN-TPIILVGTKLDLRDDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQ 183 Query: 167 DNVNEIF 173 + +F Sbjct: 184 RGLKTVF 190 >2FN4-A nrPDB Length = 181 Score = 76.6 bits (187), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 46/151 (30%), Positives = 79/151 (52%), Gaps = 3/151 (1%) Query: 33 KSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQERFRTITTAYYRG 92 KS L ++F++ F + TI D K ++G +L + DTAGQE F + Y R Sbjct: 22 KSALTIQFIQSYFVSDYDPTIE-DSYTKICSVDGIPARLDILDTAGQEEFGAMREQYMRA 80 Query: 93 AMGIILVYDVTDERTFTNIKQWF-KTVNEHANDEAQLLLVGNKSDMET-RVVTADQGEAL 150 G +LV+ + D ++F + + F + + D+ ++LVGNK+D+E+ R V + A Sbjct: 81 GHGFLLVFAINDRQSFNEVGKLFTQILRVKDRDDFPVVLVGNKADLESQRQVPRSEASAF 140 Query: 151 AKELGIPFIESSAKNDDNVNEIFFTLAKLIQ 181 + + E+SAK NV+E F L + ++ Sbjct: 141 GASHHVAYFEASAKLRLNVDEAFEQLVRAVR 171 >4MIT-A nrPDB Length = 186 Score = 75.5 bits (184), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 47/168 (27%), Positives = 83/168 (49%), Gaps = 17/168 (10%) Query: 21 MKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQE 80 +K++++GD VGK+CLL+ + KF +I T+ D + ++ ++++L LWDTAG E Sbjct: 11 IKLVVVGDGAVGKTCLLISYSIRKFPEDYIPTV-FDNYVVSLTAGTRQIQLALWDTAGLE 69 Query: 81 RFRTITTAYYRGAMGIILVYDVTDERTFTN-IKQWFKTVNEHANDEAQLLLVGNKSDME- 138 + + Y A ++ + VT ++ N I +W V H + ++LVG K D Sbjct: 70 EYDQLRPLSYSSASIFLICFSVTSSVSYDNVITKWHPEVI-HFAPKVPIILVGTKLDTRN 128 Query: 139 ------------TRVVTADQGEALAKEL-GIPFIESSAKNDDNVNEIF 173 V+ +GE L + + +IE SAK +N+ +F Sbjct: 129 DPAIVKRLTEQGMTVINTAKGEELKNRIKAVKYIECSAKTSENLKTVF 176 >5C1S-A nrPDB Length = 391 Score = 75.1 bits (183), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 50/165 (30%), Positives = 88/165 (53%), Gaps = 14/165 (8%) Query: 4 LRTVSASSGNGKSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVD 63 LRT S G + +++L++G SGVGK+ L F E + G + + K V Sbjct: 51 LRTRSQIIGKKE-----IRLLVVGSSGVGKTTLCDCFFESH------QSQGEETREKHVQ 99 Query: 64 INGKKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIK-QWFKTVNEHA 122 I+ +++ + D AGQ+ F Y G I+++YD+T+ ++FT++K W + + Sbjct: 100 IDNDFIRISISDIAGQQSFYACDNPY-DGYDAILVMYDITELKSFTDLKTMWLPDIFLYC 158 Query: 123 NDEAQLLLVGNKSDMET-RVVTADQGEALAKELGIPFIESSAKND 166 N + Q++++GNK D E R++T + E A++ F E S K+D Sbjct: 159 NIDTQIIIIGNKKDQEIDRIITRKEAEQFAQDRLCQFYEISTKDD 203 Score = 64.7 bits (156), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 45/164 (27%), Positives = 88/164 (53%), Gaps = 9/164 (5%) Query: 21 MKILLIGDSGVGKSCLLVRF-VEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQ 79 +++L++GD VGK+ + +F ++D F+ I F+++ + K ++ + D Sbjct: 223 IRMLMVGDQNVGKTTFIRKFALQDPTGHDFMNAITTRFEMEKI-----KYEIIMIDWGFY 277 Query: 80 ERFRTITTAYYRGAMGIILVYDVTDERTFTNI-KQWFKTVNEHANDEAQLLLVGNKSDME 138 + A R I++VYD+T+E +F NI ++++ +N +D A ++VG K+D+E Sbjct: 278 NKLLQTNPAISRTIEAILIVYDITNEESFQNIHRKYYPLINNKFSDVAG-VIVGYKTDLE 336 Query: 139 T-RVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQ 181 R +T LA LG ++E S+K+ ++ + I LA I+ Sbjct: 337 AQRKITMGDALTLADWLGYKYVEMSSKDTEDHSSIIKALAHSIR 380 >3A58-B nrPDB Length = 188 Score = 74.7 bits (182), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 44/167 (26%), Positives = 89/167 (53%), Gaps = 17/167 (10%) Query: 22 KILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQER 81 K++++GD GK+CLL+ + +F ++ T+ ++ + V+++G++V+L LWDTAGQE Sbjct: 12 KLVIVGDGACGKTCLLIVNSKGQFPEVYVPTVFENY-VADVEVDGRRVELALWDTAGQED 70 Query: 82 FRTITTAYYRGAMGIILVYDVTDERTFTNIKQ-WFKTVNEHANDEAQLLLVGNKSDME-- 138 + + Y + +++ + + + N+++ W V H ++LVG K D+ Sbjct: 71 YDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVL-HFCQGVPIILVGCKVDLRND 129 Query: 139 -----------TRVVTADQGEALAKELGIP-FIESSAKNDDNVNEIF 173 + VT+ +G+++A ++G + E SAK V E+F Sbjct: 130 PQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVF 176 >2GF0-A nrPDB Length = 199 Score = 70.1 bits (170), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 48/167 (28%), Positives = 86/167 (51%), Gaps = 3/167 (1%) Query: 33 KSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQERFRTITTAYYRG 92 KS L++RFV+ F ++I TI ++ + + + LQ+ DT G +F + Sbjct: 21 KSSLVLRFVKGTFRDTYIPTIEDTYR-QVISCDKSVCTLQITDTTGSHQFPAMQRLSISK 79 Query: 93 AMGIILVYDVTDERTFTNIKQWFKTVNE--HANDEAQLLLVGNKSDMETRVVTADQGEAL 150 ILV+ VT +++ + +K + + + ++ ++LVGNK D R V + +A+ Sbjct: 80 GHAFILVFSVTSKQSLEELGPIYKLIVQIKGSVEDIPVMLVGNKCDETQREVDTREAQAV 139 Query: 151 AKELGIPFIESSAKNDDNVNEIFFTLAKLIQEKIDSNKLVGVGNGKE 197 A+E F+E+SAK + NV E+F L L + S + G +GK+ Sbjct: 140 AQEWKCAFMETSAKMNYNVKELFQELLTLETRRNMSLNIDGKRSGKQ 186 >2REX-B nrPDB Length = 197 Score = 69.3 bits (168), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 43/178 (24%), Positives = 95/178 (53%), Gaps = 18/178 (10%) Query: 22 KILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQER 81 K++L+GD GK+ +L +D + +++ T+ ++ ++ ++V+L LWDT+G Sbjct: 12 KLVLVGDVQCGKTAMLQVLAKDCYPETYVPTVFENY-TACLETEEQRVELSLWDTSGSPY 70 Query: 82 FRTITTAYYRGAMGIILVYDVTDERTF-TNIKQWFKTVNEHANDEAQLLLVGNKSDMETR 140 + + Y + ++L +D++ T + +K+W + ++ ++LL+G K+D+ T Sbjct: 71 YDNVRPLCYSDSDAVLLCFDISRPETVDSALKKWRTEILDYCPS-TRVLLIGCKTDLRTD 129 Query: 141 V-------------VTADQGEALAKELGIP-FIESSA-KNDDNVNEIFFTLAKLIQEK 183 + ++ +QG A+AK+LG ++E SA ++ +++ IF T + L K Sbjct: 130 LSTLMELSHQKQAPISYEQGCAIAKQLGAEIYLEGSAFTSEKSIHSIFRTASMLCLNK 187 >2NZJ-A nrPDB Length = 175 Score = 65.1 bits (157), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 45/159 (28%), Positives = 79/159 (49%), Gaps = 5/159 (3%) Query: 19 SIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAG 78 ++ +++L+GD GVGK+ L F K +G D +T+ ++G+ L + DT Sbjct: 3 ALYRVVLLGDPGVGKTSLASLFA-GKQERDLHEQLGEDVYERTLTVDGEDTTLVVVDTWE 61 Query: 79 QERFRTITT--AYYRGAMGIILVYDVTDERTFTNIKQW-FKTVNEHANDEAQLLLVGNKS 135 E+ + + +G ++VY + D +F + + + H D ++LVGNK+ Sbjct: 62 AEKLDKSWSQESCLQGGSAYVIVYSIADRGSFESASELRIQLRRTHQADHVPIILVGNKA 121 Query: 136 DM-ETRVVTADQGEALAKELGIPFIESSAKNDDNVNEIF 173 D+ R V+ ++G A A FIE+SA NV E+F Sbjct: 122 DLARCREVSVEEGRACAVVFDCKFIETSATLQHNVAELF 160 >3Q72-A nrPDB Length = 166 Score = 64.7 bits (156), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 51/167 (30%), Positives = 84/167 (50%), Gaps = 8/167 (4%) Query: 19 SIMKILLIGDSGVGKSCLLVRF--VEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDT 76 S+ K+LL+G GVGKS L F VED P G + +++ ++G++ L ++D Sbjct: 1 SVYKVLLLGAPGVGKSALARIFGGVED--GPE-AEAAGHTYD-RSIVVDGEEASLMVYDI 56 Query: 77 AGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQW-FKTVNEHANDEAQLLLVGNKS 135 Q+ R + ++VY VTD+ +F + + D+ ++LVGNKS Sbjct: 57 WEQDGGRWLPGHCMAMGDAYVIVYSVTDKGSFEKASELRVQLRRARQTDDVPIILVGNKS 116 Query: 136 DM-ETRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQ 181 D+ +R V+ D+G A A FIE+SA NV +F + + I+ Sbjct: 117 DLVRSREVSVDEGRACAVVFDCKFIETSAALHHNVQALFEGVVRQIR 163 >2G3Y-A nrPDB Length = 211 Score = 64.7 bits (156), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 54/195 (27%), Positives = 96/195 (49%), Gaps = 15/195 (7%) Query: 1 MSGLRTVSASSGNGKSYDSIMKILLIGDSGVGKSCLLVRF--VEDKFNPSFITTIGIDFK 58 MS +S+ SGN + +++LIG+ GVGKS L F V D + S +G D Sbjct: 23 MSTDSVISSESGN-----TYYRVVLIGEQGVGKSTLANIFAGVHDSMD-SDCEVLGEDTY 76 Query: 59 IKTVDINGKK---VKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQW- 114 +T+ ++G+ + L +W+ G+ + + + ++VY +TD +F + Sbjct: 77 ERTLMVDGESATIILLDMWENKGENEW--LHDHCMQVGDAYLIVYSITDRASFEKASELR 134 Query: 115 FKTVNEHANDEAQLLLVGNKSDM-ETRVVTADQGEALAKELGIPFIESSAKNDDNVNEIF 173 + ++ ++LVGNKSD+ R V+ +G A A FIE+SA NV E+F Sbjct: 135 IQLRRARQTEDIPIILVGNKSDLVRCREVSVSEGRACAVVFDCKFIETSAAVQHNVKELF 194 Query: 174 FTLAKLIQEKIDSNK 188 + + ++ + DS + Sbjct: 195 EGIVRQVRLRRDSKE 209 >3LVQ-E nrPDB Length = 497 Score = 63.9 bits (154), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 40/133 (30%), Positives = 63/133 (47%), Gaps = 6/133 (4%) Query: 6 TVSASSGNGKSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDIN 65 T S S G + M+IL++G GK+ +L + K S T + F ++TV Sbjct: 308 TASNSPGIEGLSNKEMRILMLGLDAAGKTTILYKL---KLGQSVTTIPTVGFNVETVTY- 363 Query: 66 GKKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQ-WFKTVNEHAND 124 K VK +WD GQ++ R + YY G G+I V D D +Q + +N+ Sbjct: 364 -KNVKFNVWDVGGQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMR 422 Query: 125 EAQLLLVGNKSDM 137 +A +L+ NK D+ Sbjct: 423 DAIILIFANKQDL 435 >2YC4-C nrPDB Length = 208 Score = 63.9 bits (154), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 38/126 (30%), Positives = 66/126 (52%), Gaps = 7/126 (5%) Query: 22 KILLIGDSGVGKSCLLVRFVE--DKFNPSFITTIGIDFKIKTVDINGKKVKLQLW--DTA 77 K+ ++G++ VGKS L+ F KF + T G++ + V I V ++L+ DTA Sbjct: 22 KVAVVGEATVGKSALISMFTSKGSKFLKDYAMTSGVEVVVAPVTIPDTTVSVELFLLDTA 81 Query: 78 GQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLL---LVGNK 134 G + ++ + Y+ G ILV+DV+ +F + K WF+ + D + L LV NK Sbjct: 82 GSDLYKEQISQYWNGVYYAILVFDVSSMESFESCKAWFELLKSARPDRERPLRAVLVANK 141 Query: 135 SDMETR 140 +D+ + Sbjct: 142 TDLPPQ 147 >2A5F-A nrPDB Length = 175 Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 36/119 (30%), Positives = 58/119 (48%), Gaps = 6/119 (5%) Query: 21 MKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQE 80 M+IL++G GK+ +L + K S T + F ++TV K VK +WD GQ+ Sbjct: 14 MRILMLGLDAAGKTTILYKL---KLGQSVTTIPTVGFNVETVTY--KNVKFNVWDVGGQD 68 Query: 81 RFRTITTAYYRGAMGIILVYDVTDERTFTNIKQ-WFKTVNEHANDEAQLLLVGNKSDME 138 + R + YY G G+I V D D +Q + +N+ +A +L+ NK D+ Sbjct: 69 KIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRDAIILIFANKQDLP 127 >5NZV-F nrPDB Length = 181 Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 39/131 (29%), Positives = 61/131 (46%), Gaps = 6/131 (4%) Query: 21 MKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQE 80 M+IL++G G GK+ +L + K T I F ++TV K + +WD GQ+ Sbjct: 18 MRILMVGLDGAGKTTVLYKL---KLGEVITTIPTIGFNVETVQY--KNISFTVWDVGGQD 72 Query: 81 RFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWF-KTVNEHANDEAQLLLVGNKSDMET 139 R R++ YYR G+I V D D ++ + +NE A L+ NK D+ Sbjct: 73 RIRSLWRHYYRNTEGVIFVVDSNDRSRIGEAREVMQRMLNEDELRNAAWLVFANKQDLPE 132 Query: 140 RVVTADQGEAL 150 + A+ E L Sbjct: 133 AMSAAEITEKL 143 >3CBQ-A nrPDB Length = 195 Score = 60.8 bits (146), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 50/170 (29%), Positives = 81/170 (47%), Gaps = 25/170 (14%) Query: 18 DSIMKILLIGDSGVGKSCLLVRF-------VEDKFNP--SFITTIGIDFKIKTVDINGKK 68 D I K++L+G+SGVGKS L F + NP ++ I +D + T+ Sbjct: 21 DGIFKVMLVGESGVGKSTLAGTFGGLQGDSAHEPENPEDTYERRIMVDKEEVTL------ 74 Query: 69 VKLQLW---DTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNE-HAND 124 V +W D G R + T ++V+ VTD R+F+ + + + + Sbjct: 75 VVYDIWEQGDAGGWLRDHCLQTGD-----AFLIVFSVTDRRSFSKVPETLLRLRAGRPHH 129 Query: 125 EAQLLLVGNKSDM-ETRVVTADQGEALAKELGIPFIESSAKNDDNVNEIF 173 + ++LVGNKSD+ +R V+ ++G LA L IE+SA N E+F Sbjct: 130 DLPVILVGNKSDLARSREVSLEEGRHLAGTLSCKHIETSAALHHNTRELF 179 >5VCU-A nrPDB Length = 208 Score = 60.8 bits (146), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 41/167 (24%), Positives = 80/167 (47%), Gaps = 15/167 (8%) Query: 21 MKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQE 80 +K +++GD VGK+ LL+ + F ++ T+ ++ K + V + L+DTAGQE Sbjct: 12 IKCVVVGDGAVGKTALLIAYSSGCFPEDYVPTVFDNYN-KNIPYGDGIVSIALYDTAGQE 70 Query: 81 RFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSDM--- 137 + + Y ++ + + + + N + +H N + ++LVG K D+ Sbjct: 71 DYDRLRPLSYPDTDVFLVCFSLENPNSLENCHSKWAEELKHYNPDTPIVLVGTKLDLKKD 130 Query: 138 --------ETRV--VTADQGEALAKEL-GIPFIESSAKNDDNVNEIF 173 E ++ VT +QG+ + ++ +IE SAK +N+ E F Sbjct: 131 EEYVKKLKEKKISPVTTEQGQEMKDKIKACGYIECSAKTMENLTEAF 177 >2CJW-A nrPDB Length = 192 Score = 60.5 bits (145), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 48/174 (27%), Positives = 87/174 (50%), Gaps = 10/174 (5%) Query: 22 KILLIGDSGVGKSCLLVRF--VEDKFNPSFITTIGIDFKIKTVDINGKK---VKLQLWDT 76 +++LIG+ GVGKS L F V D + S +G D +T+ ++G+ + L +W+ Sbjct: 8 RVVLIGEQGVGKSTLANIFAGVHDSMD-SDCEVLGEDTYERTLMVDGESATIILLDMWEN 66 Query: 77 AGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQW-FKTVNEHANDEAQLLLVGNKS 135 G+ + + + ++VY +TD +F + + ++ ++LVGNKS Sbjct: 67 KGENEW--LHDHCMQVGDAYLIVYSITDRASFEKASELRIQLRRARQTEDIPIILVGNKS 124 Query: 136 DM-ETRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEKIDSNK 188 D+ R V+ +G A A FIE+SA NV E+F + + ++ + DS + Sbjct: 125 DLVRCREVSVSEGRACAVVFDCKFIETSAAVQHNVKELFEGIVRQVRLRRDSKE 178 >6BBQ-A nrPDB Length = 520 Score = 59.3 bits (142), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 37/131 (28%), Positives = 61/131 (46%), Gaps = 6/131 (4%) Query: 21 MKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQE 80 M+IL++G GK+ +L + K S T + F ++TV K VK +WD G + Sbjct: 360 MRILMLGLDAAGKTTILYKL---KLGQSVTTIPTVGFNVETVTY--KNVKFNVWDVGGLD 414 Query: 81 RFRTITTAYYRGAMGIILVYDVTDERTFTNIKQ-WFKTVNEHANDEAQLLLVGNKSDMET 139 + R + YY G G+I V D D +Q + +N+ +A +L+ NK D+ Sbjct: 415 KIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRDAIILIFANKQDLPD 474 Query: 140 RVVTADQGEAL 150 + + E L Sbjct: 475 AMKPHEIQEKL 485 >5UF8-A nrPDB Length = 181 Score = 57.0 bits (136), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 37/131 (28%), Positives = 62/131 (47%), Gaps = 6/131 (4%) Query: 21 MKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQE 80 M+IL++G GK+ +L + K T I F ++TV+ K + +WD GQ+ Sbjct: 18 MRILMVGLDAAGKTTILYKL---KLGEIVTTIPTIGFNVETVEY--KNISFTVWDVGGQD 72 Query: 81 RFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWF-KTVNEHANDEAQLLLVGNKSDMET 139 + R + Y++ GII V D D ++ + +NE +A LL+ NK D+ Sbjct: 73 KIRPLWRYYFQNTQGIIFVVDSNDRDRIAEAREELQQMLNEDELRDALLLVFANKQDLPN 132 Query: 140 RVVTADQGEAL 150 + A+ E L Sbjct: 133 AMNAAEITEKL 143 >4YLG-A nrPDB Length = 173 Score = 57.0 bits (136), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 38/131 (29%), Positives = 62/131 (47%), Gaps = 6/131 (4%) Query: 21 MKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQE 80 M+IL++G GK+ +L + K T I F ++TV+ K + +WD GQ+ Sbjct: 14 MRILMVGLDAAGKTSILYKL---KLGEIVTTIPTIGFNVETVEY--KNISFTVWDVGGQD 68 Query: 81 RFRTITTAYYRGAMGIILVYDVTD-ERTFTNIKQWFKTVNEHANDEAQLLLVGNKSDMET 139 + R + YY+ II V D D +R ++ K +NE A LL+ NK D+ Sbjct: 69 KIRPLWRHYYQNTQAIIFVVDSNDRDRIGEAREELMKMLNEDEMRNAILLVFANKHDLPQ 128 Query: 140 RVVTADQGEAL 150 + ++ E L Sbjct: 129 AMSISEVTEKL 139 >2B6H-A nrPDB Length = 192 Score = 56.6 bits (135), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 40/142 (28%), Positives = 68/142 (47%), Gaps = 10/142 (7%) Query: 21 MKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQE 80 M+IL++G GK+ +L + K T I F ++TV+ K + +WD GQ+ Sbjct: 30 MRILMVGLDAAGKTTILYKL---KLGEIVTTIPTIGFNVETVEY--KNICFTVWDVGGQD 84 Query: 81 RFRTITTAYYRGAMGIILVYDVTD-ERTFTNIKQWFKTVNEHANDEAQLLLVGNKSDMET 139 + R + Y++ G+I V D D ER + + K + E +A LL+ NK DM Sbjct: 85 KIRPLWRHYFQNTQGLIFVVDSNDRERVQESADELQKMLQEDELRDAVLLVFANKQDMPN 144 Query: 140 RVVTADQGEALAKELGIPFIES 161 + ++ L +LG+ + S Sbjct: 145 AMPVSE----LTDKLGLQHLRS 162 >3AQ4-A nrPDB Length = 184 Score = 56.2 bits (134), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 35/126 (27%), Positives = 61/126 (48%), Gaps = 6/126 (4%) Query: 21 MKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQE 80 M+IL++G GK+ +L + K T I F ++TV+ K + +WD GQ+ Sbjct: 21 MRILMVGLDAAGKTTILYKL---KLGEIVTTIPTIGFNVETVEY--KNISFTVWDVGGQD 75 Query: 81 RFRTITTAYYRGAMGIILVYDVTD-ERTFTNIKQWFKTVNEHANDEAQLLLVGNKSDMET 139 + R + Y++ G+I V D D +R + + +NE +A LL+ NK D+ Sbjct: 76 KIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPN 135 Query: 140 RVVTAD 145 + A+ Sbjct: 136 AMNAAE 141 >1MOZ-A nrPDB Length = 183 Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 46/168 (27%), Positives = 76/168 (45%), Gaps = 10/168 (5%) Query: 21 MKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQE 80 ++IL++G G GK+ +L R + T I F ++T ++ K +KL +WD GQ Sbjct: 19 LRILILGLDGAGKTTILYRL---QIGEVVTTKPTIGFNVET--LSYKNLKLNVWDLGGQT 73 Query: 81 RFRTITTAYYRGAMGIILVYDVTD-ERTFTNIKQWFKTVNEHANDEAQLLLVGNKSDMET 139 R YY +I V D TD +R T K+ + E +A LL+ NK D Sbjct: 74 SIRPYWRCYYADTAAVIFVVDSTDKDRMSTASKELHLMLQEEELQDAALLVFANKQDQPG 133 Query: 140 RVVTADQGEAL----AKELGIPFIESSAKNDDNVNEIFFTLAKLIQEK 183 + ++ + L K+ + SSA + + E L +I+E+ Sbjct: 134 ALSASEVSKELNLVELKDRSWSIVASSAIKGEGITEGLDWLIDVIKEE 181 >4ILE-A nrPDB Length = 184 Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 51/176 (28%), Positives = 77/176 (43%), Gaps = 30/176 (17%) Query: 21 MKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQE 80 M++ L+G GK+ + +FN I T+G + + I V ++LWD GQ Sbjct: 23 MELTLVGLQYSGKTTFVNVIASGQFNEDMIPTVGFNMR----KITKGNVTIKLWDIGGQP 78 Query: 81 RFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHAN--DEAQL-----LLVGN 133 RFR++ Y RG I+ + D D+ K NE N D+ QL L++GN Sbjct: 79 RFRSMWERYCRGVSAIVYMVDAADQEKIEASK------NELHNLLDKPQLQGIPVLVLGN 132 Query: 134 KSDMETRVVTADQGEALAK-------ELGIPFIESSAKNDDNVNEIFFTLAKLIQE 182 K D+ + D+ E + K + I S K DN++ TL LIQ Sbjct: 133 KRDLPGAL---DEKELIEKMNLSAIQDREICCYSISCKEKDNID---ITLQWLIQH 182 >5HZH-A nrPDB Length = 332 Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 37/134 (27%), Positives = 62/134 (46%), Gaps = 16/134 (11%) Query: 55 IDFKIKTVDINGKKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIK-Q 113 ID K + GK V L LWDTAG E + + Y ++ + + +F N++ + Sbjct: 189 IDEAAKELGSGGKPVNLGLWDTAGLEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAK 248 Query: 114 WFKTVNEHANDEAQLLLVGNKSDM-------------ETRVVTADQGEALAKELG-IPFI 159 W+ V H + ++LVG K D+ + +T QG A+AKE+G + ++ Sbjct: 249 WYPEVRHHCPN-TPIILVGTKLDLRDDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYL 307 Query: 160 ESSAKNDDNVNEIF 173 E SA + +F Sbjct: 308 ECSALTQRGLKTVF 321 Score = 34.3 bits (77), Expect = 0.046, Method: Compositional matrix adjust. Identities = 12/33 (36%), Positives = 22/33 (66%) Query: 21 MKILLIGDSGVGKSCLLVRFVEDKFNPSFITTI 53 +K +++GD VGK+CLL+ + + F +I T+ Sbjct: 7 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTV 39 >6FAE-B nrPDB Length = 213 Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 36/130 (27%), Positives = 62/130 (47%), Gaps = 6/130 (4%) Query: 17 YDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDT 76 Y M+IL++G GK+ +L + K T I F ++TV+ K + +WD Sbjct: 46 YFQSMRILMVGLDAAGKTTILYKL---KLGEIVTTIPTIGFNVETVEY--KNISFTVWDV 100 Query: 77 AGQERFRTITTAYYRGAMGIILVYDVTD-ERTFTNIKQWFKTVNEHANDEAQLLLVGNKS 135 GQ++ R + Y++ G+I V D D ER ++ + + E +A LL+ NK Sbjct: 101 GGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQ 160 Query: 136 DMETRVVTAD 145 D+ + A+ Sbjct: 161 DLPNAMNAAE 170 >3Q85-A nrPDB Length = 169 Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 42/157 (26%), Positives = 80/157 (50%), Gaps = 3/157 (1%) Query: 20 IMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQ 79 + K++L+G+SGVGKS L F + + + D + + ++ ++V L ++D Q Sbjct: 2 VFKVMLVGESGVGKSTLAGTFGGLQGDHAHEMENSEDTYERRIMVDKEEVTLIVYDIWEQ 61 Query: 80 -ERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNE-HANDEAQLLLVGNKSDM 137 + + + ++V+ VTD R+F+ + + + + + ++LVGNKSD+ Sbjct: 62 GDAGGWLQDHCLQTGDAFLIVFSVTDRRSFSKVPETLLRLRAGRPHHDLPVILVGNKSDL 121 Query: 138 -ETRVVTADQGEALAKELGIPFIESSAKNDDNVNEIF 173 +R V+ ++G LA L IE+SA N E+F Sbjct: 122 ARSREVSLEEGRHLAGTLSCKHIETSAALHHNTRELF 158 >3O47-A nrPDB Length = 329 Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 35/126 (27%), Positives = 61/126 (48%), Gaps = 6/126 (4%) Query: 21 MKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQE 80 M+IL++G GK+ +L + K T I F ++TV+ K + +WD GQ+ Sbjct: 166 MRILMVGLDAAGKTTILYKL---KLGEIVTTIPTIGFNVETVEY--KNISFTVWDVGGQD 220 Query: 81 RFRTITTAYYRGAMGIILVYDVTD-ERTFTNIKQWFKTVNEHANDEAQLLLVGNKSDMET 139 + R + Y++ G+I V D D ER ++ + + E +A LL+ NK D+ Sbjct: 221 KIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPN 280 Query: 140 RVVTAD 145 + A+ Sbjct: 281 AMNAAE 286 >3LRP-A nrPDB Length = 181 Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 36/131 (27%), Positives = 63/131 (48%), Gaps = 6/131 (4%) Query: 21 MKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQE 80 ++IL++G GK+ +L + K T I F ++TV+ + + +WD GQ+ Sbjct: 18 VRILMVGLDAAGKTTILYKV---KLGEVVTTIPTIGFNVETVEF--RNISFTVWDVGGQD 72 Query: 81 RFRTITTAYYRGAMGIILVYDVTD-ERTFTNIKQWFKTVNEHANDEAQLLLVGNKSDMET 139 + R + YY G+I V D D ER ++ + +NE +A +L+ NK D+ Sbjct: 73 KIRPLWRHYYSNTDGLIFVVDSNDRERIDDAREELHRMINEEELKDAIILVFANKQDLPN 132 Query: 140 RVVTADQGEAL 150 + A+ E L Sbjct: 133 AMSAAEVTEKL 143 >5EE5-B nrPDB Length = 171 Score = 53.9 bits (128), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 42/141 (29%), Positives = 69/141 (48%), Gaps = 10/141 (7%) Query: 21 MKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQE 80 M+IL++G G GK+ +L R + + I TIG F ++TV K +K Q+WD G Sbjct: 8 MRILILGLDGAGKTTILYRLQVGEVVTT-IPTIG--FNVETV--TYKNLKFQVWDLGGLT 62 Query: 81 RFRTITTAYYRGAMGIILVYDVTD-ERTFTNIKQWFKTVNEHANDEAQLLLVGNKSDMET 139 R YY +I V D D +R + + + E +A L++ NK DME Sbjct: 63 SIRPYWRCYYSNTDAVIYVVDSCDRDRIGISKSELVAMLEEEELRKAILVVFANKQDMEQ 122 Query: 140 RVVTADQGEALAKELGIPFIE 160 + +++ +A LG+P ++ Sbjct: 123 AMTSSE----MANSLGLPALK 139 >3C5C-A nrPDB Length = 187 Score = 53.9 bits (128), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 50/160 (31%), Positives = 80/160 (50%), Gaps = 15/160 (9%) Query: 23 ILLIGDSGVGKSCLLVRFVEDKF----NPSFITTIGIDFKIKTVDINGKKVKLQLWDTAG 78 + ++G G GKS L V+F+ +F +P+ T + +TVD + V L++ DTA Sbjct: 24 LAILGRRGAGKSALTVKFLTKRFISEYDPNLEDTYSSE---ETVD--HQPVHLRVMDTAD 78 Query: 79 QERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQ---LLLVGNKS 135 + R Y A ++VY V ++F + + + + HA + + LL+GNK Sbjct: 79 LDTPRNCER-YLNWAHAFLVVYSVDSRQSFDSSSSYLELLALHAKETQRSIPALLLGNKL 137 Query: 136 DM-ETRVVTADQGEALAKELGIPFIESSAKND-DNVNEIF 173 DM + R VT +G ALA G F E SA D ++V +F Sbjct: 138 DMAQYRQVTKAEGVALAGRFGCLFFEVSACLDFEHVQHVF 177 >6DFF-C nrPDB Length = 193 Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 35/128 (27%), Positives = 61/128 (47%), Gaps = 6/128 (4%) Query: 19 SIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAG 78 S M+IL++G GK+ +L + K T I F ++TV+ K + +WD G Sbjct: 28 SEMRILMVGLDAAGKTTILYKL---KLGEIVTTIPTIGFNVETVEY--KNISFTVWDVGG 82 Query: 79 QERFRTITTAYYRGAMGIILVYDVTD-ERTFTNIKQWFKTVNEHANDEAQLLLVGNKSDM 137 ++ R + Y++ G+I V D D ER ++ + + E +A LL+ NK D+ Sbjct: 83 LDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDL 142 Query: 138 ETRVVTAD 145 + A+ Sbjct: 143 PNAMNAAE 150 >1J2J-A nrPDB Length = 166 Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 34/126 (26%), Positives = 60/126 (47%), Gaps = 6/126 (4%) Query: 21 MKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQE 80 M+IL++G GK+ +L + K T I F ++TV+ K + +WD G + Sbjct: 3 MRILMVGLDAAGKTTILYKL---KLGEIVTTIPTIGFNVETVEY--KNISFTVWDVGGLD 57 Query: 81 RFRTITTAYYRGAMGIILVYDVTD-ERTFTNIKQWFKTVNEHANDEAQLLLVGNKSDMET 139 + R + Y++ G+I V D D ER ++ + + E +A LL+ NK D+ Sbjct: 58 KIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPN 117 Query: 140 RVVTAD 145 + A+ Sbjct: 118 AMNAAE 123 >1Z6X-A nrPDB Length = 180 Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 37/133 (27%), Positives = 61/133 (45%), Gaps = 10/133 (7%) Query: 21 MKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQE 80 M+IL++G GK+ +L + K T I F ++TV+ K + +WD GQ+ Sbjct: 18 MRILMVGLDAAGKTTILYKL---KLGEIVTTIPTIGFNVETVEY--KNICFTVWDVGGQD 72 Query: 81 RFRTITTAYYRGAMGIILVYDVTDERTFTNIK---QWFKTVNEHANDEAQLLLVGNKSDM 137 R R + Y++ G+I V D D + Q V+E +A LLL NK D+ Sbjct: 73 RIRPLWKHYFQNTQGLIFVVDSNDRERIQEVADELQKMLLVDELR--DAVLLLFANKQDL 130 Query: 138 ETRVVTADQGEAL 150 + ++ + L Sbjct: 131 PNAMAISEMTDKL 143 >2AL7-A nrPDB Length = 186 Score = 50.8 bits (120), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 46/177 (25%), Positives = 77/177 (43%), Gaps = 32/177 (18%) Query: 21 MKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQE 80 M++ L+G GK+ + +F+ I T+G + + + V +++WD GQ Sbjct: 23 MELTLVGLQYSGKTTFVNVIASGQFSEDMIPTVGFNMR----KVTKGNVTIKIWDIGGQP 78 Query: 81 RFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHAN--DEAQL-----LLVGN 133 RFR++ Y RG I+ + D D + NE N D+ QL L++GN Sbjct: 79 RFRSMWERYCRGVNAIVYMIDAADREKIE------ASRNELHNLLDKPQLQGIPVLVLGN 132 Query: 134 KSDMETRVVTADQGEALAKELGIPFIES--------SAKNDDNVNEIFFTLAKLIQE 182 K D+ A + L +++ + I+ S K DN++ TL LIQ Sbjct: 133 KRDLP----NALDEKQLIEKMNLSAIQDREICCYSISCKEKDNID---ITLQWLIQH 182 >1KSG-A nrPDB Length = 186 Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 36/126 (28%), Positives = 62/126 (49%), Gaps = 10/126 (7%) Query: 15 KSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIG--IDFKIKTVDINGKKVKLQ 72 K + +++L++G GK+ +L KFN + TI + F IKT++ G KL Sbjct: 13 KQKERELRLLMLGLDNAGKTTIL-----KKFNGEDVDTISPTLGFNIKTLEHRG--FKLN 65 Query: 73 LWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKT-VNEHANDEAQLLLV 131 +WD GQ+ R+ Y+ G+I V D D + + ++ ++ + E A LL+ Sbjct: 66 IWDVGGQKSLRSYWRNYFESTDGLIWVVDSADRQRMQDCQRELQSLLVEERLAGATLLIF 125 Query: 132 GNKSDM 137 NK D+ Sbjct: 126 ANKQDL 131 >2H16-A nrPDB Length = 183 Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 35/130 (26%), Positives = 62/130 (47%), Gaps = 6/130 (4%) Query: 22 KILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQER 81 K++++G GK+ +L +F N T+ I ++ + IN + +WD GQE Sbjct: 24 KVIIVGLDNAGKTTILYQF---SMNEVVHTSPTIGSNVEEIVINN--TRFLMWDIGGQES 78 Query: 82 FRTITTAYYRGAMGIILVYDVTD-ERTFTNIKQWFKTVNEHANDEAQLLLVGNKSDMETR 140 R+ YY +I+V D TD ER ++ +K + +A LL+ NK D++ Sbjct: 79 LRSSWNTYYTNTEFVIVVVDSTDRERISVTREELYKMLAHEDLRKAGLLIFANKQDVKEC 138 Query: 141 VVTADQGEAL 150 + A+ + L Sbjct: 139 MTVAEISQFL 148 >3D6T-B nrPDB Length = 171 Score = 47.4 bits (111), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 33/123 (26%), Positives = 64/123 (52%), Gaps = 7/123 (5%) Query: 21 MKILLIGDSGVGKSCLLVRFVEDKFNPSFI--TTIGIDFKIKTVDINGKKVK---LQLWD 75 MK++++G++G GK+ LL + ++ K + + T+GID K + I K+ + L +WD Sbjct: 1 MKLMIVGNTGSGKTTLLQQLMKTKKSDLGMQSATVGIDVKDWPIQIRDKRKRDLVLNVWD 60 Query: 76 TAGQERFRTITTAYYRGAMGIILVYDVTD-ERTFTNIKQWFKTVNEHANDEAQLLLVGNK 134 AG+E F + + + VYD++ + +K W + A+ + ++LVG Sbjct: 61 FAGREEFYSTHPHFMTQRALYLAVYDLSKGQAEVDAMKPWLFNIKARAS-SSPVILVGTH 119 Query: 135 SDM 137 D+ Sbjct: 120 LDV 122 >1YZG-A nrPDB Length = 179 Score = 47.0 bits (110), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 35/130 (26%), Positives = 63/130 (48%), Gaps = 6/130 (4%) Query: 22 KILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQER 81 K++++G GK+ +L +F+ ++ + TIG + + +I K +WD GQE Sbjct: 18 KVIIVGLDNAGKTTILYQFLMNEVVHTS-PTIGSNVE----EIVVKNTHFLMWDIGGQES 72 Query: 82 FRTITTAYYRGAMGIILVYDVTD-ERTFTNIKQWFKTVNEHANDEAQLLLVGNKSDMETR 140 R+ YY IILV D D ER ++ ++ + +A +L+ NK DM+ Sbjct: 73 LRSSWNTYYSNTEFIILVVDSIDRERLAITKEELYRMLAHEDLRKAAVLIFANKQDMKGC 132 Query: 141 VVTADQGEAL 150 + A+ + L Sbjct: 133 MTAAEISKYL 142 >4ZI3-A nrPDB Length = 190 Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 39/134 (29%), Positives = 58/134 (43%), Gaps = 6/134 (4%) Query: 18 DSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTA 77 D ++ILL+G GK+ LL + + S IT F IK+V G KL +WD Sbjct: 15 DQEVRILLLGLDNAGKTTLLKQLASEDI--SHITPTQ-GFNIKSVQSQG--FKLNVWDIG 69 Query: 78 GQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEA-QLLLVGNKSD 136 GQ + R +Y+ +I V D D + F Q + E +L+ NK D Sbjct: 70 GQRKIRPYWRSYFENTDILIYVIDSADRKRFEETGQELTELLEEEKLSCVPVLIFANKQD 129 Query: 137 METRVVTADQGEAL 150 + T ++ E L Sbjct: 130 LLTAAPASEIAEGL 143 >4WNR-A nrPDB Length = 349 Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 33/116 (28%), Positives = 55/116 (47%), Gaps = 4/116 (3%) Query: 21 MKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQE 80 +K+LL+GD GK+ LL R + + F+ + T GI+ K K++K+ WD GQE Sbjct: 42 VKVLLVGDGEAGKTSLLKRLLGEGFDGNEHQTQGINIKKWGFKDKDKEIKVNFWDFGGQE 101 Query: 81 RFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSD 136 T ++ + ++ V D R + W K + D + +L+ NK D Sbjct: 102 IMHA-THQFFLSKRSLYIL--VLDSRRDEKAEYWLKHIRSFGGD-SPVLVALNKID 153 >3DPU-A nrPDB Length = 535 Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 38/138 (27%), Positives = 64/138 (46%), Gaps = 14/138 (10%) Query: 8 SASSGNGKSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTV-DING 66 + S G + +K+ LIGD GK+ LL + + + F+P T G++ K +I G Sbjct: 29 ARSKGEALVHLQEIKVHLIGDGMAGKTSLLKQLIGETFDPKESQTHGLNVVTKQAPNIKG 88 Query: 67 -------KKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYD-VTDERTFTNIKQWFKTV 118 K+ WD GQE I A ++ M VY + D RT +N W + + Sbjct: 89 LENDDELKECLFHFWDFGGQE----IMHASHQFFMTRSSVYMLLLDSRTDSNKHYWLRHI 144 Query: 119 NEHANDEAQLLLVGNKSD 136 ++ ++ +++V NK D Sbjct: 145 EKYGG-KSPVIVVMNKID 161 >3BH6-A nrPDB Length = 164 Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 38/133 (28%), Positives = 57/133 (42%), Gaps = 6/133 (4%) Query: 19 SIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAG 78 S ++ILL+G GK+ LL + + S IT F IK+V G KL +WD G Sbjct: 3 SEVRILLLGLDNAGKTTLLKQLASEDI--SHITPTQ-GFNIKSVQSQG--FKLNVWDIGG 57 Query: 79 QERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEA-QLLLVGNKSDM 137 + R +Y+ +I V D D + F Q + E +L+ NK D+ Sbjct: 58 LRKIRPYWRSYFENTDILIYVIDSADRKRFEETGQELTELLEEEKLSCVPVLIFANKQDL 117 Query: 138 ETRVVTADQGEAL 150 T ++ E L Sbjct: 118 LTAAPASEIAEGL 130 >6HLU-A nrPDB Length = 974 Score = 41.6 bits (96), Expect = 2e-04, Method: Composition-based stats. Identities = 48/174 (27%), Positives = 78/174 (44%), Gaps = 23/174 (13%) Query: 21 MKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTV-DING-------KKVKLQ 72 +K+ LIGD GK+ LL + + + F+P T G++ K +I G K+ Sbjct: 481 IKVHLIGDGMAGKTSLLKQLIGETFDPKESQTHGLNVVTKQAPNIKGLENDDELKECLFH 540 Query: 73 LWDTAGQERFRTITTAYYRGAMGIILVYD-VTDERTFTNIKQWFKTVNEHANDEAQLLLV 131 WD GQE I A ++ M VY + D RT +N W + + ++ ++ +++V Sbjct: 541 FWDFGGQE----IMHASHQFFMTRSSVYMLLLDSRTDSNKHYWLRHIEKYGG-KSPVIVV 595 Query: 132 GNKSDMETRVVTADQGEALAKELGIPFIES-----SAKNDDNVNEIFFTLAKLI 180 NK D E +Q + + P IE+ S KN D V I +L + Sbjct: 596 MNKID-ENPSYNIEQKKINER---FPAIENRFHRISCKNGDGVESIAKSLKSAV 645 >4V0N-A nrPDB Length = 169 Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 27/129 (20%), Positives = 56/129 (43%), Gaps = 4/129 (3%) Query: 23 ILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQERF 82 +L++G GK+ ++ R K P + ++ + ++D +G R+ Sbjct: 9 VLVVGLDNSGKTTIIERL---KPRPRQAAEVAPTVGFTVDEVEKGPLTFTVFDMSGAGRY 65 Query: 83 RTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHAN-DEAQLLLVGNKSDMETRV 141 RT+ YYR A ++ V D D+ + + + +H+N + +L NK D+ + Sbjct: 66 RTLWEQYYREADAVVFVVDSADKLRMVVARDEMEHMLKHSNMRKVPILYFANKKDLPVAM 125 Query: 142 VTADQGEAL 150 + +AL Sbjct: 126 PPVEIAQAL 134 >2X77-A nrPDB Length = 189 Score = 40.4 bits (93), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 39/175 (22%), Positives = 77/175 (44%), Gaps = 18/175 (10%) Query: 18 DSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTA 77 D +++L++G GK+ +L R T + ++T+ K + ++WD Sbjct: 20 DRKIRVLMLGLDNAGKTSILYRL---HLGDVVTTVPTVGVNLETLQY--KNISFEVWDLG 74 Query: 78 GQERFRTITTAYYRGAMGIILVYDVTD-ERTFTNIKQWFKTVNEHANDEAQLLLVGNKSD 136 GQ R Y+ +I V D TD +R + + ++E ++ LL+ NK D Sbjct: 75 GQTGVRPYWRCYFSDTDAVIYVVDSTDRDRMGVAKHELYALLDEDELRKSLLLIFANKQD 134 Query: 137 METRVVTADQGEALAKELGIP--------FIESSAKNDDNVNEIFFTLAKLIQEK 183 + A+ +A++LG+ ++SS+K D + E L + ++E+ Sbjct: 135 LPDAASEAE----IAEQLGVSSIMNRTWTIVKSSSKTGDGLVEGMDWLVERLREQ 185 >2H57-A nrPDB Length = 190 Score = 40.0 bits (92), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 34/142 (23%), Positives = 60/142 (42%), Gaps = 18/142 (12%) Query: 21 MKILLIGDSGVGKSCLLVRFVEDKFNPS------FITTIGIDFKIKTVDINGKKVKLQLW 74 + +L +G GK+ ++ +K PS + TIG F I+ + ++ Sbjct: 22 VHVLCLGLDNSGKTTII-----NKLKPSNAQSQNILPTIG--FSIEK--FKSSSLSFTVF 72 Query: 75 DTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQ---LLLV 131 D +GQ R+R + YY+ II V D +D K+ T+ H + + + +L Sbjct: 73 DMSGQGRYRNLWEHYYKEGQAIIFVIDSSDRLRMVVAKEELDTLLNHPDIKHRRIPILFF 132 Query: 132 GNKSDMETRVVTADQGEALAKE 153 NK D+ V + + L E Sbjct: 133 ANKMDLRDAVTSVKVSQLLCLE 154 >5DE3-A nrPDB Length = 169 Score = 37.0 bits (84), Expect = 0.007, Method: Compositional matrix adjust. Identities = 32/119 (26%), Positives = 54/119 (45%), Gaps = 10/119 (8%) Query: 22 KILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGID--FKIKTVDINGKKVKLQLWDTAGQ 79 +IL++G GK+ +L E+ ITTI F IK++ +G L++WD GQ Sbjct: 2 RILVLGLDNAGKTTILKALSEED-----ITTITPTQGFNIKSLSRDG--FNLKIWDIGGQ 54 Query: 80 ERFRTITTAYYRGAMGIILVYDVTDERTFTNIK-QWFKTVNEHANDEAQLLLVGNKSDM 137 + R Y+ +I V D D + + + + + + E LL+ NK D+ Sbjct: 55 KSIRPYWRNYFDQTDALIYVIDSADSKRLSESEFELTELLQEEKMTGVPLLVFANKQDL 113 >4C0K-A nrPDB Length = 423 Score = 36.2 bits (82), Expect = 0.010, Method: Compositional matrix adjust. Identities = 38/139 (27%), Positives = 63/139 (45%), Gaps = 27/139 (19%) Query: 15 KSYDSIMKILLIGDSGVGKSCLLVRF-VEDKFNPSFITTIGIDFKIKTVD-INGKKVKLQ 72 +S S+ K +IG G GK+ + F VED IG +FK V+ IN +V Sbjct: 241 QSSRSVYKCHVIGPKGSGKTGMCRGFLVEDMHK-----LIGKEFKTNVVNCINSVQV--- 292 Query: 73 LWDTAGQERFRTITTAYYRGAMGII-----------LVYDVTDERTFTNIKQWFKTVNEH 121 GQE+ + R A+ + LVYD ++ R+F + + + + + Sbjct: 293 ----YGQEKHLILRDIDVRHALDPLQPQEVNCDVACLVYDSSNPRSFEYVARIY--IKYY 346 Query: 122 ANDEAQLLLVGNKSDMETR 140 A + +++VG K DM+ R Sbjct: 347 AESKIPVMIVGTKCDMDER 365 >4KV9-A nrPDB Length = 412 Score = 33.9 bits (76), Expect = 0.056, Method: Compositional matrix adjust. Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 4/63 (6%) Query: 20 IMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGK----KVKLQLWD 75 + IL +G++G+GKS LL KF+ S T D K+K V + K K+KL + + Sbjct: 41 VFNILCVGETGIGKSTLLETLFNQKFDFSPSTHDLTDPKLKAVTYDLKEANVKLKLTVVE 100 Query: 76 TAG 78 T G Sbjct: 101 TCG 103 >2QAG-B nrPDB Length = 427 Score = 33.9 bits (76), Expect = 0.057, Method: Compositional matrix adjust. Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 2/53 (3%) Query: 23 ILLIGDSGVGKSCLLVRFVEDKF--NPSFITTIGIDFKIKTVDINGKKVKLQL 73 IL +G++G+GKS L+ KF P+ T G+ + T D+ V+L+L Sbjct: 45 ILCVGETGLGKSTLMDTLFNTKFEGEPATHTQPGVQLQSNTYDLQESNVRLKL 97 >2WL3-A nrPDB Length = 305 Score = 33.5 bits (75), Expect = 0.065, Method: Compositional matrix adjust. Identities = 27/94 (28%), Positives = 41/94 (43%), Gaps = 11/94 (11%) Query: 89 YYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSDMETRVVTADQGE 148 Y G MG+ +V D D+R + + +W + HA+ L +G RV + + Sbjct: 23 YAAGIMGMQVVDDGEDDRIYLRMDRWHHRIVLHADGSDDLAYIG------WRVAGPVELD 76 Query: 149 ALAKEL---GIPFIESSAKNDDNVNEIFFTLAKL 179 LA++L GIPF A + D L KL Sbjct: 77 ELAEQLKNAGIPF--EVASDADAAERRVLGLVKL 108 >6IAE-A nrPDB Length = 223 Score = 33.1 bits (74), Expect = 0.10, Method: Compositional matrix adjust. Identities = 44/196 (22%), Positives = 78/196 (39%), Gaps = 27/196 (13%) Query: 12 GNGKSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPS-------FITTIGIDFKIKTVDI 64 G D ++KIL++G S GKS + + P+ + + ++ + Sbjct: 1 GAASMSDDLVKILVLGPSKSGKSTVTNFLAGTRDTPTKEYHETNPLRVLEVEIALDDTRR 60 Query: 65 NG------KKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFK-- 116 +G KK +QLWD G + + A A GII V++ + + + W+K Sbjct: 61 SGRQAAGLKKAVVQLWDVGGSSKHQAGWPAIASNADGIIYVFNPEVKGSEKELLLWYKNF 120 Query: 117 TVNEHAND----------EAQLLLVGNKSDMETRVVTADQGEALAKEL-GIPFIESSAK- 164 +N+ D + L+ + S + V + + K+L GI +E+S Sbjct: 121 ALNQDELDDDNNFKMRVTDGHSLIFSHHSSLPEFAVGDNAIPPMPKQLQGIRALETSLDY 180 Query: 165 NDDNVNEIFFTLAKLI 180 DN E F L + I Sbjct: 181 QSDNFKEAFDALVEQI 196 >3K53-A nrPDB Length = 271 Score = 32.3 bits (72), Expect = 0.15, Method: Compositional matrix adjust. Identities = 22/93 (23%), Positives = 47/93 (50%), Gaps = 2/93 (2%) Query: 98 LVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSDMETRVVTADQGEALAKELGIP 157 ++ D+ D ++ F T+ + ++LV NK D+ + + + KELG+P Sbjct: 84 VIVDIVDSTCL--MRNLFLTLELFEMEVKNIILVLNKFDLLKKKGAKIDIKKMRKELGVP 141 Query: 158 FIESSAKNDDNVNEIFFTLAKLIQEKIDSNKLV 190 I ++AK + V E+ +A + + K+ +N ++ Sbjct: 142 VIPTNAKKGEGVEELKRMIALMAEGKVTTNPII 174 >6CES-A nrPDB Length = 313 Score = 30.8 bits (68), Expect = 0.46, Method: Compositional matrix adjust. Identities = 37/148 (25%), Positives = 65/148 (43%), Gaps = 29/148 (19%) Query: 22 KILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKI--KTVDINGKKVK------LQL 73 K+LL+G SG GK+ + + F I D + T+D+ V+ L L Sbjct: 9 KVLLMGKSGSGKTSMR--------SIIFANYIARDTRRLGATIDVEHSHVRFLGNLVLNL 60 Query: 74 WDTAGQERFRT--ITTA---YYRGAMGIILVYDVTDERTFTNIKQWFKTVNE---HANDE 125 WD GQ+ F T+ +R +I V+DV + R ++++ E + + Sbjct: 61 WDCGGQDTFMENYFTSQRDNIFRNVEVLIYVFDV-ESRELEKDMHYYQSCLEAILQNSPD 119 Query: 126 AQLLLVGNKSDMETRVVTADQGEALAKE 153 A++ + +K D+ V DQ + + KE Sbjct: 120 AKIFCLVHKMDL----VQEDQRDLIFKE 143 >4BAS-A nrPDB Length = 199 Score = 30.4 bits (67), Expect = 0.52, Method: Compositional matrix adjust. Identities = 24/124 (19%), Positives = 54/124 (43%), Gaps = 11/124 (8%) Query: 21 MKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQE 80 +++++ G GK+ ++ + + + IT + + ++T + +V ++D G + Sbjct: 18 LQVVMCGLDNSGKTTIINQVKPAQSSSKHITAT-VGYNVETFEKG--RVAFTVFDMGGAK 74 Query: 81 RFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQL--------LLVG 132 +FR + YY +I V D +D +K + + +H + +L L Sbjct: 75 KFRGLWETYYDNIDAVIFVVDSSDHLRLCVVKSEIQAMLKHEDIRRELPGGGRVPFLFFA 134 Query: 133 NKSD 136 NK D Sbjct: 135 NKMD 138 >3T1O-A nrPDB Length = 198 Score = 30.0 bits (66), Expect = 0.75, Method: Compositional matrix adjust. Identities = 28/139 (20%), Positives = 56/139 (40%), Gaps = 6/139 (4%) Query: 52 TIGIDF-KIKTVDINGKKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTN 110 T+ DF + ++ G K + L+ GQ + RG GI+ V D R N Sbjct: 56 TLFFDFLPLDIGEVKGFKTRFHLYTVPGQVFYNASRKLILRGVDGIVFVADSAPNRLRAN 115 Query: 111 ---IKQWFKTVNEHA--NDEAQLLLVGNKSDMETRVVTADQGEALAKELGIPFIESSAKN 165 ++ + + E+ D+ +++ NK D+ + + E P +E+ A Sbjct: 116 AESMRNMRENLAEYGLTLDDVPIVIQVNKRDLPDALPVEMVRAVVDPEGKFPVLEAVATE 175 Query: 166 DDNVNEIFFTLAKLIQEKI 184 V E +++L+ ++ Sbjct: 176 GKGVFETLKEVSRLVLARV 194 >6HZK-A nrPDB Length = 333 Score = 29.3 bits (64), Expect = 1.3, Method: Compositional matrix adjust. Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 2/51 (3%) Query: 18 DSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKK 68 D ++ I + GDSG GKS L R D F +T I +D ++D G+K Sbjct: 5 DRVVLIGVAGDSGCGKSTFLNRLA-DLFGTELMTVICLD-DYHSLDRKGRK 53 >1HEY-A nrPDB Length = 128 Score = 29.3 bits (64), Expect = 1.3, Method: Compositional matrix adjust. Identities = 25/94 (26%), Positives = 38/94 (40%), Gaps = 1/94 (1%) Query: 18 DSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTA 77 D +K L++G+ G GKS + E FN G+D + + G + W+ Sbjct: 2 DKELKFLVVGNGGTGKSTVRNLLKELGFNNVEDAEDGVD-ALNKLQAGGYGFVISDWNMP 60 Query: 78 GQERFRTITTAYYRGAMGIILVYDVTDERTFTNI 111 + + T GAM + V VT E NI Sbjct: 61 NMDGLELLKTIRADGAMSALPVLMVTAEAKKENI 94 >4O0M-A nrPDB Length = 524 Score = 29.3 bits (64), Expect = 1.4, Method: Compositional matrix adjust. Identities = 17/41 (41%), Positives = 25/41 (60%), Gaps = 2/41 (4%) Query: 2 SGLRTVSASSGNGKSYDSIMKILLIGDSGVGKSCLLVRFVE 42 SG++T+ G G DSI IL G +G GK+ L+ +F+E Sbjct: 265 SGVKTLDEMCGGGFFKDSI--ILATGATGTGKTLLVSKFLE 303 >4Z8X-A nrPDB Length = 497 Score = 29.3 bits (64), Expect = 1.5, Method: Compositional matrix adjust. Identities = 19/55 (34%), Positives = 32/55 (58%), Gaps = 2/55 (3%) Query: 23 ILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTA 77 +LL G+ GVGK+ LL + + + + FI+ G DF V + +V+ L++TA Sbjct: 54 VLLYGEPGVGKT-LLAKAIAGEAHVPFISVSGSDFVEMFVGVGAARVR-DLFETA 106 >2IWR-A nrPDB Length = 178 Score = 29.3 bits (64), Expect = 1.5, Method: Compositional matrix adjust. Identities = 38/166 (22%), Positives = 74/166 (44%), Gaps = 16/166 (9%) Query: 21 MKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQE 80 +++ ++GD+ GKS L+ RF+ + T +K K + ++G+ + + + AG Sbjct: 8 LRLGVLGDARSGKSSLIHRFLTGSYQ-VLEKTESEQYK-KEMLVDGQTHLVLIREEAG-- 63 Query: 81 RFRTITTAYYRG-AMGIILVYDVTDERTFTNIKQW---FKTVNEHANDEAQLLLVGNK-- 134 A + G A +I V+ + DE +F + + ++ L LVG + Sbjct: 64 ----APDAKFSGWADAVIFVFSLEDENSFQAVSRLHGQLSSLRGEGRGGLALALVGTQDR 119 Query: 135 -SDMETRVVTADQGEALAKELG-IPFIESSAKNDDNVNEIFFTLAK 178 S RVV + AL ++ + E+ A NV+ +F +A+ Sbjct: 120 ISASSPRVVGDARARALCADMKRCSYYETCATYGLNVDRVFQEVAQ 165 >5ZZM-A nrPDB Length = 426 Score = 28.5 bits (62), Expect = 2.4, Method: Compositional matrix adjust. Identities = 35/123 (28%), Positives = 51/123 (41%), Gaps = 13/123 (10%) Query: 25 LIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDIN--GKKVKLQLWDTAGQERF 82 L+G + GKS L R E + + +D ++ +D+ G+ V L DT G R Sbjct: 202 LVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVGETV---LADTVGFIRH 258 Query: 83 --RTITTAY------YRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNK 134 + A+ R A ++ V D D R NI+ + E E LLV NK Sbjct: 259 LPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPTLLVMNK 318 Query: 135 SDM 137 DM Sbjct: 319 IDM 321 >3S1A-A nrPDB Length = 525 Score = 28.1 bits (61), Expect = 2.7, Method: Compositional matrix adjust. Identities = 18/42 (42%), Positives = 24/42 (57%), Gaps = 2/42 (4%) Query: 2 SGLRTVSASSGNGKSYDSIMKILLIGDSGVGKSCLLVRFVED 43 SG+ + G G DSI IL G +G GK+ L+ RFVE+ Sbjct: 265 SGVVRLDEMCGGGFFKDSI--ILATGATGTGKTLLVSRFVEN 304 >1K4Y-A nrPDB Length = 534 Score = 28.1 bits (61), Expect = 2.7, Method: Compositional matrix adjust. Identities = 11/33 (33%), Positives = 18/33 (54%) Query: 135 SDMETRVVTADQGEALAKELGIPFIESSAKNDD 167 SDM + V D G+ + LG PF++ A ++ Sbjct: 434 SDMRPKTVIGDHGDEIFSVLGAPFLKEGATEEE 466 >1MX5-A nrPDB Length = 548 Score = 28.1 bits (61), Expect = 2.7, Method: Compositional matrix adjust. Identities = 11/33 (33%), Positives = 18/33 (54%) Query: 135 SDMETRVVTADQGEALAKELGIPFIESSAKNDD 167 SDM+ + V D G+ L G PF++ A ++ Sbjct: 438 SDMKPKTVIGDHGDELFSVFGAPFLKEGASEEE 470 >2QAG-C nrPDB Length = 418 Score = 28.1 bits (61), Expect = 2.8, Method: Compositional matrix adjust. Identities = 17/49 (34%), Positives = 30/49 (61%), Gaps = 5/49 (10%) Query: 23 ILLIGDSGVGKSCLL-VRFVEDKFNPSFITTIGIDFKI-KTVDINGKKV 69 ++++G+SG+GKS L+ F+ D ++P + G +I KTV + KV Sbjct: 34 LMVVGESGLGKSTLINSLFLTDLYSPEY---PGPSHRIKKTVQVEQSKV 79 >4ARZ-A nrPDB Length = 310 Score = 28.1 bits (61), Expect = 3.2, Method: Compositional matrix adjust. Identities = 35/160 (21%), Positives = 66/160 (41%), Gaps = 34/160 (21%) Query: 22 KILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVK------LQLWD 75 K+LL+G SG GKS + + ++ +G T+D+ ++ L LWD Sbjct: 8 KLLLMGRSGSGKSS-MRSIIFSNYSAFDTRRLG-----ATIDVEHSHLRFLGNMTLNLWD 61 Query: 76 TAGQE-----RFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNE--HANDEAQL 128 GQ+ F ++ +I V+DV +I+ + K + + + +A++ Sbjct: 62 CGGQDVFMENYFTKQKDHIFQMVQVLIHVFDVESTEVLKDIEIFAKALKQLRKYSPDAKI 121 Query: 129 LLVGNKSDMETRVVTADQGEAL-----------AKELGIP 157 ++ +K D+ V D+ E L + E G P Sbjct: 122 FVLLHKMDL----VQLDKREELFQIMMKNLSETSSEFGFP 157 >2GAO-A nrPDB Length = 208 Score = 28.1 bits (61), Expect = 3.2, Method: Compositional matrix adjust. Identities = 26/119 (21%), Positives = 45/119 (37%), Gaps = 12/119 (10%) Query: 22 KILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQER 81 K++ +G GK+ LL +D+ T + ++ + +D G E+ Sbjct: 37 KLVFLGLDNAGKTTLLHMLKDDRLGQHVPT-----LHPTSEELTIAGMTFTTFDLGGHEQ 91 Query: 82 FRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDE----AQLLLVGNKSD 136 R + Y GI+ + D D K +N DE +L++GNK D Sbjct: 92 ARRVWKNYLPAINGIVFLVDCADHSRLVESKV---ELNALMTDETISNVPILILGNKID 147 >2PTS-A nrPDB Length = 462 Score = 27.7 bits (60), Expect = 3.7, Method: Compositional matrix adjust. Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 2/54 (3%) Query: 44 KFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQERFRTITTAYYRGAMGII 97 +F+ F+T++GI + T I +L+D RF TI + R G I Sbjct: 228 QFSEEFVTSLGIQWNPYTTQIEPHDYIAELFDCVA--RFNTILIDFDRDVWGYI 279 >1ZQ1-C nrPDB Length = 633 Score = 27.7 bits (60), Expect = 4.2, Method: Compositional matrix adjust. Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 3/56 (5%) Query: 154 LGIPFIESSAKNDDNVNEIFFTLAKLIQEKIDSNKLVGVGNG---KEGNISINSGS 206 LGIP IE S D + E +AK I + + + K V G G ++ N+SI G+ Sbjct: 183 LGIPLIEISTTPDIHHPEQAKVVAKFIGDALRATKKVKRGLGTIRQDLNVSIKGGA 238 >1YE8-A nrPDB Length = 178 Score = 27.3 bits (59), Expect = 4.6, Method: Compositional matrix adjust. Identities = 11/22 (50%), Positives = 17/22 (77%) Query: 21 MKILLIGDSGVGKSCLLVRFVE 42 MKI++ G+ GVGK+ L+ + VE Sbjct: 1 MKIIITGEPGVGKTTLVKKIVE 22 >2QAG-A nrPDB Length = 361 Score = 27.3 bits (59), Expect = 4.7, Method: Compositional matrix adjust. Identities = 18/65 (27%), Positives = 34/65 (52%), Gaps = 9/65 (13%) Query: 23 ILLIGDSGVGKSCLL-VRFVEDKFNPSFIT--------TIGIDFKIKTVDINGKKVKLQL 73 ++++G+SG+GKS L+ F+ D + I T+ I+ ++ G K++L + Sbjct: 40 LMVVGESGLGKSTLINSLFLTDLYPERVIPGAAEKIERTVQIEASTVEIEERGVKLRLTV 99 Query: 74 WDTAG 78 DT G Sbjct: 100 VDTPG 104 >3FTQ-A nrPDB Length = 274 Score = 27.3 bits (59), Expect = 5.3, Method: Compositional matrix adjust. Identities = 18/65 (27%), Positives = 34/65 (52%), Gaps = 9/65 (13%) Query: 23 ILLIGDSGVGKSCLL-VRFVEDKFNPSFIT--------TIGIDFKIKTVDINGKKVKLQL 73 ++++G+SG+GKS L+ F+ D + I T+ I+ ++ G K++L + Sbjct: 8 LMVVGESGLGKSTLINSLFLTDLYPERIIPGAAEKIERTVQIEASTVEIEERGVKLRLTV 67 Query: 74 WDTAG 78 DT G Sbjct: 68 VDTPG 72 >3T5D-A nrPDB Length = 274 Score = 27.3 bits (59), Expect = 5.5, Method: Compositional matrix adjust. Identities = 17/49 (34%), Positives = 30/49 (61%), Gaps = 5/49 (10%) Query: 23 ILLIGDSGVGKSCLL-VRFVEDKFNPSFITTIGIDFKI-KTVDINGKKV 69 ++++G+SG+GKS L+ F+ D ++P + G +I KTV + KV Sbjct: 11 LMVVGESGLGKSTLINSLFLTDLYSPEY---PGPSHRIKKTVQVEQSKV 56 >4ZU9-A nrPDB Length = 582 Score = 26.9 bits (58), Expect = 6.2, Method: Compositional matrix adjust. Identities = 16/49 (32%), Positives = 22/49 (44%) Query: 53 IGIDFKIKTVDINGKKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYD 101 + ID +D +L++ D G ERF A A G+ILV D Sbjct: 39 LSIDIGFAYIDFPDINTRLEIIDVPGHERFIKNAIAGICSASGLILVVD 87 >5CYO-A nrPDB Length = 274 Score = 26.6 bits (57), Expect = 8.4, Method: Compositional matrix adjust. Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 9/65 (13%) Query: 23 ILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDI---------NGKKVKLQL 73 I+++G SG+GKS L+ + K + + + KT++I G ++KL + Sbjct: 7 IMVVGQSGLGKSTLINTLFKSKISRKSVQPTSEERIPKTIEIKSITHDIEEKGVRMKLTV 66 Query: 74 WDTAG 78 DT G Sbjct: 67 IDTPG 71 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 3CPH-A nrPDB 309 5e-85 5SZH-B nrPDB 271 2e-73 3CUE-F nrPDB 266 4e-72 2OCY-C nrPDB 259 5e-70 5FBL-B nrPDB 258 1e-69 5SZJ-A nrPDB 257 2e-69 5SZI-A nrPDB 253 5e-68 2RHD-A nrPDB 252 8e-68 6O62-A nrPDB 250 3e-67 3L0I-B nrPDB 248 9e-67 4LHX-A nrPDB 248 1e-66 2WWX-A nrPDB 243 6e-65 2F9L-A nrPDB 242 1e-64 5LPN-A nrPDB 240 3e-64 1YZN-A nrPDB 240 3e-64 3CPJ-B nrPDB 239 6e-64 2GF9-A nrPDB 238 9e-64 4UJ4-A nrPDB 238 2e-63 1Z0A-A nrPDB 238 2e-63 1ZBD-A nrPDB 237 2e-63 2A5J-A nrPDB 236 6e-63 4RKE-A nrPDB 234 2e-62 5UB8-A nrPDB 234 3e-62 3DZ8-A nrPDB 233 4e-62 3RAB-A nrPDB 233 5e-62 2EW1-A nrPDB 232 9e-62 4RKF-A nrPDB 231 1e-61 2O52-A nrPDB 230 3e-61 2BMD-A nrPDB 230 3e-61 1Z0F-A nrPDB 228 1e-60 2G6B-A nrPDB 228 2e-60 1X3S-A nrPDB 227 4e-60 2F7S-A nrPDB 225 1e-59 3RWM-B nrPDB 225 2e-59 6HUF-A nrPDB 224 3e-59 5XR6-A nrPDB 223 3e-59 6IF2-B nrPDB 223 3e-59 4G01-B nrPDB 220 3e-58 2HEI-A nrPDB 220 5e-58 2IL1-A nrPDB 219 6e-58 3TSO-A nrPDB 219 7e-58 2HUP-A nrPDB 219 7e-58 2G77-B nrPDB 219 8e-58 2IEZ-A nrPDB 218 1e-57 2IEY-A nrPDB 217 2e-57 1TU4-A nrPDB 217 2e-57 3BFK-A nrPDB 216 5e-57 3BC1-A nrPDB 216 8e-57 4KYI-B nrPDB 216 8e-57 1Z06-A nrPDB 215 9e-57 2FG5-A nrPDB 213 3e-56 1EK0-A nrPDB 213 5e-56 1YVD-A nrPDB 212 9e-56 1WMS-A nrPDB 212 1e-55 4QXA-A nrPDB 211 2e-55 2OCB-A nrPDB 209 7e-55 2FFQ-A nrPDB 208 1e-54 5CM8-B nrPDB 208 1e-54 1YZU-A nrPDB 208 2e-54 1D5C-A nrPDB 207 3e-54 5C2K-A nrPDB 206 6e-54 4KLZ-A nrPDB 205 9e-54 2GIL-A nrPDB 204 2e-53 5LEF-A nrPDB 204 3e-53 5YOZ-A nrPDB 204 3e-53 2P5S-A nrPDB 203 4e-53 5JCP-B nrPDB 203 6e-53 6IYB-A nrPDB 202 1e-52 5ZHX-e nrPDB 201 2e-52 2J0V-A nrPDB 199 9e-52 5LDD-C nrPDB 198 2e-51 4M8N-E nrPDB 197 4e-51 2KE5-A nrPDB 196 5e-51 3TH5-A nrPDB 195 1e-50 1ZC4-A nrPDB 194 2e-50 3RYT-C nrPDB 193 3e-50 2NTY-C nrPDB 192 8e-50 2FV8-A nrPDB 192 8e-50 2J1L-A nrPDB 192 1e-49 4DXA-A nrPDB 191 1e-49 2W2X-A nrPDB 191 2e-49 4PHF-A nrPDB 191 2e-49 3WYF-A nrPDB 191 2e-49 3BWD-D nrPDB 190 3e-49 4WA7-A nrPDB 190 4e-49 3CON-A nrPDB 190 5e-49 2WBL-C nrPDB 190 5e-49 2WKQ-A nrPDB 190 6e-49 5XOJ-A nrPDB 189 7e-49 5UHV-A nrPDB 189 7e-49 5WDQ-A nrPDB 189 9e-49 2N1B-A nrPDB 188 1e-48 4KU4-A nrPDB 188 2e-48 4U5X-A nrPDB 188 2e-48 1Z22-A nrPDB 187 3e-48 5UWI-A nrPDB 187 4e-48 5CLL-A nrPDB 187 4e-48 4FMC-F nrPDB 187 4e-48 2ATX-A nrPDB 185 9e-48 5WDR-A nrPDB 185 1e-47 3VHL-B nrPDB 185 1e-47 1RYH-A nrPDB 184 2e-47 4CZ2-A nrPDB 184 3e-47 2ERX-A nrPDB 183 5e-47 3A58-B nrPDB 182 1e-46 5ZVP-A nrPDB 181 1e-46 3CBQ-A nrPDB 180 4e-46 3PIR-A nrPDB 179 7e-46 5VCU-A nrPDB 179 7e-46 2ERY-A nrPDB 179 9e-46 2G3Y-A nrPDB 179 1e-45 2Q3H-A nrPDB 177 3e-45 2ATV-A nrPDB 176 6e-45 6FF8-A nrPDB 175 1e-44 4DJT-A nrPDB 175 2e-44 2FN4-A nrPDB 175 2e-44 3Q85-A nrPDB 174 3e-44 2CJW-A nrPDB 174 3e-44 2GF0-A nrPDB 173 6e-44 3REG-A nrPDB 172 9e-44 3CLV-A nrPDB 171 3e-43 5XC3-A nrPDB 170 3e-43 3OES-A nrPDB 168 1e-42 3T5G-A nrPDB 168 1e-42 4MIT-A nrPDB 166 4e-42 3E5H-A nrPDB 166 7e-42 3Q72-A nrPDB 164 3e-41 2NZJ-A nrPDB 162 9e-41 3RAP-R nrPDB 162 1e-40 1GWN-A nrPDB 160 4e-40 1M7B-A nrPDB 158 2e-39 3LVQ-E nrPDB 154 4e-38 6FAE-B nrPDB 147 3e-36 5EE5-B nrPDB 144 2e-35 2REX-B nrPDB 144 3e-35 3O47-A nrPDB 144 4e-35 3LRP-A nrPDB 143 4e-35 4YLG-A nrPDB 143 6e-35 3AQ4-A nrPDB 141 2e-34 6DFF-C nrPDB 141 2e-34 2A5F-A nrPDB 140 3e-34 1J2J-A nrPDB 140 4e-34 6BBQ-A nrPDB 139 7e-34 5UF8-A nrPDB 139 1e-33 2B6H-A nrPDB 139 1e-33 5NZV-F nrPDB 139 1e-33 5C1S-A nrPDB 139 1e-33 1MOZ-A nrPDB 138 3e-33 4ILE-A nrPDB 136 5e-33 2AL7-A nrPDB 136 1e-32 1Z6X-A nrPDB 134 2e-32 5HZH-A nrPDB 134 3e-32 3C5C-A nrPDB 131 2e-31 6HLU-A nrPDB 131 2e-31 3DPU-A nrPDB 131 3e-31 2X77-A nrPDB 129 7e-31 1YZG-A nrPDB 129 1e-30 4ZI3-A nrPDB 126 7e-30 2H16-A nrPDB 124 2e-29 1KSG-A nrPDB 122 1e-28 2YC4-C nrPDB 122 2e-28 3BH6-A nrPDB 120 4e-28 4V0N-A nrPDB 120 4e-28 4WNR-A nrPDB 117 4e-27 2H57-A nrPDB 116 9e-27 3D6T-B nrPDB 107 3e-24 Sequences not found previously or not previously below threshold: 5DE3-A nrPDB 116 7e-27 5DI3-B nrPDB 90 7e-19 4M9Q-A nrPDB 90 8e-19 4BAS-A nrPDB 89 1e-18 3IHW-A nrPDB 89 2e-18 1M2O-B nrPDB 87 7e-18 6GNI-B nrPDB 86 1e-17 2GAO-A nrPDB 81 4e-16 2IWR-A nrPDB 79 9e-16 1F6B-A nrPDB 79 2e-15 6GDG-D nrPDB 74 4e-14 4C0K-A nrPDB 73 7e-14 6G79-A nrPDB 66 8e-12 5YMX-A nrPDB 66 1e-11 3T1O-A nrPDB 65 2e-11 2GJ9-A nrPDB 65 2e-11 6IAE-A nrPDB 64 3e-11 2LKD-A nrPDB 63 1e-10 6CES-A nrPDB 61 4e-10 3K53-A nrPDB 60 7e-10 1XZP-A nrPDB 59 1e-09 5J8B-z nrPDB 58 4e-09 5IMR-C nrPDB 58 4e-09 2E87-A nrPDB 56 1e-08 2DYK-A nrPDB 56 1e-08 3GEE-A nrPDB 54 5e-08 6GB2-BC nrPDB 54 5e-08 4ARZ-A nrPDB 54 6e-08 3CB4-D nrPDB 53 1e-07 2YWH-A nrPDB 53 1e-07 2CXX-A nrPDB 53 1e-07 1WF3-A nrPDB 53 1e-07 5ZZM-A nrPDB 53 1e-07 3J8G-X nrPDB 52 2e-07 3GEH-A nrPDB 52 2e-07 1MKY-A nrPDB 52 2e-07 3IZY-P nrPDB 51 3e-07 5KUT-A nrPDB 51 3e-07 5KU1-A nrPDB 51 5e-07 5KSO-A nrPDB 51 5e-07 6D4G-A nrPDB 50 1e-06 5DN8-A nrPDB 49 1e-06 2GTP-A nrPDB 49 1e-06 5LAD-A nrPDB 49 1e-06 1LNZ-A nrPDB 49 2e-06 5YT0-A nrPDB 49 2e-06 5FG3-A nrPDB 49 2e-06 3V00-C nrPDB 49 2e-06 3PR1-A nrPDB 48 3e-06 2WJG-A nrPDB 48 3e-06 3C5H-A nrPDB 48 3e-06 3A1U-A nrPDB 48 5e-06 4ZU9-A nrPDB 47 6e-06 3R9W-A nrPDB 47 6e-06 2Q3F-A nrPDB 47 7e-06 4KJZ-A nrPDB 46 8e-06 4B44-A nrPDB 46 9e-06 3LLU-A nrPDB 46 1e-05 5VAI-A nrPDB 46 1e-05 3J4J-A nrPDB 46 1e-05 3A1W-A nrPDB 46 2e-05 4QJ3-A nrPDB 45 2e-05 2QAG-A nrPDB 45 3e-05 2BCJ-Q nrPDB 45 3e-05 2ODE-A nrPDB 45 3e-05 4V7F-o nrPDB 45 3e-05 3FTQ-A nrPDB 44 4e-05 3IEU-A nrPDB 44 4e-05 2QTH-A nrPDB 44 5e-05 6CES-C nrPDB 44 5e-05 1UDX-A nrPDB 44 5e-05 4CSU-9 nrPDB 44 5e-05 1SHZ-A nrPDB 44 5e-05 1ZO1-I nrPDB 44 6e-05 5X4B-A nrPDB 44 7e-05 4DCU-A nrPDB 43 7e-05 2WJI-A nrPDB 43 7e-05 6OIJ-A nrPDB 43 9e-05 4V8Y-CP nrPDB 43 1e-04 3WBI-A nrPDB 43 1e-04 3JCN-b nrPDB 43 1e-04 5M04-A nrPDB 42 1e-04 4NCF-A nrPDB 42 1e-04 4V8Z-CV nrPDB 42 1e-04 3T5D-A nrPDB 42 2e-04 3EC1-A nrPDB 42 2e-04 6OIK-A nrPDB 42 2e-04 5KH0-A nrPDB 42 3e-04 4UJC-AB nrPDB 41 3e-04 2QAG-C nrPDB 41 5e-04 3H2Y-A nrPDB 41 5e-04 5CYO-A nrPDB 40 7e-04 6D9H-A nrPDB 40 9e-04 4WQY-BZ nrPDB 40 0.001 4FID-A nrPDB 39 0.001 1ZCB-A nrPDB 39 0.001 1ZCA-A nrPDB 39 0.001 4V89-AW nrPDB 39 0.002 1TAG-A nrPDB 39 0.002 3LX8-A nrPDB 38 0.003 1PUJ-A nrPDB 38 0.003 1S0U-A nrPDB 38 0.004 3JB9-B nrPDB 37 0.004 5GAD-l nrPDB 37 0.008 4R98-A nrPDB 36 0.010 4KV9-A nrPDB 36 0.010 5IRR-A nrPDB 36 0.012 6CS8-A nrPDB 36 0.012 1HEY-A nrPDB 36 0.013 2QAG-B nrPDB 35 0.019 1SUL-A nrPDB 35 0.021 4Z54-A nrPDB 35 0.032 3W5J-A nrPDB 34 0.040 3LXX-A nrPDB 34 0.044 5AR1-A nrPDB 34 0.048 6HZK-A nrPDB 34 0.049 5H7J-A nrPDB 34 0.051 1NI3-A nrPDB 34 0.056 4AC9-A nrPDB 34 0.057 5H7K-A nrPDB 34 0.058 1YE8-A nrPDB 34 0.062 3TR5-A nrPDB 34 0.065 6G12-A nrPDB 34 0.069 2XTZ-A nrPDB 33 0.073 2OHF-A nrPDB 33 0.075 5EE0-A nrPDB 33 0.088 3CNO-A nrPDB 33 0.090 2YV5-A nrPDB 33 0.095 3TK1-A nrPDB 33 0.097 5NON-A nrPDB 32 0.13 2VNE-A nrPDB 32 0.13 3ZJC-A nrPDB 32 0.13 2OUK-A nrPDB 32 0.14 6O81-S nrPDB 32 0.15 6FEC-S nrPDB 32 0.15 5B3F-A nrPDB 32 0.18 3PEN-A nrPDB 32 0.20 4U00-A nrPDB 32 0.22 1U0L-A nrPDB 32 0.23 4TLD-A nrPDB 32 0.24 2IYT-A nrPDB 32 0.26 6F1T-i nrPDB 31 0.28 4YMS-J nrPDB 31 0.28 3S1A-A nrPDB 31 0.28 2WIC-A nrPDB 31 0.28 6F1Y-j nrPDB 31 0.29 3DEF-A nrPDB 31 0.29 2P5T-B nrPDB 31 0.31 2DHR-A nrPDB 31 0.33 1IY1-A nrPDB 31 0.33 4Z8X-A nrPDB 31 0.33 2I3B-A nrPDB 31 0.33 5IDV-A nrPDB 31 0.34 4ZKD-A nrPDB 31 0.35 5OCH-A nrPDB 31 0.37 1EFM-A nrPDB 31 0.39 2QU8-A nrPDB 31 0.42 6C2V-A nrPDB 31 0.43 2P8Y-T nrPDB 31 0.44 5A9Z-CA nrPDB 31 0.46 4F4J-A nrPDB 31 0.48 1JAL-A nrPDB 31 0.51 3IZQ-1 nrPDB 31 0.55 5G06-P nrPDB 31 0.55 3P27-A nrPDB 31 0.55 2IT1-A nrPDB 31 0.56 5ZLU-EE nrPDB 31 0.60 5AUQ-A nrPDB 30 0.64 4RDY-A nrPDB 30 0.68 3FVQ-A nrPDB 30 0.68 5C78-A nrPDB 30 0.72 4FIN-A nrPDB 30 0.72 2IW3-A nrPDB 30 0.72 3V9H-A nrPDB 30 0.74 3J81-k nrPDB 30 0.77 5LL6-h nrPDB 30 0.77 5IFK-A nrPDB 30 0.79 3IBY-A nrPDB 30 0.83 2R65-A nrPDB 30 0.83 4FGW-A nrPDB 30 0.86 2GZA-A nrPDB 30 0.86 3B5X-A nrPDB 30 0.90 5JZV-A nrPDB 30 0.93 5D4W-A nrPDB 30 1.0 1R6B-X nrPDB 30 1.0 3JVU-A nrPDB 29 1.1 2YYZ-A nrPDB 29 1.1 4RY2-A nrPDB 29 1.1 3PXG-A nrPDB 29 1.1 6HA8-V nrPDB 29 1.1 5TY0-A nrPDB 29 1.2 1LVG-A nrPDB 29 1.2 3PXI-A nrPDB 29 1.2 5B57-C nrPDB 29 1.3 5MKK-A nrPDB 29 1.3 6QUZ-B nrPDB 29 1.3 6FT6-s nrPDB 29 1.3 6FA9-A nrPDB 29 1.4 4MRS-A nrPDB 29 1.4 4V6W-Az nrPDB 29 1.4 2PJZ-A nrPDB 29 1.5 3VAA-A nrPDB 29 1.5 6EMW-E nrPDB 29 1.5 1PUI-A nrPDB 29 1.6 5EUF-A nrPDB 29 1.6 6EM8-A nrPDB 29 1.6 3GD7-A nrPDB 29 1.6 1QVR-A nrPDB 29 1.6 6N0I-A nrPDB 29 1.7 4CIU-A nrPDB 29 1.7 5OFO-C nrPDB 29 1.7 1YR7-A nrPDB 29 1.7 5W7Q-A nrPDB 29 1.7 2NQL-A nrPDB 29 1.8 4G1U-C nrPDB 29 1.8 2AXV-A nrPDB 29 1.8 3GMT-A nrPDB 29 1.8 1JBK-A nrPDB 29 1.8 4NP6-A nrPDB 29 1.9 4MYH-A nrPDB 29 1.9 1OFI-A nrPDB 29 1.9 5JSZ-B nrPDB 29 1.9 3VX4-A nrPDB 29 1.9 4Q7L-A nrPDB 29 1.9 6ED3-A nrPDB 29 2.0 4HSE-A nrPDB 29 2.0 6I3O-A nrPDB 29 2.0 1H65-A nrPDB 29 2.0 6N8J-m nrPDB 29 2.1 3J3U-A nrPDB 29 2.2 1E94-E nrPDB 29 2.2 6D00-1 nrPDB 29 2.2 1IM2-A nrPDB 29 2.2 4N1A-A nrPDB 29 2.2 6FOC-D nrPDB 29 2.3 2P65-A nrPDB 29 2.3 1IHU-A nrPDB 29 2.3 3WMF-A nrPDB 29 2.3 2GA8-A nrPDB 29 2.3 6N8N-W nrPDB 29 2.3 5NIK-J nrPDB 29 2.3 5MRE-WW nrPDB 29 2.3 5LJA-A nrPDB 29 2.3 6QUZ-A nrPDB 28 2.4 6HCM-k1 nrPDB 28 2.4 5T62-W nrPDB 28 2.4 4YPN-A nrPDB 28 2.4 4YPL-A nrPDB 28 2.4 6MTD-v nrPDB 28 2.5 3EC2-A nrPDB 28 2.7 5OWV-A nrPDB 28 2.7 5Z1X-A nrPDB 28 2.8 4UUD-B nrPDB 28 2.9 3PV0-A nrPDB 28 2.9 3L43-A nrPDB 28 2.9 2X2E-A nrPDB 28 2.9 2AKA-B nrPDB 28 2.9 2CE7-A nrPDB 28 2.9 5GKO-A nrPDB 28 3.0 2PX0-A nrPDB 28 3.0 6MFU-A nrPDB 28 3.2 2DBY-A nrPDB 28 3.3 3VQT-A nrPDB 28 3.3 2W6D-A nrPDB 28 3.3 5A3F-A nrPDB 28 3.4 2PCL-A nrPDB 28 3.4 6G2G-A nrPDB 28 3.4 3KW7-A nrPDB 28 3.4 6DLV-b nrPDB 28 3.5 4XD7-D nrPDB 28 3.6 4XGC-D nrPDB 28 3.6 4Q7K-A nrPDB 28 3.6 4XGC-E nrPDB 28 3.7 5LKM-A nrPDB 28 3.8 4HUQ-A nrPDB 28 3.9 6H7G-A nrPDB 28 4.0 5CA8-A nrPDB 28 4.0 5DO7-A nrPDB 27 4.1 4ZIR-B nrPDB 27 4.1 1WDT-A nrPDB 27 4.1 4DBL-C nrPDB 27 4.4 4HZI-A nrPDB 27 4.5 4LG0-A nrPDB 27 4.5 6BZR-B nrPDB 27 4.7 3D0O-A nrPDB 27 4.7 1R5O-A nrPDB 27 4.7 3EPJ-A nrPDB 27 4.9 3NHB-A nrPDB 27 4.9 6DJQ-A nrPDB 27 5.0 5D0U-A nrPDB 27 5.1 6E11-1 nrPDB 27 5.4 5IK2-D nrPDB 27 5.5 5GM6-Y nrPDB 27 5.5 5AJ2-A nrPDB 27 5.5 4R7Z-A nrPDB 27 5.8 2ZBL-A nrPDB 27 5.9 6CY1-A nrPDB 27 5.9 5DGX-A nrPDB 27 6.3 4R7Y-A nrPDB 27 6.5 5DUI-A nrPDB 27 6.7 4QIW-C nrPDB 27 6.7 5AVO-A nrPDB 27 7.0 4O0M-A nrPDB 27 7.2 2JAQ-A nrPDB 27 7.4 5JWO-A nrPDB 27 7.9 1EZ4-A nrPDB 27 8.7 5ANB-A nrPDB 26 9.3 >3CPH-A nrPDB Length = 213 Score = 309 bits (793), Expect = 5e-85, Method: Composition-based stats. Identities = 213/213 (100%), Positives = 213/213 (100%) Query: 1 MSGLRTVSASSGNGKSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIK 60 MSGLRTVSASSGNGKSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIK Sbjct: 1 MSGLRTVSASSGNGKSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIK 60 Query: 61 TVDINGKKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNE 120 TVDINGKKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNE Sbjct: 61 TVDINGKKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNE 120 Query: 121 HANDEAQLLLVGNKSDMETRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLI 180 HANDEAQLLLVGNKSDMETRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLI Sbjct: 121 HANDEAQLLLVGNKSDMETRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLI 180 Query: 181 QEKIDSNKLVGVGNGKEGNISINSGSGNSSKSN 213 QEKIDSNKLVGVGNGKEGNISINSGSGNSSKSN Sbjct: 181 QEKIDSNKLVGVGNGKEGNISINSGSGNSSKSN 213 >5SZH-B nrPDB Length = 203 Score = 271 bits (693), Expect = 2e-73, Method: Composition-based stats. Identities = 101/204 (49%), Positives = 144/204 (70%), Gaps = 4/204 (1%) Query: 13 NGKSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQ 72 YD + K+LLIGDSGVGKSCLL+RF +D + S+I+TIG+DFKI+T++++GK +KLQ Sbjct: 3 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQ 62 Query: 73 LWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVG 132 +WDTAGQERFRTIT++YYRGA GII+VYDVTD+ ++ N+KQW + ++ +A++ LLVG Sbjct: 63 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVG 122 Query: 133 NKSDM-ETRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEKIDSNKLVG 191 NKSD+ +VV + A LGIPF+E+SAKN NV + F T+A I++++ G Sbjct: 123 NKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASG 182 Query: 192 VGNGKEGNISINSGSGNSSKSNCC 215 G+ N+ I+S + CC Sbjct: 183 ---GERPNLKIDSTPVKPAGGGCC 203 >3CUE-F nrPDB Length = 206 Score = 266 bits (681), Expect = 4e-72, Method: Composition-based stats. Identities = 98/206 (47%), Positives = 139/206 (67%), Gaps = 3/206 (1%) Query: 13 NGKSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQ 72 YD + K+LLIG+SGVGKSCLL+RF +D + +I+TIG+DFKIKTV+++GK VKLQ Sbjct: 1 MNSEYDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQ 60 Query: 73 LWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVG 132 +WDTAGQERFRTIT++YYRG+ GII+VYDVTD+ +F +K W + ++ +A LLVG Sbjct: 61 IWDTAGQERFRTITSSYYRGSHGIIIVYDVTDQESFNGVKMWLQEIDRYATSTVLKLLVG 120 Query: 133 NKSDMET-RVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEKIDSNKLVG 191 NK D++ RVV D + A +PF+E+SA + NV + F T+A+ I+E + L Sbjct: 121 NKCDLKDKRVVEYDVAKEFADANKMPFLETSALDSTNVEDAFLTMARQIKESMSQQNLNE 180 Query: 192 VGNGKE--GNISINSGSGNSSKSNCC 215 KE GN+++ S ++ CC Sbjct: 181 TTQKKEDKGNVNLKGQSLTNTGGGCC 206 >2OCY-C nrPDB Length = 170 Score = 259 bits (663), Expect = 5e-70, Method: Composition-based stats. Identities = 170/170 (100%), Positives = 170/170 (100%) Query: 18 DSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTA 77 DSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTA Sbjct: 1 DSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTA 60 Query: 78 GQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSDM 137 GQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSDM Sbjct: 61 GQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSDM 120 Query: 138 ETRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEKIDSN 187 ETRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEKIDSN Sbjct: 121 ETRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEKIDSN 170 >5FBL-B nrPDB Length = 221 Score = 258 bits (660), Expect = 1e-69, Method: Composition-based stats. Identities = 86/225 (38%), Positives = 133/225 (59%), Gaps = 19/225 (8%) Query: 1 MSGLRTVSASSGNGKSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIK 60 M + T YD + K++LIGDSGVGKS LL RF ++FN +TIG++F + Sbjct: 3 MGSMGTR------DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATR 56 Query: 61 TVDINGKKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNE 120 ++ ++GK +K Q+WDTAGQER+R IT+AYYRGA+G +LVYD+ T+ N+++W K + + Sbjct: 57 SIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRD 116 Query: 121 HANDEAQLLLVGNKSDMET-RVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKL 179 HA+ ++LVGNKSD+ R V D+ A A++ G+ FIE+SA + NV F T+ Sbjct: 117 HADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTE 176 Query: 180 IQEKIDSNKLVGVGNGKEGNIS---------INSGSGNSSKSNCC 215 I + ++ + +E ++S + + N K CC Sbjct: 177 IYRIVSQKQM---SDRRENDMSPSNNVVPIHVPPTTENKPKVQCC 218 >5SZJ-A nrPDB Length = 202 Score = 257 bits (658), Expect = 2e-69, Method: Composition-based stats. Identities = 111/205 (54%), Positives = 150/205 (73%), Gaps = 8/205 (3%) Query: 13 NGKSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQ 72 K+YD + K+LLIGDSGVGK+C+L RF +D FN +FI+TIGIDFKIKTV++ GKK+KLQ Sbjct: 4 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQ 63 Query: 73 LWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVG 132 +WDTAGQERF TITT+YYRGAMGI+LVYD+T+ ++F NI +W + ++EHAN++ + +L+G Sbjct: 64 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLG 123 Query: 133 NKSDMET-RVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEKIDSNKLVG 191 NK DM+ RVV +GE +A+E GI F E+SAK + N+ + F TLA+ I K Sbjct: 124 NKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRK------TP 177 Query: 192 VGNGKEGNISINSGSGNSS-KSNCC 215 V N+ I+SG G + KS CC Sbjct: 178 VKEPNSENVDISSGGGVTGWKSKCC 202 >5SZI-A nrPDB Length = 209 Score = 253 bits (646), Expect = 5e-68, Method: Composition-based stats. Identities = 104/199 (52%), Positives = 146/199 (73%), Gaps = 1/199 (0%) Query: 13 NGKSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQ 72 K+YD + K+LLIGDSGVGK+C+L RF ED FN +FI+TIGIDFKI+T++++GK++KLQ Sbjct: 3 MAKTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQ 62 Query: 73 LWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVG 132 +WDTAGQERFRTITTAYYRGAMGI+LVYD+T+E++F NI+ W + + EHA+ + + +++G Sbjct: 63 IWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILG 122 Query: 133 NKSDM-ETRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEKIDSNKLVG 191 NK D+ + R V+ ++GE LA + GI F+E+SAK + NV FFTLA+ I+ K+D Sbjct: 123 NKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGN 182 Query: 192 VGNGKEGNISINSGSGNSS 210 G + I S Sbjct: 183 SPQGSNQGVKITPDQQKRS 201 >2RHD-A nrPDB Length = 175 Score = 252 bits (644), Expect = 8e-68, Method: Composition-based stats. Identities = 99/174 (56%), Positives = 131/174 (75%), Gaps = 1/174 (0%) Query: 12 GNGKSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKL 71 G YD + K+LLIGDSGVGKSCLL+RF +D + S+I+TIG+DFKI+T+ + K VKL Sbjct: 1 GMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTISLENKTVKL 60 Query: 72 QLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLV 131 Q+WDTAGQERFRTIT++YYRGA GII+VYDVTD +F N+KQW + ++ +A + LLV Sbjct: 61 QIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDRDSFDNVKQWIQEIDRYAMENVNKLLV 120 Query: 132 GNKSDM-ETRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEKI 184 GNK D+ RVVT+D+G LA GI FIE+SAKN NV + F T+A I++++ Sbjct: 121 GNKCDLVSKRVVTSDEGRELADSHGIKFIETSAKNAYNVEQAFHTMAGEIKKRV 174 >6O62-A nrPDB Length = 184 Score = 250 bits (639), Expect = 3e-67, Method: Composition-based stats. Identities = 117/184 (63%), Positives = 154/184 (83%), Gaps = 1/184 (0%) Query: 7 VSASSGNGKSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDING 66 +S + ++YD IMK+LL+GDSGVGKSCLL+RFVEDKFNPSFITTIGIDFKI+T++ G Sbjct: 1 MSGKGTSSRAYDMIMKLLLVGDSGVGKSCLLLRFVEDKFNPSFITTIGIDFKIRTIESKG 60 Query: 67 KKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEA 126 K++KLQ+WDTAGQERFRTITTAYYRGAMGI+L+YDVTD R+F N++ WF+TV +HAN++A Sbjct: 61 KRIKLQVWDTAGQERFRTITTAYYRGAMGIVLIYDVTDSRSFENVENWFQTVTQHANEDA 120 Query: 127 QLLLVGNKSDME-TRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEKID 185 Q+ LVGNK D E R V+ +QG+ LA +L +PF+E+SAK+++NV+ IF+ LA +IQEK Sbjct: 121 QIFLVGNKCDDEVNRQVSKEQGQELAAKLNVPFLEASAKSNENVDSIFYELASIIQEKHV 180 Query: 186 SNKL 189 + Sbjct: 181 EENI 184 >3L0I-B nrPDB Length = 199 Score = 248 bits (635), Expect = 9e-67, Method: Composition-based stats. Identities = 95/175 (54%), Positives = 133/175 (76%), Gaps = 1/175 (0%) Query: 11 SGNGKSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVK 70 S YD + K+LLIGDSGVGKSCLL+RF +D + S+I+TIG+DFKI+T++++GK +K Sbjct: 24 SSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIK 83 Query: 71 LQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLL 130 LQ+WDTAGQERFRTIT++YYRGA GII+VYDVTD+ +F N+KQW + ++ +A++ LL Sbjct: 84 LQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLL 143 Query: 131 VGNKSDM-ETRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEKI 184 VGNK D+ +VV + A LGIPF+E+SAKN NV + F T+A I++++ Sbjct: 144 VGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRM 198 >4LHX-A nrPDB Length = 186 Score = 248 bits (635), Expect = 1e-66, Method: Composition-based stats. Identities = 101/176 (57%), Positives = 142/176 (80%), Gaps = 1/176 (0%) Query: 13 NGKSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQ 72 K+YD + K+LLIGDSGVGK+C+L RF ED FN +FI+TIGIDFKI+T++++GK++KLQ Sbjct: 3 MAKTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQ 62 Query: 73 LWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVG 132 +WDTAGQERFRTITTAYYRGAMGI+LVYD+T+E++F NI+ W + + EHA+ + + +++G Sbjct: 63 IWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILG 122 Query: 133 NKSDM-ETRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEKIDSN 187 NK D+ + R V+ ++GE LA + GI F+E+SAK + NV FFTLA+ I+ K+D Sbjct: 123 NKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKK 178 >2WWX-A nrPDB Length = 175 Score = 243 bits (620), Expect = 6e-65, Method: Composition-based stats. Identities = 93/173 (53%), Positives = 131/173 (75%), Gaps = 1/173 (0%) Query: 13 NGKSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQ 72 YD + K+LLIGDSGVGKSCLL+RF +D + S+I+TIG+DFKI+T++++GK +KLQ Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQ 60 Query: 73 LWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVG 132 +WDTAGQERFRTIT++YYRGA GII+VYDVTD+ +F N+KQW + ++ +A++ LLVG Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVG 120 Query: 133 NKSDM-ETRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEKI 184 K D+ +VV + A LGIPF+E+SAKN NV + F T+A I++++ Sbjct: 121 IKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRM 173 >2F9L-A nrPDB Length = 199 Score = 242 bits (617), Expect = 1e-64, Method: Composition-based stats. Identities = 80/197 (40%), Positives = 123/197 (62%), Gaps = 7/197 (3%) Query: 17 YDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDT 76 YD + K++LIGDSGVGKS LL RF ++FN +TIG++F +++ ++GK +K Q+WDT Sbjct: 2 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 61 Query: 77 AGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSD 136 AGQER+R IT+AYYRGA+G +LVYD+ T+ N+++W K + +HA+ ++LVGNKSD Sbjct: 62 AGQERYRRITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSD 121 Query: 137 MET-RVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEKIDSNKLVGVGNG 195 + R V D+ A A++ + FIE+SA + NV E F + I + ++ Sbjct: 122 LRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADRAAH 181 Query: 196 KEG------NISINSGS 206 E +IS+ + Sbjct: 182 DESPGNNVVDISVPPTT 198 >5LPN-A nrPDB Length = 177 Score = 240 bits (613), Expect = 3e-64, Method: Composition-based stats. Identities = 101/172 (58%), Positives = 137/172 (79%), Gaps = 1/172 (0%) Query: 13 NGKSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQ 72 K+YD + K+LLIGDSGVGK+C+L RF +D FN +FI+TIGIDFKIKTV++ GKK+KLQ Sbjct: 4 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQ 63 Query: 73 LWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVG 132 +WDTAGQERF TITT+YYRGAMGI+LVYD+T+ ++F NI +W + ++EHAN++ + +L+G Sbjct: 64 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLG 123 Query: 133 NKSDMET-RVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEK 183 NK DM+ RVV +GE +A+E GI F E+SAK + N+ + F TLA+ I K Sbjct: 124 NKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRK 175 >1YZN-A nrPDB Length = 185 Score = 240 bits (613), Expect = 3e-64, Method: Composition-based stats. Identities = 91/170 (53%), Positives = 126/170 (74%), Gaps = 1/170 (0%) Query: 14 GKSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQL 73 G YD + K+LLIG+SGVGKSCLL+RF +D + +I+TIG+DFKIKTV+++GK VKLQ+ Sbjct: 15 GSEYDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQI 74 Query: 74 WDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGN 133 WDTAGQERFRTIT++YYRG+ GII+VYDVTD+ +F +K W + ++ +A LLVGN Sbjct: 75 WDTAGQERFRTITSSYYRGSHGIIIVYDVTDQESFNGVKMWLQEIDRYATSTVLKLLVGN 134 Query: 134 KSDMET-RVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQE 182 K D++ RVV D + A +PF+E+SA + NV + F T+A+ I+E Sbjct: 135 KCDLKDKRVVEYDVAKEFADANKMPFLETSALDSTNVEDAFLTMARQIKE 184 >3CPJ-B nrPDB Length = 223 Score = 239 bits (611), Expect = 6e-64, Method: Composition-based stats. Identities = 85/217 (39%), Positives = 131/217 (60%), Gaps = 15/217 (6%) Query: 14 GKSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQL 73 G YD + KI+LIGDSGVGKS LL RF +++FN +TIG++F +T++I GK++K Q+ Sbjct: 7 GYDYDLLFKIVLIGDSGVGKSNLLSRFTKNEFNMDSKSTIGVEFATRTLEIEGKRIKAQI 66 Query: 74 WDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGN 133 WDTAGQER+R IT+AYYRGA+G ++VYD++ ++ N W + E+A+D + L+GN Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLSELRENADDNVAVGLIGN 126 Query: 134 KSDM-ETRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEKIDSNKLV-- 190 KSD+ R V ++ + A+E + F E+SA N +NV++ F L I +K+ +++ Sbjct: 127 KSDLAHLRAVPTEESKTFAQENQLLFTETSALNSENVDKAFEELINTIYQKVSKHQMDLG 186 Query: 191 ---------GVGNGKEGNISINSGSGNSSKS---NCC 215 G IS+ + K+ NCC Sbjct: 187 DSSANGNANGASAPNGPTISLTPTPNENKKANGNNCC 223 >2GF9-A nrPDB Length = 189 Score = 238 bits (609), Expect = 9e-64, Method: Composition-based stats. Identities = 86/174 (49%), Positives = 126/174 (72%), Gaps = 1/174 (0%) Query: 14 GKSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQL 73 + D + K+LLIG+S VGK+ L R+ +D F P+F++T+GIDFK+KTV + K++KLQ+ Sbjct: 16 PRGSDYMFKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTVYRHDKRIKLQI 75 Query: 74 WDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGN 133 WDTAGQER+RTITTAYYRGAMG +L+YD+ ++ +F ++ W + ++ D AQ++LVGN Sbjct: 76 WDTAGQERYRTITTAYYRGAMGFLLMYDIANQESFAAVQDWATQIKTYSWDNAQVILVGN 135 Query: 134 KSDME-TRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEKIDS 186 K D+E RVV A+ G LA +LG F E+SAK + NV ++F L +I EK++ Sbjct: 136 KCDLEDERVVPAEDGRRLADDLGFEFFEASAKENINVKQVFERLVDVICEKMNE 189 >4UJ4-A nrPDB Length = 185 Score = 238 bits (607), Expect = 2e-63, Method: Composition-based stats. Identities = 77/180 (42%), Positives = 117/180 (65%), Gaps = 1/180 (0%) Query: 16 SYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWD 75 YD + K++LIGDSGVGKS LL RF ++FN +TIG++F +++ ++GK +K Q+WD Sbjct: 6 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWD 65 Query: 76 TAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNKS 135 TAG ER+R IT+AYYRGA+G +LVYD+ T+ N+++W K + +HA+ ++LVGNKS Sbjct: 66 TAGLERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKS 125 Query: 136 DMET-RVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEKIDSNKLVGVGN 194 D+ R V D+ A A++ G+ FIE+SA + NV F T+ I + ++ Sbjct: 126 DLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMSDRRE 185 >1Z0A-A nrPDB Length = 174 Score = 238 bits (607), Expect = 2e-63, Method: Composition-based stats. Identities = 83/171 (48%), Positives = 120/171 (70%), Gaps = 1/171 (0%) Query: 14 GKSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQL 73 G +Y + K ++IGD+GVGKSCLL++F + +F P TIG++F + + I+GK++KLQ+ Sbjct: 4 GSAYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQI 63 Query: 74 WDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGN 133 WDTAGQE FR+IT +YYRGA G +LVYD+T TF ++ W + +H+N ++L+GN Sbjct: 64 WDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGN 123 Query: 134 KSDMET-RVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEK 183 KSD+E+ R V ++GEA A+E G+ F+E+SAK NV E F AK I EK Sbjct: 124 KSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEK 174 >1ZBD-A nrPDB Length = 203 Score = 237 bits (606), Expect = 2e-63, Method: Composition-based stats. Identities = 89/171 (52%), Positives = 126/171 (73%), Gaps = 1/171 (0%) Query: 17 YDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDT 76 +D + KIL+IG+S VGK+ L R+ +D F P+F++T+GIDFK+KT+ N K++KLQ+WDT Sbjct: 5 FDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDT 64 Query: 77 AGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSD 136 AG ER+RTITTAYYRGAMG IL+YD+T+E +F ++ W + ++ D AQ+LLVGNK D Sbjct: 65 AGLERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVLLVGNKCD 124 Query: 137 ME-TRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEKIDS 186 ME RVV++++G LA LG F E+SAK++ NV + F L +I EK+ Sbjct: 125 MEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLVDVICEKMSE 175 >2A5J-A nrPDB Length = 191 Score = 236 bits (602), Expect = 6e-63, Method: Composition-based stats. Identities = 82/177 (46%), Positives = 119/177 (67%), Gaps = 1/177 (0%) Query: 12 GNGKSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKL 71 G + K ++IGD+GVGKSCLL++F + +F P TIG++F + V+I+GK++KL Sbjct: 13 GLVPRGSYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKL 72 Query: 72 QLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLV 131 Q+WDTAGQE FR+IT +YYRGA G +LVYD+T TF ++ W + +H++ ++L+ Sbjct: 73 QIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLI 132 Query: 132 GNKSDMETRV-VTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEKIDSN 187 GNKSD+E+R V ++GEA A+E G+ F+E+SAK NV E F AK I KI Sbjct: 133 GNKSDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEIYRKIQQG 189 >4RKE-A nrPDB Length = 176 Score = 234 bits (597), Expect = 2e-62, Method: Composition-based stats. Identities = 82/173 (47%), Positives = 120/173 (69%), Gaps = 1/173 (0%) Query: 13 NGKSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQ 72 G SY + K ++IGD+GVGKSCLL++F + +F P TIG++F + + I+GK++KLQ Sbjct: 3 MGMSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQ 62 Query: 73 LWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVG 132 +WDTAG E FR+IT +YYRGA G +LVYD+T TF ++ W + +H+N ++L+G Sbjct: 63 IWDTAGLEAFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIMLIG 122 Query: 133 NKSDMET-RVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEKI 184 NKSD+++ R V ++GEA A+E G+ F+E+SA+ NV E F AK I EKI Sbjct: 123 NKSDLDSRREVKKEEGEAFAREHGLVFMETSARTAANVEEAFINTAKEIYEKI 175 >5UB8-A nrPDB Length = 222 Score = 234 bits (597), Expect = 3e-62, Method: Composition-based stats. Identities = 83/196 (42%), Positives = 125/196 (63%), Gaps = 1/196 (0%) Query: 16 SYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWD 75 Y+ + KI+LIGDSGVGKS LL RF D+FN +TIG++F +T++I+GK+VK Q+WD Sbjct: 11 DYEYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGKRVKAQIWD 70 Query: 76 TAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNKS 135 TAGQER+R IT+AYYRGA+G ++VYD+ ++ ++ +W K + EHA+ + LVGNKS Sbjct: 71 TAGQERYRAITSAYYRGAVGALIVYDIAKTESYESVSRWLKELKEHADANIIIELVGNKS 130 Query: 136 DMET-RVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEKIDSNKLVGVGN 194 D++ R V ++ + A E + F E+SA + DNV+ F L K I E I ++L + Sbjct: 131 DLDHLRAVPTEEAKNFAMENNLLFTEASALSSDNVDLSFHQLLKNIYEMISKHQLENNDS 190 Query: 195 GKEGNISINSGSGNSS 210 + + S + Sbjct: 191 KQTNTAGGPTISLTPA 206 >3DZ8-A nrPDB Length = 191 Score = 233 bits (595), Expect = 4e-62, Method: Composition-based stats. Identities = 87/171 (50%), Positives = 127/171 (74%), Gaps = 1/171 (0%) Query: 16 SYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWD 75 ++D + K+L+IG+S VGK+ L R+ +D F P+F++T+GIDFK+KTV + K+VKLQ+WD Sbjct: 19 NFDYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTVYRHEKRVKLQIWD 78 Query: 76 TAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNKS 135 TAGQER+RTITTAYYRGAMG IL+YD+T+E +F ++ W + ++ D AQ++LVGNK Sbjct: 79 TAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQIKTYSWDNAQVILVGNKC 138 Query: 136 DM-ETRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEKID 185 DM E RVV ++G+ LA++LG F E+SAK + +V + F L I +K+ Sbjct: 139 DMEEERVVPTEKGQLLAEQLGFDFFEASAKENISVRQAFERLVDAICDKMS 189 >3RAB-A nrPDB Length = 169 Score = 233 bits (594), Expect = 5e-62, Method: Composition-based stats. Identities = 90/169 (53%), Positives = 127/169 (75%), Gaps = 1/169 (0%) Query: 16 SYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWD 75 ++D + KIL+IG+S VGK+ L R+ +D F P+F++T+GIDFK+KT+ N K++KLQ+WD Sbjct: 1 NFDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWD 60 Query: 76 TAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNKS 135 TAGQER+RTITTAYYRGAMG IL+YD+T+E +F ++ W + ++ D AQ+LLVGNK Sbjct: 61 TAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVLLVGNKC 120 Query: 136 DME-TRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEK 183 DME RVV++++G LA LG F E+SAK++ NV + F L +I EK Sbjct: 121 DMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLVDVICEK 169 >2EW1-A nrPDB Length = 201 Score = 232 bits (592), Expect = 9e-62, Method: Composition-based stats. Identities = 83/182 (45%), Positives = 124/182 (68%), Gaps = 1/182 (0%) Query: 10 SSGNGKSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKV 69 G+ + YD + KI+LIG++GVGK+CL+ RF + F P TIG+DF IKTV+ING+KV Sbjct: 16 PRGSMEDYDFLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKV 75 Query: 70 KLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLL 129 KLQ+WDTAGQERFR+IT +YYR A +IL YD+T E +F + +W + + ++A+++ + Sbjct: 76 KLQIWDTAGQERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITV 135 Query: 130 LVGNKSDM-ETRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEKIDSNK 188 LVGNK D+ E R V+ + E ++ + ++E+SAK DNV ++F LA + + N Sbjct: 136 LVGNKIDLAERREVSQQRAEEFSEAQDMYYLETSAKESDNVEKLFLDLACRLISEARQNT 195 Query: 189 LV 190 LV Sbjct: 196 LV 197 >4RKF-A nrPDB Length = 190 Score = 231 bits (590), Expect = 1e-61, Method: Composition-based stats. Identities = 86/179 (48%), Positives = 128/179 (71%), Gaps = 1/179 (0%) Query: 9 ASSGNGKSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKK 68 +++D + K+L+IG+S VGK+ L R+ +D F +F++T+GIDFK+KTV + K+ Sbjct: 12 QKDAADQNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKR 71 Query: 69 VKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQL 128 VKLQ+WDTAG ER+RTITTAYYRGAMG IL+YDVT+E +F +++ W + ++ D AQ+ Sbjct: 72 VKLQIWDTAGLERYRTITTAYYRGAMGFILMYDVTNEDSFNSVQDWVTQIKTYSWDNAQV 131 Query: 129 LLVGNKSDME-TRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEKIDS 186 +LVGNK DME RV++ ++G LA +LG+ F E+SAK + NV +F L +I +K+ Sbjct: 132 ILVGNKCDMEDQRVISFERGRQLADQLGVEFFETSAKENVNVKAVFERLVDIICDKMSE 190 >2O52-A nrPDB Length = 200 Score = 230 bits (588), Expect = 3e-61, Method: Composition-based stats. Identities = 77/177 (43%), Positives = 109/177 (61%), Gaps = 1/177 (0%) Query: 18 DSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTA 77 D + K L+IG +G GKSCLL +F+E+KF TIG++F + V++ GK VKLQ+WDTA Sbjct: 23 DFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWDTA 82 Query: 78 GQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSDM 137 GQERFR++T +YYRGA G +LVYD+T T+ ++ W A+ ++L GNK D+ Sbjct: 83 GQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVILCGNKKDL 142 Query: 138 -ETRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEKIDSNKLVGVG 193 R VT + A+E + F+E+SA +NV E F A+ I KIDS +L Sbjct: 143 DPEREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTILNKIDSGELDPER 199 >2BMD-A nrPDB Length = 186 Score = 230 bits (588), Expect = 3e-61, Method: Composition-based stats. Identities = 78/184 (42%), Positives = 113/184 (61%), Gaps = 1/184 (0%) Query: 13 NGKSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQ 72 ++YD + K L+IG++G GKSCLL +F+E KF TIG++F K +++ GK VKLQ Sbjct: 3 MSETYDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQ 62 Query: 73 LWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVG 132 +WDTAGQERFR++T +YYRGA G +LVYD+T T+ + W A+ ++L G Sbjct: 63 IWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVIILCG 122 Query: 133 NKSDME-TRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEKIDSNKLVG 191 NK D++ R VT + A+E + F+E+SA +NV E F A+ I KI+S +L Sbjct: 123 NKKDLDADREVTFLEASRFAQENELMFLETSALTGENVEEAFVQCARKILNKIESGELDP 182 Query: 192 VGNG 195 G Sbjct: 183 ERMG 186 >1Z0F-A nrPDB Length = 179 Score = 228 bits (582), Expect = 1e-60, Method: Composition-based stats. Identities = 75/175 (42%), Positives = 113/175 (64%), Gaps = 1/175 (0%) Query: 9 ASSGNGKSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKK 68 S+ +Y I K ++IGD GVGKSCLL +F E KF TIG++F + ++++G+K Sbjct: 4 GSATAPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQK 63 Query: 69 VKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQL 128 +KLQ+WDTAGQERFR +T +YYRGA G ++VYD+T T+ ++ W N + Sbjct: 64 IKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVI 123 Query: 129 LLVGNKSDME-TRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQE 182 +L+GNK+D+E R VT ++ + A+E G+ F+E+SAK +NV + F AK I + Sbjct: 124 ILIGNKADLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIYQ 178 >2G6B-A nrPDB Length = 180 Score = 228 bits (581), Expect = 2e-60, Method: Composition-based stats. Identities = 89/178 (50%), Positives = 127/178 (71%), Gaps = 3/178 (1%) Query: 12 GNGKS-YDSIMKILLIGDSGVGKSCLLVRFVEDKF-NPSFITTIGIDFKIKTVDINGKKV 69 G+G YD K++L+GDSGVGK+CLLVRF + F +FI+T+GIDF+ K +D++G KV Sbjct: 1 GSGVDFYDVAFKVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVLDVDGVKV 60 Query: 70 KLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLL 129 KLQ+WDTAGQERFR++T AYYR A ++L+YDVT++ +F NI+ W ++E+A + L+ Sbjct: 61 KLQMWDTAGQERFRSVTHAYYRDAHALLLLYDVTNKASFDNIQAWLTEIHEYAQHDVALM 120 Query: 130 LVGNKSD-METRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEKIDS 186 L+GNK D RVV + GE LAKE G+PF+E+SAK NV+ F +AK ++ + Sbjct: 121 LLGNKVDSAHERVVKREDGEKLAKEYGLPFMETSAKTGLNVDLAFTAIAKELKRRSMK 178 >1X3S-A nrPDB Length = 195 Score = 227 bits (578), Expect = 4e-60, Method: Composition-based stats. Identities = 87/194 (44%), Positives = 119/194 (61%), Gaps = 5/194 (2%) Query: 7 VSASSGNGKSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDING 66 S SSG + + +KIL+IG+SGVGKS LL+RF +D F+P TIG+DFK+KT+ ++G Sbjct: 2 SSGSSGMDEDVLTTLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDG 61 Query: 67 KKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEA 126 K KL +WDTAGQERFRT+T +YYRGA G+ILVYDVT TF + W + + Sbjct: 62 NKAKLAIWDTAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRND 121 Query: 127 QL-LLVGNKSDMETRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEKI- 184 + +LVGNK D E R V ++G A++ + FIE+SAK D V F L + I + Sbjct: 122 IVNMLVGNKIDKENREVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPG 181 Query: 185 ---DSNKLVGVGNG 195 N+ G +G Sbjct: 182 LWESENQNSGPSSG 195 >2F7S-A nrPDB Length = 217 Score = 225 bits (574), Expect = 1e-59, Method: Composition-based stats. Identities = 81/189 (42%), Positives = 122/189 (64%), Gaps = 13/189 (6%) Query: 10 SSGNGKSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGK-- 67 G+G YD ++K+L +GDSGVGK+ L R+ ++KFNP FITT+GIDF+ K V N + Sbjct: 16 PRGSG-DYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGP 74 Query: 68 --------KVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVN 119 KV LQLWDTAGQERFR++TTA++R AMG +L++D+T +++F N++ W + Sbjct: 75 NGSSGKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQ 134 Query: 120 EHA-NDEAQLLLVGNKSDME-TRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLA 177 +A + ++L+GNK+D+ R V Q LA + GIP+ E+SA NV + TL Sbjct: 135 ANAYCENPDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLL 194 Query: 178 KLIQEKIDS 186 LI ++++ Sbjct: 195 DLIMKRMEQ 203 >3RWM-B nrPDB Length = 185 Score = 225 bits (573), Expect = 2e-59, Method: Composition-based stats. Identities = 79/183 (43%), Positives = 118/183 (64%), Gaps = 1/183 (0%) Query: 13 NGKSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQ 72 G YD + KI+LIGDSGVGKS LL RF D+FN +TIG++F +T+++ KK+K Q Sbjct: 3 MGYDYDYLFKIVLIGDSGVGKSNLLSRFTTDEFNIESKSTIGVEFATRTIEVENKKIKAQ 62 Query: 73 LWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVG 132 +WDTAG ER+R IT+AYYRGA+G ++VYD++ ++ N W + E+A+D + L+G Sbjct: 63 IWDTAGLERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLTELRENADDNVAVGLIG 122 Query: 133 NKSDM-ETRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEKIDSNKLVG 191 NKSD+ R V D+ + A E + F E+SA N DNV++ F L I + + +++ Sbjct: 123 NKSDLAHLRAVPTDEAKNFAMENQMLFTETSALNSDNVDKAFRELIVAIFQMVSKHQVDL 182 Query: 192 VGN 194 G+ Sbjct: 183 SGS 185 >6HUF-A nrPDB Length = 182 Score = 224 bits (571), Expect = 3e-59, Method: Composition-based stats. Identities = 81/176 (46%), Positives = 124/176 (70%), Gaps = 2/176 (1%) Query: 12 GNGKSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKL 71 G+ YD ++K L +GDSGVGK+ +L ++ + KFN FITT+GIDF+ KT+ N K++KL Sbjct: 1 GSDGDYDYLIKFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKTIYRNDKRIKL 60 Query: 72 QLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHA-NDEAQLLL 130 QLWDTAG ERFR++TTA++R AMG +L++D+T+E +F N++ W + HA ++ ++L Sbjct: 61 QLWDTAGLERFRSLTTAFFRDAMGFLLLFDLTNEESFLNVRNWISQLKTHAYSENPDIVL 120 Query: 131 VGNKSDME-TRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEKID 185 GNKSD+E RVV A + LA+ GIP+ E+SA N N+++ L LI ++++ Sbjct: 121 CGNKSDLEDERVVAAAEARQLAEHYGIPYFETSAANGTNISQAIEMLLDLIMKRME 176 >5XR6-A nrPDB Length = 194 Score = 223 bits (570), Expect = 3e-59, Method: Composition-based stats. Identities = 76/180 (42%), Positives = 112/180 (62%), Gaps = 2/180 (1%) Query: 10 SSGNGKSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKV 69 G+ YD + K++LIGDSGVGKS LL RF +++FN +TIG++F KT + GK V Sbjct: 16 PRGSHM-YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTTKVEGKVV 74 Query: 70 KLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLL 129 K Q+WDTAGQER+R IT+AYYRGA+G +L+YDVT TF N +W + + H + ++ Sbjct: 75 KAQIWDTAGQERYRAITSAYYRGAVGALLIYDVTRHATFENAARWLRELRGHTDPNIVVM 134 Query: 130 LVGNKSDMETRV-VTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEKIDSNK 188 L+GNK D+ V V ++ +A A+ + F+E+SA + NV F + I + + Sbjct: 135 LIGNKCDLRHLVAVKTEEAKAFAERESLYFMETSALDATNVENAFTEVLTQIHKIVSKRS 194 >6IF2-B nrPDB Length = 186 Score = 223 bits (570), Expect = 3e-59, Method: Composition-based stats. Identities = 89/175 (50%), Positives = 124/175 (70%), Gaps = 2/175 (1%) Query: 9 ASSGNGKSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKK 68 S + YD + K+L+IGDSGVGKS LL+RF ++ F+ S+ITTIG+DFKI+TV+ING+K Sbjct: 3 GSEFMARDYDHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEK 62 Query: 69 VKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQL 128 VKLQ+WDTAG ERFRTIT+ YYRG G+I+VYDVT +F N+K+W +N++ D+ Sbjct: 63 VKLQIWDTAGLERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNC-DDVCR 121 Query: 129 LLVGNKSDMETR-VVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQE 182 +LVGNK+D R VV + A ++GI E+SAK + NV E+F + +L+ Sbjct: 122 ILVGNKNDDPERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMFNCITELVLR 176 >4G01-B nrPDB Length = 181 Score = 220 bits (561), Expect = 3e-58, Method: Composition-based stats. Identities = 69/175 (39%), Positives = 107/175 (61%), Gaps = 1/175 (0%) Query: 9 ASSGNGKSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKK 68 S + K++L+GD G GKS L++RFV+D+F +TIG F +T+ +N Sbjct: 1 GSMAAAGNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDAT 60 Query: 69 VKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQL 128 VK ++WDTAGQER+ ++ YYRGA I+V+DVT++ +F K+W + + N + Sbjct: 61 VKFEIWDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVM 120 Query: 129 LLVGNKSD-METRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQE 182 L GNKSD ++ R VTA+ + A+E G+ F+E+SAK NV EIF+ +A+ + Sbjct: 121 ALAGNKSDLLDARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRLPR 175 >2HEI-A nrPDB Length = 179 Score = 220 bits (560), Expect = 5e-58, Method: Composition-based stats. Identities = 65/168 (38%), Positives = 106/168 (63%), Gaps = 1/168 (0%) Query: 21 MKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQE 80 K++L+G+S VGKS L++RFV+ +F+ +TIG F ++V ++ VK ++WDTAGQE Sbjct: 9 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQE 68 Query: 81 RFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSDMET- 139 R+ ++ YYRGA I+VYD+T++ TF K W K + A+ + L GNK+D+ Sbjct: 69 RYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLANK 128 Query: 140 RVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEKIDSN 187 R+V ++ +A A + + F+E+SAK NVN++F +AK + + N Sbjct: 129 RMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSEPQN 176 >2IL1-A nrPDB Length = 192 Score = 219 bits (559), Expect = 6e-58, Method: Composition-based stats. Identities = 86/177 (48%), Positives = 131/177 (74%), Gaps = 2/177 (1%) Query: 10 SSGNGKSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKV 69 G+ + D +++++IG GVGK+ L+ RF +D F + +T+G+DFKIKTV++ GKK+ Sbjct: 16 PRGSPRPADFKLQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRGKKI 75 Query: 70 KLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLL 129 +LQ+WDTAGQERF +IT+AYYR A GIILVYD+T + TF ++ +W K ++++A+++A+LL Sbjct: 76 RLQIWDTAGQERFNSITSAYYRSAKGIILVYDITKKETFDDLPKWMKMIDKYASEDAELL 135 Query: 130 LVGNKSDME-TRVVTADQGEALAKEL-GIPFIESSAKNDDNVNEIFFTLAKLIQEKI 184 LVGNK D E R +T QGE A+++ G+ F E+SAK++ NV+EIF L I +K+ Sbjct: 136 LVGNKLDCETDREITRQQGEKFAQQITGMRFCEASAKDNFNVDEIFLKLVDDILKKM 192 >3TSO-A nrPDB Length = 178 Score = 219 bits (559), Expect = 7e-58, Method: Composition-based stats. Identities = 73/174 (41%), Positives = 113/174 (64%), Gaps = 1/174 (0%) Query: 15 KSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLW 74 + Y+ + K++LIG+SGVGK+ LL RF ++F+ TTIG++F +TV + VK Q+W Sbjct: 5 EDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIW 64 Query: 75 DTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNK 134 DTAG ER+R IT+AYYRGA+G +LV+D+T +T+ +++W K + +HA ++LVGNK Sbjct: 65 DTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNK 124 Query: 135 SDMET-RVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEKIDSN 187 SD+ R V ++ A+ G+ F+E+SA + NV F T+ K I K+ Sbjct: 125 SDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQ 178 >2HUP-A nrPDB Length = 201 Score = 219 bits (558), Expect = 7e-58, Method: Composition-based stats. Identities = 79/179 (44%), Positives = 117/179 (65%), Gaps = 5/179 (2%) Query: 10 SSGNG---KSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDING 66 G+G + YD + K++L+GD+ VGK+C++ RF F+ +TIG+DF +KT++I G Sbjct: 16 PRGSGDPDEQYDFLFKLVLVGDASVGKTCVVQRFKTGAFSERQGSTIGVDFTMKTLEIQG 75 Query: 67 KKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEA 126 K+VKLQ+WDTAGQERFRTIT +YYR A G IL YD+T +F ++ W + V ++A Sbjct: 76 KRVKLQIWDTAGQERFRTITQSYYRSANGAILAYDITKRSSFLSVPHWIEDVRKYAGSNI 135 Query: 127 QLLLVGNKSDM-ETRVVTADQGEALAKELGI-PFIESSAKNDDNVNEIFFTLAKLIQEK 183 LL+GNKSD+ E R V+ + ++LA+ I IE+SAK+ NV E F +A + + Sbjct: 136 VQLLIGNKSDLSELREVSLAEAQSLAEHYDILCAIETSAKDSSNVEEAFLRVATELIMR 194 >2G77-B nrPDB Length = 198 Score = 219 bits (558), Expect = 8e-58, Method: Composition-based stats. Identities = 72/183 (39%), Positives = 110/183 (60%), Gaps = 7/183 (3%) Query: 6 TVSASSGN-GKSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDI 64 VS +SG + I KI++IGDS VGK+CL RF +F TIG+DF+ + VDI Sbjct: 14 AVSGASGCLPPARSRIFKIIVIGDSNVGKTCLTYRFCAGRFPDRTEATIGVDFRERAVDI 73 Query: 65 NGKKVKLQLWDTAGQERFR-TITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHAN 123 +G+++K+QLWDTAGQERFR ++ YYR ++ VYD+T+ +F ++ W + +H Sbjct: 74 DGERIKIQLWDTAGQERFRKSMVQHYYRNVHAVVFVYDMTNMASFHSLPAWIEECKQHLL 133 Query: 124 -DEAQLLLVGNKSDMETR-VVTADQGEALAKELGIPFIESSAK---NDDNVNEIFFTLAK 178 ++ +LVGNK D+ + V D + A +P E+SAK ++D+V IF TLA Sbjct: 134 ANDIPRILVGNKCDLRSAIQVPTDLAQKFADTHSMPLFETSAKNPNDNDHVEAIFMTLAH 193 Query: 179 LIQ 181 ++ Sbjct: 194 KLK 196 >2IEZ-A nrPDB Length = 220 Score = 218 bits (556), Expect = 1e-57, Method: Composition-based stats. Identities = 81/216 (37%), Positives = 126/216 (58%), Gaps = 21/216 (9%) Query: 16 SYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGK-------- 67 YD ++K+L +GDSGVGK+ L R+ ++KFNP FITT+GIDF+ K V + + Sbjct: 7 DYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYDTQGADGASGK 66 Query: 68 --KVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHA-ND 124 KV LQLWDTAG ERFR++TTA++R AMG +L++D+T +++F N++ W + +A + Sbjct: 67 AFKVHLQLWDTAGLERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCE 126 Query: 125 EAQLLLVGNKSDME-TRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEK 183 ++L+GNK+D+ R V Q LA++ GIP+ E+SA NV + TL LI ++ Sbjct: 127 NPDIVLIGNKADLPDQREVNERQARELAEKYGIPYFETSAATGQNVEKSVETLLDLIMKR 186 Query: 184 IDS-----NKLVGVGNGKEGNISINSGSGNSSKSNC 214 ++ V G G + ++ C Sbjct: 187 MEKCVEKTQVPDTVNGGNSGKLD----GEKPAEKKC 218 >2IEY-A nrPDB Length = 195 Score = 217 bits (554), Expect = 2e-57, Method: Composition-based stats. Identities = 77/183 (42%), Positives = 119/183 (65%), Gaps = 12/183 (6%) Query: 16 SYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGK-------- 67 YD ++K+L +GDSGVGK+ L R+ ++KFNP FITT+GIDF+ K V + + Sbjct: 7 DYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYDTQGADGASGK 66 Query: 68 --KVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHA-ND 124 KV LQLWDTAG ERFR++TTA++R AMG +L++D+T +++F N++ W + +A + Sbjct: 67 AFKVHLQLWDTAGLERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCE 126 Query: 125 EAQLLLVGNKSDME-TRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEK 183 ++L+GNK+D+ R V Q LA++ GIP+ E+SA NV + TL LI ++ Sbjct: 127 NPDIVLIGNKADLPDQREVNERQARELAEKYGIPYFETSAATGQNVEKSVETLLDLIMKR 186 Query: 184 IDS 186 ++ Sbjct: 187 MEK 189 >1TU4-A nrPDB Length = 171 Score = 217 bits (554), Expect = 2e-57, Method: Composition-based stats. Identities = 66/163 (40%), Positives = 103/163 (63%), Gaps = 1/163 (0%) Query: 21 MKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQE 80 K++L+G+S VGKS L++RFV+ +F+ +TIG F +TV ++ VK ++WDTAGQE Sbjct: 8 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 67 Query: 81 RFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSDMET- 139 R+ ++ YYRGA I+VYD+T+E +F K W K + A+ + L GNK+D+ Sbjct: 68 RYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANK 127 Query: 140 RVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQE 182 R V + ++ A + + F+E+SAK NVNEIF +AK + + Sbjct: 128 RAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPK 170 >3BFK-A nrPDB Length = 181 Score = 216 bits (551), Expect = 5e-57, Method: Composition-based stats. Identities = 82/179 (45%), Positives = 115/179 (64%), Gaps = 2/179 (1%) Query: 14 GKSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDI-NGKKVKLQ 72 G YD + KI+LIGDSGVGKS LL RF D+FN +TIG++F K++ + N K +K Q Sbjct: 1 GDYYDYLFKIVLIGDSGVGKSNLLSRFTRDEFNLESKSTIGVEFATKSIQLKNNKIIKAQ 60 Query: 73 LWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVG 132 +WDTAGQER+R IT+AYYRGA+G +LVYD+T + +F NI++W K + ++A+ +LLVG Sbjct: 61 IWDTAGQERYRAITSAYYRGAVGALLVYDITKKNSFENIEKWLKELRDNADSNIVILLVG 120 Query: 133 NKSDMET-RVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEKIDSNKLV 190 NKSD++ RV+ + AK+ + FIE+SA NV F L I + Sbjct: 121 NKSDLKHLRVINDNDATQYAKKEKLAFIETSALEATNVELAFHQLLNEIYNVRQKKQAT 179 >3BC1-A nrPDB Length = 195 Score = 216 bits (550), Expect = 8e-57, Method: Composition-based stats. Identities = 76/185 (41%), Positives = 121/185 (65%), Gaps = 12/185 (6%) Query: 13 NGKSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDIN------- 65 + YD ++K L +GDSGVGK+ +L ++ + KFN FITT+GIDF+ K V Sbjct: 4 SDGDYDYLIKFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKRVVYRANGPDGA 63 Query: 66 ---GKKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHA 122 G+++ LQLWDTAG ERFR++TTA++R AMG +L++D+T+E++F N++ W + HA Sbjct: 64 VGRGQRIHLQLWDTAGLERFRSLTTAFFRDAMGFLLLFDLTNEQSFLNVRNWISQLQMHA 123 Query: 123 -NDEAQLLLVGNKSDME-TRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLI 180 ++ ++L GNKSD+E R V ++ LA++ GIP+ E+SA N N++ L LI Sbjct: 124 YSENPDIVLCGNKSDLEDQRAVKEEEARELAEKYGIPYFETSAANGTNISHAIEMLLDLI 183 Query: 181 QEKID 185 ++++ Sbjct: 184 MKRME 188 >4KYI-B nrPDB Length = 170 Score = 216 bits (550), Expect = 8e-57, Method: Composition-based stats. Identities = 68/170 (40%), Positives = 102/170 (60%), Gaps = 1/170 (0%) Query: 12 GNGKSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKL 71 G S K++L+G+S VGKS L++RFV+ +F+ +TIG F +TV ++ VK Sbjct: 1 GAMGSKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKF 60 Query: 72 QLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLV 131 ++WDTAG ER+ ++ YYRGA I+VYD+T+ TF K W K + A+ + L Sbjct: 61 EIWDTAGLERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALA 120 Query: 132 GNKSDM-ETRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLI 180 GNK+D+ R V + +A A + + F+E+SAK NVNEIF +AK + Sbjct: 121 GNKADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKL 170 >1Z06-A nrPDB Length = 189 Score = 215 bits (549), Expect = 9e-57, Method: Composition-based stats. Identities = 69/172 (40%), Positives = 105/172 (61%), Gaps = 6/172 (3%) Query: 16 SYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWD 75 S I KI++IGDS VGK+CL RF +F TIG+DF+ + VDI+G+++K+QLWD Sbjct: 16 SRSRIFKIIVIGDSNVGKTCLTYRFCAGRFPDRTEATIGVDFRERAVDIDGERIKIQLWD 75 Query: 76 TAGQERFR-TITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHAN-DEAQLLLVGN 133 TAGQERFR ++ YYR ++ VYD+T+ +F ++ W + +H ++ +LVGN Sbjct: 76 TAGQERFRKSMVQHYYRNVHAVVFVYDMTNMASFHSLPAWIEECKQHLLANDIPRILVGN 135 Query: 134 KSDMETR-VVTADQGEALAKELGIPFIESSAK---NDDNVNEIFFTLAKLIQ 181 K D+ + V D + A +P E+SAK ++D+V IF TLA ++ Sbjct: 136 KCDLRSAIQVPTDLAQKFADTHSMPLFETSAKNPNDNDHVEAIFMTLAHKLK 187 >2FG5-A nrPDB Length = 192 Score = 213 bits (544), Expect = 3e-56, Method: Composition-based stats. Identities = 62/163 (38%), Positives = 99/163 (60%), Gaps = 1/163 (0%) Query: 19 SIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAG 78 +K+ L+GD+GVGKS ++ RFV+D F+ + TIG F KTV + K +WDTAG Sbjct: 22 RELKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAG 81 Query: 79 QERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSDM- 137 QERF ++ YYRG+ ++VYD+T + +F +K+W K + EH + + + GNK D+ Sbjct: 82 QERFHSLAPMYYRGSAAAVIVYDITKQDSFYTLKKWVKELKEHGPENIVMAIAGNKCDLS 141 Query: 138 ETRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLI 180 + R V + A+ +G +E+SAKN N+ E+F +++ I Sbjct: 142 DIREVPLKDAKEYAESIGAIVVETSAKNAINIEELFQGISRQI 184 >1EK0-A nrPDB Length = 170 Score = 213 bits (543), Expect = 5e-56, Method: Composition-based stats. Identities = 69/167 (41%), Positives = 105/167 (62%), Gaps = 4/167 (2%) Query: 21 MKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQE 80 +K++L+G++ VGKS +++RFV + F + TIG F + V IN VK ++WDTAGQE Sbjct: 4 IKLVLLGEAAVGKSSIVLRFVSNDFAENKEPTIGAAFLTQRVTINEHTVKFEIWDTAGQE 63 Query: 81 RFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSDMET- 139 RF ++ YYR A ++VYDVT ++F + W K ++E A+ + + LVGNK DM Sbjct: 64 RFASLAPMYYRNAQAALVVYDVTKPQSFIKARHWVKELHEQASKDIIIALVGNKIDMLQE 123 Query: 140 ---RVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEK 183 R V ++GE LA+E G+ F E+SAK +NVN++F + + I K Sbjct: 124 GGERKVAREEGEKLAEEKGLLFFETSAKTGENVNDVFLGIGEKIPLK 170 >1YVD-A nrPDB Length = 169 Score = 212 bits (540), Expect = 9e-56, Method: Composition-based stats. Identities = 67/163 (41%), Positives = 99/163 (60%), Gaps = 1/163 (0%) Query: 19 SIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAG 78 +K+ L+GD+GVGKS ++ RFVED F+P+ TIG F KTV + K +WDTAG Sbjct: 4 RELKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAG 63 Query: 79 QERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSDM- 137 QERFR + YYRG+ I+VYD+T E TF+ +K W + + +H + + GNK D+ Sbjct: 64 QERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVRELRQHGPPSIVVAIAGNKCDLT 123 Query: 138 ETRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLI 180 + R V + A + F+E+SAKN N+NE+F +++ I Sbjct: 124 DVREVMERDAKDYADSIHAIFVETSAKNAININELFIEISRRI 166 >1WMS-A nrPDB Length = 177 Score = 212 bits (540), Expect = 1e-55, Method: Composition-based stats. Identities = 61/170 (35%), Positives = 103/170 (60%), Gaps = 5/170 (2%) Query: 17 YDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDT 76 S+ K++L+GD GVGKS L+ R+V +KF+ TIG++F K ++++G V +Q+WDT Sbjct: 4 KSSLFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDT 63 Query: 77 AGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHA----NDEAQLLLVG 132 AGQERFR++ T +YRG+ +L + V D ++F N+ W K +A + +++G Sbjct: 64 AGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILG 123 Query: 133 NKSDMETRVVTADQGEALAKELG-IPFIESSAKNDDNVNEIFFTLAKLIQ 181 NK D+ R V+ ++ +A ++ G P+ E+SAK+ NV F + + Sbjct: 124 NKIDISERQVSTEEAQAWCRDNGDYPYFETSAKDATNVAAAFEEAVRRVL 173 >4QXA-A nrPDB Length = 208 Score = 211 bits (538), Expect = 2e-55, Method: Composition-based stats. Identities = 64/177 (36%), Positives = 107/177 (60%), Gaps = 5/177 (2%) Query: 17 YDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDT 76 S+ KI+L+GD GVGKS L+ R+V +KF+ TIG++F K ++++G V +Q+WDT Sbjct: 5 KSSLFKIILLGDGGVGKSSLMNRYVTNKFDSQLFHTIGVEFLNKDLEVDGHFVTMQIWDT 64 Query: 77 AGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHA----NDEAQLLLVG 132 AG ERFR++ T +YRG+ +L + V D ++F N+ W K +A + +++G Sbjct: 65 AGLERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILG 124 Query: 133 NKSDMETRVVTADQGEALAKELG-IPFIESSAKNDDNVNEIFFTLAKLIQEKIDSNK 188 NK+D++ R V+ ++ +A K+ G P+ E+SAK+ NV F + I D ++ Sbjct: 125 NKTDIKERQVSTEEAQAWCKDNGDYPYFETSAKDSTNVAAAFEEAVRRILATEDRSE 181 >2OCB-A nrPDB Length = 180 Score = 209 bits (533), Expect = 7e-55, Method: Composition-based stats. Identities = 67/175 (38%), Positives = 109/175 (62%), Gaps = 7/175 (4%) Query: 12 GNGKSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKL 71 G+GKS ++K++L+GD GVGKS L+ R+V +KF+ TIG++F + ++++G+ V L Sbjct: 1 GSGKS--LLLKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFVTL 58 Query: 72 QLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHA----NDEAQ 127 Q+WDTAGQERF+++ T +YRGA +L + V D ++F N+ W K +A + Sbjct: 59 QIWDTAGQERFKSLRTPFYRGADCCLLTFSVDDRQSFENLGNWQKEFIYYADVKDPEHFP 118 Query: 128 LLLVGNKSDMETRVVTADQGEALAKELG-IPFIESSAKNDDNVNEIFFTLAKLIQ 181 +++GNK D E R VT ++ + E G P++E+SAK+D NV F + + Sbjct: 119 FVVLGNKVDKEDRQVTTEEAQTWCMENGDYPYLETSAKDDTNVTVAFEEAVRQVL 173 >2FFQ-A nrPDB Length = 171 Score = 208 bits (531), Expect = 1e-54, Method: Composition-based stats. Identities = 66/163 (40%), Positives = 105/163 (64%), Gaps = 1/163 (0%) Query: 21 MKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQE 80 K++ +G+ VGK+ L+ RF+ D F+ ++ TIGIDF KT+ + + V+LQLWDTAGQE Sbjct: 3 FKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 62 Query: 81 RFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSDM-ET 139 RFR++ +Y R + ++VYD+T+ +F +W V + ++LVGNK+D+ + Sbjct: 63 RFRSLIPSYIRDSTVAVVVYDITNLNSFQQTSKWIDDVRTERGSDVIIMLVGNKTDLADK 122 Query: 140 RVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQE 182 R +T ++GE AKEL + FIE+SAK NV ++F +A + E Sbjct: 123 RQITIEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVASALLE 165 >5CM8-B nrPDB Length = 203 Score = 208 bits (530), Expect = 1e-54, Method: Composition-based stats. Identities = 58/194 (29%), Positives = 111/194 (57%), Gaps = 6/194 (3%) Query: 6 TVSASSGNGKSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDIN 65 ++S G ++ K++++G GVGKS L ++F+ D+F + T ++ K V ++ Sbjct: 2 SMSKKPTAGP---ALHKVIMVGSGGVGKSALTLQFMYDEFVEDYEPTKADSYRKKVV-LD 57 Query: 66 GKKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDE 125 G++V++ + DTAGQE + I Y+R G + V+ +TD+ +F +++ + + NDE Sbjct: 58 GEEVQIDILDTAGQEDYAAIRDNYFRSGEGFLCVFSITDDESFQATQEFREQILRVKNDE 117 Query: 126 -AQLLLVGNKSDM-ETRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEK 183 LLVGNK D+ + R V + + A++ +P++E+SAK +NV+++FF L + I+ + Sbjct: 118 SIPFLLVGNKCDLNDKRKVPLSECQLRAQQWAVPYVETSAKTRENVDKVFFDLMREIRSR 177 Query: 184 IDSNKLVGVGNGKE 197 + G K+ Sbjct: 178 KTEDSKATSGRAKD 191 >1YZU-A nrPDB Length = 170 Score = 208 bits (530), Expect = 2e-54, Method: Composition-based stats. Identities = 69/168 (41%), Positives = 103/168 (61%), Gaps = 1/168 (0%) Query: 16 SYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWD 75 S K++L+G+ VGK+ L++R+ E+KFN ITT+ F K ++I GK+V L +WD Sbjct: 2 SRAYSFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWD 61 Query: 76 TAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNKS 135 TAGQERF + YYR + G ILVYD+TDE +F +K W K + + +E L +VGNK Sbjct: 62 TAGQERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKI 121 Query: 136 DME-TRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQE 182 D+E R V+ + E+ A+ +G +SAK + + E+F L K + E Sbjct: 122 DLEKERHVSIQEAESYAESVGAKHYHTSAKQNKGIEELFLDLCKRMIE 169 >1D5C-A nrPDB Length = 162 Score = 207 bits (527), Expect = 3e-54, Method: Composition-based stats. Identities = 61/161 (37%), Positives = 101/161 (62%), Gaps = 1/161 (0%) Query: 21 MKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQE 80 K++ +G+ VGK+ ++ RF+ D F+ ++ +TIGIDF KT+ ++ V+LQLWDTAGQE Sbjct: 2 YKLVFLGEQAVGKTSIITRFMYDTFDNNYQSTIGIDFLSKTLYLDEGPVRLQLWDTAGQE 61 Query: 81 RFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSDM-ET 139 RFR++ +Y R + I+VYD+T+ ++F N +W + + + + LVGNK+D+ + Sbjct: 62 RFRSLIPSYIRDSAAAIVVYDITNRQSFENTTKWIQDILNERGKDVIIALVGNKTDLGDL 121 Query: 140 RVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLI 180 R VT ++G A+E F E+SAK N+ +F A + Sbjct: 122 RKVTYEEGMQKAQEYNTMFHETSAKAGHNIKVLFKKTASKL 162 >5C2K-A nrPDB Length = 415 Score = 206 bits (525), Expect = 6e-54, Method: Composition-based stats. Identities = 52/197 (26%), Positives = 95/197 (48%), Gaps = 15/197 (7%) Query: 9 ASSGNGKSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKK 68 SSG+ K++++GD GK+CLL+ F +D+F ++ T+ ++ + ++++GK+ Sbjct: 1 GSSGSSGMAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY-VADIEVDGKQ 59 Query: 69 VKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQL 128 V+L LWDTAGQE + + Y I++ + + + NI + + +H + Sbjct: 60 VELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPI 119 Query: 129 LLVGNKSDMETRV-------------VTADQGEALAKELG-IPFIESSAKNDDNVNEIFF 174 +LVGNK D+ V ++G +A +G ++E SAK D V E+F Sbjct: 120 ILVGNKKDLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFE 179 Query: 175 TLAKLIQEKIDSNKLVG 191 + + K G Sbjct: 180 MATRAALQARRGKKKSG 196 >4KLZ-A nrPDB Length = 173 Score = 205 bits (523), Expect = 9e-54, Method: Composition-based stats. Identities = 55/168 (32%), Positives = 95/168 (56%), Gaps = 3/168 (1%) Query: 18 DSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTA 77 K++++G GVGKS + ++F+ +F TI +KI+ + I+ + L + DTA Sbjct: 3 SREYKLVMLGAGGVGKSAMTMQFISHRFPEDHDPTIEDAYKIR-IRIDDEPANLDILDTA 61 Query: 78 GQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTV-NEHANDEAQLLLVGNKSD 136 GQ F + Y R G I+ Y +TD R+F ++++ + + D+ ++LVGNKSD Sbjct: 62 GQAEFTAMRDQYMRAGEGFIICYSITDRRSFHEVREFKQLIYRVRRTDDTPVVLVGNKSD 121 Query: 137 MET-RVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEK 183 ++ R VT ++G ALA+E PF E+SA ++++F L + I+ K Sbjct: 122 LKQLRQVTKEEGLALAREFSCPFFETSAAYRYYIDDVFHALVREIRRK 169 >2GIL-A nrPDB Length = 162 Score = 204 bits (520), Expect = 2e-53, Method: Composition-based stats. Identities = 65/158 (41%), Positives = 103/158 (65%), Gaps = 1/158 (0%) Query: 21 MKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQE 80 K++ +G+ VGK+ L+ RF+ D F+ ++ TIGIDF KT+ + + V+LQLWDTAGQE Sbjct: 2 FKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 61 Query: 81 RFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSDM-ET 139 RFR++ +Y R + ++VYD+T+ +F +W V + ++LVGNK+D+ + Sbjct: 62 RFRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTDLADK 121 Query: 140 RVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLA 177 R V+ ++GE AKEL + FIE+SAK NV ++F +A Sbjct: 122 RQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVA 159 >5LEF-A nrPDB Length = 191 Score = 204 bits (519), Expect = 3e-53, Method: Composition-based stats. Identities = 65/167 (38%), Positives = 104/167 (62%), Gaps = 1/167 (0%) Query: 12 GNGKSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKL 71 G + K++ +G+ VGK+ L+ RF+ D F+ ++ TIGIDF KT+ + + V+L Sbjct: 1 GAMGNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRL 60 Query: 72 QLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLV 131 QLWDTAG ERFR++ +Y R + ++VYD+T+ +F +W V + ++LV Sbjct: 61 QLWDTAGLERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLV 120 Query: 132 GNKSDM-ETRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLA 177 GNK+D+ + R V+ ++GE AKEL + FIE+SAK NV ++F +A Sbjct: 121 GNKTDLADKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVA 167 >5YOZ-A nrPDB Length = 177 Score = 204 bits (519), Expect = 3e-53, Method: Composition-based stats. Identities = 66/158 (41%), Positives = 104/158 (65%), Gaps = 2/158 (1%) Query: 22 KILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQER 81 KI+++G+SG GKS + +RF ++F + TTIG F KTV I+G+ +K ++WDTAG ER Sbjct: 17 KIVMLGESGAGKSSIALRFTRNEFLANQETTIGAAFLSKTVMIDGRALKYEIWDTAGLER 76 Query: 82 FRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSDM-ETR 140 FR++ YYRGA G ++VYD+T+ + + W K + +A+ ++LVGNK D+ R Sbjct: 77 FRSLAPIYYRGASGALVVYDITNSESLKKAQTWIKELRANADPSLIIVLVGNKKDLGSLR 136 Query: 141 VVTADQGEAL-AKELGIPFIESSAKNDDNVNEIFFTLA 177 V+ + G+ L A+E F E+SAK+++NV ++F LA Sbjct: 137 QVSFEDGQRLAAEEQLAAFYEASAKDNNNVEQVFLDLA 174 >2P5S-A nrPDB Length = 199 Score = 203 bits (517), Expect = 4e-53, Method: Composition-based stats. Identities = 74/183 (40%), Positives = 118/183 (64%), Gaps = 9/183 (4%) Query: 10 SSGNGKSYDS--IMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGK 67 G+ KS+ S KI+L GD+ VGKS L+R +++F + T+G+DF++KT+ ++G+ Sbjct: 16 PRGSAKSFSSQKAYKIVLAGDAAVGKSSFLMRLCKNEFRENISATLGVDFQMKTLIVDGE 75 Query: 68 KVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQ 127 + LQLWDTAGQERFR+I +Y+R A G++L+YDVT E++F NI++W + + A++ Sbjct: 76 RTVLQLWDTAGQERFRSIAKSYFRKADGVLLLYDVTCEKSFLNIREWVDMIEDAAHETVP 135 Query: 128 LLLVGNKSDMETRVVTADQ-------GEALAKELGIPFIESSAKNDDNVNEIFFTLAKLI 180 ++LVGNK+D+ T Q GE LA G F E+SAK+ N+ E LA+ + Sbjct: 136 IMLVGNKADIRDTAATEGQKCVPGHFGEKLAMTYGALFCETSAKDGSNIVEAVLHLAREV 195 Query: 181 QEK 183 +++ Sbjct: 196 KKR 198 >5JCP-B nrPDB Length = 419 Score = 203 bits (516), Expect = 6e-53, Method: Composition-based stats. Identities = 52/192 (27%), Positives = 94/192 (48%), Gaps = 16/192 (8%) Query: 6 TVSASSG-NGKSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDI 64 T S S G G S K++++GD GK+CLL+ +D+F ++ T+ ++ + +++ Sbjct: 228 TASNSPGIEGLSAAIRKKLVIVGDGACGKTCLLIVNSKDQFPEVYVPTVFENY-VADIEV 286 Query: 65 NGKKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHAND 124 +GK+V+L LWDTAGQE + + Y I++ + + + NI + + +H Sbjct: 287 DGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCP 346 Query: 125 EAQLLLVGNKSDMETRV-------------VTADQGEALAKELG-IPFIESSAKNDDNVN 170 ++LVGNK D+ V ++G +A +G ++E SAK D V Sbjct: 347 NVPIILVGNKKDLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVR 406 Query: 171 EIFFTLAKLIQE 182 E+F + + Sbjct: 407 EVFEMATRAALQ 418 >6IYB-A nrPDB Length = 199 Score = 202 bits (514), Expect = 1e-52, Method: Composition-based stats. Identities = 63/183 (34%), Positives = 103/183 (56%), Gaps = 6/183 (3%) Query: 12 GNGKSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKL 71 G+ ++K++++GDSGVGK+ L+ ++V KF+ + TIG DF K V ++ + V + Sbjct: 5 GSTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTM 64 Query: 72 QLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVN----EHANDEAQ 127 Q+WDTAG ERF++ A+YRGA +LV+DVT TF + W + Sbjct: 65 QIWDTAGLERFQS-GVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFP 123 Query: 128 LLLVGNKSDMETRVVTADQGEALA-KELGIPFIESSAKNDDNVNEIFFTLAKLIQEKIDS 186 +++GNK D+E R V + +A + IP+ E+SAK NV + F T+A+ ++ Sbjct: 124 FVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETE 183 Query: 187 NKL 189 +L Sbjct: 184 VEL 186 >5ZHX-e nrPDB Length = 198 Score = 201 bits (511), Expect = 2e-52, Method: Composition-based stats. Identities = 49/184 (26%), Positives = 91/184 (49%), Gaps = 15/184 (8%) Query: 22 KILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQER 81 K++++GD GK+CLL+ F +D+F ++ T+ ++ + ++++GK+V+L LWDTAGQE Sbjct: 12 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQED 70 Query: 82 FRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSDMETRV 141 + + Y I++ + + + NI + + +H ++LVGNK D+ Sbjct: 71 YDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDE 130 Query: 142 -------------VTADQGEALAKELG-IPFIESSAKNDDNVNEIFFTLAKLIQEKIDSN 187 V ++G +A +G ++E SAK D V E+F + + Sbjct: 131 HTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQARRGK 190 Query: 188 KLVG 191 K G Sbjct: 191 KKSG 194 >2J0V-A nrPDB Length = 212 Score = 199 bits (506), Expect = 9e-52, Method: Composition-based stats. Identities = 58/189 (30%), Positives = 99/189 (52%), Gaps = 13/189 (6%) Query: 12 GNGKSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKL 71 G+ S +K + +GD VGK+C+L+ + +KF +I T+ +F V ++G+ V L Sbjct: 1 GSHMSVSKFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFS-ANVAVDGQIVNL 59 Query: 72 QLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNI-KQWFKTVNEHANDEAQLLL 130 LWDTAGQE + + YRGA +L + + + ++ N+ K+W + A ++L Sbjct: 60 GLWDTAGQEDYSRLRPLSYRGADIFVLAFSLISKASYENVLKKWMPELRRFAP-NVPIVL 118 Query: 131 VGNKSDMETR---------VVTADQGEALAKELG-IPFIESSAKNDDNVNEIFFTLAKLI 180 VG K D+ V+T+ QGE L K++G +IE S+K NV +F T K++ Sbjct: 119 VGTKLDLRDDKGYLADHTNVITSTQGEELRKQIGAAAYIECSSKTQQNVKAVFDTAIKVV 178 Query: 181 QEKIDSNKL 189 + ++ Sbjct: 179 LQPPRRKEV 187 >5LDD-C nrPDB Length = 207 Score = 198 bits (503), Expect = 2e-51, Method: Composition-based stats. Identities = 62/179 (34%), Positives = 107/179 (59%), Gaps = 7/179 (3%) Query: 20 IMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQ 79 ++K++++GDSGVGK+ L+ ++V KF+ S+ TIG DF + V ++ ++V +QLWDTAGQ Sbjct: 10 LLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTREVMVDDRQVTMQLWDTAGQ 69 Query: 80 ERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVN----EHANDEAQLLLVGNKS 135 ERF+++ A+YRGA +LV+DV + ++F + W + +++G K Sbjct: 70 ERFQSLGVAFYRGADCCVLVFDVNNAKSFDALDSWRDEFLIQASPRDPENFPFVVLGIKI 129 Query: 136 DMET--RVVTADQGEALAKEL-GIPFIESSAKNDDNVNEIFFTLAKLIQEKIDSNKLVG 191 D+E RV++ + + + GIP+ E+SAK NV E F +A+ + +S + G Sbjct: 130 DVEESKRVISTKRAQTFCQSKGGIPYFETSAKEAINVEEAFQVIARNALMQEESEEFSG 188 >4M8N-E nrPDB Length = 199 Score = 197 bits (501), Expect = 4e-51, Method: Composition-based stats. Identities = 60/167 (35%), Positives = 99/167 (59%), Gaps = 4/167 (2%) Query: 17 YDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDT 76 + K++++G GVGKS L V+FV+ F + TI ++ K V+++ ++ L++ DT Sbjct: 3 HMREYKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYR-KQVEVDAQQCMLEILDT 61 Query: 77 AGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTV-NEHANDEAQLLLVGNKS 135 AG E+F + Y + G LVY +T + TF +++ + + D+ ++LVGNK Sbjct: 62 AGTEQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTDDVPMILVGNKC 121 Query: 136 DME-TRVVTADQGEALAKEL-GIPFIESSAKNDDNVNEIFFTLAKLI 180 D+E RVV +QG+ LA++ F+ESSAK+ NVNEIF+ L + I Sbjct: 122 DLEDERVVGKEQGQNLARQWNNCAFLESSAKSKINVNEIFYDLVRQI 168 >2KE5-A nrPDB Length = 174 Score = 196 bits (499), Expect = 5e-51, Method: Composition-based stats. Identities = 58/174 (33%), Positives = 107/174 (61%), Gaps = 5/174 (2%) Query: 19 SIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAG 78 ++ K++++G GVGKS L ++F+ D+F + T ++ K V ++G++V++ + DTAG Sbjct: 2 ALHKVIMVGSGGVGKSALTLQFMYDEFVEDYEPTKADSYRKKVV-LDGEEVQIDILDTAG 60 Query: 79 QERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEH--ANDEAQLLLVGNKSD 136 E + I Y+R G +LV+ +T+ +FT ++ + + D+ LL+VGNKSD Sbjct: 61 LEDYAAIRDNYFRSGEGFLLVFSITEHESFTATAEFREQILRVKAEEDKIPLLVVGNKSD 120 Query: 137 MET-RVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQ-EKIDSNK 188 +E R V ++ + A+E G+ ++E+SAK NV+++FF L + I+ +K+ NK Sbjct: 121 LEERRQVPVEEARSKAEEWGVQYVETSAKTRANVDKVFFDLMREIRTKKMSENK 174 >3TH5-A nrPDB Length = 204 Score = 195 bits (497), Expect = 1e-50, Method: Composition-based stats. Identities = 48/178 (26%), Positives = 86/178 (48%), Gaps = 17/178 (9%) Query: 19 SIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAG 78 +K +++GD VGK+CLL+ + + F +I T+ ++ V ++GK V L LWDTAG Sbjct: 29 QAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYS-ANVMVDGKPVNLGLWDTAG 87 Query: 79 QERFRTITTAYYRGAMGIILVYDVTDERTFTNIK-QWFKTVNEHANDEAQLLLVGNKSDM 137 QE + + Y ++ + + +F N++ +W+ V H ++LVG K D+ Sbjct: 88 QEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCP-NTPIILVGTKLDL 146 Query: 138 ETR-------------VVTADQGEALAKELG-IPFIESSAKNDDNVNEIFFTLAKLIQ 181 +T QG A+AKE+G + ++E SA + +F + + Sbjct: 147 RDDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQRGLKTVFDEAIRAVL 204 >1ZC4-A nrPDB Length = 175 Score = 194 bits (494), Expect = 2e-50, Method: Composition-based stats. Identities = 50/172 (29%), Positives = 100/172 (58%), Gaps = 3/172 (1%) Query: 19 SIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAG 78 ++ K++++G GVGKS L ++F+ D+F + T ++ K V ++G++V++ + DTAG Sbjct: 5 ALHKVIMVGSGGVGKSALTLQFMYDEFVEDYEPTKADSYRKKVV-LDGEEVQIDILDTAG 63 Query: 79 QERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTV-NEHANDEAQLLLVGNKSDM 137 E + I Y+R G + V+ +T+ +F + + + ++ LLVGNKSD+ Sbjct: 64 LEDYAAIRDNYFRSGEGFLCVFSITEMESFAATADFREQILRVKEDENVPFLLVGNKSDL 123 Query: 138 ET-RVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEKIDSNK 188 E R V+ ++ + A++ + ++E+SAK NV+++FF L + I+ + + Sbjct: 124 EDKRQVSVEEAKNRAEQWNVNYVETSAKTRANVDKVFFDLMREIRARKMEDS 175 >3RYT-C nrPDB Length = 180 Score = 193 bits (492), Expect = 3e-50, Method: Composition-based stats. Identities = 47/180 (26%), Positives = 86/180 (47%), Gaps = 17/180 (9%) Query: 17 YDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDT 76 + +K +++GD VGK+CLL+ + + F +I T+ ++ V ++GK V L LWDT Sbjct: 3 HMQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYS-ANVMVDGKPVNLGLWDT 61 Query: 77 AGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIK-QWFKTVNEHANDEAQLLLVGNKS 135 AG E + + Y ++ + + +F N++ +W+ V H ++LVG K Sbjct: 62 AGLEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCP-NTPIILVGTKL 120 Query: 136 DMETR-------------VVTADQGEALAKELG-IPFIESSAKNDDNVNEIFFTLAKLIQ 181 D+ +T QG A+AKE+G + ++E SA + +F + + Sbjct: 121 DLRDDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQRGLKTVFDEAIRAVL 180 >2NTY-C nrPDB Length = 180 Score = 192 bits (489), Expect = 8e-50, Method: Composition-based stats. Identities = 55/182 (30%), Positives = 92/182 (50%), Gaps = 15/182 (8%) Query: 15 KSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLW 74 S +K + +GD VGK+C+L+ + + F ++ T+ +F V ++G V L LW Sbjct: 1 MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGNTVNLGLW 59 Query: 75 DTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNI-KQWFKTVNEHANDEAQLLLVGN 133 DTAGQE + + YRGA IL + + + ++ N+ K+W + +A ++LVG Sbjct: 60 DTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAP-GVPIILVGT 118 Query: 134 KSDMETR-----------VVTADQGEALAKELGIP-FIESSAKNDDNVNEIFFTLAKLIQ 181 K D+ +T +QGE L K +G P +IE S+K NV +F K++ Sbjct: 119 KLDLRDDKQFFIDHPGAVPITTNQGEELKKLIGSPIYIECSSKTQQNVKAVFDAAIKVVL 178 Query: 182 EK 183 + Sbjct: 179 QP 180 >2FV8-A nrPDB Length = 207 Score = 192 bits (489), Expect = 8e-50, Method: Composition-based stats. Identities = 54/191 (28%), Positives = 93/191 (48%), Gaps = 20/191 (10%) Query: 12 GNGKSYDSIM---KILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKK 68 G Y M K++++GD GK+CLL+ F +D+F ++ T+ ++ + ++++GK+ Sbjct: 14 GTENLYFQSMIRKKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENY-VADIEVDGKQ 72 Query: 69 VKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQ-WFKTVNEHANDEAQ 127 V+L LWDTAGQE + + Y I++ + V + NI + W V H Sbjct: 73 VELALWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVK-HFCPNVP 131 Query: 128 LLLVGNKSDMETRV-------------VTADQGEALAKEL-GIPFIESSAKNDDNVNEIF 173 ++LV NK D+ + V D G A+A + ++E SAK + V E+F Sbjct: 132 IILVANKKDLRSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVF 191 Query: 174 FTLAKLIQEKI 184 T + +K Sbjct: 192 ETATRAALQKR 202 >2J1L-A nrPDB Length = 214 Score = 192 bits (488), Expect = 1e-49, Method: Composition-based stats. Identities = 55/195 (28%), Positives = 99/195 (50%), Gaps = 17/195 (8%) Query: 8 SASSGNGKSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGK 67 S + +K++L+GD G GK+ LL+ F + F S+ T+ + + + + GK Sbjct: 22 SMAGEEAPPGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMV-NLQVKGK 80 Query: 68 KVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNI-KQWFKTVNEHANDEA 126 V L +WDTAGQ+ + + +Y A ++L +DVT +F NI +W+ VN H + Sbjct: 81 PVHLHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVN-HFCKKV 139 Query: 127 QLLLVGNKSDMETR-------------VVTADQGEALAKELG-IPFIESSAKNDDNVNEI 172 +++VG K+D+ VT +G+ +A+ +G + ++E SA+ DNV+ + Sbjct: 140 PIIVVGCKTDLRKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAV 199 Query: 173 FFTLAKLIQEKIDSN 187 F A++ N Sbjct: 200 FQEAAEVALSSRGRN 214 >4DXA-A nrPDB Length = 169 Score = 191 bits (487), Expect = 1e-49, Method: Composition-based stats. Identities = 60/166 (36%), Positives = 98/166 (59%), Gaps = 4/166 (2%) Query: 18 DSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTA 77 K++++G GVGKS L V+FV+ F + TI ++ K V+++ ++ L++ DTA Sbjct: 3 MREYKLVVLGSVGVGKSALTVQFVQGIFVEKYDPTIEDSYR-KQVEVDAQQCMLEILDTA 61 Query: 78 GQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTV-NEHANDEAQLLLVGNKSD 136 G E+F + Y + G LVY +T + TF +++ + + D+ ++LVGNK D Sbjct: 62 GTEQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTDDVPMILVGNKCD 121 Query: 137 ME-TRVVTADQGEALAKEL-GIPFIESSAKNDDNVNEIFFTLAKLI 180 +E RVV +QG+ LA++ F+ESSAK+ NVNEIF+ L + I Sbjct: 122 LEDERVVGKEQGQNLARQWNNCAFLESSAKSKINVNEIFYDLVRQI 167 >2W2X-A nrPDB Length = 185 Score = 191 bits (486), Expect = 2e-49, Method: Composition-based stats. Identities = 49/185 (26%), Positives = 86/185 (46%), Gaps = 17/185 (9%) Query: 12 GNGKSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKL 71 G G +K +++GD VGK+CLL+ + + F +I T+ ++ V ++ K V L Sbjct: 1 GGGSGGSQAIKCVVVGDVAVGKTCLLISYTTNAFPGEYIPTVFDNYS-ANVMVDSKPVNL 59 Query: 72 QLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIK-QWFKTVNEHANDEAQLLL 130 LWDTAGQE + + Y ++ + + ++ N++ +WF V H ++L Sbjct: 60 GLWDTAGQEDYDRLRPLSYPQTDVFLICFSLVSPASYENVRAKWFPEVRHHCP-STPIIL 118 Query: 131 VGNKSDMET-------------RVVTADQGEALAKEL-GIPFIESSAKNDDNVNEIFFTL 176 VG K D+ +T QG ALAKE+ + ++E SA + +F Sbjct: 119 VGTKLDLRDDKDTIEKLKEKKLAPITYPQGLALAKEIDSVKYLECSALTQRGLKTVFDEA 178 Query: 177 AKLIQ 181 + + Sbjct: 179 IRAVL 183 >4PHF-A nrPDB Length = 184 Score = 191 bits (486), Expect = 2e-49, Method: Composition-based stats. Identities = 74/172 (43%), Positives = 110/172 (63%), Gaps = 8/172 (4%) Query: 20 IMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKV-KLQLWDTAG 78 I+K++++GDSGVGK+ L+ R+V DK++ + TIG DF K V ++G KV +Q+WDTAG Sbjct: 10 ILKVIILGDSGVGKTSLMHRYVNDKYSCQYKATIGADFLTKEVTVDGDKVATMQVWDTAG 69 Query: 79 QERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHAN----DEAQLLLVGNK 134 QERF+++ A+YRGA +LVYDVT+ +F NIK W HAN + +++GNK Sbjct: 70 QERFQSLGVAFYRGADCCVLVYDVTNASSFENIKSWRDEFLVHANVNSPETFPFVILGNK 129 Query: 135 SDMET--RVVTADQGEALAKELG-IPFIESSAKNDDNVNEIFFTLAKLIQEK 183 D E ++V+ + LAK LG IP +SAKN NV+ F +A+ ++ Sbjct: 130 IDAEESKKIVSEKSAQELAKSLGDIPLFLTSAKNAINVDTAFEEIARSALQQ 181 >3WYF-A nrPDB Length = 219 Score = 191 bits (485), Expect = 2e-49, Method: Composition-based stats. Identities = 51/174 (29%), Positives = 92/174 (52%), Gaps = 4/174 (2%) Query: 7 VSASSGNGKSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDING 66 +SA + NG+ K++L+GD G GK+ + R + +F +I TIG++ + N Sbjct: 1 MSAPAANGEV--PTFKLVLVGDGGTGKTTFVKRHLTGEFEKKYIATIGVEVHPLSFYTNF 58 Query: 67 KKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEA 126 ++K +WDTAG E+F + YY A I+++DVT T+ N+ W + + + Sbjct: 59 GEIKFDVWDTAGLEKFGGLRDGYYINAQCAIIMFDVTSRITYKNVPNWHRDLVRVC-ENI 117 Query: 127 QLLLVGNKSDMETRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLI 180 ++L GNK D++ R V A ++ + + + SAK++ N + F LA+ + Sbjct: 118 PIVLCGNKVDVKERKVKAK-TITFHRKKNLQYYDISAKSNYNFEKPFLWLARKL 170 >3BWD-D nrPDB Length = 182 Score = 190 bits (484), Expect = 3e-49, Method: Composition-based stats. Identities = 56/183 (30%), Positives = 93/183 (50%), Gaps = 15/183 (8%) Query: 14 GKSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQL 73 S +K + +GD VGK+CLL+ + + F ++ T+ +F V +NG V L L Sbjct: 2 SMSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VNGATVNLGL 60 Query: 74 WDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNI-KQWFKTVNEHANDEAQLLLVG 132 WDTAGQE + + YRGA IL + + + ++ N+ K+W + +A ++LVG Sbjct: 61 WDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAP-GVPIVLVG 119 Query: 133 NKSDMETR-----------VVTADQGEALAKELGIP-FIESSAKNDDNVNEIFFTLAKLI 180 K D+ +T QGE L K +G P +IE S+K+ +NV +F +++ Sbjct: 120 TKLDLRDDKQFFIDHPGAVPITTVQGEELKKLIGAPAYIECSSKSQENVKGVFDAAIRVV 179 Query: 181 QEK 183 + Sbjct: 180 LQP 182 >4WA7-A nrPDB Length = 170 Score = 190 bits (484), Expect = 4e-49, Method: Composition-based stats. Identities = 47/155 (30%), Positives = 87/155 (56%), Gaps = 2/155 (1%) Query: 33 KSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQERFRTITTAYYRG 92 KS L ++ +++ F + TI ++ K V I+G+ L + DTAG E + + Y R Sbjct: 17 KSALTIQLIQNHFVDEYDPTIEDSYR-KQVVIDGETCLLDILDTAGLEEYSAMRDQYMRT 75 Query: 93 AMGIILVYDVTDERTFTNIKQWFKTVNE-HANDEAQLLLVGNKSDMETRVVTADQGEALA 151 G + V+ + + ++F +I + + + +++ ++LVGNK D+ +R V Q + LA Sbjct: 76 GEGFLCVFAINNTKSFEDIHHYREQIKRVKDSEDVPMVLVGNKCDLPSRTVDTKQAQDLA 135 Query: 152 KELGIPFIESSAKNDDNVNEIFFTLAKLIQEKIDS 186 + GIPFIE+SAK V++ F+TL + I++ + Sbjct: 136 RSYGIPFIETSAKTRQGVDDAFYTLVREIRKHKEK 170 >3CON-A nrPDB Length = 190 Score = 190 bits (483), Expect = 5e-49, Method: Composition-based stats. Identities = 51/156 (32%), Positives = 85/156 (54%), Gaps = 2/156 (1%) Query: 33 KSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQERFRTITTAYYRG 92 KS L ++ +++ F + TI ++ K V I+G+ L + DTAGQE + + Y R Sbjct: 34 KSALTIQLIQNHFVDEYDPTIEDSYR-KQVVIDGETCLLDILDTAGQEEYSAMRDQYMRT 92 Query: 93 AMGIILVYDVTDERTFTNIKQWFKTVNE-HANDEAQLLLVGNKSDMETRVVTADQGEALA 151 G + V+ + + ++F +I + + + +D+ ++LVGNK D+ TR V Q LA Sbjct: 93 GEGFLCVFAINNSKSFADINLYREQIKRVKDSDDVPMVLVGNKCDLPTRTVDTKQAHELA 152 Query: 152 KELGIPFIESSAKNDDNVNEIFFTLAKLIQEKIDSN 187 K GIPFIE+SAK V + F+TL + I++ Sbjct: 153 KSYGIPFIETSAKTRQGVEDAFYTLVREIRQYRMKK 188 >2WBL-C nrPDB Length = 180 Score = 190 bits (482), Expect = 5e-49, Method: Composition-based stats. Identities = 53/182 (29%), Positives = 90/182 (49%), Gaps = 15/182 (8%) Query: 15 KSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLW 74 S +K + +GD VGK+C+L+ + + F ++ T+ +F V ++G V L LW Sbjct: 1 MSTARFIKCVTVGDGAVGKTCMLISYTGNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLW 59 Query: 75 DTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNI-KQWFKTVNEHANDEAQLLLVGN 133 DTAGQE + + YRGA +L + + + ++ NI K+W + +A ++LVG Sbjct: 60 DTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENIHKKWLPELKHYAP-GIPIVLVGT 118 Query: 134 KSDMET-----------RVVTADQGEALAKELG-IPFIESSAKNDDNVNEIFFTLAKLIQ 181 K D+ +T QGE L K +G + ++E S+K NV +F T ++ Sbjct: 119 KLDLRDDKQFLKDHPGAASITTAQGEELRKMIGAVRYLECSSKTQQNVKAVFDTAIRVAL 178 Query: 182 EK 183 Sbjct: 179 RP 180 >2WKQ-A nrPDB Length = 332 Score = 190 bits (482), Expect = 6e-49, Method: Composition-based stats. Identities = 46/183 (25%), Positives = 88/183 (48%), Gaps = 17/183 (9%) Query: 14 GKSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQL 73 ++ ++K +++GD VGK+CLL+ + + F +I T+ ++ V ++GK V L L Sbjct: 149 DEAAKELIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYS-ANVMVDGKPVNLGL 207 Query: 74 WDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIK-QWFKTVNEHANDEAQLLLVG 132 WDTAG E + + Y ++ + + +F +++ +W+ V H ++LVG Sbjct: 208 WDTAGLEDYDRLRPLSYPQTDVFLICFSLVSPASFHHVRAKWYPEVRHHCP-NTPIILVG 266 Query: 133 NKSDMETR-------------VVTADQGEALAKELG-IPFIESSAKNDDNVNEIFFTLAK 178 K D+ +T QG A+AKE+G + ++E SA + +F + Sbjct: 267 TKLDLRDDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQRGLKTVFDEAIR 326 Query: 179 LIQ 181 + Sbjct: 327 AVL 329 >5XOJ-A nrPDB Length = 182 Score = 189 bits (481), Expect = 7e-49, Method: Composition-based stats. Identities = 51/174 (29%), Positives = 92/174 (52%), Gaps = 4/174 (2%) Query: 7 VSASSGNGKSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDING 66 +SA + NG+ K++L+GD G GK+ + R + +F +I TIG++ + N Sbjct: 1 MSAPAANGEV--PTFKLVLVGDGGTGKTTFVKRHLTGEFEKKYIATIGVEVHPLSFYTNF 58 Query: 67 KKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEA 126 ++K +WDTAG E+F + YY A I+++DVT T+ N+ W + + + Sbjct: 59 GEIKFDVWDTAGLEKFGGLRDGYYINAQCAIIMFDVTSRITYKNVPNWHRDLVRVC-ENI 117 Query: 127 QLLLVGNKSDMETRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLI 180 ++L GNK D++ R V A ++ + + + SAK++ N + F LA+ + Sbjct: 118 PIVLCGNKVDVKERKVKAK-TITFHRKKNLQYYDISAKSNYNFEKPFLWLARKL 170 >5UHV-A nrPDB Length = 166 Score = 189 bits (481), Expect = 7e-49, Method: Composition-based stats. Identities = 51/151 (33%), Positives = 85/151 (56%), Gaps = 2/151 (1%) Query: 33 KSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQERFRTITTAYYRG 92 KS L ++ +++ F + TI ++ K V I+G+ L + DTAGQE + + Y R Sbjct: 16 KSALTIQLIQNHFVDEYDPTIEDSYR-KQVVIDGETCLLDILDTAGQEEYSAMRDQYMRT 74 Query: 93 AMGIILVYDVTDERTFTNIKQWFKTVNE-HANDEAQLLLVGNKSDMETRVVTADQGEALA 151 G + V+ + + ++F +I + + + +D+ ++LVGNK D+ TR V Q LA Sbjct: 75 GEGFLCVFAINNSKSFADINLYREQIKRVKDSDDVPMVLVGNKCDLPTRTVDTKQAHELA 134 Query: 152 KELGIPFIESSAKNDDNVNEIFFTLAKLIQE 182 K GIPFIE+SAK V + F+TL + I++ Sbjct: 135 KSYGIPFIETSAKTRQGVEDAFYTLVREIRQ 165 >5WDQ-A nrPDB Length = 170 Score = 189 bits (480), Expect = 9e-49, Method: Composition-based stats. Identities = 49/151 (32%), Positives = 86/151 (56%), Gaps = 2/151 (1%) Query: 33 KSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQERFRTITTAYYRG 92 KS L ++ +++ F + TI ++ K V I+G+ L + DTAGQE + + Y R Sbjct: 20 KSALTIQLIQNHFVDEYDPTIEDSYR-KQVVIDGETCLLDILDTAGQEEYSAMRDQYMRT 78 Query: 93 AMGIILVYDVTDERTFTNIKQWFKTVNE-HANDEAQLLLVGNKSDMETRVVTADQGEALA 151 G + V+ + + ++F +I Q+ + + +D+ ++LVGNK D R V + Q + LA Sbjct: 79 GEGFLCVFAINNTKSFEDIHQYREQIKRVKDSDDVPMVLVGNKCDAAARTVESRQAQDLA 138 Query: 152 KELGIPFIESSAKNDDNVNEIFFTLAKLIQE 182 + GIP+IE+SAK V + F+TL + I++ Sbjct: 139 RSYGIPYIETSAKTRQGVEDAFYTLVREIRQ 169 >2N1B-A nrPDB Length = 261 Score = 188 bits (479), Expect = 1e-48, Method: Composition-based stats. Identities = 47/178 (26%), Positives = 88/178 (49%), Gaps = 2/178 (1%) Query: 3 GLRTVSASSGNGKSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTV 62 R+ + + K++L+GD G GK+ + R + +F ++ T+G++ Sbjct: 34 SSRSAAGTMAAQGEPQVQFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVF 93 Query: 63 DINGKKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHA 122 N +K +WDTAGQE+F + YY A I+++DVT T+ N+ W + + Sbjct: 94 HTNRGPIKFNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDLVRVC 153 Query: 123 NDEAQLLLVGNKSDMETRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLI 180 + ++L GNK D++ R V A ++ + + + SAK++ N + F LA+ + Sbjct: 154 -ENIPIVLCGNKVDIKDRKVKAK-SIVFHRKKNLQYYDISAKSNYNFEKPFLWLARKL 209 >4KU4-A nrPDB Length = 206 Score = 188 bits (477), Expect = 2e-48, Method: Composition-based stats. Identities = 61/200 (30%), Positives = 102/200 (51%), Gaps = 24/200 (12%) Query: 7 VSASSGNGKSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDING 66 ++ S G GK D KI ++G+ GVGK+ L V + F+ ++ T+ ++ + V I+G Sbjct: 4 MALSPGAGKITD---KIAMLGEGGVGKTSLTVNLTKHVFSETYDPTLEDSYRRQCV-IDG 59 Query: 67 KKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTV-------- 118 L++ DTAGQE + + + R ++V+DVT +F ++ F+ V Sbjct: 60 IPSHLEILDTAGQEEYGALREQWIRQNELFVIVFDVTRRSSFEAAERLFEEVIQTKRKLD 119 Query: 119 --NEHANDEAQ---------LLLVGNKSDMET-RVVTADQGEALAKELGIPFIESSAKND 166 H D ++LVGNK D++T R V +G +LAK+LG F+E+SAK Sbjct: 120 ETRRHPGDRHPDDLPFAPSLVVLVGNKCDLDTRREVGTLEGSSLAKKLGCGFVETSAKLG 179 Query: 167 DNVNEIFFTLAKLIQEKIDS 186 NV E FF++ + + + Sbjct: 180 TNVEEAFFSVVRADRRRKRE 199 >4U5X-A nrPDB Length = 178 Score = 188 bits (477), Expect = 2e-48, Method: Composition-based stats. Identities = 54/177 (30%), Positives = 91/177 (51%), Gaps = 15/177 (8%) Query: 19 SIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAG 78 +K + +GD VGK+C+L+ + +KF +I T+ +F V ++G V L LWDTAG Sbjct: 4 RFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFS-ANVSVDGSVVNLGLWDTAG 62 Query: 79 QERFRTITTAYYRGAMGIILVYDVTDERTFTNI-KQWFKTVNEHANDEAQLLLVGNKSDM 137 E + + YRGA IL + + ++ N+ K+W + A ++LVG K D+ Sbjct: 63 LEDYSRLRPLSYRGADVFILSFSLISRASYENVQKKWMPELRRFAP-GVPVVLVGTKLDL 121 Query: 138 ETR-----------VVTADQGEALAKELG-IPFIESSAKNDDNVNEIFFTLAKLIQE 182 ++T +QGE L K +G + +IE S+K N+ +F T K++ + Sbjct: 122 REDRAYLADHPASSIITTEQGEELRKLIGAVAYIECSSKTQRNIKAVFDTAIKVVLQ 178 >1Z22-A nrPDB Length = 168 Score = 187 bits (475), Expect = 3e-48, Method: Composition-based stats. Identities = 62/164 (37%), Positives = 95/164 (57%), Gaps = 2/164 (1%) Query: 21 MKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQE 80 +K++++G+ VGKS ++ R+ + F + TIG+DF + + +N + V+L LWDTAGQE Sbjct: 6 IKMVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQIQVNDEDVRLMLWDTAGQE 65 Query: 81 RFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSD-MET 139 F IT AYYRGA +LV+ TD +F I W + V + LV NK D ++ Sbjct: 66 EFDAITKAYYRGAQACVLVFSTTDRESFEAISSWREKVVAEVG-DIPTALVQNKIDLLDD 124 Query: 140 RVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEK 183 + ++ E LAK L + F +S K D NV+E+F LA+ +K Sbjct: 125 SCIKNEEAEGLAKRLKLRFYRTSVKEDLNVSEVFKYLAEKHLQK 168 >5UWI-A nrPDB Length = 237 Score = 187 bits (475), Expect = 4e-48, Method: Composition-based stats. Identities = 46/160 (28%), Positives = 84/160 (52%), Gaps = 2/160 (1%) Query: 21 MKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQE 80 K++L+GD G GK+ + R + +F ++ T+G++ N +K +WDTAGQE Sbjct: 32 FKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQE 91 Query: 81 RFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSDMETR 140 +F + YY A I+++DVT T+ N+ W + + + ++L GNK D++ R Sbjct: 92 KFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDLVRVC-ENIPIVLCGNKVDIKDR 150 Query: 141 VVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLI 180 V A ++ + + + SAK++ N + F LA+ + Sbjct: 151 KVKAK-SIVFHRKKNLQYYDISAKSNYNFEKPFLWLARKL 189 >5CLL-A nrPDB Length = 191 Score = 187 bits (475), Expect = 4e-48, Method: Composition-based stats. Identities = 46/160 (28%), Positives = 84/160 (52%), Gaps = 2/160 (1%) Query: 21 MKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQE 80 K++L+GD G GK+ + R + +F ++ T+G++ N +K +WDTAGQE Sbjct: 11 FKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQE 70 Query: 81 RFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSDMETR 140 +F + YY A I+++DVT T+ N+ W + + + ++L GNK D++ R Sbjct: 71 KFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDLVRVC-ENIPIVLCGNKVDIKDR 129 Query: 141 VVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLI 180 V A ++ + + + SAK++ N + F LA+ + Sbjct: 130 KVKAK-SIVFHRKKNLQYYDISAKSNYNFEKPFLWLARKL 168 >4FMC-F nrPDB Length = 117 Score = 187 bits (475), Expect = 4e-48, Method: Composition-based stats. Identities = 72/115 (62%), Positives = 99/115 (86%) Query: 23 ILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQERF 82 +LLIGDSGVGKSCLL+RF +D + S+I+TIG+DFKI+T++++GK +KLQ+WDTAGQERF Sbjct: 1 LLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERF 60 Query: 83 RTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSDM 137 RTIT++YYRGA GII+VYDVTD+ +F N+KQW + ++ +A++ LLVGNK D+ Sbjct: 61 RTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDL 115 >2ATX-A nrPDB Length = 194 Score = 185 bits (471), Expect = 9e-48, Method: Composition-based stats. Identities = 51/194 (26%), Positives = 93/194 (47%), Gaps = 23/194 (11%) Query: 9 ASSGNGKSYDS------IMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTV 62 S G G+S + ++K +++GD VGK+CLL+ + D F ++ T+ + + +V Sbjct: 1 GSPGAGRSSMAHGPGALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAV-SV 59 Query: 63 DINGKKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIK-QWFKTVNEH 121 + GK+ L L+DTAGQE + + Y ++ + V + +F N+K +W + E+ Sbjct: 60 TVGGKQYLLGLYDTAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEY 119 Query: 122 ANDEAQLLLVGNKSDME-------------TRVVTADQGEALAKELG-IPFIESSAKNDD 167 A LL+G + D+ + + +QG+ LAKE+G ++E SA Sbjct: 120 AP-NVPFLLIGTQIDLRDDPKTLARLNDMKEKPICVEQGQKLAKEIGACCYVECSALTQK 178 Query: 168 NVNEIFFTLAKLIQ 181 + +F I Sbjct: 179 GLKTVFDEAIIAIL 192 >5WDR-A nrPDB Length = 171 Score = 185 bits (471), Expect = 1e-47, Method: Composition-based stats. Identities = 50/152 (32%), Positives = 83/152 (54%), Gaps = 3/152 (1%) Query: 33 KSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQERFRTITTAYYRG 92 KS L ++ ++ F + TI ++ K V I+ + L + DTAGQE + + Y R Sbjct: 20 KSALTIQLIQQHFVTEYDPTIEDSYR-KHVSIDDEACLLDILDTAGQEDYSAMRDQYMRT 78 Query: 93 AMGIILVYDVTDERTFTNIKQWFKTV-NEHANDEAQLLLVGNKSDMET-RVVTADQGEAL 150 G + VY + +++ I + + + DE ++LVGNK D+E R V+ + G+A+ Sbjct: 79 GEGFLCVYSIDSQQSLDEIHSFREQILRVKDQDEVPMILVGNKCDLEEHREVSTEAGQAV 138 Query: 151 AKELGIPFIESSAKNDDNVNEIFFTLAKLIQE 182 AK IPF+E+SAK NV E F+ L + I++ Sbjct: 139 AKSYSIPFMETSAKKRINVEEAFYQLVREIRK 170 >3VHL-B nrPDB Length = 195 Score = 185 bits (470), Expect = 1e-47, Method: Composition-based stats. Identities = 49/191 (25%), Positives = 89/191 (46%), Gaps = 17/191 (8%) Query: 13 NGKSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQ 72 +G S +K +++GD VGK+CLL+ + +KF ++ T+ ++ + TV I G+ L Sbjct: 3 SGSSGMQTIKCVVVGDGAVGKNCLLISYTTNKFPSEYVPTVFDNYAV-TVMIGGEPYTLG 61 Query: 73 LWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQ-WFKTVNEHANDEAQLLLV 131 L+DTAGQE + + Y ++ + V +F N+K+ W + H + LLV Sbjct: 62 LFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCP-KTPFLLV 120 Query: 132 GNKSDME-------------TRVVTADQGEALAKEL-GIPFIESSAKNDDNVNEIFFTLA 177 G + D+ + +T + E LA++L + ++E SA + +F Sbjct: 121 GTQIDLRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAI 180 Query: 178 KLIQEKIDSNK 188 E + K Sbjct: 181 LAALEPPEPKK 191 >1RYH-A nrPDB Length = 203 Score = 184 bits (468), Expect = 2e-47, Method: Composition-based stats. Identities = 49/198 (24%), Positives = 87/198 (43%), Gaps = 36/198 (18%) Query: 18 DSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTA 77 +K +++GD VGK+CLL+ + + F +I T+ ++ V ++GK V L LWDTA Sbjct: 3 MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYS-ANVMVDGKPVNLGLWDTA 61 Query: 78 GQERFRTITTAYYRG-------------------AMGIILVYDVTDERTFTNIK-QWFKT 117 GQE + + Y A ++ + + +F N++ +W+ Sbjct: 62 GQEDYDRLRPLSYPQTVGETYGKDITSRGKDKPIADVFLICFSLVSPASFENVRAKWYPE 121 Query: 118 VNEHANDEAQLLLVGNKSDMETR-------------VVTADQGEALAKELG-IPFIESSA 163 V H ++LVG K D+ +T QG A+AKE+G + ++E SA Sbjct: 122 VRHHCP-NTPIILVGTKLDLRDDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSA 180 Query: 164 KNDDNVNEIFFTLAKLIQ 181 + +F + + Sbjct: 181 LTQRGLKTVFDEAIRAVL 198 >4CZ2-A nrPDB Length = 230 Score = 184 bits (467), Expect = 3e-47, Method: Composition-based stats. Identities = 62/210 (29%), Positives = 113/210 (53%), Gaps = 13/210 (6%) Query: 15 KSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKK-VKLQL 73 ++ + + K+L+IG+ GVGK+ ++ R+V F+ + TIG+DF +K ++ + + V+LQL Sbjct: 25 ETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQL 84 Query: 74 WDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHAN----DEAQLL 129 WD AG ERF +T YY+ AMG +V+D++ TF + +W ++ + + Sbjct: 85 WDIAGLERFGNMTRVYYKEAMGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAV 144 Query: 130 LVGNKSDM-ETRVVTADQGEALAKELGIP-FIESSAKNDDNVNEIFFTLAKLIQEKIDSN 187 L+ NK D + ++ Q + KE G + E+SAK++ N+ E A+ + EK+ N Sbjct: 145 LLANKCDQNKDSSMSPSQMDQFCKEHGFAGWFETSAKDNINIEEA----ARFLVEKMLVN 200 Query: 188 KLVGVGNGKEGN-ISINSGSGN-SSKSNCC 215 + + I ++ + +KS CC Sbjct: 201 HQSFPNEENDVDKIKLDQETLRAENKSQCC 230 >2ERX-A nrPDB Length = 172 Score = 183 bits (465), Expect = 5e-47, Method: Composition-based stats. Identities = 51/166 (30%), Positives = 86/166 (51%), Gaps = 4/166 (2%) Query: 21 MKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQE 80 ++ + G GVGKS L++RFV+ F S+I T+ ++ + + + LQ+ DT G Sbjct: 4 YRVAVFGAGGVGKSSLVLRFVKGTFRESYIPTVEDTYR-QVISCDKSICTLQITDTTGSH 62 Query: 81 RFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHAND--EAQLLLVGNKSDM- 137 +F + ILVY +T ++ +K ++ + E D ++LVGNK D Sbjct: 63 QFPAMQRLSISKGHAFILVYSITSRQSLEELKPIYEQICEIKGDVESIPIMLVGNKCDES 122 Query: 138 ETRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEK 183 +R V + + EALA+ F+E+SAK + NV E+F L L + + Sbjct: 123 PSREVQSSEAEALARTWKCAFMETSAKLNHNVKELFQELLNLEKRR 168 >3A58-B nrPDB Length = 188 Score = 182 bits (462), Expect = 1e-46, Method: Composition-based stats. Identities = 44/173 (25%), Positives = 90/173 (52%), Gaps = 17/173 (9%) Query: 22 KILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQER 81 K++++GD GK+CLL+ + +F ++ T+ ++ + V+++G++V+L LWDTAGQE Sbjct: 12 KLVIVGDGACGKTCLLIVNSKGQFPEVYVPTVFENY-VADVEVDGRRVELALWDTAGQED 70 Query: 82 FRTITTAYYRGAMGIILVYDVTDERTFTNIKQ-WFKTVNEHANDEAQLLLVGNKSDMET- 139 + + Y + +++ + + + N+++ W V H ++LVG K D+ Sbjct: 71 YDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVL-HFCQGVPIILVGCKVDLRND 129 Query: 140 ------------RVVTADQGEALAKELGIP-FIESSAKNDDNVNEIFFTLAKL 179 + VT+ +G+++A ++G + E SAK V E+F + Sbjct: 130 PQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRA 182 >5ZVP-A nrPDB Length = 181 Score = 181 bits (461), Expect = 1e-46, Method: Composition-based stats. Identities = 47/173 (27%), Positives = 90/173 (52%), Gaps = 17/173 (9%) Query: 22 KILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQER 81 K++++GD GK+CLL+ + F ++ T+ ++ + V+++GK V+L LWDTAGQE Sbjct: 7 KLVIVGDGACGKTCLLIVNSKGTFPEVYVPTVFENY-VADVEVDGKHVELALWDTAGQED 65 Query: 82 FRTITTAYYRGAMGIILVYDVTDERTFTNIKQ-WFKTVNEHANDEAQLLLVGNKSDME-- 138 + + Y + I++ + + + N+++ W V H ++LVG K D+ Sbjct: 66 YDRLRPLSYPDSHVILICFAIDSPDSLDNVQEKWISEVL-HFCQGLPIILVGCKKDLRHD 124 Query: 139 -----------TRVVTADQGEALAKELG-IPFIESSAKNDDNVNEIFFTLAKL 179 + VT +QGE + K++G ++E SA+ ++ V E+F + Sbjct: 125 PKTIEELHKTSQKPVTPEQGEEVRKKIGAYKYLECSARTNEGVREVFEAATRA 177 >3CBQ-A nrPDB Length = 195 Score = 180 bits (457), Expect = 4e-46, Method: Composition-based stats. Identities = 46/176 (26%), Positives = 86/176 (48%), Gaps = 3/176 (1%) Query: 16 SYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWD 75 D I K++L+G+SGVGKS L F + + + D + + ++ ++V L ++D Sbjct: 19 QKDGIFKVMLVGESGVGKSTLAGTFGGLQGDSAHEPENPEDTYERRIMVDKEEVTLVVYD 78 Query: 76 TAGQ-ERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNE-HANDEAQLLLVGN 133 Q + + + ++V+ VTD R+F+ + + + + + ++LVGN Sbjct: 79 IWEQGDAGGWLRDHCLQTGDAFLIVFSVTDRRSFSKVPETLLRLRAGRPHHDLPVILVGN 138 Query: 134 KSDM-ETRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEKIDSNK 188 KSD+ +R V+ ++G LA L IE+SA N E+F + I+ + N Sbjct: 139 KSDLARSREVSLEEGRHLAGTLSCKHIETSAALHHNTRELFEGAVRQIRLRRGRNH 194 >3PIR-A nrPDB Length = 183 Score = 179 bits (455), Expect = 7e-46, Method: Composition-based stats. Identities = 61/186 (32%), Positives = 106/186 (56%), Gaps = 8/186 (4%) Query: 1 MSGLRTVSASSGNGKSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIK 60 + + T + S N +Y K++++GD GVGKS L ++F + F P + TI + K Sbjct: 3 LGSMATSAVPSENLPTY----KLVVVGDGGVGKSALTIQFFQKIFVPEYDPTIEDSYL-K 57 Query: 61 TVDINGKKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTV-N 119 +I+ + L + DTAGQE F + Y R G ++VY VTD+ +F ++ ++ + + Sbjct: 58 HTEIDNQWAILDVLDTAGQEEFSAMREQYMRTGDGFLIVYSVTDKASFEHVDRFHQLILR 117 Query: 120 EHANDEAQLLLVGNKSDM-ETRVVTADQGEALAKELGIPFIESSAKN-DDNVNEIFFTLA 177 + ++LV NK D+ R VT DQG+ +A + IP+IE+SAK+ NV++ F L Sbjct: 118 VKDRESFPMILVANKVDLMHLRKVTRDQGKEMATKYNIPYIETSAKDPPLNVDKTFHDLV 177 Query: 178 KLIQEK 183 ++I+++ Sbjct: 178 RVIRQQ 183 >5VCU-A nrPDB Length = 208 Score = 179 bits (455), Expect = 7e-46, Method: Composition-based stats. Identities = 40/191 (20%), Positives = 83/191 (43%), Gaps = 15/191 (7%) Query: 21 MKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQE 80 +K +++GD VGK+ LL+ + F ++ T+ ++ K + V + L+DTAGQE Sbjct: 12 IKCVVVGDGAVGKTALLIAYSSGCFPEDYVPTVFDNYN-KNIPYGDGIVSIALYDTAGQE 70 Query: 81 RFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSDMETR 140 + + Y ++ + + + + N + +H N + ++LVG K D++ Sbjct: 71 DYDRLRPLSYPDTDVFLVCFSLENPNSLENCHSKWAEELKHYNPDTPIVLVGTKLDLKKD 130 Query: 141 V-------------VTADQGEALAKEL-GIPFIESSAKNDDNVNEIFFTLAKLIQEKIDS 186 VT +QG+ + ++ +IE SAK +N+ E F + ++ Sbjct: 131 EEYVKKLKEKKISPVTTEQGQEMKDKIKACGYIECSAKTMENLTEAFNMAIDIAMKQRLK 190 Query: 187 NKLVGVGNGKE 197 + + Sbjct: 191 DAPPTANARNQ 201 >2ERY-A nrPDB Length = 172 Score = 179 bits (454), Expect = 9e-46, Method: Composition-based stats. Identities = 50/152 (32%), Positives = 90/152 (59%), Gaps = 3/152 (1%) Query: 33 KSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQERFRTITTAYYRG 92 KS L ++F++ F + TI + + V I+ + +L + DTAGQE F + Y R Sbjct: 18 KSALTIQFIQSYFVTDYDPTIEDSYTKQCV-IDDRAARLDILDTAGQEEFGAMREQYMRT 76 Query: 93 AMGIILVYDVTDERTFTNIKQWFKTV-NEHANDEAQLLLVGNKSDME-TRVVTADQGEAL 150 G +LV+ VTD +F I ++ + + DE ++L+GNK+D++ R VT ++G+ L Sbjct: 77 GEGFLLVFSVTDRGSFEEIYKFQRQILRVKDRDEFPMILIGNKADLDHQRQVTQEEGQQL 136 Query: 151 AKELGIPFIESSAKNDDNVNEIFFTLAKLIQE 182 A++L + ++E+SAK NV++ F L ++I++ Sbjct: 137 ARQLKVTYMEASAKIRMNVDQAFHELVRVIRK 168 >2G3Y-A nrPDB Length = 211 Score = 179 bits (454), Expect = 1e-45, Method: Composition-based stats. Identities = 53/197 (26%), Positives = 95/197 (48%), Gaps = 15/197 (7%) Query: 1 MSGLRTVSASSGNGKSYDSIMKILLIGDSGVGKSCLLVRF--VEDKFNPSFITTIGIDFK 58 MS +S+ SGN + +++LIG+ GVGKS L F V D + +G D Sbjct: 23 MSTDSVISSESGN-----TYYRVVLIGEQGVGKSTLANIFAGVHDSMDSD-CEVLGEDTY 76 Query: 59 IKTVDINGKK---VKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQW- 114 +T+ ++G+ + L +W+ G+ + + + ++VY +TD +F + Sbjct: 77 ERTLMVDGESATIILLDMWENKGENEW--LHDHCMQVGDAYLIVYSITDRASFEKASELR 134 Query: 115 FKTVNEHANDEAQLLLVGNKSDM-ETRVVTADQGEALAKELGIPFIESSAKNDDNVNEIF 173 + ++ ++LVGNKSD+ R V+ +G A A FIE+SA NV E+F Sbjct: 135 IQLRRARQTEDIPIILVGNKSDLVRCREVSVSEGRACAVVFDCKFIETSAAVQHNVKELF 194 Query: 174 FTLAKLIQEKIDSNKLV 190 + + ++ + DS + Sbjct: 195 EGIVRQVRLRRDSKEKN 211 >2Q3H-A nrPDB Length = 201 Score = 177 bits (449), Expect = 3e-45, Method: Composition-based stats. Identities = 48/172 (27%), Positives = 83/172 (48%), Gaps = 17/172 (9%) Query: 21 MKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQE 80 +K +L+GD VGK+ L+V + + + +I T +F V ++G+ V+LQL DTAGQ+ Sbjct: 21 VKCVLVGDGAVGKTSLVVSYTTNGYPTEYIPTAFDNFS-AVVSVDGRPVRLQLCDTAGQD 79 Query: 81 RFRTITTAYYRGAMGIILVYDVTDERTFTNIKQ-WFKTVNEHANDEAQLLLVGNKSDME- 138 F + Y +L + V +F N+ + W + H +A ++LVG +SD+ Sbjct: 80 EFDKLRPLCYTNTDIFLLCFSVVSPSSFQNVSEKWVPEIRCHCP-KAPIILVGTQSDLRE 138 Query: 139 ------------TRVVTADQGEALAKELGIP-FIESSAKNDDNVNEIFFTLA 177 + V + + LA+E+ +IE SA N+ E+F Sbjct: 139 DVKVLIELDKCKEKPVPEEAAKLLAEEIKAASYIECSALTQKNLKEVFDAAI 190 >2ATV-A nrPDB Length = 196 Score = 176 bits (447), Expect = 6e-45, Method: Composition-based stats. Identities = 55/177 (31%), Positives = 96/177 (54%), Gaps = 5/177 (2%) Query: 14 GKSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQL 73 + + +K+ + G +GVGKS L+VRF+ +F + T+ ++ + I+ + V +++ Sbjct: 22 SMAKSAEVKLAIFGRAGVGKSALVVRFLTKRFIWEYDPTLESTYRHQA-TIDDEVVSMEI 80 Query: 74 WDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNE-HANDEAQLLLVG 132 DTAGQE + R G +LVYD+TD +F + ++E L+LVG Sbjct: 81 LDTAGQED-TIQREGHMRWGEGFVLVYDITDRGSFEEVLPLKNILDEIKKPKNVTLILVG 139 Query: 133 NKSDME-TRVVTADQGEALAKELGIPFIESSAKNDD-NVNEIFFTLAKLIQEKIDSN 187 NK+D++ +R V+ ++GE LA EL F E SA + N+ EIF+ L + ++ + Sbjct: 140 NKADLDHSRQVSTEEGEKLATELACAFYECSACTGEGNITEIFYELCREVRRRRMVQ 196 >6FF8-A nrPDB Length = 181 Score = 175 bits (445), Expect = 1e-44, Method: Composition-based stats. Identities = 54/176 (30%), Positives = 98/176 (55%), Gaps = 7/176 (3%) Query: 13 NGKSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKK-VKL 71 + ++ + + K+L+IG+ GVGK+ ++ R+V F+ + TIG+DF +K ++ + + V+L Sbjct: 1 SMETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRL 60 Query: 72 QLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHAN----DEAQ 127 QLWD AG ERF +T YY+ A+G +V+D++ TF + +W ++ + Sbjct: 61 QLWDIAGLERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIP 120 Query: 128 LLLVGNKSDM-ETRVVTADQGEALAKELGIP-FIESSAKNDDNVNEIFFTLAKLIQ 181 +L+ NK D + + Q + KE G + E+SAK++ N+ E L + I Sbjct: 121 AVLLANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKIL 176 >4DJT-A nrPDB Length = 218 Score = 175 bits (444), Expect = 2e-44, Method: Composition-based stats. Identities = 55/177 (31%), Positives = 90/177 (50%), Gaps = 2/177 (1%) Query: 11 SGNGKSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIG-IDFKIKTVDINGKKV 69 G+ + + KI LIGD GVGK+ + R ++ +F ++ T+G ++ + +D G + Sbjct: 2 PGSMERRELTYKICLIGDGGVGKTTYINRVLDGRFEKNYNATVGAVNHPVTFLDDQGNVI 61 Query: 70 KLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLL 129 K +WDTAGQE+ + YY GA G IL +DVT T N+ +W K +EA ++ Sbjct: 62 KFNVWDTAGQEKKAVLKDVYYIGASGAILFFDVTSRITCQNLARWVKEFQAVVGNEAPIV 121 Query: 130 LVGNKSDMETRV-VTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEKID 185 + NK D++ R ++ + K + E SAK N F LA++ + D Sbjct: 122 VCANKIDIKNRQKISKKLVMEVLKGKNYEYFEISAKTAHNFGLPFLHLARIFTGRPD 178 >2FN4-A nrPDB Length = 181 Score = 175 bits (443), Expect = 2e-44, Method: Composition-based stats. Identities = 45/152 (29%), Positives = 78/152 (51%), Gaps = 3/152 (1%) Query: 33 KSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQERFRTITTAYYRG 92 KS L ++F++ F + TI + K ++G +L + DTAGQE F + Y R Sbjct: 22 KSALTIQFIQSYFVSDYDPTIEDSY-TKICSVDGIPARLDILDTAGQEEFGAMREQYMRA 80 Query: 93 AMGIILVYDVTDERTFTNIKQWFKTV-NEHANDEAQLLLVGNKSDME-TRVVTADQGEAL 150 G +LV+ + D ++F + + F + D+ ++LVGNK+D+E R V + A Sbjct: 81 GHGFLLVFAINDRQSFNEVGKLFTQILRVKDRDDFPVVLVGNKADLESQRQVPRSEASAF 140 Query: 151 AKELGIPFIESSAKNDDNVNEIFFTLAKLIQE 182 + + E+SAK NV+E F L + +++ Sbjct: 141 GASHHVAYFEASAKLRLNVDEAFEQLVRAVRK 172 >3Q85-A nrPDB Length = 169 Score = 174 bits (441), Expect = 3e-44, Method: Composition-based stats. Identities = 43/168 (25%), Positives = 84/168 (50%), Gaps = 3/168 (1%) Query: 20 IMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQ 79 + K++L+G+SGVGKS L F + + + D + + ++ ++V L ++D Q Sbjct: 2 VFKVMLVGESGVGKSTLAGTFGGLQGDHAHEMENSEDTYERRIMVDKEEVTLIVYDIWEQ 61 Query: 80 -ERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNE-HANDEAQLLLVGNKSDM 137 + + + ++V+ VTD R+F+ + + + + + ++LVGNKSD+ Sbjct: 62 GDAGGWLQDHCLQTGDAFLIVFSVTDRRSFSKVPETLLRLRAGRPHHDLPVILVGNKSDL 121 Query: 138 -ETRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEKI 184 +R V+ ++G LA L IE+SA N E+F + I+ + Sbjct: 122 ARSREVSLEEGRHLAGTLSCKHIETSAALHHNTRELFEGAVRQIRLRR 169 >2CJW-A nrPDB Length = 192 Score = 174 bits (441), Expect = 3e-44, Method: Composition-based stats. Identities = 47/183 (25%), Positives = 87/183 (47%), Gaps = 10/183 (5%) Query: 18 DSIMKILLIGDSGVGKSCLLVRF--VEDKFNPSFITTIGIDFKIKTVDINGKK---VKLQ 72 + +++LIG+ GVGKS L F V D + +G D +T+ ++G+ + L Sbjct: 4 MTYYRVVLIGEQGVGKSTLANIFAGVHDSMDSD-CEVLGEDTYERTLMVDGESATIILLD 62 Query: 73 LWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQW-FKTVNEHANDEAQLLLV 131 +W+ G+ + + + ++VY +TD +F + + ++ ++LV Sbjct: 63 MWENKGENEW--LHDHCMQVGDAYLIVYSITDRASFEKASELRIQLRRARQTEDIPIILV 120 Query: 132 GNKSDM-ETRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEKIDSNKLV 190 GNKSD+ R V+ +G A A FIE+SA NV E+F + + ++ + DS + Sbjct: 121 GNKSDLVRCREVSVSEGRACAVVFDCKFIETSAAVQHNVKELFEGIVRQVRLRRDSKEKN 180 Query: 191 GVG 193 Sbjct: 181 ERR 183 >2GF0-A nrPDB Length = 199 Score = 173 bits (438), Expect = 6e-44, Method: Composition-based stats. Identities = 48/171 (28%), Positives = 85/171 (49%), Gaps = 3/171 (1%) Query: 33 KSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQERFRTITTAYYRG 92 KS L++RFV+ F ++I TI ++ + + + LQ+ DT G +F + Sbjct: 21 KSSLVLRFVKGTFRDTYIPTIEDTYR-QVISCDKSVCTLQITDTTGSHQFPAMQRLSISK 79 Query: 93 AMGIILVYDVTDERTFTNIKQWFKTVNEHAN--DEAQLLLVGNKSDMETRVVTADQGEAL 150 ILV+ VT +++ + +K + + ++ ++LVGNK D R V + +A+ Sbjct: 80 GHAFILVFSVTSKQSLEELGPIYKLIVQIKGSVEDIPVMLVGNKCDETQREVDTREAQAV 139 Query: 151 AKELGIPFIESSAKNDDNVNEIFFTLAKLIQEKIDSNKLVGVGNGKEGNIS 201 A+E F+E+SAK + NV E+F L L + S + G +GK+ Sbjct: 140 AQEWKCAFMETSAKMNYNVKELFQELLTLETRRNMSLNIDGKRSGKQKRTD 190 >3REG-A nrPDB Length = 194 Score = 172 bits (437), Expect = 9e-44, Method: Composition-based stats. Identities = 54/184 (29%), Positives = 96/184 (52%), Gaps = 8/184 (4%) Query: 1 MSGLRTVSASSGNGKSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIK 60 S + T + NGK +KI+++GD VGK+CLL+ F + + +++ T+ +F Sbjct: 7 FSDMNTGAGKIENGK---KALKIVVVGDGAVGKTCLLLAFSKGEIPTAYVPTVFENFS-H 62 Query: 61 TVDINGKKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNE 120 + ++ L LWDTAGQE + + Y + ++L + V + +F NI ++ + Sbjct: 63 VMKYKNEEFILHLWDTAGQEEYDRLRPLSYADSDVVLLCFAVNNRTSFDNISTKWEPEIK 122 Query: 121 HANDEAQLLLVGNKSDME---TRVVTADQGEALAKELGI-PFIESSAKNDDNVNEIFFTL 176 H D A+ +LVG K D+ + VT +G+ L ++LG +IE+S+ +NE+F Sbjct: 123 HYIDTAKTVLVGLKVDLRKDGSDDVTKQEGDDLCQKLGCVAYIEASSVAKIGLNEVFEKS 182 Query: 177 AKLI 180 I Sbjct: 183 VDCI 186 >3CLV-A nrPDB Length = 208 Score = 171 bits (433), Expect = 3e-43, Method: Composition-based stats. Identities = 60/208 (28%), Positives = 95/208 (45%), Gaps = 39/208 (18%) Query: 14 GKSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDI--------- 64 G S K +L+G+S VGKS +++R +D F+ + TTIG F V++ Sbjct: 1 GMEKKSSYKTVLLGESSVGKSSIVLRLTKDTFHENTNTTIGASFCTYVVNLNDINIKNNS 60 Query: 65 ----------------------------NGKKVKLQLWDTAGQERFRTITTAYYRGAMGI 96 N +K +WDTAGQER+ +I YYRGA Sbjct: 61 NNEKNNNINSINDDNNVIITNQHNNYNENLCNIKFDIWDTAGQERYASIVPLYYRGATCA 120 Query: 97 ILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSDMETRVVTADQGEALAKELGI 156 I+V+D+++ T K W + + ++LV NK D V + + A++ + Sbjct: 121 IVVFDISNSNTLDRAKTWVNQLKI--SSNYIIILVANKIDKNKFQVDILEVQKYAQDNNL 178 Query: 157 PFIESSAKNDDNVNEIFFTLAKLIQEKI 184 FI++SAK N+ IF+ LA+ I + I Sbjct: 179 LFIQTSAKTGTNIKNIFYMLAEEIYKNI 206 >5XC3-A nrPDB Length = 176 Score = 170 bits (432), Expect = 3e-43, Method: Composition-based stats. Identities = 57/165 (34%), Positives = 96/165 (58%), Gaps = 3/165 (1%) Query: 21 MKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDI-NGKKVKLQLWDTAGQ 79 KI+LIG SGVGKS ++ +F+ ++ + TIG F K V NGK +KL +WDTAGQ Sbjct: 6 YKIILIGSSGVGKSSIVHQFLFNRKISNVSPTIGAAFASKQVIAKNGKTLKLNIWDTAGQ 65 Query: 80 ERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSDMET 139 ERFR+IT YY ++G ++V+DVTD +F ++ W + + + +L+V NK D++ Sbjct: 66 ERFRSITKMYYTNSLGCLVVFDVTDRESFDDVYYWINDLRINCHTTYYILVVANKIDIDK 125 Query: 140 R--VVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQE 182 V+ ++ + ++ ++ +S+ D VN +F + + E Sbjct: 126 NNWRVSENEIKKFCRDNDCDYVFASSFESDTVNNLFGKMIDKMSE 170 >3OES-A nrPDB Length = 201 Score = 168 bits (427), Expect = 1e-42, Method: Composition-based stats. Identities = 57/181 (31%), Positives = 94/181 (51%), Gaps = 9/181 (4%) Query: 10 SSGNGKSYDSIM------KILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVD 63 SSG Y M K++++G VGK+ L +FVE +F+ + T+ + K V Sbjct: 8 SSGRENLYFQGMPLVRYRKVVILGYRCVGKTSLAHQFVEGEFSEGYDPTVE-NTYSKIVT 66 Query: 64 INGKKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNE-HA 122 + + L L DTAGQ+ + + ++ G G +LVY VT +F I+ ++ ++E H Sbjct: 67 LGKDEFHLHLVDTAGQDEYSILPYSFIIGVHGYVLVYSVTSLHSFQVIESLYQKLHEGHG 126 Query: 123 NDEAQLLLVGNKSDM-ETRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQ 181 ++LVGNK+D+ R V A +G+ LA+ G F+ESSA+ + IF + + I Sbjct: 127 KTRVPVVLVGNKADLSPEREVQAVEGKKLAESWGATFMESSARENQLTQGIFTKVIQEIA 186 Query: 182 E 182 Sbjct: 187 R 187 >3T5G-A nrPDB Length = 181 Score = 168 bits (427), Expect = 1e-42, Method: Composition-based stats. Identities = 62/166 (37%), Positives = 94/166 (56%), Gaps = 4/166 (2%) Query: 22 KILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQER 81 KI ++G VGKS L ++FVE +F S+ TI F K + +NG++ LQL DTAGQ+ Sbjct: 8 KIAILGYRSVGKSSLTIQFVEGQFVDSYDPTIENTF-TKLITVNGQEYHLQLVDTAGQDE 66 Query: 82 FRTITTAYYRGAMGIILVYDVTDERTFTNIKQWF-KTVNEHANDEAQLLLVGNKSDME-T 139 + Y G ILVY VT ++F IK K ++ + ++LVGNK D+ Sbjct: 67 YSIFPQTYSIDINGYILVYSVTSIKSFEVIKVIHGKLLDMVGKVQIPIMLVGNKKDLHME 126 Query: 140 RVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEKID 185 RV++ ++G+ALA+ F+ESSAK + ++F + L EK+D Sbjct: 127 RVISYEEGKALAESWNAAFLESSAKENQTAVDVFRRII-LEAEKMD 171 >4MIT-A nrPDB Length = 186 Score = 166 bits (422), Expect = 4e-42, Method: Composition-based stats. Identities = 46/176 (26%), Positives = 86/176 (48%), Gaps = 17/176 (9%) Query: 21 MKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQE 80 +K++++GD VGK+CLL+ + KF +I T+ ++ + ++ ++++L LWDTAG E Sbjct: 11 IKLVVVGDGAVGKTCLLISYSIRKFPEDYIPTVFDNYVV-SLTAGTRQIQLALWDTAGLE 69 Query: 81 RFRTITTAYYRGAMGIILVYDVTDERTFTNI-KQWFKTVNEHANDEAQLLLVGNKSDMET 139 + + Y A ++ + VT ++ N+ +W V A + ++LVG K D Sbjct: 70 EYDQLRPLSYSSASIFLICFSVTSSVSYDNVITKWHPEVIHFAP-KVPIILVGTKLDTRN 128 Query: 140 R-------------VVTADQGEALAKEL-GIPFIESSAKNDDNVNEIFFTLAKLIQ 181 V+ +GE L + + +IE SAK +N+ +F K + Sbjct: 129 DPAIVKRLTEQGMTVINTAKGEELKNRIKAVKYIECSAKTSENLKTVFDEAVKTVL 184 >3E5H-A nrPDB Length = 178 Score = 166 bits (421), Expect = 7e-42, Method: Composition-based stats. Identities = 56/171 (32%), Positives = 92/171 (53%), Gaps = 5/171 (2%) Query: 16 SYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGK-KVKLQLW 74 S+ +KI+++GD GK+ L F ++ F + TIG+DF ++ + + G V LQ+W Sbjct: 2 SHMRQLKIVVLGDGASGKTSLTTCFAQETFGKQYKQTIGLDFFLRRITLPGNLNVTLQIW 61 Query: 75 DTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWF---KTVNEHANDEAQLLLV 131 D GQ + Y GA G++LVYD+T+ ++F N++ W+ K V+E + + + LV Sbjct: 62 DIGGQTIGGKMLDKYIYGAQGVLLVYDITNYQSFENLEDWYTVVKKVSEESETQPLVALV 121 Query: 132 GNKSDME-TRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQ 181 GNK D+E R + ++ +E G SAK D+V F +A I Sbjct: 122 GNKIDLEHMRTIKPEKHLRFCQENGFSSHFVSAKTGDSVFLCFQKVAAEIL 172 >3Q72-A nrPDB Length = 166 Score = 164 bits (415), Expect = 3e-41, Method: Composition-based stats. Identities = 48/168 (28%), Positives = 83/168 (49%), Gaps = 4/168 (2%) Query: 19 SIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAG 78 S+ K+LL+G GVGKS L F + P G + +++ ++G++ L ++D Sbjct: 1 SVYKVLLLGAPGVGKSALARIFGGVEDGPEAEA-AGHTY-DRSIVVDGEEASLMVYDIWE 58 Query: 79 QERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQW-FKTVNEHANDEAQLLLVGNKSDM 137 Q+ R + ++VY VTD+ +F + + D+ ++LVGNKSD+ Sbjct: 59 QDGGRWLPGHCMAMGDAYVIVYSVTDKGSFEKASELRVQLRRARQTDDVPIILVGNKSDL 118 Query: 138 -ETRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEKI 184 +R V+ D+G A A FIE+SA NV +F + + I+ + Sbjct: 119 VRSREVSVDEGRACAVVFDCKFIETSAALHHNVQALFEGVVRQIRLRR 166 >2NZJ-A nrPDB Length = 175 Score = 162 bits (411), Expect = 9e-41, Method: Composition-based stats. Identities = 44/162 (27%), Positives = 78/162 (48%), Gaps = 5/162 (3%) Query: 18 DSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTA 77 ++ +++L+GD GVGK+ L F + +G D +T+ ++G+ L + DT Sbjct: 2 MALYRVVLLGDPGVGKTSLASLFAGKQERDLHEQ-LGEDVYERTLTVDGEDTTLVVVDTW 60 Query: 78 GQERFRTITTA--YYRGAMGIILVYDVTDERTFTNIKQWFKTVNE-HANDEAQLLLVGNK 134 E+ + +G ++VY + D +F + + + H D ++LVGNK Sbjct: 61 EAEKLDKSWSQESCLQGGSAYVIVYSIADRGSFESASELRIQLRRTHQADHVPIILVGNK 120 Query: 135 SDM-ETRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFT 175 +D+ R V+ ++G A A FIE+SA NV E+F Sbjct: 121 ADLARCREVSVEEGRACAVVFDCKFIETSATLQHNVAELFEG 162 >3RAP-R nrPDB Length = 167 Score = 162 bits (410), Expect = 1e-40, Method: Composition-based stats. Identities = 51/150 (34%), Positives = 87/150 (58%), Gaps = 3/150 (2%) Query: 33 KSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQERFRTITTAYYRG 92 KS L V+FV F + TI DF K ++++ L++ DTAG E+F ++ Y + Sbjct: 16 KSALTVQFVTGTFIEKYDPTIE-DFYRKEIEVDSSPSVLEILDTAGTEQFASMRDLYIKN 74 Query: 93 AMGIILVYDVTDERTFTNIKQWFKT-VNEHANDEAQLLLVGNKSDM-ETRVVTADQGEAL 150 G ILVY + ++++F +IK + ++ ++LVGNK D+ R V++ +G AL Sbjct: 75 GQGFILVYSLVNQQSFQDIKPMRDQIIRVKRYEKVPVILVGNKVDLESEREVSSSEGRAL 134 Query: 151 AKELGIPFIESSAKNDDNVNEIFFTLAKLI 180 A+E G PF+E+SAK+ V+E+F + + + Sbjct: 135 AEEWGCPFMETSAKSKTMVDELFAEIVRQM 164 >1GWN-A nrPDB Length = 205 Score = 160 bits (405), Expect = 4e-40, Method: Composition-based stats. Identities = 49/183 (26%), Positives = 94/183 (51%), Gaps = 20/183 (10%) Query: 10 SSGNGKSYDSIMK--ILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGK 67 G+ + +K I+++GDS GK+ LL F +D F +++ T+ ++ + +I+ + Sbjct: 16 PRGSHMDPNQNVKCKIVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENY-TASFEIDTQ 74 Query: 68 KVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNI-KQWFKTVNEHANDEA 126 +++L LWDT+G + + Y + +++ +D++ T ++ K+W + E Sbjct: 75 RIELSLWDTSGSPYYDNVRPLSYPDSDAVLICFDISRPETLDSVLKKWKGEIQEFCP-NT 133 Query: 127 QLLLVGNKSDM-------------ETRVVTADQGEALAKELGIP-FIESSAKNDDN-VNE 171 ++LLVG KSD+ V+ DQG +AK++G +IE SA +N V + Sbjct: 134 KMLLVGCKSDLRTDVSTLVELSNHRQTPVSYDQGANMAKQIGAATYIECSALQSENSVRD 193 Query: 172 IFF 174 IF Sbjct: 194 IFH 196 >1M7B-A nrPDB Length = 184 Score = 158 bits (400), Expect = 2e-39, Method: Composition-based stats. Identities = 48/169 (28%), Positives = 90/169 (53%), Gaps = 18/169 (10%) Query: 22 KILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQER 81 KI+++GDS GK+ LL F +D F +++ T+ ++ + +I+ ++++L LWDT+G Sbjct: 9 KIVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENY-TASFEIDTQRIELSLWDTSGSPY 67 Query: 82 FRTITTAYYRGAMGIILVYDVTDERTFTNI-KQWFKTVNEHANDEAQLLLVGNKSDM--- 137 + + Y + +++ +D++ T ++ K+W + E ++LLVG KSD+ Sbjct: 68 YDNVRPLSYPDSDAVLICFDISRPETLDSVLKKWKGEIQEFCP-NTKMLLVGCKSDLRTD 126 Query: 138 ----------ETRVVTADQGEALAKELGIP-FIESSAKNDDN-VNEIFF 174 V+ DQG +AK++G +IE SA +N V +IF Sbjct: 127 VSTLVELSNHRQTPVSYDQGANMAKQIGAATYIECSALQSENSVRDIFH 175 >3LVQ-E nrPDB Length = 497 Score = 154 bits (389), Expect = 4e-38, Method: Composition-based stats. Identities = 46/186 (24%), Positives = 80/186 (43%), Gaps = 12/186 (6%) Query: 5 RTVSASSGNGKSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDI 64 T S S G + M+IL++G GK+ +L + K S T + F ++TV Sbjct: 307 STASNSPGIEGLSNKEMRILMLGLDAAGKTTILYKL---KLGQSVTTIPTVGFNVETVTY 363 Query: 65 NGKKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIK-QWFKTVNEHAN 123 K VK +WD GQ++ R + YY G G+I V D D + + + +N+ Sbjct: 364 --KNVKFNVWDVGGQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREM 421 Query: 124 DEAQLLLVGNKSDMETRVVTADQGEAL----AKELGIPFIESSAKN-DDNVNEIFFTLAK 178 +A +L+ NK D+ + + E L ++ +++ S D + E L Sbjct: 422 RDAIILIFANKQDLPDAMKPHEIQEKLGLTRIRDRNW-YVQPSCATSGDGLYEGLTWLTS 480 Query: 179 LIQEKI 184 + K+ Sbjct: 481 NYKSKL 486 >6FAE-B nrPDB Length = 213 Score = 147 bits (372), Expect = 3e-36, Method: Composition-based stats. Identities = 40/177 (22%), Positives = 75/177 (42%), Gaps = 10/177 (5%) Query: 12 GNGKSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKL 71 G Y M+IL++G GK+ +L + K T I F ++TV+ K + Sbjct: 41 GTENLYFQSMRILMVGLDAAGKTTILYKL---KLGEIVTTIPTIGFNVETVEY--KNISF 95 Query: 72 QLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTF-TNIKQWFKTVNEHANDEAQLLL 130 +WD GQ++ R + Y++ G+I V D D ++ + + E +A LL+ Sbjct: 96 TVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLV 155 Query: 131 VGNKSDMETRVVTADQGEAL----AKELGIPFIESSAKNDDNVNEIFFTLAKLIQEK 183 NK D+ + A+ + L + + A + D + E L+ ++ + Sbjct: 156 FANKQDLPNAMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLSNQLRNQ 212 >5EE5-B nrPDB Length = 171 Score = 144 bits (364), Expect = 2e-35, Method: Composition-based stats. Identities = 44/175 (25%), Positives = 76/175 (43%), Gaps = 10/175 (5%) Query: 14 GKSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQL 73 G M+IL++G G GK+ +L R + + I TIG F ++TV K +K Q+ Sbjct: 1 GSHMTREMRILILGLDGAGKTTILYRLQVGEVVTT-IPTIG--FNVETVTY--KNLKFQV 55 Query: 74 WDTAGQERFRTITTAYYRGAMGIILVYDVTDERTF-TNIKQWFKTVNEHANDEAQLLLVG 132 WD G R YY +I V D D + + + E +A L++ Sbjct: 56 WDLGGLTSIRPYWRCYYSNTDAVIYVVDSCDRDRIGISKSELVAMLEEEELRKAILVVFA 115 Query: 133 NKSDMETRVVTADQGEAL----AKELGIPFIESSAKNDDNVNEIFFTLAKLIQEK 183 NK DME + +++ +L K+ ++SA ++E L + ++ + Sbjct: 116 NKQDMEQAMTSSEMANSLGLPALKDRKWQIFKTSATKGTGLDEAMEWLVETLKSR 170 >2REX-B nrPDB Length = 197 Score = 144 bits (363), Expect = 3e-35, Method: Composition-based stats. Identities = 42/181 (23%), Positives = 91/181 (50%), Gaps = 18/181 (9%) Query: 22 KILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQER 81 K++L+GD GK+ +L +D + +++ T+ ++ ++ ++V+L LWDT+G Sbjct: 12 KLVLVGDVQCGKTAMLQVLAKDCYPETYVPTVFENY-TACLETEEQRVELSLWDTSGSPY 70 Query: 82 FRTITTAYYRGAMGIILVYDVTDERTFT-NIKQWFKTVNEHANDEAQLLLVGNKSDME-- 138 + + Y + ++L +D++ T +K+W + ++ ++LL+G K+D+ Sbjct: 71 YDNVRPLCYSDSDAVLLCFDISRPETVDSALKKWRTEILDYCP-STRVLLIGCKTDLRTD 129 Query: 139 -----------TRVVTADQGEALAKELGIP-FIESSAKNDD-NVNEIFFTLAKLIQEKID 185 ++ +QG A+AK+LG ++E SA + +++ IF T + L K Sbjct: 130 LSTLMELSHQKQAPISYEQGCAIAKQLGAEIYLEGSAFTSEKSIHSIFRTASMLCLNKPS 189 Query: 186 S 186 Sbjct: 190 P 190 >3O47-A nrPDB Length = 329 Score = 144 bits (363), Expect = 4e-35, Method: Composition-based stats. Identities = 38/170 (22%), Positives = 73/170 (42%), Gaps = 10/170 (5%) Query: 19 SIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAG 78 M+IL++G GK+ +L + K T I F ++TV+ K + +WD G Sbjct: 164 KEMRILMVGLDAAGKTTILYKL---KLGEIVTTIPTIGFNVETVEY--KNISFTVWDVGG 218 Query: 79 QERFRTITTAYYRGAMGIILVYDVTDERTF-TNIKQWFKTVNEHANDEAQLLLVGNKSDM 137 Q++ R + Y++ G+I V D D ++ + + E +A LL+ NK D+ Sbjct: 219 QDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDL 278 Query: 138 ETRVVTADQGEAL----AKELGIPFIESSAKNDDNVNEIFFTLAKLIQEK 183 + A+ + L + + A + D + E L+ ++ + Sbjct: 279 PNAMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLSNQLRNQ 328 >3LRP-A nrPDB Length = 181 Score = 143 bits (362), Expect = 4e-35, Method: Composition-based stats. Identities = 40/161 (24%), Positives = 71/161 (44%), Gaps = 10/161 (6%) Query: 21 MKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQE 80 ++IL++G GK+ +L + K T I F ++TV+ + + +WD GQ+ Sbjct: 18 VRILMVGLDAAGKTTILYKV---KLGEVVTTIPTIGFNVETVEF--RNISFTVWDVGGQD 72 Query: 81 RFRTITTAYYRGAMGIILVYDVTDERTFTNIK-QWFKTVNEHANDEAQLLLVGNKSDMET 139 + R + YY G+I V D D + + + + +NE +A +L+ NK D+ Sbjct: 73 KIRPLWRHYYSNTDGLIFVVDSNDRERIDDAREELHRMINEEELKDAIILVFANKQDLPN 132 Query: 140 RVVTADQGEALA----KELGIPFIESSAKNDDNVNEIFFTL 176 + A+ E L +E + A D + E F L Sbjct: 133 AMSAAEVTEKLHLNTIRERNWFIQSTCATRGDGLYEGFDWL 173 >4YLG-A nrPDB Length = 173 Score = 143 bits (361), Expect = 6e-35, Method: Composition-based stats. Identities = 42/170 (24%), Positives = 73/170 (42%), Gaps = 16/170 (9%) Query: 19 SIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAG 78 M+IL++G GK+ +L + K T I F ++TV+ K + +WD G Sbjct: 12 KEMRILMVGLDAAGKTSILYKL---KLGEIVTTIPTIGFNVETVEY--KNISFTVWDVGG 66 Query: 79 QERFRTITTAYYRGAMGIILVYDVTDERTF-TNIKQWFKTVNEHANDEAQLLLVGNKSDM 137 Q++ R + YY+ II V D D ++ K +NE A LL+ NK D+ Sbjct: 67 QDKIRPLWRHYYQNTQAIIFVVDSNDRDRIGEAREELMKMLNEDEMRNAILLVFANKHDL 126 Query: 138 ETRVVTADQGEALA------KELGIPFIESSAKND-DNVNEIFFTLAKLI 180 + ++ E L ++ + ++S + D + E LA + Sbjct: 127 PQAMSISEVTEKLGLQTIKNRKW---YCQTSCATNGDGLYEGLDWLADNL 173 >3AQ4-A nrPDB Length = 184 Score = 141 bits (356), Expect = 2e-34, Method: Composition-based stats. Identities = 40/170 (23%), Positives = 73/170 (42%), Gaps = 10/170 (5%) Query: 19 SIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAG 78 M+IL++G GK+ +L + K T I F ++TV+ K + +WD G Sbjct: 19 KEMRILMVGLDAAGKTTILYKL---KLGEIVTTIPTIGFNVETVEY--KNISFTVWDVGG 73 Query: 79 QERFRTITTAYYRGAMGIILVYDVTDERT-FTNIKQWFKTVNEHANDEAQLLLVGNKSDM 137 Q++ R + Y++ G+I V D D + + +NE +A LL+ NK D+ Sbjct: 74 QDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDL 133 Query: 138 ETRVVTADQGEAL----AKELGIPFIESSAKNDDNVNEIFFTLAKLIQEK 183 + A+ + L ++ + A + + + E L+ I K Sbjct: 134 PNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASK 183 >6DFF-C nrPDB Length = 193 Score = 141 bits (356), Expect = 2e-34, Method: Composition-based stats. Identities = 38/170 (22%), Positives = 73/170 (42%), Gaps = 10/170 (5%) Query: 19 SIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAG 78 S M+IL++G GK+ +L + K T I F ++TV+ K + +WD G Sbjct: 28 SEMRILMVGLDAAGKTTILYKL---KLGEIVTTIPTIGFNVETVEY--KNISFTVWDVGG 82 Query: 79 QERFRTITTAYYRGAMGIILVYDVTDERTF-TNIKQWFKTVNEHANDEAQLLLVGNKSDM 137 ++ R + Y++ G+I V D D ++ + + E +A LL+ NK D+ Sbjct: 83 LDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDL 142 Query: 138 ETRVVTADQGEAL----AKELGIPFIESSAKNDDNVNEIFFTLAKLIQEK 183 + A+ + L + + A + D + E L+ ++ + Sbjct: 143 PNAMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLSNQLRNQ 192 >2A5F-A nrPDB Length = 175 Score = 140 bits (354), Expect = 3e-34, Method: Composition-based stats. Identities = 41/165 (24%), Positives = 73/165 (44%), Gaps = 12/165 (7%) Query: 18 DSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTA 77 + M+IL++G GK+ +L + K S T + F ++TV K VK +WD Sbjct: 11 NKEMRILMLGLDAAGKTTILYKL---KLGQSVTTIPTVGFNVETVTY--KNVKFNVWDVG 65 Query: 78 GQERFRTITTAYYRGAMGIILVYDVTDERTFTNIK-QWFKTVNEHANDEAQLLLVGNKSD 136 GQ++ R + YY G G+I V D D + + + +N+ +A +L+ NK D Sbjct: 66 GQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRDAIILIFANKQD 125 Query: 137 METRVVTADQGEAL----AKELGIPFIESSAKN-DDNVNEIFFTL 176 + + + E L ++ +++ S D + E L Sbjct: 126 LPDAMKPHEIQEKLGLTRIRDRNW-YVQPSCATSGDGLYEGLTWL 169 >1J2J-A nrPDB Length = 166 Score = 140 bits (354), Expect = 4e-34, Method: Composition-based stats. Identities = 37/168 (22%), Positives = 72/168 (42%), Gaps = 10/168 (5%) Query: 21 MKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQE 80 M+IL++G GK+ +L + K T I F ++TV+ K + +WD G + Sbjct: 3 MRILMVGLDAAGKTTILYKL---KLGEIVTTIPTIGFNVETVEY--KNISFTVWDVGGLD 57 Query: 81 RFRTITTAYYRGAMGIILVYDVTDERTF-TNIKQWFKTVNEHANDEAQLLLVGNKSDMET 139 + R + Y++ G+I V D D ++ + + E +A LL+ NK D+ Sbjct: 58 KIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPN 117 Query: 140 RVVTADQGEAL----AKELGIPFIESSAKNDDNVNEIFFTLAKLIQEK 183 + A+ + L + + A + D + E L+ ++ + Sbjct: 118 AMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLSNQLRNQ 165 >6BBQ-A nrPDB Length = 520 Score = 139 bits (352), Expect = 7e-34, Method: Composition-based stats. Identities = 43/181 (23%), Positives = 77/181 (42%), Gaps = 15/181 (8%) Query: 5 RTVSASSGNGKSY---DSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKT 61 R ++ G S + M+IL++G GK+ +L + K S T + F ++T Sbjct: 341 RRIANKKGKVLSKIFGNKEMRILMLGLDAAGKTTILYKL---KLGQSVTTIPTVGFNVET 397 Query: 62 VDINGKKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIK-QWFKTVNE 120 V K VK +WD G ++ R + YY G G+I V D D + + + +N+ Sbjct: 398 VTY--KNVKFNVWDVGGLDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIIND 455 Query: 121 HANDEAQLLLVGNKSDMETRVVTADQGEAL----AKELGIPFIESSAKN-DDNVNEIFFT 175 +A +L+ NK D+ + + E L ++ +++ S D + E Sbjct: 456 REMRDAIILIFANKQDLPDAMKPHEIQEKLGLTRIRDRNW-YVQPSCATSGDGLYEGLTW 514 Query: 176 L 176 L Sbjct: 515 L 515 >5UF8-A nrPDB Length = 181 Score = 139 bits (350), Expect = 1e-33, Method: Composition-based stats. Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 10/170 (5%) Query: 18 DSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTA 77 + M+IL++G GK+ +L + K T I F ++TV+ K + +WD Sbjct: 15 NKEMRILMVGLDAAGKTTILYKL---KLGEIVTTIPTIGFNVETVEY--KNISFTVWDVG 69 Query: 78 GQERFRTITTAYYRGAMGIILVYDVTDERTF-TNIKQWFKTVNEHANDEAQLLLVGNKSD 136 GQ++ R + Y++ GII V D D ++ + +NE +A LL+ NK D Sbjct: 70 GQDKIRPLWRYYFQNTQGIIFVVDSNDRDRIAEAREELQQMLNEDELRDALLLVFANKQD 129 Query: 137 METRVVTADQGEAL----AKELGIPFIESSAKNDDNVNEIFFTLAKLIQE 182 + + A+ E L ++ + A D + E L+ ++ Sbjct: 130 LPNAMNAAEITEKLGLHSIRQRPWYIQATCATTGDGLYEGLEWLSTNLKN 179 >2B6H-A nrPDB Length = 192 Score = 139 bits (350), Expect = 1e-33, Method: Composition-based stats. Identities = 39/172 (22%), Positives = 74/172 (43%), Gaps = 18/172 (10%) Query: 21 MKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQE 80 M+IL++G GK+ +L + K T I F ++TV+ K + +WD GQ+ Sbjct: 30 MRILMVGLDAAGKTTILYKL---KLGEIVTTIPTIGFNVETVEY--KNICFTVWDVGGQD 84 Query: 81 RFRTITTAYYRGAMGIILVYDVTDERTF-TNIKQWFKTVNEHANDEAQLLLVGNKSDMET 139 + R + Y++ G+I V D D + + K + E +A LL+ NK DM Sbjct: 85 KIRPLWRHYFQNTQGLIFVVDSNDRERVQESADELQKMLQEDELRDAVLLVFANKQDMPN 144 Query: 140 RVVTADQGEALAKELGIPFIE--------SSAKNDDNVNEIFFTLAKLIQEK 183 + ++ L +LG+ + + A + + L+ + ++ Sbjct: 145 AMPVSE----LTDKLGLQHLRSRTWYVQATCATQGTGLYDGLDWLSHELSKR 192 >5NZV-F nrPDB Length = 181 Score = 139 bits (350), Expect = 1e-33, Method: Composition-based stats. Identities = 43/170 (25%), Positives = 74/170 (43%), Gaps = 10/170 (5%) Query: 18 DSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTA 77 + M+IL++G G GK+ +L + K T I F ++TV K + +WD Sbjct: 15 NKEMRILMVGLDGAGKTTVLYKL---KLGEVITTIPTIGFNVETVQY--KNISFTVWDVG 69 Query: 78 GQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFK-TVNEHANDEAQLLLVGNKSD 136 GQ+R R++ YYR G+I V D D ++ + +NE A L+ NK D Sbjct: 70 GQDRIRSLWRHYYRNTEGVIFVVDSNDRSRIGEAREVMQRMLNEDELRNAAWLVFANKQD 129 Query: 137 METRVVTADQGEA--LAKELGIPFI--ESSAKNDDNVNEIFFTLAKLIQE 182 + + A+ E L P+ + A + + + E L+ ++ Sbjct: 130 LPEAMSAAEITEKLGLHSIRNRPWFIQATCATSGEGLYEGLEWLSNSLKN 179 >5C1S-A nrPDB Length = 391 Score = 139 bits (350), Expect = 1e-33, Method: Composition-based stats. Identities = 51/182 (28%), Positives = 95/182 (52%), Gaps = 15/182 (8%) Query: 3 GLRTVSASSGNGKSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTV 62 LRT S G + +++L++G SGVGK+ L F E + G + + K V Sbjct: 50 SLRTRSQIIGKKE-----IRLLVVGSSGVGKTTLCDCFFESH------QSQGEETREKHV 98 Query: 63 DINGKKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQ-WFKTVNEH 121 I+ +++ + D AGQ+ F Y G I+++YD+T+ ++FT++K W + + Sbjct: 99 QIDNDFIRISISDIAGQQSFYACDNPY-DGYDAILVMYDITELKSFTDLKTMWLPDIFLY 157 Query: 122 ANDEAQLLLVGNKSDME-TRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLI 180 N + Q++++GNK D E R++T + E A++ F E S K+ D+ +F +++ Sbjct: 158 CNIDTQIIIIGNKKDQEIDRIITRKEAEQFAQDRLCQFYEISTKD-DSCQLLFDCISRDF 216 Query: 181 QE 182 + Sbjct: 217 LQ 218 Score = 93.7 bits (232), Expect = 5e-20, Method: Composition-based stats. Identities = 45/173 (26%), Positives = 82/173 (47%), Gaps = 21/173 (12%) Query: 18 DSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIK-TVDINGKKVKLQL--- 73 D +++L++GD VGK+ + +F T G DF T +K+K ++ Sbjct: 220 DIKIRMLMVGDQNVGKTTFIRKFA------LQDPT-GHDFMNAITTRFEMEKIKYEIIMI 272 Query: 74 -WDTAGQERFRTIT---TAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLL 129 W + + A R I++VYD+T+E +F NI + + + + + + Sbjct: 273 DWGF-----YNKLLQTNPAISRTIEAILIVYDITNEESFQNIHRKYYPLINNKFSDVAGV 327 Query: 130 LVGNKSDME-TRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQ 181 +VG K+D+E R +T LA LG ++E S+K+ ++ + I LA I+ Sbjct: 328 IVGYKTDLEAQRKITMGDALTLADWLGYKYVEMSSKDTEDHSSIIKALAHSIR 380 >1MOZ-A nrPDB Length = 183 Score = 138 bits (347), Expect = 3e-33, Method: Composition-based stats. Identities = 45/171 (26%), Positives = 77/171 (45%), Gaps = 10/171 (5%) Query: 18 DSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTA 77 + ++IL++G G GK+ +L R + + TIG F ++T+ K +KL +WD Sbjct: 16 NKELRILILGLDGAGKTTILYRLQIGEVVTT-KPTIG--FNVETLSY--KNLKLNVWDLG 70 Query: 78 GQERFRTITTAYYRGAMGIILVYDVTDERTFTNI-KQWFKTVNEHANDEAQLLLVGNKSD 136 GQ R YY +I V D TD+ + K+ + E +A LL+ NK D Sbjct: 71 GQTSIRPYWRCYYADTAAVIFVVDSTDKDRMSTASKELHLMLQEEELQDAALLVFANKQD 130 Query: 137 METRVVTADQGEAL----AKELGIPFIESSAKNDDNVNEIFFTLAKLIQEK 183 + ++ + L K+ + SSA + + E L +I+E+ Sbjct: 131 QPGALSASEVSKELNLVELKDRSWSIVASSAIKGEGITEGLDWLIDVIKEE 181 >4ILE-A nrPDB Length = 184 Score = 136 bits (344), Expect = 5e-33, Method: Composition-based stats. Identities = 43/168 (25%), Positives = 74/168 (44%), Gaps = 12/168 (7%) Query: 20 IMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQ 79 M++ L+G GK+ + +FN I T+G + + I V ++LWD GQ Sbjct: 22 EMELTLVGLQYSGKTTFVNVIASGQFNEDMIPTVGFNMR----KITKGNVTIKLWDIGGQ 77 Query: 80 ERFRTITTAYYRGAMGIILVYDVTDERTFTNIK-QWFKTVNEHANDEAQLLLVGNKSDME 138 RFR++ Y RG I+ + D D+ K + +++ +L++GNK D+ Sbjct: 78 PRFRSMWERYCRGVSAIVYMVDAADQEKIEASKNELHNLLDKPQLQGIPVLVLGNKRDLP 137 Query: 139 TRVVTADQGEAL----AKELGIPFIESSAKNDDNVNEIFFTLAKLIQE 182 + + E + ++ I S K DN++ TL LIQ Sbjct: 138 GALDEKELIEKMNLSAIQDREICCYSISCKEKDNID---ITLQWLIQH 182 >2AL7-A nrPDB Length = 186 Score = 136 bits (342), Expect = 1e-32, Method: Composition-based stats. Identities = 39/168 (23%), Positives = 72/168 (42%), Gaps = 12/168 (7%) Query: 20 IMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQ 79 M++ L+G GK+ + +F+ I T+G + + + V +++WD GQ Sbjct: 22 EMELTLVGLQYSGKTTFVNVIASGQFSEDMIPTVGFNMR----KVTKGNVTIKIWDIGGQ 77 Query: 80 ERFRTITTAYYRGAMGIILVYDVTDERTFTNIK-QWFKTVNEHANDEAQLLLVGNKSDME 138 RFR++ Y RG I+ + D D + + +++ +L++GNK D+ Sbjct: 78 PRFRSMWERYCRGVNAIVYMIDAADREKIEASRNELHNLLDKPQLQGIPVLVLGNKRDLP 137 Query: 139 TRVVTADQGEAL----AKELGIPFIESSAKNDDNVNEIFFTLAKLIQE 182 + E + ++ I S K DN++ TL LIQ Sbjct: 138 NALDEKQLIEKMNLSAIQDREICCYSISCKEKDNID---ITLQWLIQH 182 >1Z6X-A nrPDB Length = 180 Score = 134 bits (339), Expect = 2e-32, Method: Composition-based stats. Identities = 39/172 (22%), Positives = 73/172 (42%), Gaps = 18/172 (10%) Query: 21 MKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQE 80 M+IL++G GK+ +L + K T I F ++TV+ K + +WD GQ+ Sbjct: 18 MRILMVGLDAAGKTTILYKL---KLGEIVTTIPTIGFNVETVEY--KNICFTVWDVGGQD 72 Query: 81 RFRTITTAYYRGAMGIILVYDVTDERTFTNI-KQWFKTVNEHANDEAQLLLVGNKSDMET 139 R R + Y++ G+I V D D + + K + +A LLL NK D+ Sbjct: 73 RIRPLWKHYFQNTQGLIFVVDSNDRERIQEVADELQKMLLVDELRDAVLLLFANKQDLPN 132 Query: 140 RVVTADQGEALAKELGIPFIE--------SSAKNDDNVNEIFFTLAKLIQEK 183 + ++ + +LG+ + + A + E L+ + ++ Sbjct: 133 AMAISE----MTDKLGLQSLRNRTWYVQATCATQGTGLYEGLDWLSNELSKR 180 >5HZH-A nrPDB Length = 332 Score = 134 bits (337), Expect = 3e-32, Method: Composition-based stats. Identities = 37/142 (26%), Positives = 62/142 (43%), Gaps = 16/142 (11%) Query: 55 IDFKIKTVDINGKKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIK-Q 113 ID K + GK V L LWDTAG E + + Y ++ + + +F N++ + Sbjct: 189 IDEAAKELGSGGKPVNLGLWDTAGLEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAK 248 Query: 114 WFKTVNEHANDEAQLLLVGNKSDMETR-------------VVTADQGEALAKELG-IPFI 159 W+ V H ++LVG K D+ +T QG A+AKE+G + ++ Sbjct: 249 WYPEVRHHCP-NTPIILVGTKLDLRDDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYL 307 Query: 160 ESSAKNDDNVNEIFFTLAKLIQ 181 E SA + +F + + Sbjct: 308 ECSALTQRGLKTVFDEAIRAVL 329 Score = 66.4 bits (161), Expect = 8e-12, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 28/49 (57%), Gaps = 1/49 (2%) Query: 18 DSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDING 66 +K +++GD VGK+CLL+ + + F +I T+ ++ V ++G Sbjct: 4 MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYS-ANVMVDG 51 >3C5C-A nrPDB Length = 187 Score = 131 bits (331), Expect = 2e-31, Method: Composition-based stats. Identities = 49/182 (26%), Positives = 83/182 (45%), Gaps = 10/182 (5%) Query: 10 SSGNGKSYDS---IMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDING 66 SSG Y + + ++G G GKS L V+F+ +F + + + + ++ Sbjct: 8 SSGRENLYFQGPLEVNLAILGRRGAGKSALTVKFLTKRFISEYDPNLEDTYSSEE-TVDH 66 Query: 67 KKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDE- 125 + V L++ DTA + R Y A ++VY V ++F + + + + HA + Sbjct: 67 QPVHLRVMDTADLDTPRNCER-YLNWAHAFLVVYSVDSRQSFDSSSSYLELLALHAKETQ 125 Query: 126 --AQLLLVGNKSDMET-RVVTADQGEALAKELGIPFIESSAKND-DNVNEIFFTLAKLIQ 181 LL+GNK DM R VT +G ALA G F E SA D ++V +F + + Sbjct: 126 RSIPALLLGNKLDMAQYRQVTKAEGVALAGRFGCLFFEVSACLDFEHVQHVFHEAVREAR 185 Query: 182 EK 183 + Sbjct: 186 RE 187 >6HLU-A nrPDB Length = 974 Score = 131 bits (330), Expect = 2e-31, Method: Composition-based stats. Identities = 44/186 (23%), Positives = 77/186 (41%), Gaps = 15/186 (8%) Query: 8 SASSGNGKSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTV-DING 66 + S G + +K+ LIGD GK+ LL + + + F+P T G++ K +I G Sbjct: 468 ARSKGEALVHLQEIKVHLIGDGMAGKTSLLKQLIGETFDPKESQTHGLNVVTKQAPNIKG 527 Query: 67 -------KKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVN 119 K+ WD GQE + + +L + D RT +N W + + Sbjct: 528 LENDDELKECLFHFWDFGGQEIMHASHQFFMTRSSVYML---LLDSRTDSNKHYWLRHIE 584 Query: 120 EHANDEAQLLLVGNKSDMETRVVTADQGEALAK--ELGIPFIESSAKNDDNVNEIFFTLA 177 ++ ++ +++V NK D E +Q + + + F S KN D V I +L Sbjct: 585 KYGG-KSPVIVVMNKID-ENPSYNIEQKKINERFPAIENRFHRISCKNGDGVESIAKSLK 642 Query: 178 KLIQEK 183 + Sbjct: 643 SAVLHP 648 >3DPU-A nrPDB Length = 535 Score = 131 bits (329), Expect = 3e-31, Method: Composition-based stats. Identities = 44/186 (23%), Positives = 77/186 (41%), Gaps = 15/186 (8%) Query: 8 SASSGNGKSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTV-DING 66 + S G + +K+ LIGD GK+ LL + + + F+P T G++ K +I G Sbjct: 29 ARSKGEALVHLQEIKVHLIGDGMAGKTSLLKQLIGETFDPKESQTHGLNVVTKQAPNIKG 88 Query: 67 -------KKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVN 119 K+ WD GQE + + +L + D RT +N W + + Sbjct: 89 LENDDELKECLFHFWDFGGQEIMHASHQFFMTRSSVYML---LLDSRTDSNKHYWLRHIE 145 Query: 120 EHANDEAQLLLVGNKSDMETRVVTADQGEALAK--ELGIPFIESSAKNDDNVNEIFFTLA 177 ++ ++ +++V NK D E +Q + + + F S KN D V I +L Sbjct: 146 KYGG-KSPVIVVMNKID-ENPSYNIEQKKINERFPAIENRFHRISCKNGDGVESIAKSLK 203 Query: 178 KLIQEK 183 + Sbjct: 204 SAVLHP 209 >2X77-A nrPDB Length = 189 Score = 129 bits (326), Expect = 7e-31, Method: Composition-based stats. Identities = 37/171 (21%), Positives = 70/171 (40%), Gaps = 10/171 (5%) Query: 18 DSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTA 77 D +++L++G GK+ +L R T + ++T+ K + ++WD Sbjct: 20 DRKIRVLMLGLDNAGKTSILYRL---HLGDVVTTVPTVGVNLETLQY--KNISFEVWDLG 74 Query: 78 GQERFRTITTAYYRGAMGIILVYDVTDERTF-TNIKQWFKTVNEHANDEAQLLLVGNKSD 136 GQ R Y+ +I V D TD + + ++E ++ LL+ NK D Sbjct: 75 GQTGVRPYWRCYFSDTDAVIYVVDSTDRDRMGVAKHELYALLDEDELRKSLLLIFANKQD 134 Query: 137 METRVVTADQGEALAKE----LGIPFIESSAKNDDNVNEIFFTLAKLIQEK 183 + A+ E L ++SS+K D + E L + ++E+ Sbjct: 135 LPDAASEAEIAEQLGVSSIMNRTWTIVKSSSKTGDGLVEGMDWLVERLREQ 185 >1YZG-A nrPDB Length = 179 Score = 129 bits (324), Expect = 1e-30, Method: Composition-based stats. Identities = 36/168 (21%), Positives = 69/168 (41%), Gaps = 10/168 (5%) Query: 18 DSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTA 77 + K++++G GK+ +L +F+ ++ + TIG + + V K +WD Sbjct: 14 NQEHKVIIVGLDNAGKTTILYQFLMNEVVHT-SPTIGSNVEEIVV----KNTHFLMWDIG 68 Query: 78 GQERFRTITTAYYRGAMGIILVYDVTDERTFT-NIKQWFKTVNEHANDEAQLLLVGNKSD 136 GQE R+ YY IILV D D ++ ++ + +A +L+ NK D Sbjct: 69 GQESLRSSWNTYYSNTEFIILVVDSIDRERLAITKEELYRMLAHEDLRKAAVLIFANKQD 128 Query: 137 METRVVTADQGEALA----KELGIPFIESSAKNDDNVNEIFFTLAKLI 180 M+ + A+ + L K+ A + + + + I Sbjct: 129 MKGCMTAAEISKYLTLSSIKDHPWHIQSCCALTGEGLCQGLEWMTSRI 176 >4ZI3-A nrPDB Length = 190 Score = 126 bits (317), Expect = 7e-30, Method: Composition-based stats. Identities = 42/171 (24%), Positives = 68/171 (39%), Gaps = 10/171 (5%) Query: 18 DSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTA 77 D ++ILL+G GK+ LL + + + T F IK+V G KL +WD Sbjct: 15 DQEVRILLLGLDNAGKTTLLKQLASEDISHI---TPTQGFNIKSVQSQG--FKLNVWDIG 69 Query: 78 GQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDE-AQLLLVGNKSD 136 GQ + R +Y+ +I V D D + F Q + E +L+ NK D Sbjct: 70 GQRKIRPYWRSYFENTDILIYVIDSADRKRFEETGQELTELLEEEKLSCVPVLIFANKQD 129 Query: 137 METRVVTADQGEAL----AKELGIPFIESSAKNDDNVNEIFFTLAKLIQEK 183 + T ++ E L ++ SA + V + + K + K Sbjct: 130 LLTAAPASEIAEGLNLHTIRDRVWQIQSCSALTGEGVQDGMNWVCKNVNAK 180 >2H16-A nrPDB Length = 183 Score = 124 bits (313), Expect = 2e-29, Method: Composition-based stats. Identities = 33/168 (19%), Positives = 71/168 (42%), Gaps = 10/168 (5%) Query: 19 SIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAG 78 K++++G GK+ +L +F ++ + TIG + + ++ + +WD G Sbjct: 21 QEHKVIIVGLDNAGKTTILYQFSMNEVVHT-SPTIGSNVEEIVIN----NTRFLMWDIGG 75 Query: 79 QERFRTITTAYYRGAMGIILVYDVTDERTFTNI-KQWFKTVNEHANDEAQLLLVGNKSDM 137 QE R+ YY +I+V D TD + ++ +K + +A LL+ NK D+ Sbjct: 76 QESLRSSWNTYYTNTEFVIVVVDSTDRERISVTREELYKMLAHEDLRKAGLLIFANKQDV 135 Query: 138 ETRVVTADQGEALA----KELGIPFIESSAKNDDNVNEIFFTLAKLIQ 181 + + A+ + L K+ A + + + + ++ Sbjct: 136 KECMTVAEISQFLKLTSIKDHQWHIQACCALTGEGLCQGLEWMMSRLK 183 >1KSG-A nrPDB Length = 186 Score = 122 bits (306), Expect = 1e-28, Method: Composition-based stats. Identities = 41/175 (23%), Positives = 75/175 (42%), Gaps = 10/175 (5%) Query: 15 KSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLW 74 K + +++L++G GK+ +L +F + + T+G F IKT++ G KL +W Sbjct: 13 KQKERELRLLMLGLDNAGKTTILKKF-NGEDVDTISPTLG--FNIKTLEHRG--FKLNIW 67 Query: 75 DTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFK-TVNEHANDEAQLLLVGN 133 D GQ+ R+ Y+ G+I V D D + + ++ + + E A LL+ N Sbjct: 68 DVGGQKSLRSYWRNYFESTDGLIWVVDSADRQRMQDCQRELQSLLVEERLAGATLLIFAN 127 Query: 134 KSDMETRVVTADQGEALA----KELGIPFIESSAKNDDNVNEIFFTLAKLIQEKI 184 K D+ + EAL + SA +++ L I ++ Sbjct: 128 KQDLPGALSCNAIQEALELDSIRSHHWRIQGCSAVTGEDLLPGIDWLLDDISSRV 182 >2YC4-C nrPDB Length = 208 Score = 122 bits (306), Expect = 2e-28, Method: Composition-based stats. Identities = 45/176 (25%), Positives = 82/176 (46%), Gaps = 10/176 (5%) Query: 22 KILLIGDSGVGKSCLLVRFVED--KFNPSFITTIGIDFKIKTVDINGKKVKLQLW--DTA 77 K+ ++G++ VGKS L+ F KF + T G++ + V I V ++L+ DTA Sbjct: 22 KVAVVGEATVGKSALISMFTSKGSKFLKDYAMTSGVEVVVAPVTIPDTTVSVELFLLDTA 81 Query: 78 GQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDE---AQLLLVGNK 134 G + ++ + Y+ G ILV+DV+ +F + K WF+ + D + +LV NK Sbjct: 82 GSDLYKEQISQYWNGVYYAILVFDVSSMESFESCKAWFELLKSARPDRERPLRAVLVANK 141 Query: 135 SDMETR--VVTADQGEALAKELGIPFIESSAK-NDDNVNEIFFTLAKLIQEKIDSN 187 +D+ + V D + A + F + SA + + F ++A + Sbjct: 142 TDLPPQRHQVRLDMAQDWATTNTLDFFDVSANPPGKDADAPFLSIATTFYRNYEDK 197 >3BH6-A nrPDB Length = 164 Score = 120 bits (302), Expect = 4e-28, Method: Composition-based stats. Identities = 40/167 (23%), Positives = 66/167 (39%), Gaps = 10/167 (5%) Query: 19 SIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAG 78 S ++ILL+G GK+ LL + + + T F IK+V G KL +WD G Sbjct: 3 SEVRILLLGLDNAGKTTLLKQLASEDISHI---TPTQGFNIKSVQSQG--FKLNVWDIGG 57 Query: 79 QERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDE-AQLLLVGNKSDM 137 + R +Y+ +I V D D + F Q + E +L+ NK D+ Sbjct: 58 LRKIRPYWRSYFENTDILIYVIDSADRKRFEETGQELTELLEEEKLSCVPVLIFANKQDL 117 Query: 138 ETRVVTADQGEAL----AKELGIPFIESSAKNDDNVNEIFFTLAKLI 180 T ++ E L ++ SA + V + + K + Sbjct: 118 LTAAPASEIAEGLNLHTIRDRVWQIQSCSALTGEGVQDGMNWVCKNV 164 >4V0N-A nrPDB Length = 169 Score = 120 bits (302), Expect = 4e-28, Method: Composition-based stats. Identities = 32/164 (19%), Positives = 70/164 (42%), Gaps = 10/164 (6%) Query: 23 ILLIGDSGVGKSCLLVRFV-EDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQER 81 +L++G GK+ ++ R + T+G ++ + ++D +G R Sbjct: 9 VLVVGLDNSGKTTIIERLKPRPRQAAEVAPTVGFTVD----EVEKGPLTFTVFDMSGAGR 64 Query: 82 FRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHAN-DEAQLLLVGNKSDMETR 140 +RT+ YYR A ++ V D D+ + + + +H+N + +L NK D+ Sbjct: 65 YRTLWEQYYREADAVVFVVDSADKLRMVVARDEMEHMLKHSNMRKVPILYFANKKDLPVA 124 Query: 141 VVTADQGEAL----AKELGIPFIESSAKNDDNVNEIFFTLAKLI 180 + + +AL K+ + S+ + V++ LA+ + Sbjct: 125 MPPVEIAQALGLDDIKDRPWQIVPSNGLTGEGVDKGIDWLAERL 168 >4WNR-A nrPDB Length = 349 Score = 117 bits (293), Expect = 4e-27, Method: Composition-based stats. Identities = 41/166 (24%), Positives = 66/166 (39%), Gaps = 10/166 (6%) Query: 20 IMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQ 79 +K+LL+GD GK+ LL R + + F+ + T GI+ K K++K+ WD GQ Sbjct: 41 EVKVLLVGDGEAGKTSLLKRLLGEGFDGNEHQTQGINIKKWGFKDKDKEIKVNFWDFGGQ 100 Query: 80 ERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSDMET 139 E + ILV D R + W K + ++ +L+ NK D Sbjct: 101 EIMHATHQFFLSKRSLYILV---LDSRRDEKAEYWLKHIRSFGG-DSPVLVALNKID--- 153 Query: 140 RVVTADQGEALAKEL--GIP-FIESSAKNDDNVNEIFFTLAKLIQE 182 + + +E I F S K D + L K + + Sbjct: 154 ENPSFELNRKFLQEKYPSIKGFFRISCKEDRGIEGFSQKLKKELLK 199 >5DE3-A nrPDB Length = 169 Score = 116 bits (291), Expect = 7e-27, Method: Composition-based stats. Identities = 36/167 (21%), Positives = 68/167 (40%), Gaps = 10/167 (5%) Query: 22 KILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQER 81 +IL++G GK+ +L E+ + T G F IK++ +G L++WD GQ+ Sbjct: 2 RILVLGLDNAGKTTILKALSEEDI-TTITPTQG--FNIKSLSRDG--FNLKIWDIGGQKS 56 Query: 82 FRTITTAYYRGAMGIILVYDVTDERTFTNIK-QWFKTVNEHANDEAQLLLVGNKSDMETR 140 R Y+ +I V D D + + + + + + E LL+ NK D+ Sbjct: 57 IRPYWRNYFDQTDALIYVIDSADSKRLSESEFELTELLQEEKMTGVPLLVFANKQDLVGA 116 Query: 141 VVTADQGEAL----AKELGIPFIESSAKNDDNVNEIFFTLAKLIQEK 183 + + L ++ SAK + E + K ++ + Sbjct: 117 LAADEIASTLDLTSIRDRPWQIQACSAKQGTGLKEGMEWMMKQVKLE 163 >2H57-A nrPDB Length = 190 Score = 116 bits (290), Expect = 9e-27, Method: Composition-based stats. Identities = 36/178 (20%), Positives = 66/178 (37%), Gaps = 12/178 (6%) Query: 12 GNGKSYDSIMKILLIGDSGVGKSCLLVRFV-EDKFNPSFITTIGIDFKIKTVDINGKKVK 70 G + +L +G GK+ ++ + + + + + TIG + + Sbjct: 13 GLVPRGSKEVHVLCLGLDNSGKTTIINKLKPSNAQSQNILPTIGFSIE----KFKSSSLS 68 Query: 71 LQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHA---NDEAQ 127 ++D +GQ R+R + YY+ II V D +D K+ T+ H + Sbjct: 69 FTVFDMSGQGRYRNLWEHYYKEGQAIIFVIDSSDRLRMVVAKEELDTLLNHPDIKHRRIP 128 Query: 128 LLLVGNKSDMETRVVTADQGEALA----KELGIPFIESSAKNDDNVNEIFFTLAKLIQ 181 +L NK D+ V + + L K+ S A + + E L IQ Sbjct: 129 ILFFANKMDLRDAVTSVKVSQLLCLENIKDKPWHICASDAIKGEGLQEGVDWLQDQIQ 186 >3D6T-B nrPDB Length = 171 Score = 107 bits (269), Expect = 3e-24, Method: Composition-based stats. Identities = 38/149 (25%), Positives = 72/149 (48%), Gaps = 11/149 (7%) Query: 21 MKILLIGDSGVGKSCLLVRFVEDKFNPS--FITTIGIDFKIKTVDINGKKVK---LQLWD 75 MK++++G++G GK+ LL + ++ K + T+GID K + I K+ + L +WD Sbjct: 1 MKLMIVGNTGSGKTTLLQQLMKTKKSDLGMQSATVGIDVKDWPIQIRDKRKRDLVLNVWD 60 Query: 76 TAGQERFRTITTAYYRGAMGIILVYDVTD-ERTFTNIKQWFKTVNEHANDEAQLLLVGNK 134 AG+E F + + + VYD++ + +K W + A+ + ++LVG Sbjct: 61 FAGREEFYSTHPHFMTQRALYLAVYDLSKGQAEVDAMKPWLFNIKARAS-SSPVILVGTH 119 Query: 135 SDM---ETRVVT-ADQGEALAKELGIPFI 159 D+ + R + + L + G P I Sbjct: 120 LDVSDEKQRKACMSKITKELLNKRGFPAI 148 >5DI3-B nrPDB Length = 263 Score = 89.9 bits (222), Expect = 7e-19, Method: Composition-based stats. Identities = 30/129 (23%), Positives = 53/129 (41%), Gaps = 6/129 (4%) Query: 23 ILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQERF 82 I L+G GK+ LL ++ + + T G + + +N K K++++D G + Sbjct: 7 IALLGLDNAGKTTLLNS-IQGEVDRDTTPTFGFN----STTLNEGKYKIEVFDLGGGKNI 61 Query: 83 RTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHA-NDEAQLLLVGNKSDMETRV 141 R + Y I+ V D D F K V E+ + + + NK D+ T Sbjct: 62 RGVWKKYLAEVHAIVYVVDAADPGRFEESKMTMAEVLENQFMRDKPICIFANKQDLPTAA 121 Query: 142 VTADQGEAL 150 A+ + L Sbjct: 122 PAAEVVKGL 130 >4M9Q-A nrPDB Length = 227 Score = 89.9 bits (222), Expect = 8e-19, Method: Composition-based stats. Identities = 30/129 (23%), Positives = 53/129 (41%), Gaps = 6/129 (4%) Query: 23 ILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQERF 82 I L+G GK+ LL ++ + + T G + + +N K K++++D G + Sbjct: 7 IALLGLDNAGKTTLLNS-IQGEVDRDTTPTFGFN----STTLNEGKYKIEVFDLGGGKNI 61 Query: 83 RTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHA-NDEAQLLLVGNKSDMETRV 141 R + Y I+ V D D F K V E+ + + + NK D+ T Sbjct: 62 RGVWKKYLAEVHAIVYVVDAADPGRFEESKMTMAEVLENQFMRDKPICIFANKQDLPTAA 121 Query: 142 VTADQGEAL 150 A+ + L Sbjct: 122 PAAEVVKGL 130 >4BAS-A nrPDB Length = 199 Score = 89.5 bits (221), Expect = 1e-18, Method: Composition-based stats. Identities = 31/171 (18%), Positives = 65/171 (38%), Gaps = 16/171 (9%) Query: 21 MKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQE 80 +++++ G GK+ ++ + + + I T + + ++T + +V ++D G + Sbjct: 18 LQVVMCGLDNSGKTTIINQVKPAQSSSKHI-TATVGYNVETFE--KGRVAFTVFDMGGAK 74 Query: 81 RFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHAN--------DEAQLLLVG 132 +FR + YY +I V D +D +K + + +H + L Sbjct: 75 KFRGLWETYYDNIDAVIFVVDSSDHLRLCVVKSEIQAMLKHEDIRRELPGGGRVPFLFFA 134 Query: 133 NKSDMETRVVTADQGE-----ALAKELGIPFIESSAKNDDNVNEIFFTLAK 178 NK D A+ E L + S+ V+E F L + Sbjct: 135 NKMDAAGAKTAAELVEILDLTTLMGDHPFVIFASNGLKGTGVHEGFSWLQE 185 >3IHW-A nrPDB Length = 184 Score = 88.7 bits (219), Expect = 2e-18, Method: Composition-based stats. Identities = 40/179 (22%), Positives = 75/179 (41%), Gaps = 16/179 (8%) Query: 10 SSGNGKSYDS--IMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGK 67 SSG Y +K+ ++G+ GKS L+ R++ + G FK K + ++G+ Sbjct: 8 SSGRENLYFQGPELKVGIVGNLSSGKSALVHRYLTGTYVQEESPE-GGRFK-KEIVVDGQ 65 Query: 68 KVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHAN-DEA 126 L + D G + ++ V+ + DE +F + +F + N E Sbjct: 66 SYLLLIRDEGGPPEL-----QFAAWVDAVVFVFSLEDEISFQTVYNYFLRLCSFRNASEV 120 Query: 127 QLLLVGNKSD----METRVVTADQGEALAKELG-IPFIESSAKNDDNVNEIFFTLAKLI 180 ++LVG D RV+ + L+ +L + E+ A NV +F +A+ + Sbjct: 121 PMVLVGT-QDAISAANPRVIDDSRARKLSTDLKRCTYYETCATYGLNVERVFQDVAQKV 178 >1M2O-B nrPDB Length = 190 Score = 86.8 bits (214), Expect = 7e-18, Method: Composition-based stats. Identities = 31/171 (18%), Positives = 61/171 (35%), Gaps = 17/171 (9%) Query: 22 KILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQER 81 K+L +G GK+ LL D+ T+ + + ++ +K +D G + Sbjct: 25 KLLFLGLDNAGKTTLLHMLKNDRL-----ATLQPTWHPTSEELAIGNIKFTTFDLGGHIQ 79 Query: 82 FRTITTAYYRGAMGIILVYDVTDERTFTNIK-QWFKTVNEHANDEAQLLLVGNKSDMETR 140 R + Y+ GI+ + D D F + + N + +++GNK D Sbjct: 80 ARRLWKDYFPEVNGIVFLVDAADPERFDEARVELDALFNIAELKDVPFVILGNKIDAPNA 139 Query: 141 VVTADQ-----------GEALAKELGIPFIESSAKNDDNVNEIFFTLAKLI 180 V A+ + + + + S + E F L++ I Sbjct: 140 VSEAELRSALGLLNTTGSQRIEGQRPVEVFMCSVVMRNGYLEAFQWLSQYI 190 >6GNI-B nrPDB Length = 167 Score = 85.6 bits (211), Expect = 1e-17, Method: Composition-based stats. Identities = 30/167 (17%), Positives = 58/167 (34%), Gaps = 17/167 (10%) Query: 22 KILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQER 81 K+L +G GK+ LL D+ T+ + + ++ +K +D G + Sbjct: 3 KLLFLGLDNAGKTTLLHMLKNDRL-----ATLQPTWHPTSEELAIGNIKFTTFDLGGHIQ 57 Query: 82 FRTITTAYYRGAMGIILVYDVTDERTFTNIK-QWFKTVNEHANDEAQLLLVGNKSDMETR 140 R + Y+ GI+ + D D F + + N + +++GNK D Sbjct: 58 ARRLWKDYFPEVNGIVFLVDAADPERFDEARVELDALFNIAELKDVPFVILGNKIDAPNA 117 Query: 141 VVTADQ-----------GEALAKELGIPFIESSAKNDDNVNEIFFTL 176 V A+ + + + + S + E F L Sbjct: 118 VSEAELRSALGLLNTTGSQRIEGQRPVEVFMCSVVMRNGYLEAFQWL 164 >2GAO-A nrPDB Length = 208 Score = 80.6 bits (198), Expect = 4e-16, Method: Composition-based stats. Identities = 36/182 (19%), Positives = 64/182 (35%), Gaps = 24/182 (13%) Query: 17 YDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDT 76 Y K++ +G GK+ LL +D+ + T+ + + I G + +D Sbjct: 32 YKKSGKLVFLGLDNAGKTTLLHMLKDDRLGQ-HVPTLHPT--SEELTIAG--MTFTTFDL 86 Query: 77 AGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHAN-DEAQLLLVGNKS 135 G E+ R + Y GI+ + D D K + +L++GNK Sbjct: 87 GGHEQARRVWKNYLPAINGIVFLVDCADHSRLVESKVELNALMTDETISNVPILILGNKI 146 Query: 136 DMETRVVTADQGEAL--------------AKELGIPFIE---SSAKNDDNVNEIFFTLAK 178 D T ++ ++ + KEL +E S E F L++ Sbjct: 147 D-RTDAISEEKLREIFGLYGQTTGKGNVTLKELNARPMEVFMCSVLKRQGYGEGFRWLSQ 205 Query: 179 LI 180 I Sbjct: 206 YI 207 >2IWR-A nrPDB Length = 178 Score = 79.5 bits (195), Expect = 9e-16, Method: Composition-based stats. Identities = 36/178 (20%), Positives = 75/178 (42%), Gaps = 16/178 (8%) Query: 20 IMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQ 79 +++ ++GD+ GKS L+ RF+ + T +K + + ++G+ + + + AG Sbjct: 7 ELRLGVLGDARSGKSSLIHRFLTGSY-QVLEKTESEQYKKEML-VDGQTHLVLIREEAGA 64 Query: 80 ERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHAND---EAQLLLVGNKSD 136 + A +I V+ + DE +F + + ++ + L LVG D Sbjct: 65 PD-----AKFSGWADAVIFVFSLEDENSFQAVSRLHGQLSSLRGEGRGGLALALVGT-QD 118 Query: 137 ----METRVVTADQGEALAKELG-IPFIESSAKNDDNVNEIFFTLAKLIQEKIDSNKL 189 RVV + AL ++ + E+ A NV+ +F +A+ + +L Sbjct: 119 RISASSPRVVGDARARALCADMKRCSYYETCATYGLNVDRVFQEVAQKVVTLRKQQQL 176 >1F6B-A nrPDB Length = 198 Score = 78.7 bits (193), Expect = 2e-15, Method: Composition-based stats. Identities = 34/182 (18%), Positives = 64/182 (35%), Gaps = 24/182 (13%) Query: 17 YDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDT 76 Y K++ +G GK+ LL +D+ + T+ + + I G + +D Sbjct: 22 YKKTGKLVFLGLDNAGKTTLLHMLKDDRLGQ-HVPTLHPT--SEELTIAG--MTFTTFDL 76 Query: 77 AGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHAN-DEAQLLLVGNKS 135 G + R + Y GI+ + D D K+ ++ +L++GNK Sbjct: 77 GGHIQARRVWKNYLPAINGIVFLVDCADHERLLESKEELDSLMTDETIANVPILILGNKI 136 Query: 136 DMETRVVTADQGEAL--------------AKELGIPFIE---SSAKNDDNVNEIFFTLAK 178 D ++ ++ + KEL +E S E F +A+ Sbjct: 137 DRPEA-ISEERLREMFGLYGQTTGKGSVSLKELNARPLEVFMCSVLKRQGYGEGFRWMAQ 195 Query: 179 LI 180 I Sbjct: 196 YI 197 >6GDG-D nrPDB Length = 248 Score = 74.1 bits (181), Expect = 4e-14, Method: Composition-based stats. Identities = 27/129 (20%), Positives = 47/129 (36%), Gaps = 4/129 (3%) Query: 15 KSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLW 74 + Y + ++LL+G GKS ++ + F+ K ++ V ++ Sbjct: 30 QVYRATHRLLLLGADNSGKSTIVKQMRILHGGSGGSGGTSGIFETK-FQVDK--VNFHMF 86 Query: 75 DTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTV-NEHANDEAQLLLVGN 133 D GQ R + II V D +D FK++ N ++L N Sbjct: 87 DVGGQRDERRKWIQCFNDVTAIIFVVDSSDYNRLQEALNLFKSIWNNRWLRTISVILFLN 146 Query: 134 KSDMETRVV 142 K D+ V Sbjct: 147 KQDLLAEKV 155 >4C0K-A nrPDB Length = 423 Score = 73.3 bits (179), Expect = 7e-14, Method: Composition-based stats. Identities = 40/177 (22%), Positives = 71/177 (40%), Gaps = 29/177 (16%) Query: 15 KSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLW 74 +S S+ K +IG G GK+ + F+ IG +FK V+ +Q++ Sbjct: 241 QSSRSVYKCHVIGPKGSGKTGMCRGFL----VEDMHKLIGKEFKTNVVNCIN---SVQVY 293 Query: 75 DTAGQERFRTITTAYYRGA-----------MGIILVYDVTDERTFTNIKQWFKTVNEHAN 123 GQE+ + R A LVYD ++ R+F + + + + +A Sbjct: 294 ---GQEKHLILRDIDVRHALDPLQPQEVNCDVACLVYDSSNPRSFEYVARIY--IKYYAE 348 Query: 124 DEAQLLLVGNKSDMETRVVTAD-QGEALAKELGI--PFIESSAKNDDNVNEIFFTLA 177 + +++VG K DM+ R Q + + P + S N E++ LA Sbjct: 349 SKIPVMIVGTKCDMDERRQDYLMQPSEFCDKYKLLPPHLFS---LKTNKKELYTKLA 402 >6G79-A nrPDB Length = 225 Score = 66.4 bits (161), Expect = 8e-12, Method: Composition-based stats. Identities = 28/128 (21%), Positives = 47/128 (36%), Gaps = 4/128 (3%) Query: 11 SGNGKSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVK 70 +G S +K+LL+G GKS ++ + K G I K + Sbjct: 21 KEDGISAAKDVKLLLLGADNSGKSTIVKQM---KIIHGGSGGSGGTTGIVETHFTFKNLH 77 Query: 71 LQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTV-NEHANDEAQLL 129 +L+D GQ R + II D++D F ++ N + ++ Sbjct: 78 FRLFDVGGQRSERKKWIHCFEDVTAIIFCVDLSDYNRMHESLMLFDSICNNKFFIDTSII 137 Query: 130 LVGNKSDM 137 L NK D+ Sbjct: 138 LFLNKKDL 145 >5YMX-A nrPDB Length = 203 Score = 66.0 bits (160), Expect = 1e-11, Method: Composition-based stats. Identities = 33/184 (17%), Positives = 69/184 (37%), Gaps = 21/184 (11%) Query: 22 KILLIGDSGVGKSCLLVRFVEDK-----------FNPSFITTIGIDFKIKTV-DINGKKV 69 KI+ G GK+ L +++ +K + T+ DF ++ +I G K Sbjct: 14 KIVYYGPGLCGKTTNL-QYIYNKTAAETKGKLISLSTETDRTLFFDFLPLSLGEIRGFKT 72 Query: 70 KLQLWDTAGQERFRTITTAYYRGAMGIILVYDV------TDERTFTNIKQWFKTVNEHAN 123 + L+ GQ + +G G++ V D + + N++ + Sbjct: 73 RFHLYTVPGQVFYDASRKLILKGVDGVVFVADSQIERMEANMESLENLRINLAE-QGYDL 131 Query: 124 DEAQLLLVGNKSDMETRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEK 183 ++ ++ NK D+ VT ++ IP ++ A V + +AKL+ + Sbjct: 132 NKIPYVIQYNKRDLPNA-VTVEEMRKALNHRNIPEYQAVAPTGVGVFDTLKAVAKLVLTE 190 Query: 184 IDSN 187 + Sbjct: 191 LKKG 194 >3T1O-A nrPDB Length = 198 Score = 65.2 bits (158), Expect = 2e-11, Method: Composition-based stats. Identities = 33/181 (18%), Positives = 68/181 (37%), Gaps = 18/181 (9%) Query: 21 MKILLIGDSGVGKSC----LLVRFVEDKFNP------SFITTIGIDFKIKTV-DINGKKV 69 KI+ G GK+ + + E + T+ DF + ++ G K Sbjct: 15 FKIVYYGPGLSGKTTNLKWIYSKVPEGRKGEMVSLATEDERTLFFDFLPLDIGEVKGFKT 74 Query: 70 KLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTD---ERTFTNIKQWFKTVNEHA--ND 124 + L+ GQ + RG GI+ V D +++ + + E+ D Sbjct: 75 RFHLYTVPGQVFYNASRKLILRGVDGIVFVADSAPNRLRANAESMRNMRENLAEYGLTLD 134 Query: 125 EAQLLLVGNKSDMETRVVTADQGEALAKELG-IPFIESSAKNDDNVNEIFFTLAKLIQEK 183 + +++ NK D+ + + A+ G P +E+ A V E +++L+ + Sbjct: 135 DVPIVIQVNKRDLPDAL-PVEMVRAVVDPEGKFPVLEAVATEGKGVFETLKEVSRLVLAR 193 Query: 184 I 184 + Sbjct: 194 V 194 >2GJ9-A nrPDB Length = 172 Score = 65.2 bits (158), Expect = 2e-11, Method: Composition-based stats. Identities = 34/161 (21%), Positives = 59/161 (36%), Gaps = 22/161 (13%) Query: 21 MKILLIGDSGVGKSCLLVRFVEDK--FNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAG 78 MK+++ G GKS LL + T D + + I+G L + DTAG Sbjct: 5 MKVVIAGRPNAGKSSLLNALAGREAAIVTDIAGT-TRDVLREHIHIDGMP--LHIIDTAG 61 Query: 79 Q-------ERFRTITTAY--YRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLL 129 ER I A+ A ++ + D T + W + + Sbjct: 62 LREASDEVERIG-IERAWQEIEQADRVLFMVDGTTTDAVDPAEIW-PEFIARLPAKLPIT 119 Query: 130 LVGNKSDMETRVVTADQGEALAKELGIPFIESSAKNDDNVN 170 +V NK+D+ + +++ G I SA+ + V+ Sbjct: 120 VVRNKADI------TGETLGMSEVNGHALIRLSARTGEGVD 154 >6IAE-A nrPDB Length = 223 Score = 64.5 bits (156), Expect = 3e-11, Method: Composition-based stats. Identities = 43/219 (19%), Positives = 81/219 (36%), Gaps = 27/219 (12%) Query: 12 GNGKSYDSIMKILLIGDSGVGKSCLLVRF--VEDKFNPSFITTIGIDFKIKTVDING--- 66 G D ++KIL++G S GKS + D + T + + ++ Sbjct: 1 GAASMSDDLVKILVLGPSKSGKSTVTNFLAGTRDTPTKEYHETNPLRVLEVEIALDDTRR 60 Query: 67 --------KKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFK-- 116 KK +QLWD G + + A A GII V++ + + + W+K Sbjct: 61 SGRQAAGLKKAVVQLWDVGGSSKHQAGWPAIASNADGIIYVFNPEVKGSEKELLLWYKNF 120 Query: 117 -----TVNEHANDEAQL-----LLVGNKSDMETRVVTADQGEALAKEL-GIPFIESSAK- 164 +++ N + ++ L+ + S + V + + K+L GI +E+S Sbjct: 121 ALNQDELDDDNNFKMRVTDGHSLIFSHHSSLPEFAVGDNAIPPMPKQLQGIRALETSLDY 180 Query: 165 NDDNVNEIFFTLAKLIQEKIDSNKLVGVGNGKEGNISIN 203 DN E F L + I + + + + Sbjct: 181 QSDNFKEAFDALVEQIIASRLAAEENDLLQKEREAKDYP 219 >2LKD-A nrPDB Length = 178 Score = 62.5 bits (151), Expect = 1e-10, Method: Composition-based stats. Identities = 34/167 (20%), Positives = 58/167 (34%), Gaps = 15/167 (8%) Query: 32 GKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQERFRTITTAYYR 91 GK+ LL K I V +N KK+ DT G E F T+ + Sbjct: 20 GKTTLLDAIRHSKVTEQEAGGITQHIGAYQVTVNDKKITF--LDTPGHEAFTTMRARGAQ 77 Query: 92 GAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSDMETRVVTADQGEALA 151 +ILV D + Q + +N +++ NK D E + Sbjct: 78 VTDIVILVVAADDG----VMPQTVEAINHAKAANVPIIVAINKMDKPEANPDRVMQELME 133 Query: 152 -----KELG--IPFIESSAKNDDNVNEIFFTLAKLIQEKIDSNKLVG 191 +E G F + SAK + ++ + + L+ +++ K Sbjct: 134 YNLVPEEWGGDTIFCKLSAKTKEGLDHLLEMI--LLVSEMEELKANP 178 >6CES-A nrPDB Length = 313 Score = 61.0 bits (147), Expect = 4e-10, Method: Composition-based stats. Identities = 34/169 (20%), Positives = 66/169 (39%), Gaps = 42/169 (24%) Query: 22 KILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIK-------TVDINGKKVK---- 70 K+LL+G SG GK+ + + I ++ + T+D+ V+ Sbjct: 9 KVLLMGKSGSGKTSM-------------RSIIFANYIARDTRRLGATIDVEHSHVRFLGN 55 Query: 71 --LQLWDTAGQER-----FRTITTAYYRGAMGIILVYDVTDERTFTNIKQW---FKTVNE 120 L LWD GQ+ F + +R +I V+DV ++ + + + + Sbjct: 56 LVLNLWDCGGQDTFMENYFTSQRDNIFRNVEVLIYVFDVESRELEKDMHYYQSCLEAILQ 115 Query: 121 HANDEAQLLLVGNKSDM---ETRVVTADQGEA----LAKELGIPFIESS 162 ++ D LV +K D+ + R + + E L++ L +S Sbjct: 116 NSPDAKIFCLV-HKMDLVQEDQRDLIFKEREEDLRRLSRPLECACFRTS 163 >3K53-A nrPDB Length = 271 Score = 60.2 bits (145), Expect = 7e-10, Method: Composition-based stats. Identities = 33/181 (18%), Positives = 76/181 (41%), Gaps = 17/181 (9%) Query: 23 ILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQERF 82 + L+G+ VGK+ + + + + ++ K ++ K+ + D G Sbjct: 6 VALVGNPNVGKTTIFNALTGLRQHVGNWPGVTVEKKEGIMEYREKE--FLVVDLPG---I 60 Query: 83 RTIT---------TAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGN 133 ++T + ++V D+ D ++ F T+ + ++LV N Sbjct: 61 YSLTAHSIDELIARNFILDGNADVIV-DIVDSTCL--MRNLFLTLELFEMEVKNIILVLN 117 Query: 134 KSDMETRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEKIDSNKLVGVG 193 K D+ + + + KELG+P I ++AK + V E+ +A + + K+ +N ++ Sbjct: 118 KFDLLKKKGAKIDIKKMRKELGVPVIPTNAKKGEGVEELKRMIALMAEGKVTTNPIIPRY 177 Query: 194 N 194 + Sbjct: 178 D 178 >1XZP-A nrPDB Length = 482 Score = 59.4 bits (143), Expect = 1e-09, Method: Composition-based stats. Identities = 38/191 (19%), Positives = 80/191 (41%), Gaps = 26/191 (13%) Query: 21 MKILLIGDSGVGKSCLLVRFV-EDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAG- 78 ++++++G VGKS LL R + ED+ + I D + + I G + ++ DTAG Sbjct: 244 LRMVIVGKPNVGKSTLLNRLLNEDRAIVTDIPGTTRDVISEEIVIRG--ILFRIVDTAGV 301 Query: 79 -------QERF---RTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQL 128 ER RT+ A ++ V D + ++ + + Sbjct: 302 RSETNDLVERLGIERTLQE--IEKADIVLFVLDASSPL-DEEDRKILERIKNKRY----- 353 Query: 129 LLVGNKSDMETRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQE--KIDS 186 L+V NK D+ ++ + L + + ++ SA + + ++ ++ + QE + S Sbjct: 354 LVVINKVDVVEKINEEEIKNKLGTDRHM--VKISALKGEGLEKLEESIYRETQEIFERGS 411 Query: 187 NKLVGVGNGKE 197 + L+ K+ Sbjct: 412 DSLITNLRQKQ 422 >5J8B-z nrPDB Length = 679 Score = 57.5 bits (138), Expect = 4e-09, Method: Composition-based stats. Identities = 32/171 (18%), Positives = 66/171 (38%), Gaps = 28/171 (16%) Query: 32 GKSCLLVRFV-------EDKFNPSFITTIGIDFKIKTVDI------------NGKKVKLQ 72 GKS L R + + + F+ ++ ++ + + + I +G++ Sbjct: 90 GKSTLADRILELTHAVSDREMREQFLDSLELE-RERGITIKASAVRVTYRAKDGEEYVFH 148 Query: 73 LWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVG 132 L DT G F + G++LV D + + +++ EH + ++ Sbjct: 149 LIDTPGHVDFTYEVSRALAAVEGVLLVVDASQGVEAETLAKFY-MALEHGHVIIPVI--- 204 Query: 133 NKSDMETRVVTADQGEALAKELGIPF---IESSAKNDDNVNEIFFTLAKLI 180 NK D+ + + + LG+P I +S K + V EI + + I Sbjct: 205 NKIDLPNAR-PLEVALEVEEVLGLPADEAIFASGKTGEGVEEILEAIVQRI 254 >5IMR-C nrPDB Length = 610 Score = 57.5 bits (138), Expect = 4e-09, Method: Composition-based stats. Identities = 32/171 (18%), Positives = 66/171 (38%), Gaps = 28/171 (16%) Query: 32 GKSCLLVRFV-------EDKFNPSFITTIGIDFKIKTVDI------------NGKKVKLQ 72 GKS L R + + + F+ ++ ++ + + + I +G++ Sbjct: 21 GKSTLADRILELTHAVSDREMREQFLDSLELE-RERGITIKASAVRVTYRAKDGEEYVFH 79 Query: 73 LWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVG 132 L DT G F + G++LV D + + +++ EH + ++ Sbjct: 80 LIDTPGHVDFTYEVSRALAAVEGVLLVVDASQGVEAETLAKFY-MALEHGHVIIPVI--- 135 Query: 133 NKSDMETRVVTADQGEALAKELGIPF---IESSAKNDDNVNEIFFTLAKLI 180 NK D+ + + + LG+P I +S K + V EI + + I Sbjct: 136 NKIDLPNAR-PLEVALEVEEVLGLPADEAIFASGKTGEGVEEILEAIVQRI 185 >2E87-A nrPDB Length = 357 Score = 56.0 bits (134), Expect = 1e-08, Method: Composition-based stats. Identities = 36/174 (20%), Positives = 63/174 (36%), Gaps = 23/174 (13%) Query: 23 ILLIGDSGVGKSCLLVRFVEDKFNPSFIT--TIGIDFKIKTVDINGKKVKLQLWDTAGQ- 79 +++ G VGKS LL K + T GI+ + Q+ DT G Sbjct: 170 VVIAGHPNVGKSTLLKALTTAKPEIASYPFTTRGINVG----QFEDGYFRYQIIDTPGLL 225 Query: 80 ----------ERFRTITTAYYRGAMGIILVYDVTDERTF--TNIKQWFKTVNEHANDEAQ 127 E+ + Y II ++D ++ F F+ V+ + Sbjct: 226 DRPISERNEIEKQAILALRYL--GNLIIYIFDPSEHCGFPLEEQIHLFEEVHGEFK-DLP 282 Query: 128 LLLVGNKSDMETRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQ 181 L+V NK D+ + E KE G+ I+ SA ++ + + K ++ Sbjct: 283 FLVVINKIDVADEE-NIKRLEKFVKEKGLNPIKISALKGTGIDLVKEEIIKTLR 335 >2DYK-A nrPDB Length = 161 Score = 55.6 bits (133), Expect = 1e-08, Method: Composition-based stats. Identities = 28/171 (16%), Positives = 58/171 (33%), Gaps = 29/171 (16%) Query: 20 IMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAG- 78 + K++++G VGKS L R ++ + + G+ +K + + + L DT G Sbjct: 1 MHKVVIVGRPNVGKSSLFNRLLKKR-SAVVADVPGVTRDLKEGVVETDRGRFLLVDTGGL 59 Query: 79 ----------QERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQL 128 QE+ ++++ V T + Sbjct: 60 WSGDKWEKKIQEKVDRALE------DAEVVLFAVDGRAELTQADYEVAEYLRRKGK--PV 111 Query: 129 LLVGNKSDMETRVVTADQGEALAKELGIPF---IESSAKNDDNVNEIFFTL 176 +LV K D + L G+ F I +S+++ + E+ + Sbjct: 112 ILVATKVDDPKHEL------YLGPLYGLGFGDPIPTSSEHARGLEELLEAI 156 >3GEE-A nrPDB Length = 476 Score = 54.1 bits (129), Expect = 5e-08, Method: Composition-based stats. Identities = 36/168 (21%), Positives = 64/168 (38%), Gaps = 15/168 (8%) Query: 24 LLIGDSGVGKSCLLVRFV-EDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQ--- 79 ++ G GKS LL + +++ S + D+ + + +L DTAG Sbjct: 237 VIAGKPNAGKSTLLNTLLGQERAIVSHMPGTTRDYIEECFIHDKTMFRLT--DTAGLREA 294 Query: 80 -ERF--RTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEH--ANDEAQLLLVGNK 134 E I + + A +++Y + D T + + E A+ A+ L V NK Sbjct: 295 GEEIEHEGIRRSRMKMAEADLILY-LLDLGT-ERLDDELTEIRELKAAHPAAKFLTVANK 352 Query: 135 SDMETRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQE 182 D A+A G I SA N D ++ + + L++ Sbjct: 353 LD--RAANADALIRAIADGTGTEVIGISALNGDGIDTLKQHMGDLVKN 398 >6GB2-BC nrPDB Length = 657 Score = 54.1 bits (129), Expect = 5e-08, Method: Composition-based stats. Identities = 35/166 (21%), Positives = 64/166 (38%), Gaps = 15/166 (9%) Query: 32 GKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQERFRTITTAYYR 91 GK+ LL +F + + I V + + K+ DT G F + + Sbjct: 122 GKTTLLDKFRKTQVAAVETGGITQHIGAFLVSLPSGE-KITFLDTPGHAAFSAMRARGAQ 180 Query: 92 GAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSDMETRVVTADQGEALA 151 ++LV D +KQ +++ + + ++L NK D + E LA Sbjct: 181 VTDIVVLVVAADDG----VMKQTVESIQHAKDAQVPIILAVNKCDKAEADPEKVKKELLA 236 Query: 152 -----KELG--IPFIESSAKNDDN---VNEIFFTLAKLIQEKIDSN 187 ++ G + + SA DN + E LA++++ K D N Sbjct: 237 YDVVCEDYGGDVQAVPVSALTGDNLMALAEATVALAEMLELKADPN 282 >4ARZ-A nrPDB Length = 310 Score = 53.7 bits (128), Expect = 6e-08, Method: Composition-based stats. Identities = 29/127 (22%), Positives = 53/127 (41%), Gaps = 15/127 (11%) Query: 22 KILLIGDSGVGKSCLLVRFVED--KFNP-SFITTIGIDFKIKTVDINGKKVKLQLWDTAG 78 K+LL+G SG GKS + + F+ TI ++ + L LWD G Sbjct: 8 KLLLMGRSGSGKSSMRSIIFSNYSAFDTRRLGATIDVEHSHLRFL---GNMTLNLWDCGG 64 Query: 79 QE-----RFRTITTAYYRGAMGIILVYDVTDERTFTNIK---QWFKTVNEHANDEAQLLL 130 Q+ F ++ +I V+DV +I+ + K + +++ D +L Sbjct: 65 QDVFMENYFTKQKDHIFQMVQVLIHVFDVESTEVLKDIEIFAKALKQLRKYSPDAKIFVL 124 Query: 131 VGNKSDM 137 + +K D+ Sbjct: 125 L-HKMDL 130 >3CB4-D nrPDB Length = 599 Score = 52.9 bits (126), Expect = 1e-07, Method: Composition-based stats. Identities = 33/173 (19%), Positives = 60/173 (34%), Gaps = 32/173 (18%) Query: 32 GKSCL---LVRFVEDKFNPSFITTI----------GIDFKIKTVDIN-----GKKVKLQL 73 GKS L +++ + + GI K ++V ++ G+ +L Sbjct: 16 GKSTLSDRIIQICGGLSDREMEAQVLDSMDLERERGITIKAQSVTLDYKASDGETYQLNF 75 Query: 74 WDTAGQERFRTITTAYYRGAMGIILVYDV---TDERTFTNIKQWFKTVNEHANDEAQLLL 130 DT G F + G +LV D + +T N + + +++ Sbjct: 76 IDTPGHVDFSYEVSRSLAACEGALLVVDAGQGVEAQTLANCYTAMEM-------DLEVVP 128 Query: 131 VGNKSDMETRVVTADQGEALAKELGIPF---IESSAKNDDNVNEIFFTLAKLI 180 V NK D+ E + +GI + SAK V ++ L + I Sbjct: 129 VLNKIDLPAAD-PERVAEEIEDIVGIDATDAVRCSAKTGVGVQDVLERLVRDI 180 >2YWH-A nrPDB Length = 600 Score = 52.9 bits (126), Expect = 1e-07, Method: Composition-based stats. Identities = 38/170 (22%), Positives = 66/170 (38%), Gaps = 26/170 (15%) Query: 32 GKSCLLVRFVE-------DKFNPSFITTI------GIDFKIKTVDI-----NGKKVKLQL 73 GKS L R +E + + T+ GI K++ V + +G KL L Sbjct: 18 GKSTLADRLLEYTGAISEREKREQLLDTLDVERERGITVKMQAVRMFYKAKDGNTYKLHL 77 Query: 74 WDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGN 133 DT G F + G +L+ D + + ++K V + + ++ V N Sbjct: 78 IDTPGHVDFSYEVSRALAACEGALLLIDASQGIEAQTVANFWKAVEQ----DLVIIPVIN 133 Query: 134 KSDMETRVVTADQGEALAKELGI---PFIESSAKNDDNVNEIFFTLAKLI 180 K D+ + V + + + LG+ I +SAK + EI + I Sbjct: 134 KIDLPSADVDR-VKKQIEEVLGLDPEEAILASAKEGIGIEEILEAIVNRI 182 >2CXX-A nrPDB Length = 190 Score = 52.9 bits (126), Expect = 1e-07, Method: Composition-based stats. Identities = 42/195 (21%), Positives = 70/195 (35%), Gaps = 47/195 (24%) Query: 23 ILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAG---- 78 I+ G S VGKS L+ R K K ++I K K + D G Sbjct: 4 IIFAGRSNVGKSTLIYRLTGKKVRRGKRP----GVTRKIIEIEWKNHK--IIDMPGFGFM 57 Query: 79 -------QERFRTITTAYY----RGAMGIILVYDVTDERTFTNIKQW------------F 115 QER + + + +LV D + IK+W + Sbjct: 58 MGLPKEVQERIKDEIVHFIEDNAKNIDVAVLVVD--GKAAPEIIKRWEKRGEIPIDVEFY 115 Query: 116 KTVNEHANDEAQLLLVGNKSDMETRVVTADQGEALAKELGIP-------FIESSAKNDDN 168 + + E + ++ NK D V + LA++ +P FI SAK DN Sbjct: 116 QFLREL---DIPTIVAVNKLDKIKNV--QEVINFLAEKFEVPLSEIDKVFIPISAKFGDN 170 Query: 169 VNEIFFTLAKLIQEK 183 + + + ++I+E+ Sbjct: 171 IERLKNRIFEVIRER 185 >1WF3-A nrPDB Length = 301 Score = 52.5 bits (125), Expect = 1e-07, Method: Composition-based stats. Identities = 38/205 (18%), Positives = 71/205 (34%), Gaps = 52/205 (25%) Query: 23 ILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAG---- 78 + ++G VGKS LL + K P +++ + G++ ++ DT G Sbjct: 10 VAIVGKPNVGKSTLLNNLLGVKVAPISPRPQTTRKRLRGILTEGRR-QIVFVDTPGLHKP 68 Query: 79 ---------QERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLL 129 QE + + ++ V D+ T + + + + +L Sbjct: 69 MDALGEFMDQEVYEALA-----DVNAVVWVVDLRHPPTPED--ELVARALKPLVGKVPIL 121 Query: 130 LVGNKSD--------------------------METRVVTADQGEALAKELGIPFI--ES 161 LVGNK D ++ R V + + LA PF E Sbjct: 122 LVGNKLDAAKYPEEAMKAYHELLPEAEPRMLSALDERQVAELKADLLALMPEGPFFYPED 181 Query: 162 SAKNDDNVNEIFFTLAKLIQEKIDS 186 AK+D E +A++++E+ Sbjct: 182 YAKSDQTFGE---WVAEILREEAMK 203 >5ZZM-A nrPDB Length = 426 Score = 52.5 bits (125), Expect = 1e-07, Method: Composition-based stats. Identities = 41/188 (21%), Positives = 67/188 (35%), Gaps = 38/188 (20%) Query: 23 ILLIGDSGVGKSCLLVR------FVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDT 76 + L+G + GKS L R + D+ + T+ + V G+ V DT Sbjct: 200 VSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTL----RRIDVADVGETVLA---DT 252 Query: 77 AGQERFRTITTAYY-----------RGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDE 125 G F R A ++ V D D R NI+ + E E Sbjct: 253 VG---FIRHLPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAHE 309 Query: 126 AQLLLVGNKSDM----ETRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQ 181 LLV NK DM E R+ ++ + L SA+ + ++F L + + Sbjct: 310 IPTLLVMNKIDMLEDFEPRIDRDEENKPNRVWL-------SAQTGAGIPQLFQALTERLS 362 Query: 182 EKIDSNKL 189 ++ + L Sbjct: 363 GEVAQHTL 370 >3J8G-X nrPDB Length = 490 Score = 51.7 bits (123), Expect = 2e-07, Method: Composition-based stats. Identities = 39/175 (22%), Positives = 72/175 (41%), Gaps = 28/175 (16%) Query: 21 MKILLIGDSGVGKSCLLVRFVEDKFNPSFIT--TIGIDFKIKTVDINGKKVKLQLWDTAG 78 +K+ ++G VGKS L R + ++ + T I ++ +G++ L DTAG Sbjct: 203 IKLAIVGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYI-PMERDGREYVLI--DTAG 259 Query: 79 ----------QERFRTITT-AYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQ 127 E+F I T A ++LV D + + ++ +N + Sbjct: 260 VRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAREGISDQDLSLLGFILNSGRS---- 315 Query: 128 LLLVGNKSDMETRVVTADQGEALAKELGIPFIE------SSAKNDDNVNEIFFTL 176 L++V NK D ++ V E L + + FI+ SA + V +F ++ Sbjct: 316 LVIVVNKWDGLSQEVKEQVKETL--DFRLGFIDFARVHFISALHGSGVGNLFESV 368 Score = 36.7 bits (84), Expect = 0.007, Method: Composition-based stats. Identities = 26/124 (20%), Positives = 39/124 (31%), Gaps = 17/124 (13%) Query: 23 ILLIGDSGVGKSCLLVRF--VEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTA--- 77 + L+G VGKS L R D F + D K +I G++ DT Sbjct: 5 VALVGRPNVGKSTLFNRLTRTRDALVADF-PGLTRDRKYGRAEIEGRE--FICIDTGGID 61 Query: 78 GQERF--RTITTAY---YRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVG 132 G E + A ++ + D + K + LV Sbjct: 62 GTEDGVETRMAEQSLLAIEEADVVLFMVD-ARAGLMPADEAIAKHLRSREK---PTFLVA 117 Query: 133 NKSD 136 NK+D Sbjct: 118 NKTD 121 >3GEH-A nrPDB Length = 462 Score = 51.7 bits (123), Expect = 2e-07, Method: Composition-based stats. Identities = 34/177 (19%), Positives = 71/177 (40%), Gaps = 34/177 (19%) Query: 21 MKILLIGDSGVGKSCLLVRFVE-DKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAG- 78 +K+ ++G VGKS LL + + D+ + + D + + G V Q+ DTAG Sbjct: 225 LKVAIVGRPNVGKSSLLNAWSQSDRAIVTDLPGTTRDVVESQLVVGGIPV--QVLDTAGI 282 Query: 79 -----Q-ERFRTIT-TAYYRGAMGIILVYDVT------DERTFTNIKQWFKTVNEHANDE 125 Q E+ A ++L D D+ + +K Sbjct: 283 RETSDQVEKIGVERSRQAANTADLVLLTIDAATGWTTGDQEIYEQVKH------------ 330 Query: 126 AQLLLVGNKSDM-ETRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQ 181 L+LV NK D+ E +++T+ + ++ + ++A ++ + + +++Q Sbjct: 331 RPLILVMNKIDLVEKQLITSLEYPENITQI----VHTAAAQKQGIDSLETAILEIVQ 383 >1MKY-A nrPDB Length = 439 Score = 51.7 bits (123), Expect = 2e-07, Method: Composition-based stats. Identities = 42/181 (23%), Positives = 75/181 (41%), Gaps = 37/181 (20%) Query: 23 ILLIGDSGVGKSCLLVRFVEDKFNPSFITT-IGIDFKIKTVDINGKKVKLQLWDTAG--- 78 +L++G VGKS L + V+ K + D TV+ GK KL DT G Sbjct: 4 VLIVGRPNVGKSTLFNKLVKKKKAIVEDEEGVTRDPVQDTVEWYGKTFKL--VDTCGVFD 61 Query: 79 --QE----RFRTITTAYYRGAMGIILVYD----VTDERTFTNIKQWFKTVNEHANDEAQL 128 Q+ + + +T R A ++ V D +T E ++ + + Sbjct: 62 NPQDIISQKMKEVTLNMIREADLVLFVVDGKRGITKED--ESLADFLR------KSTVDT 113 Query: 129 LLVGNKSD-ME--TRVVTADQGEALAKELGIPFIE---SSAKNDDNVNEIFFTLAKLIQE 182 +LV NK++ + R V + + F E SA+++ N++ + T+ K ++E Sbjct: 114 ILVANKAENLREFEREVKPEL-------YSLGFGEPIPVSAEHNINLDTMLETIIKKLEE 166 Query: 183 K 183 K Sbjct: 167 K 167 Score = 45.6 bits (107), Expect = 2e-05, Method: Composition-based stats. Identities = 37/185 (20%), Positives = 65/185 (35%), Gaps = 27/185 (14%) Query: 12 GNGKSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGI--DFKIKTVDINGKKV 69 + +K+ ++G VGKS L + +K G D V I+G+K Sbjct: 172 ESKPEITDAIKVAIVGRPNVGKSTLFNAIL-NKERALVSPIPGTTRDPVDDEVFIDGRKY 230 Query: 70 KLQLWDTAGQ-----------ERFRTITTA-YYRGAMGIILVYDVTDERTFTNIKQWFKT 117 DTAG E++ A +++V D T T + + Sbjct: 231 VF--VDTAGLRRKSRVEPRTVEKYSNYRVVDSIEKADVVVIVLDATQGITRQDQR--MAG 286 Query: 118 VNEHANDEAQLLLVGNKSDM-ETRVVTADQGEALAKELGI-----PFIESSAKNDDNVNE 171 + E + ++ NK D+ R D+ L +E P I +SA N++ Sbjct: 287 LMERRGRASVVVF--NKWDLVVHREKRYDEFTKLFREKLYFIDYSPLIFTSADKGWNIDR 344 Query: 172 IFFTL 176 + + Sbjct: 345 MIDAM 349 >3IZY-P nrPDB Length = 537 Score = 51.4 bits (122), Expect = 3e-07, Method: Composition-based stats. Identities = 33/165 (20%), Positives = 61/165 (36%), Gaps = 15/165 (9%) Query: 32 GKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQERFRTITTAYYR 91 GK+ LL + + + I V + + K+ DT G F + + Sbjct: 16 GKTTLLDKLRKTQVAAMEAGGITQHIGAFLVSLPSGE-KITFLDTPGHAAFSAMRARGTQ 74 Query: 92 GAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSDMETRVVTADQGEALA 151 +ILV D +KQ +++ + ++L NK D + E LA Sbjct: 75 VTDIVILVVAADDG----VMKQTVESIQHAKDAHVPIVLAINKCDKAEADPEKVKKELLA 130 Query: 152 -----KELG--IPFIESSAKNDDN---VNEIFFTLAKLIQEKIDS 186 ++ G + + SA +N + E LA++++ K D Sbjct: 131 YDVVCEDYGGDVQAVHVSALTGENMMALAEATIALAEMLELKADP 175 >5KUT-A nrPDB Length = 189 Score = 51.0 bits (121), Expect = 3e-07, Method: Composition-based stats. Identities = 29/146 (19%), Positives = 56/146 (38%), Gaps = 30/146 (20%) Query: 25 LIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQERFRT 84 ++G GVGKS L F+ + I TV +N GQE++ Sbjct: 14 VVGACGVGKSAFLQAFLGRGLGHQDTREQPPGYAIDTVQVN------------GQEKYLI 61 Query: 85 ITTAYYRGAMGII------------LVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVG 132 + G G++ L++D +D ++F + +K + + + L V Sbjct: 62 LCEV---GTDGLLATSLDATCDVACLMFDGSDPKSFAHCASVYKH--HYMDGQTPCLFVS 116 Query: 133 NKSDMETRV-VTADQGEALAKELGIP 157 +K+D+ V V+ ++ +P Sbjct: 117 SKADLPEGVAVSGPSPAEFCRKHRLP 142 >5KU1-A nrPDB Length = 424 Score = 50.6 bits (120), Expect = 5e-07, Method: Composition-based stats. Identities = 33/145 (22%), Positives = 57/145 (39%), Gaps = 17/145 (11%) Query: 20 IMKILLIGDSGVGKS----CLLVRFV--EDKFNPSFITTIGIDFKIKTVDINGKKVKLQL 73 + + +IG GKS LL R + + K + + I TV + G++ L L Sbjct: 242 VFRCNVIGVKNCGKSGVLQALLGRNLMRQKKIREDHKS----YYAINTVYVYGQEKYLLL 297 Query: 74 WDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGN 133 D + E +T A + LVYDV++ ++F + FK + L+V Sbjct: 298 HDISESE---FLTEAEII-CDVVCLVYDVSNPKSFEYCARIFKQ--HFMDSRIPCLIVAA 351 Query: 134 KSDMETRVVTADQG-EALAKELGIP 157 KSD+ ++ +P Sbjct: 352 KSDLHEVKQEYSISPTDFCRKHKMP 376 >5KSO-A nrPDB Length = 190 Score = 50.6 bits (120), Expect = 5e-07, Method: Composition-based stats. Identities = 33/145 (22%), Positives = 57/145 (39%), Gaps = 17/145 (11%) Query: 20 IMKILLIGDSGVGKS----CLLVRFV--EDKFNPSFITTIGIDFKIKTVDINGKKVKLQL 73 + + +IG GKS LL R + + K + + I TV + G++ L L Sbjct: 8 VFRCNVIGVKNCGKSGVLQALLGRNLMRQKKIREDHKS----YYAINTVYVYGQEKYLLL 63 Query: 74 WDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGN 133 D + E +T A + LVYDV++ ++F + FK + L+V Sbjct: 64 HDISESE---FLTEAEII-CDVVCLVYDVSNPKSFEYCARIFKQ--HFMDSRIPCLIVAA 117 Query: 134 KSDMETRVVTADQG-EALAKELGIP 157 KSD+ ++ +P Sbjct: 118 KSDLHEVKQEYSISPTDFCRKHKMP 142 >6D4G-A nrPDB Length = 271 Score = 49.8 bits (118), Expect = 1e-06, Method: Composition-based stats. Identities = 24/102 (23%), Positives = 47/102 (46%), Gaps = 5/102 (4%) Query: 94 MGIILVYDVTD--ERTFTNIKQWFKTV-NEHANDEAQLLLVGNKSDMETRVVTADQGEAL 150 G +L DV+ R F + ++ + N+ A + +++V K D E Sbjct: 163 DGFLLGIDVSRGMNRNFDDQLKFVSNLYNQLAKTKKPIVIVLTKCD-EGVERYIRDAHTF 221 Query: 151 A-KELGIPFIESSAKNDDNVNEIFFTLAKLIQEKIDSNKLVG 191 A + + +E+SA+++ NV+ F TL +LI + K++ Sbjct: 222 ALSKKNLQVVETSARSNVNVDLAFSTLVQLIDKSRGKTKIIP 263 Score = 29.4 bits (65), Expect = 1.3, Method: Composition-based stats. Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 4/43 (9%) Query: 27 GDSGVGKSCLLVRFVE---DKFNPSFITTI-GIDFKIKTVDIN 65 G G+GKSCL RFV D+F+ + + DF + V+ + Sbjct: 34 GQCGIGKSCLCNRFVRPSADEFHLDHTSVLSTSDFGGRVVNND 76 >5DN8-A nrPDB Length = 446 Score = 49.4 bits (117), Expect = 1e-06, Method: Composition-based stats. Identities = 42/196 (21%), Positives = 73/196 (37%), Gaps = 39/196 (19%) Query: 21 MKILLIGDSGVGKSCLLVRFVEDKFNPSFIT--TIGIDFKIKTVDINGKKVKLQLWDTAG 78 +KI +IG VGKS L+ R + ++ + T I N + L DTAG Sbjct: 179 IKIAMIGRPNVGKSTLINRLLGEERVIVYDQPGTTRDSIYI-PFARNDENYTLI--DTAG 235 Query: 79 -------Q---ERFRTITT-AYYRGAMGIILVYD----VTDERTFTNIKQWFKTVNEHAN 123 Q E+F I + A +I + D VT++ + +N Sbjct: 236 IRRRAKIQDYVEKFSMIKSLQAMHAADVVIFLLDARQGVTEQD--------LRLLNRIVE 287 Query: 124 DEAQLLLVGNKSDMETRVVTADQGEALAKELGIPF------IESSAKNDDNVNEIFFTLA 177 L++ NK D + A + +PF SA + V ++F + Sbjct: 288 AGVSLIIAVNKWDGLN--IEERDNVRNAIDRRMPFVDFARRYFISALHGTGVGKLFRAIQ 345 Query: 178 K---LIQEKIDSNKLV 190 + IQ+++ + +L Sbjct: 346 ESYQSIQQELTTGQLT 361 Score = 34.4 bits (78), Expect = 0.035, Method: Composition-based stats. Identities = 26/168 (15%), Positives = 56/168 (33%), Gaps = 19/168 (11%) Query: 23 ILLIGDSGVGKSCLLVRFVEDKFNPS-FITTIGIDFKIKTVDINGKKVKLQLWDTAGQ-- 79 I ++G VGKS L + + + + D + I+ + +L L DT G Sbjct: 8 IAIVGRPNVGKSTLFNYLTKSRAALVADVPGVTRDRQYGETTIDSQ--RLLLVDTGGLVD 65 Query: 80 ---ERFRTIT----TAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVG 132 + + + I+ + D + + + + L Sbjct: 66 TENKEVAPLAETQVEQAIDESDCILFLVDA--KAGLVPADEIIAERLRKKGKK--IFLAV 121 Query: 133 NKSDMETRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLI 180 NK+D V Q + G P++ +A + V ++ + + + Sbjct: 122 NKADRARAAVV--QSDFYKLGFGEPYV-IAAASGRGVKDLMTQVLENL 166 >2GTP-A nrPDB Length = 323 Score = 49.4 bits (117), Expect = 1e-06, Method: Composition-based stats. Identities = 29/190 (15%), Positives = 58/190 (30%), Gaps = 53/190 (27%) Query: 47 PSFITTIGIDFKIKTVDING--------KKVKLQLWDTAGQERFRTITTAYYRGAMGIIL 98 P++I T D V G K + +++D GQ R + G II Sbjct: 134 PNYIPTQQ-DVLRTRVKTTGIVETHFTFKDLHFKMFDVGGQRSERKKWIHCFEGVTAIIF 192 Query: 99 VYDVTD-------ERTFTNIKQWFKTVNEHAND----EAQLLLVGNKSDMETRVV----- 142 ++D + + + K + N+ + ++L NK D+ + Sbjct: 193 CVALSDYDLVLAEDEEMNRMHESMKLFDSICNNKWFTDTSIILFLNKKDLFEEKIKKSPL 252 Query: 143 -----------TADQGEALAKELGIPF--------------IESSAKNDDNVNEIFFTLA 177 T ++ A + F + A + NV +F + Sbjct: 253 TICYPEYAGSNTYEEAAAY---IQCQFEDLNKRKDTKEIYTHFTCATDTKNVQFVFDAVT 309 Query: 178 KLIQEKIDSN 187 +I + + Sbjct: 310 DVIIKNNLKD 319 Score = 30.2 bits (67), Expect = 0.78, Method: Composition-based stats. Identities = 7/21 (33%), Positives = 13/21 (61%) Query: 19 SIMKILLIGDSGVGKSCLLVR 39 +K+LL+G GKS ++ + Sbjct: 1 REVKLLLLGAGESGKSTIVKQ 21 >5LAD-A nrPDB Length = 404 Score = 49.4 bits (117), Expect = 1e-06, Method: Composition-based stats. Identities = 34/172 (19%), Positives = 54/172 (31%), Gaps = 28/172 (16%) Query: 23 ILLIGDSGVGKSCLLVRFVED--KFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQE 80 I++ G VGKS + V + T V L DT G + Sbjct: 12 IVVAGRRNVGKSSFMNALVGQNVSIVSEYAGTTTDPVYKSMELYPVGPVTL--VDTPGLD 69 Query: 81 RFRTI--------TTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVG 132 + +YR A ILV D VN E ++V Sbjct: 70 DVGELGRLRVEKARRVFYR-ADCGILVTDS------EPTPYEDDVVNLFKEMEIPFVVVV 122 Query: 133 NKSDMETRVVTADQGEALAKELGIPF----IESSAKNDDNVNEIFFTLAKLI 180 NK D V ++ E L + + SA ++I T+++++ Sbjct: 123 NKID-----VLGEKAEELKGLYESRYEAKVLLVSALQKKGFDDIGKTISEIL 169 >1LNZ-A nrPDB Length = 342 Score = 49.0 bits (116), Expect = 2e-06, Method: Composition-based stats. Identities = 38/192 (19%), Positives = 72/192 (37%), Gaps = 26/192 (13%) Query: 9 ASSGNGKSYDSIMKIL----LIGDSGVGKSCLLVRF--VEDKFNPSFITTIGIDFKIKTV 62 G + +K+L L+G VGKS LL + K TT+ + + V Sbjct: 143 GEPGKERYIVLELKVLADVGLVGFPSVGKSTLLSVVSSAKPKIADYHFTTLVPNLGM--V 200 Query: 63 DINGKKVKLQLWD----TAGQERFRTITTAYYRG---AMGIILVYDVT---DERTFTNIK 112 + + + + D G + + + R I+ V D++ + + Sbjct: 201 ETDDGR-SFVMADLPGLIEGAHQGVGLGHQFLRHIERTRVIVHVIDMSGLEGRDPYDDYL 259 Query: 113 QWFKTVNEHAND--EAQLLLVGNKSDMETRVVTADQGEALAKEL--GIPFIESSAKNDDN 168 + ++E+ E ++V NK DM A+ EA ++L P SA + Sbjct: 260 TINQELSEYNLRLTERPQIIVANKMDMPEA---AENLEAFKEKLTDDYPVFPISAVTREG 316 Query: 169 VNEIFFTLAKLI 180 + E+ F +A + Sbjct: 317 LRELLFEVANQL 328 >5YT0-A nrPDB Length = 364 Score = 49.0 bits (116), Expect = 2e-06, Method: Composition-based stats. Identities = 40/201 (19%), Positives = 66/201 (32%), Gaps = 41/201 (20%) Query: 7 VSASSGNGKSYDSIMK---ILLIGDSGVGKSCLLVRF---------VEDKFNPSFITTIG 54 ++ G G + ++ ++++G GK+ LL + + + Sbjct: 1 MAGDKG-GGDGERRLRQPIVVVLGHVDHGKTTLLDKIRRTAVAAKEAGGITQHIGASIVP 59 Query: 55 IDFKIKTVDINGK--KVKLQL-----WDTAGQERFRTITTAYYRGAMGIILVYDVT---D 104 D K + K VKL + DT G E F + A ILV D+ Sbjct: 60 ADVIEKIAEPLKKVIPVKLVIPGLLFIDTPGHELFSNLRRRGGSVADFAILVVDIMEGFK 119 Query: 105 ERTFTNIKQWFKTVNEHANDEAQLLLVGNKSD-METRVVTADQGEALAKELGIPFIESSA 163 +T+ + + K L+ NK D + D PFIE+ Sbjct: 120 PQTYEAL-ELLKERR------VPFLIAANKIDRIPGWKPNPD----------APFIETIR 162 Query: 164 KNDDNVNEIFFTLAKLIQEKI 184 + D V EI I K+ Sbjct: 163 RQDPKVREILEQRVYEIVGKM 183 >5FG3-A nrPDB Length = 623 Score = 48.7 bits (115), Expect = 2e-06, Method: Composition-based stats. Identities = 40/201 (19%), Positives = 66/201 (32%), Gaps = 41/201 (20%) Query: 7 VSASSGNGKSYDSIMK---ILLIGDSGVGKSCLLVRF---------VEDKFNPSFITTIG 54 ++ G G + ++ ++++G GK+ LL + + + Sbjct: 1 MAGDKG-GGDGERRLRQPIVVVLGHVDHGKTTLLDKIRRTAVAAKEAGGITQHIGASIVP 59 Query: 55 IDFKIKTVDINGK--KVKLQL-----WDTAGQERFRTITTAYYRGAMGIILVYDVT---D 104 D K + K VKL + DT G E F + A ILV D+ Sbjct: 60 ADVIEKIAEPLKKVIPVKLVIPGLLFIDTPGHELFSNLRRRGGSVADFAILVVDIMEGFK 119 Query: 105 ERTFTNIKQWFKTVNEHANDEAQLLLVGNKSD-METRVVTADQGEALAKELGIPFIESSA 163 +T+ + + K L+ NK D + D PFIE+ Sbjct: 120 PQTYEAL-ELLKERR------VPFLIAANKIDRIPGWKPNPD----------APFIETIR 162 Query: 164 KNDDNVNEIFFTLAKLIQEKI 184 + D V EI I K+ Sbjct: 163 RQDPKVREILEQRVYEIVGKM 183 >3V00-C nrPDB Length = 356 Score = 48.7 bits (115), Expect = 2e-06, Method: Composition-based stats. Identities = 28/190 (14%), Positives = 59/190 (31%), Gaps = 53/190 (27%) Query: 47 PSFITTIGIDFKIKTVDING--------KKVKLQLWDTAGQERFRTITTAYYRGAMGIIL 98 P ++ T D V G K + +++D GQ R + G II Sbjct: 167 PGYVPT-EQDVLRSRVKTTGIIETQFSFKDLNFRMFDVGGQRSERKKWIHCFEGVTAIIF 225 Query: 99 VYDVTD-------ERTFTNIKQWFKTVNEHAND----EAQLLLVGNKSDMETRVV----- 142 ++D + + + N N+ + ++L NK D+ + Sbjct: 226 CVALSDYDLVLAEDEEMNRMHESMHLFNSICNNKWFTDTSIILFLNKKDLFEEKIKKSPL 285 Query: 143 -----------TADQGEALAKELGIPFIE--------------SSAKNDDNVNEIFFTLA 177 T ++ + + F+E + A + NV +F + Sbjct: 286 TICYPEYAGSNTYEEAGNY---IKVQFLELNMRRDVKEIYSHMTCATDTQNVKFVFDAVT 342 Query: 178 KLIQEKIDSN 187 +I ++ + Sbjct: 343 DIIIKENLKD 352 Score = 29.8 bits (66), Expect = 0.93, Method: Composition-based stats. Identities = 17/79 (21%), Positives = 30/79 (37%), Gaps = 9/79 (11%) Query: 19 SIMKILLIGDSGVGKSCLLVRFVEDKFNP-------SFITTIGIDFKIKTVDINGKKVKL 71 +K+LL+G GKS ++ + +P FI I + + I L Sbjct: 34 RTVKLLLLGAGESGKSTIVKQMKIIHQDPYSLEECLEFIAIIYGNTLQSILAIVRAMTTL 93 Query: 72 QLW--DTAGQERFRTITTA 88 + D+A Q+ R + Sbjct: 94 NIQYGDSARQDDARKLMHM 112 >3PR1-A nrPDB Length = 195 Score = 48.3 bits (114), Expect = 3e-06, Method: Composition-based stats. Identities = 33/179 (18%), Positives = 70/179 (39%), Gaps = 29/179 (16%) Query: 23 ILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAG---- 78 + +G S VGKS LL K T G K ++++ K D G Sbjct: 26 VAFVGRSNVGKSSLLNALFNRKI-AFVSKTPG---KTRSINFYLVNSKYYFVDLPGYGYA 81 Query: 79 ----QER--FRTITTAYYRGAMGIILVYDVTD-----ERTFTNIKQWFKTVNEHANDEAQ 127 +ER ++ + Y++ + +V+ + D + + + +W K++ Sbjct: 82 KVSKKERMLWKRLVEDYFKNRWSLQMVFLLVDGRIPPQDSDLMMVEWMKSL------NIP 135 Query: 128 LLLVGNKSD---METRVVTADQGEALAKELG-IPFIESSAKNDDNVNEIFFTLAKLIQE 182 +V K D M R ++ + + G I +S+ + ++E+ ++ L++E Sbjct: 136 FTIVLTKMDKVKMSERAKKLEEHRKVFSKYGEYTIIPTSSVTGEGISELLDLISTLLKE 194 >2WJG-A nrPDB Length = 188 Score = 47.9 bits (113), Expect = 3e-06, Method: Composition-based stats. Identities = 36/175 (20%), Positives = 64/175 (36%), Gaps = 10/175 (5%) Query: 14 GKSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQL 73 G S+ +I LIG+ VGKS + + + ++ K + NG+ K ++ Sbjct: 1 GGSHMKSYEIALIGNPNVGKSTIFNALTGENVYIGNWPGVTVEKKEGEFEYNGE--KFKV 58 Query: 74 WDTAG-----QERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQL 128 D G I Y LV ++ D + E + L Sbjct: 59 VDLPGVYSLTANSIDEIIARDYIINEKPDLVVNIVDATALERNLYLTLQLMEMGAN---L 115 Query: 129 LLVGNKSDMETRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEK 183 LL NK D+ + + L K LG+ + SA + E+ ++ +++K Sbjct: 116 LLALNKMDLAKSLGIEIDVDKLEKILGVKVVPLSAAKKMGIEELKKAISIAVKDK 170 >3C5H-A nrPDB Length = 255 Score = 47.9 bits (113), Expect = 3e-06, Method: Composition-based stats. Identities = 23/91 (25%), Positives = 43/91 (47%), Gaps = 5/91 (5%) Query: 94 MGIILVYDVTD--ERTFTNIKQWFKTV-NEHANDEAQLLLVGNKSDMETRVVTADQGEAL 150 G +L DV+ R F + ++ + N+ A + +++V K D E Sbjct: 164 DGFLLGIDVSRGMNRNFDDQLKFVSNLYNQLAKTKKPIVVVLTKCD-EGVERYIRDAHTF 222 Query: 151 A-KELGIPFIESSAKNDDNVNEIFFTLAKLI 180 A + + +E+SA+++ NV+ F TL +LI Sbjct: 223 ALSKKNLQVVETSARSNVNVDLAFSTLVQLI 253 Score = 29.4 bits (65), Expect = 1.1, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 14/70 (20%) Query: 10 SSGNGKSYDS-IMKILLIGDSG---------VGKSCLLVRFVE---DKFNPSFITTI-GI 55 SSG Y I ++G SG +GKSCL RFV D+F+ + + Sbjct: 8 SSGRENLYFQGTYNISVVGLSGTEKEKGQCGIGKSCLCNRFVRPSADEFHLDHTSVLSTS 67 Query: 56 DFKIKTVDIN 65 DF + V+ + Sbjct: 68 DFGGRVVNND 77 >3A1U-A nrPDB Length = 258 Score = 47.5 bits (112), Expect = 5e-06, Method: Composition-based stats. Identities = 36/197 (18%), Positives = 62/197 (31%), Gaps = 25/197 (12%) Query: 19 SIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITT-IGIDFKIKTVDINGKKVKLQLWDTA 77 ++K+ L G VGK+ L K ++ G+ + K K + L D Sbjct: 4 HMVKVALAGCPNVGKTSLFNALTGTK---QYVANWPGVTVEKKEGVFTYKGYTINLIDLP 60 Query: 78 GQERFR------TITTAYYRGAMG--IILVYDVTDERTFTNIKQWFKTVNEHANDEAQLL 129 G I Y +ILV D + + E ++ Sbjct: 61 GTYSLGYSSIDEKIARDYLLKGDADLVILVADSVNP---EQSLYLLLEILEMEKK---VI 114 Query: 130 LVGNKSDMETRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAK-----LIQEKI 184 L D + L K LGIP + +S+ + + E+ + + I ++ Sbjct: 115 LAMTAIDEAKKTGMKIDRYELQKHLGIPVVFTSSVTGEGLEELKEKIVEYAQKNTILHRM 174 Query: 185 --DSNKLVGVGNGKEGN 199 D + V K N Sbjct: 175 ILDYGEKVESEIKKVEN 191 >4ZU9-A nrPDB Length = 582 Score = 47.1 bits (111), Expect = 6e-06, Method: Composition-based stats. Identities = 31/154 (20%), Positives = 59/154 (38%), Gaps = 5/154 (3%) Query: 32 GKSCLLVRFV---EDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQERFRTITTA 88 GK+ L+ D+ + ID +D +L++ D G ERF A Sbjct: 15 GKTTLIKTLTGIDTDRLPEEKKRGLSIDIGFAYIDFPDINTRLEIIDVPGHERFIKNAIA 74 Query: 89 YYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSDMETRVVTADQGE 148 A G+ILV D + I+ + +L +K D E + ++ Sbjct: 75 GICSASGLILVVDPNEGIMPQTIEHLRVAKSFGIKHGIAVLTKMDKVDEELAHIAEEELI 134 Query: 149 AL--AKELGIPFIESSAKNDDNVNEIFFTLAKLI 180 A +E+ + ++ SA + ++ ++ KL+ Sbjct: 135 AFLEKEEMNMEIVKVSAVTGQGIEDLKNSIKKLL 168 >3R9W-A nrPDB Length = 307 Score = 47.1 bits (111), Expect = 6e-06, Method: Composition-based stats. Identities = 35/181 (19%), Positives = 64/181 (35%), Gaps = 32/181 (17%) Query: 23 ILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQL--WDTAGQ- 79 + ++G VGKS LL + G +++ + + + Q+ DT G Sbjct: 12 VAIVGKPNVGKSTLLNNLL-GTKVSIISPKAG-TTRMRVLGVKNIPNEAQIIFLDTPGIY 69 Query: 80 ---------ERFRTITTAYYRGAMGIILVYDVTD--ERTFTNI-KQWFKTVNEHANDEAQ 127 I A I+ + D T+ I + + K +N+ Sbjct: 70 EPKKSDVLGHSMVEIAKQSLEEADVILFMIDATEGWRPRDEEIYQNFIKPLNK------P 123 Query: 128 LLLVGNKSDMETRVVTADQGEALAKELGIPFIE------SSAKNDDNVNEIFFTLAKLIQ 181 +++V NK D ++ A L E+ E SA N++E+ T+ K + Sbjct: 124 VIVVINKID---KIGPAKNVLPLIDEIHKKHPELTEIVPISALKGANLDELVKTILKYLP 180 Query: 182 E 182 E Sbjct: 181 E 181 >2Q3F-A nrPDB Length = 181 Score = 46.7 bits (110), Expect = 7e-06, Method: Composition-based stats. Identities = 40/179 (22%), Positives = 70/179 (39%), Gaps = 25/179 (13%) Query: 22 KILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKK---VKLQLWDTAG 78 +ILL+G GKS + + V K +P+ T+ ++ K + V Q+WD G Sbjct: 6 RILLMGLRRSGKSSI-QKVVFHKMSPN--ETLFLESTNKICREDVSNSSFVNFQIWDFPG 62 Query: 79 QERFRTITTAY---YRGAMGIILVYDVTDERTFTNIKQWFKTVNE--HANDEAQLLLVGN 133 Q F T Y +RG +I V D D + + TV N + + + Sbjct: 63 QIDFFDPTFDYEMIFRGTGALIFVIDSQD-DYMEALARLHLTVTRAYKVNTDINFEVFIH 121 Query: 134 KSD--------METRVVTADQGEALA----KELGIPFIESSAKNDDNVNEIFFTLAKLI 180 K D R + + LA +++ + F +S D ++ E F + + + Sbjct: 122 KVDGLSDDHKIETQRDIHQRANDDLADAGLEKIHLSFYLTS-IYDHSIFEAFSKVVQKL 179 >4KJZ-A nrPDB Length = 473 Score = 46.3 bits (109), Expect = 8e-06, Method: Composition-based stats. Identities = 31/182 (17%), Positives = 57/182 (31%), Gaps = 17/182 (9%) Query: 23 ILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQERF 82 ++++G GK+ LL + + I V V DT G E F Sbjct: 75 VVIMGHVDHGKTTLLDYLRKSRIAEKEAGGITQHVGAFEVKTPQGTVVFI--DTPGHEAF 132 Query: 83 RTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVG-NKSDMETRV 141 TI + A ++V D I + HA L+ NK D+ Sbjct: 133 TTIRQRGAKVADIAVIVIAADD-----GIMPQTEEAIAHAKAAGAKLIFAINKIDLPQAD 187 Query: 142 VTADQGEALAKEL-------GIPFIESSAKNDDNVNEIFFTLAKLIQEKIDSNKLVGVGN 194 + + + + I SAK V ++ + L+ +++ + Sbjct: 188 PEKVKRQLMERGFVPEEYGGDAIVIPISAKTGQGVQDLLEMI--LLLAELEDYRADPNAE 245 Query: 195 GK 196 + Sbjct: 246 PR 247 >4B44-A nrPDB Length = 363 Score = 46.3 bits (109), Expect = 9e-06, Method: Composition-based stats. Identities = 31/182 (17%), Positives = 57/182 (31%), Gaps = 17/182 (9%) Query: 23 ILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQERF 82 ++++G GK+ LL + + I V V DT G E F Sbjct: 76 VVIMGHVDHGKTTLLDYLRKSRIAEKEAGGITQHVGAFEVKTPQGTVVFI--DTPGHEAF 133 Query: 83 RTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVG-NKSDMETRV 141 TI + A ++V D I + HA L+ NK D+ Sbjct: 134 TTIRQRGAKVADIAVIVIAADD-----GIMPQTEEAIAHAKAAGAKLIFAINKIDLPQAD 188 Query: 142 VTADQGEALAKEL-------GIPFIESSAKNDDNVNEIFFTLAKLIQEKIDSNKLVGVGN 194 + + + + I SAK V ++ + L+ +++ + Sbjct: 189 PEKVKRQLMERGFVPEEYGGDAIVIPISAKTGQGVQDLLEMI--LLLAELEDYRADPNAE 246 Query: 195 GK 196 + Sbjct: 247 PR 248 >3LLU-A nrPDB Length = 196 Score = 46.3 bits (109), Expect = 1e-05, Method: Composition-based stats. Identities = 41/179 (22%), Positives = 72/179 (40%), Gaps = 25/179 (13%) Query: 22 KILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKK---VKLQLWDTAG 78 +ILL+G GKS + + V K +P+ T+ ++ K + V Q+WD G Sbjct: 22 RILLMGLRRSGKSSI-QKVVFHKMSPN--ETLFLESTNKIYKDDISNSSFVNFQIWDFPG 78 Query: 79 QERFRTITTAY---YRGAMGIILVYDVTDERTFTNIKQWFKTVNE--HANDEAQLLLVGN 133 Q F T Y +RG +I V D D + + TV++ N + + + Sbjct: 79 QMDFFDPTFDYEMIFRGTGALIYVIDAQD-DYMEALTRLHITVSKAYKVNPDMNFEVFIH 137 Query: 134 KSD--------METRVVTADQGEALA----KELGIPFIESSAKNDDNVNEIFFTLAKLI 180 K D R + + LA ++L + F +S D ++ E F + + + Sbjct: 138 KVDGLSDDHKIETQRDIHQRANDDLADAGLEKLHLSFYLTS-IYDHSIFEAFSKVVQKL 195 >5VAI-A nrPDB Length = 380 Score = 46.0 bits (108), Expect = 1e-05, Method: Composition-based stats. Identities = 21/102 (20%), Positives = 33/102 (32%), Gaps = 15/102 (14%) Query: 52 TIGIDFKIKTVDINGKKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTD------- 104 T GI F+ K ++ V ++D GQ R + II V + Sbjct: 190 TSGI-FETK-FQVDK--VNFHMFDVGGQRDERRKWIQCFNDVTAIIFVVASSSYNMVIRE 245 Query: 105 ---ERTFTNIKQWFKTV-NEHANDEAQLLLVGNKSDMETRVV 142 FK++ N ++L NK D+ V Sbjct: 246 DNQTNRLQEALNLFKSIWNNRWLRTISVILFLNKQDLLAEKV 287 Score = 29.8 bits (66), Expect = 0.92, Method: Composition-based stats. Identities = 7/25 (28%), Positives = 15/25 (60%) Query: 15 KSYDSIMKILLIGDSGVGKSCLLVR 39 + Y + ++LL+G GKS ++ + Sbjct: 35 QVYRATHRLLLLGAGESGKSTIVKQ 59 >3J4J-A nrPDB Length = 569 Score = 46.0 bits (108), Expect = 1e-05, Method: Composition-based stats. Identities = 31/182 (17%), Positives = 57/182 (31%), Gaps = 17/182 (9%) Query: 23 ILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQERF 82 ++++G GK+ LL + + I V V DT G E F Sbjct: 76 VVIMGHVDHGKTTLLDYLRKSRIAEKEAGGITQHVGAFEVKTPQGTVVFI--DTPGHEAF 133 Query: 83 RTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVG-NKSDMETRV 141 TI + A ++V D I + HA L+ NK D+ Sbjct: 134 TTIRQRGAKVADIAVIVIAADD-----GIMPQTEEAIAHAKAAGAKLIFAINKIDLPQAD 188 Query: 142 VTADQGEALAKEL-------GIPFIESSAKNDDNVNEIFFTLAKLIQEKIDSNKLVGVGN 194 + + + + I SAK V ++ + L+ +++ + Sbjct: 189 PEKVKRQLMERGFVPEEYGGDAIVIPISAKTGQGVQDLLEMI--LLLAELEDYRADPNAE 246 Query: 195 GK 196 + Sbjct: 247 PR 248 >3A1W-A nrPDB Length = 168 Score = 45.6 bits (107), Expect = 2e-05, Method: Composition-based stats. Identities = 33/173 (19%), Positives = 59/173 (34%), Gaps = 18/173 (10%) Query: 19 SIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITT-IGIDFKIKTVDINGKKVKLQLWDTA 77 ++K+ L G VGK+ L K ++ G+ + K K + L D Sbjct: 4 HMVKVALAGCPNVGKTSLFNALTGTK---QYVANWPGVTVEKKEGVFTYKGYTINLIDLP 60 Query: 78 G--QERFRTITTAYYR------GAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLL 129 G + +I R A +ILV D + + E ++ Sbjct: 61 GTYSLGYSSIDEKIARDYLLKGDADLVILVADSVNP---EQSLYLLLEILEMEKK---VI 114 Query: 130 LVGNKSDMETRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQE 182 L D + L K LGIP + +S+ + + E+ + + Q+ Sbjct: 115 LAMTAIDEAKKTGMKIDRYELQKHLGIPVVFTSSVTGEGLEELKEKIVEYAQK 167 >4QJ3-A nrPDB Length = 379 Score = 45.2 bits (106), Expect = 2e-05, Method: Composition-based stats. Identities = 19/110 (17%), Positives = 42/110 (38%), Gaps = 18/110 (16%) Query: 46 NPSFITTIGIDFKIKT-----VDI--NGKKVKLQLWDTAGQERFRTITTAYYRGAMGIIL 98 +PS++ T +++ ++ + + V ++ D GQ R + I+ Sbjct: 189 DPSYLPTQQDVLRVRVPTTGIIEYPFDLQSVIFRMVDVGGQRSERRKWIHCFENVTSIMF 248 Query: 99 V-----YD-----VTDERTFTNIKQWFKTVNEHAN-DEAQLLLVGNKSDM 137 + YD +E K F+T+ + + ++L NK D+ Sbjct: 249 LVALSEYDQVLVESDNENRMEESKALFRTIITYPWFQNSSVILFLNKKDL 298 Score = 29.4 bits (65), Expect = 1.1, Method: Composition-based stats. Identities = 7/25 (28%), Positives = 13/25 (52%) Query: 15 KSYDSIMKILLIGDSGVGKSCLLVR 39 + +K+LL+G GKS + + Sbjct: 54 RDARRELKLLLLGTGESGKSTFIKQ 78 >2QAG-A nrPDB Length = 361 Score = 44.8 bits (105), Expect = 3e-05, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 34/69 (49%), Gaps = 9/69 (13%) Query: 19 SIMKILLIGDSGVGKSCLLVR-FVEDKFNPSFIT--------TIGIDFKIKTVDINGKKV 69 ++++G+SG+GKS L+ F+ D + I T+ I+ ++ G K+ Sbjct: 36 FEFTLMVVGESGLGKSTLINSLFLTDLYPERVIPGAAEKIERTVQIEASTVEIEERGVKL 95 Query: 70 KLQLWDTAG 78 +L + DT G Sbjct: 96 RLTVVDTPG 104 >2BCJ-Q nrPDB Length = 353 Score = 44.8 bits (105), Expect = 3e-05, Method: Composition-based stats. Identities = 19/110 (17%), Positives = 42/110 (38%), Gaps = 18/110 (16%) Query: 46 NPSFITTIGIDFKIKT-----VDI--NGKKVKLQLWDTAGQERFRTITTAYYRGAMGIIL 98 +PS++ T +++ ++ + + V ++ D GQ R + I+ Sbjct: 163 DPSYLPTQQDVLRVRVPTTGIIEYPFDLQSVIFRMVDVGGQRSERRKWIHCFENVTSIMF 222 Query: 99 V-----YD-----VTDERTFTNIKQWFKTVNEHAN-DEAQLLLVGNKSDM 137 + YD +E K F+T+ + + ++L NK D+ Sbjct: 223 LVALSEYDQVLVESDNENRMEESKALFRTIITYPWFQNSSVILFLNKKDL 272 Score = 30.6 bits (68), Expect = 0.61, Method: Composition-based stats. Identities = 8/26 (30%), Positives = 14/26 (53%) Query: 14 GKSYDSIMKILLIGDSGVGKSCLLVR 39 G+ +K+LL+G GKS + + Sbjct: 27 GERSRRELKLLLLGTGESGKSTFIKQ 52 >2ODE-A nrPDB Length = 350 Score = 44.8 bits (105), Expect = 3e-05, Method: Composition-based stats. Identities = 28/190 (14%), Positives = 56/190 (29%), Gaps = 53/190 (27%) Query: 48 SFITTIGIDFKIKTVDING--------KKVKLQLWDTAGQERFRTITTAYYRGAMGIILV 99 ++I T D V G K + +++D GQ R + G II Sbjct: 165 NYIPTQQ-DVLRTRVKTTGIVETHFTFKDLYFKMFDVGGQRSERKKWIHCFEGVTAIIFC 223 Query: 100 YDVTD-------ERTFTNIKQWFKTVNEHANDE----AQLLLVGNKSDMETRVV------ 142 ++D + + + K + N++ ++L NK D+ + Sbjct: 224 VALSDYDLVLAEDEEMNRMHESMKLFDSICNNKWFTETSIILFLNKKDLFEEKIKRSPLT 283 Query: 143 ----------TADQGEALAKELGIPF--------------IESSAKNDDNVNEIFFTLAK 178 T ++ A + F + A + NV +F + Sbjct: 284 ICYPEYTGSNTYEEAAAY---IQCQFEDLNRRKDTKEIYTHFTCATDTKNVQFVFDAVTD 340 Query: 179 LIQEKIDSNK 188 +I + Sbjct: 341 VIIKNNLKES 350 Score = 31.3 bits (70), Expect = 0.30, Method: Composition-based stats. Identities = 8/26 (30%), Positives = 15/26 (57%) Query: 14 GKSYDSIMKILLIGDSGVGKSCLLVR 39 G+ +K+LL+G GKS ++ + Sbjct: 26 GEKAAKEVKLLLLGAGESGKSTIVKQ 51 >4V7F-o nrPDB Length = 647 Score = 44.8 bits (105), Expect = 3e-05, Method: Composition-based stats. Identities = 35/190 (18%), Positives = 75/190 (39%), Gaps = 24/190 (12%) Query: 23 ILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDI---NGKKVKLQLWDTAG- 78 +L+ G VGKS L + + F K++ + + K ++ Q DT G Sbjct: 170 LLICGYPNVGKSSFLRCITKS--DVDVQP---YAFTTKSLYVGHFDYKYLRFQAIDTPGI 224 Query: 79 ----QERFRTITTAY-YRGAM---GIILVYDVTDERTF--TNIKQWFKTVNEHANDEAQL 128 E I Y A ++ D++++ F + F ++ +++ + Sbjct: 225 LDRPTEEMNNIEMQSIYAIAHLRSCVLYFMDLSEQCGFTIEAQVKLFHSIKPLFANKSVM 284 Query: 129 LLVGNKSD-METRVVTADQGEALAKELGIPFIE---SSAKNDDNVNEIFFTLAKLIQEKI 184 +++ NK+D + + ++ + L +P +E SS + ++NV E+ + + Sbjct: 285 VVI-NKTDIIRPEDLDEERAQLLESVKEVPGVEIMTSSCQLEENVMEVRNKACEKLLASR 343 Query: 185 DSNKLVGVGN 194 NKL Sbjct: 344 IENKLKSQSR 353 >3FTQ-A nrPDB Length = 274 Score = 44.0 bits (103), Expect = 4e-05, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 34/69 (49%), Gaps = 9/69 (13%) Query: 19 SIMKILLIGDSGVGKSCLLVR-FVEDKFNPSFIT--------TIGIDFKIKTVDINGKKV 69 ++++G+SG+GKS L+ F+ D + I T+ I+ ++ G K+ Sbjct: 4 FEFTLMVVGESGLGKSTLINSLFLTDLYPERIIPGAAEKIERTVQIEASTVEIEERGVKL 63 Query: 70 KLQLWDTAG 78 +L + DT G Sbjct: 64 RLTVVDTPG 72 >3IEU-A nrPDB Length = 301 Score = 44.0 bits (103), Expect = 4e-05, Method: Composition-based stats. Identities = 34/165 (20%), Positives = 61/165 (36%), Gaps = 25/165 (15%) Query: 23 ILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQ--E 80 I ++G VGKS LL + + K + + +I + G + + DT G E Sbjct: 11 IAIVGRPNVGKSTLLNKLLGQKISITSRKAQTTRHRIVGIHTEGAYQAIYV-DTPGLHME 69 Query: 81 RFRTITTA-------YYRGAMGIILVYDVTDERTFTNIKQWFKT----VNEHANDEAQLL 129 R I +I V + T +W +N+ +A ++ Sbjct: 70 EKRAINRLMNKAASSSIGDVELVIFVVEGT---------RWTPDDEMVLNKLREGKAPVI 120 Query: 130 LVGNKSD-METRVVTADQGEALAKELGIP-FIESSAKNDDNVNEI 172 L NK D ++ + + LA ++ + SA+ NV+ I Sbjct: 121 LAVNKVDNVQEKADLLPHLQFLASQMNFLDIVPISAETGLNVDTI 165 >2QTH-A nrPDB Length = 364 Score = 44.0 bits (103), Expect = 5e-05, Method: Composition-based stats. Identities = 38/165 (23%), Positives = 59/165 (35%), Gaps = 21/165 (12%) Query: 25 LIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQER--- 81 ++G + GK+ L T + K I K+ L DT G R Sbjct: 184 IVGYTNSGKTSLFNSLTG--LTQKVDTKLFTTMSPKRYAIPINNRKIMLVDTVGFIRGIP 241 Query: 82 -------FRTITTAYYRGAMGIILVYDVTDERT--FTNIKQWFKTVNEHANDEAQLLLVG 132 F T++ A Y + +ILV D T ++ F+ + E +L+ Sbjct: 242 PQIVDAFFVTLSEAKY--SDALILVIDSTFSENLLIETLQSSFEILREIGVSGKPILVTL 299 Query: 133 NKSDMETRVV--TADQGEALAKELGIPFIE---SSAKNDDNVNEI 172 NK D + D E L+KEL P + SA N+ + Sbjct: 300 NKIDKINGDLYKKLDLVEKLSKELYSPIFDVIPISALKRTNLELL 344 >6CES-C nrPDB Length = 399 Score = 44.0 bits (103), Expect = 5e-05, Method: Composition-based stats. Identities = 40/179 (22%), Positives = 72/179 (40%), Gaps = 25/179 (13%) Query: 22 KILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKK---VKLQLWDTAG 78 +ILL+G GK+ + + V K +P+ T+ ++ K + V Q+WD G Sbjct: 63 RILLMGLRRSGKNSI-QKVVFHKMSPN--ETLFLESTNKIYKDDISNSSFVNFQIWDFPG 119 Query: 79 QERFRTITTAY---YRGAMGIILVYDVTDERTFTNIKQWFKTVNE--HANDEAQLLLVGN 133 Q F T Y +RG +I V D D + + TV++ N + + + Sbjct: 120 QMDFFDPTFDYEMIFRGTGALIYVIDAQD-DYMEALTRLHITVSKAYKVNPDMNFEVFIH 178 Query: 134 KSD--------METRVVTADQGEALA----KELGIPFIESSAKNDDNVNEIFFTLAKLI 180 K D R + + LA ++L + F +S D ++ E F + + + Sbjct: 179 KVDGLSDDHKIETQRDIHQRANDDLADAGLEKLHLSFYLTS-IYDHSIFEAFSKVVQKL 236 >1UDX-A nrPDB Length = 416 Score = 44.0 bits (103), Expect = 5e-05, Method: Composition-based stats. Identities = 36/173 (20%), Positives = 56/173 (32%), Gaps = 29/173 (16%) Query: 25 LIGDSGVGKSCLLVRFV--EDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTA----- 77 L+G GKS LL K P TT+ + + V ++ + L D Sbjct: 162 LVGYPNAGKSSLLAAMTRAHPKIAPYPFTTLSPNLGVVEVS---EEERFTLADIPGIIEG 218 Query: 78 -------GQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHAND--EAQL 128 G E R I ++ V D D ++ K V + Sbjct: 219 ASEGKGLGLEFLRHIAR-----TRVLLYVLDAAD-EPLKTLETLRKEVGAYDPALLRRPS 272 Query: 129 LLVGNKSDMETRVVTADQGEALAKELGIPFIESSAKNDDN---VNEIFFTLAK 178 L+ NK D+ +ALA+E G+ + SA + E L + Sbjct: 273 LVALNKVDLLEEEAVKALADALARE-GLAVLPVSALTGAGLPALKEALHALVR 324 >4CSU-9 nrPDB Length = 390 Score = 44.0 bits (103), Expect = 5e-05, Method: Composition-based stats. Identities = 24/103 (23%), Positives = 42/103 (40%), Gaps = 10/103 (9%) Query: 101 DVTDERTFTNIKQWFKTVNEHANDEA--QLLLVGNKSDMETRVVTADQGEALAKELGI-- 156 D TD N + + +++ D A LV NK D+ +V ++ +A+A+ LG Sbjct: 251 DGTDP--VENARIIISELEKYSQDLATKPRWLVFNKIDLLDKVEAEEKAKAIAEALGWED 308 Query: 157 PFIESSAKNDDNVNEIFFTLAKLIQEKIDSNKLVGVGNGKEGN 199 + SA + V + L + I N +V K+ Sbjct: 309 KYYLISAASGLGVKD----LCWDVMTFIIENPVVQAEEAKQPE 347 >1SHZ-A nrPDB Length = 340 Score = 43.7 bits (102), Expect = 5e-05, Method: Composition-based stats. Identities = 24/163 (14%), Positives = 51/163 (31%), Gaps = 46/163 (28%) Query: 67 KKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVT--------DERTFTNIKQWFKTV 118 K + +++D GQ R + G II ++ D +T + + K Sbjct: 178 KDLHFKMFDVGGQRSERKKWFECFEGVTAIIFCVALSDYDQVLMEDRQT-NRMHESMKLF 236 Query: 119 NEHAND----EAQLLLVGNKSDMETRVV----------------TADQGEALAKELGIPF 158 + N+ + ++L NK D+ + T ++ A + F Sbjct: 237 DSICNNKWFTDTSIILFLNKKDLFEEKIKKSPLTICYPEYAGSNTYEEAAAY---IQCQF 293 Query: 159 --------------IESSAKNDDNVNEIFFTLAKLIQEKIDSN 187 + A + NV +F + +I + + Sbjct: 294 EDLNKRKDTKEIYTHFTCATDTKNVQFVFDAVTDVIIKNNLKD 336 Score = 34.8 bits (79), Expect = 0.027, Method: Composition-based stats. Identities = 17/69 (24%), Positives = 28/69 (40%), Gaps = 8/69 (11%) Query: 14 GKSYDSIMKILLIGDSGVGKSCLLV--RFVEDK-FN----PSFITTIGIDFKIKTVDING 66 G+ +K+LL+G GKS L R + + F+ F TI + + Sbjct: 6 GEKAAREVKLLLLGAGESGKSTFLKQMRIIHGQDFDQRAREEFRPTIYSNVIKGMRVLVD 65 Query: 67 KKVKLQL-W 74 + KL + W Sbjct: 66 AREKLHIPW 74 >1ZO1-I nrPDB Length = 501 Score = 43.7 bits (102), Expect = 6e-05, Method: Composition-based stats. Identities = 34/180 (18%), Positives = 58/180 (32%), Gaps = 17/180 (9%) Query: 32 GKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQERFRTITTAYYR 91 GK+ LL K I V+ + DT G F ++ + Sbjct: 16 GKTSLLEYIRSTKVASGEAGGITQHIGAYHVETENGMITF--LDTPGHAAFTSMRARGAQ 73 Query: 92 GAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSDMETR---VVTADQGE 148 ++LV D + Q + + + +++ NK D V + + Sbjct: 74 ATDIVVLVVAADDG----VMPQTIEAIQHAKAAQVPVVVAVNKIDKPEADPDRVKNELSQ 129 Query: 149 --ALAKELG--IPFIESSAKNDDNVNEIFFTLAKLIQEKIDSNKLVGVGNGKEGNISINS 204 L +E G F+ SAK ++E L I + + +L V G I S Sbjct: 130 YGILPEEWGGESQFVHVSAKAGTGIDE----LLDAILLQAEVLELKAVRKGMASGAVIES 185 >5X4B-A nrPDB Length = 162 Score = 43.7 bits (102), Expect = 7e-05, Method: Composition-based stats. Identities = 22/122 (18%), Positives = 38/122 (31%), Gaps = 13/122 (10%) Query: 23 ILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQE-- 80 + ++G VGKS + R ++ + T G+ L DT G + Sbjct: 5 VAIVGRPNVGKSTIFNRIAGERIS-IVEDTPGVTRDRIYSSAEWLNYDFNLIDTGGIDIG 63 Query: 81 ------RFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNK 134 + R A II + V T + + + ++L NK Sbjct: 64 DEPFLAQIRQQAEIAMDEADVII--FMVNGREGVTAADEEVAKILYR--TKKPVVLAVNK 119 Query: 135 SD 136 D Sbjct: 120 LD 121 >4DCU-A nrPDB Length = 456 Score = 43.3 bits (101), Expect = 7e-05, Method: Composition-based stats. Identities = 22/122 (18%), Positives = 38/122 (31%), Gaps = 13/122 (10%) Query: 23 ILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQE-- 80 + ++G VGKS + R ++ + T G+ L DT G + Sbjct: 26 VAIVGRPNVGKSTIFNRIAGERIS-IVEDTPGVTRDRIYSSAEWLNYDFNLIDTGGIDIG 84 Query: 81 ------RFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNK 134 + R A II + V T + + + ++L NK Sbjct: 85 DEPFLAQIRQQAEIAMDEADVII--FMVNGREGVTAADEEVAKILYR--TKKPVVLAVNK 140 Query: 135 SD 136 D Sbjct: 141 LD 142 Score = 33.2 bits (75), Expect = 0.073, Method: Composition-based stats. Identities = 35/213 (16%), Positives = 80/213 (37%), Gaps = 33/213 (15%) Query: 18 DSIMKILLIGDSGVGKSCLLVRFVEDK--FNPSFITTIGIDFKIKTVDINGKKVKLQLWD 75 + +++ LIG VGKS L+ + ++ + T + N ++ + D Sbjct: 193 EEVIQFCLIGRPNVGKSSLVNAMLGEERVIVSNVAGTTRDAVDT-SFTYNQQE--FVIVD 249 Query: 76 TAG----------QERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHAND- 124 TAG E++ + ++ V V D I + K + +A++ Sbjct: 250 TAGMRKKGKVYETTEKYSVLRALKAIDRSEVVAV--VLDGE--EGIIEQDKRIAGYAHEA 305 Query: 125 -EAQLLLVGNKSD-METRVVTADQGEALAKEL-----GIPFIESSAKNDDNVNEIFFTLA 177 +A +++V NK D ++ T + E ++ P + SA ++ + + Sbjct: 306 GKAVVIVV-NKWDAVDKDESTMKEFEENIRDHFQFLDYAPILFMSALTKKRIHTLMPAII 364 Query: 178 KLIQEKIDSNKLVGVGNGKEGNISINSGSGNSS 210 K N + V ++ +++ + N + Sbjct: 365 -----KASENHSLRVQTNVLNDVIMDAVAMNPT 392 >2WJI-A nrPDB Length = 165 Score = 43.3 bits (101), Expect = 7e-05, Method: Composition-based stats. Identities = 33/157 (21%), Positives = 55/157 (35%), Gaps = 10/157 (6%) Query: 21 MKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAG-- 78 +I LIG+ VGKS + + + ++ K + NG+ K ++ D G Sbjct: 4 YEIALIGNPNVGKSTIFNALTGENVYIGNWPGVTVEKKEGEFEYNGE--KFKVVDLPGVY 61 Query: 79 ---QERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNKS 135 I Y LV ++ D + E + LLL NK Sbjct: 62 SLTANSIDEIIARDYIINEKPDLVVNIVDATALERNLYLTLQLMEMGAN---LLLALNKM 118 Query: 136 DMETRVVTADQGEALAKELGIPFIESSAKNDDNVNEI 172 D+ + + L K LG+ + SA + E+ Sbjct: 119 DLAKSLGIEIDVDKLEKILGVKVVPLSAAKKMGIEEL 155 >6OIJ-A nrPDB Length = 353 Score = 43.3 bits (101), Expect = 9e-05, Method: Composition-based stats. Identities = 16/112 (14%), Positives = 40/112 (35%), Gaps = 18/112 (16%) Query: 49 FITTIGIDFKIKT-----VDI--NGKKVKLQLWDTAGQERFRTITTAYYRGAMGIILV-- 99 ++ T +++ ++ + + + ++ D GQ R + I+ + Sbjct: 166 YLPTQQDVLRVRVPTTGIIEYPFDLENIIFRMVDVGGQRSERRKWIHCFENVTSIMFLVA 225 Query: 100 ---YD-----VTDERTFTNIKQWFKTVNEHAN-DEAQLLLVGNKSDMETRVV 142 YD +E K F+T+ + + ++L NK D+ + Sbjct: 226 LSEYDQVLVESDNENRMEESKALFRTIITYPWFQNSSVILFLNKKDLLEDKI 277 Score = 30.6 bits (68), Expect = 0.51, Method: Composition-based stats. Identities = 8/26 (30%), Positives = 14/26 (53%) Query: 14 GKSYDSIMKILLIGDSGVGKSCLLVR 39 G+ +K+LL+G GKS + + Sbjct: 27 GEKARRELKLLLLGTGESGKSTFIKQ 52 >4V8Y-CP nrPDB Length = 339 Score = 42.9 bits (100), Expect = 1e-04, Method: Composition-based stats. Identities = 41/217 (18%), Positives = 76/217 (35%), Gaps = 47/217 (21%) Query: 23 ILLIGDSGVGKSCLLVRF------------VEDKFNPSFITT--------IGIDFKIKTV 62 ++G GK+ LL + + + ++ + +++ +T Sbjct: 8 CCILGHVDTGKTKLLDKIRQTNVQGGEAGGITQQIGATYFPIDAIKAKTKVMAEYEKQTF 67 Query: 63 DINGKKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDV---TDERTFTNIKQWFKTVN 119 D+ G L + DT G E F + + ILV D+ +++T +IK Sbjct: 68 DVPG----LLVIDTPGHESFSNLRSRGSSLCNIAILVIDIMHGLEQQTIESIKLLR---- 119 Query: 120 EHANDEAQLLLVGNKSDMETRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKL 179 + +A ++ NK D R+ A F +S AK V E F + Sbjct: 120 ---DRKAPFVVALNKID---RLYDWK-----AIPNN-SFRDSFAKQSRAVQEEFQSRYSK 167 Query: 180 IQEKIDSNKLVGVGNGKEGNI----SINSGSGNSSKS 212 IQ ++ L + N+ SI S + + Sbjct: 168 IQLELAEQGLNSELYFQNKNMSKYVSIVPTSAVTGEG 204 >3WBI-A nrPDB Length = 606 Score = 42.9 bits (100), Expect = 1e-04, Method: Composition-based stats. Identities = 41/217 (18%), Positives = 76/217 (35%), Gaps = 47/217 (21%) Query: 23 ILLIGDSGVGKSCLLVRF------------VEDKFNPSFITT--------IGIDFKIKTV 62 ++G GK+ LL + + + ++ + +++ +T Sbjct: 12 CCILGHVDTGKTKLLDKIRQTNVQGGEAGGITQQIGATYFPIDAIKAKTKVMAEYEKQTF 71 Query: 63 DINGKKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDV---TDERTFTNIKQWFKTVN 119 D+ G L + DT G E F + + ILV D+ +++T +IK Sbjct: 72 DVPG----LLVIDTPGHESFSNLRSRGSSLCNIAILVIDIMHGLEQQTIESIKLLR---- 123 Query: 120 EHANDEAQLLLVGNKSDMETRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKL 179 + +A ++ NK D R+ A F +S AK V E F + Sbjct: 124 ---DRKAPFVVALNKID---RLYDWK-----AIPNN-SFRDSFAKQSRAVQEEFQSRYSK 171 Query: 180 IQEKIDSNKLVGVGNGKEGNI----SINSGSGNSSKS 212 IQ ++ L + N+ SI S + + Sbjct: 172 IQLELAEQGLNSELYFQNKNMSKYVSIVPTSAVTGEG 208 >3JCN-b nrPDB Length = 890 Score = 42.9 bits (100), Expect = 1e-04, Method: Composition-based stats. Identities = 34/180 (18%), Positives = 58/180 (32%), Gaps = 17/180 (9%) Query: 32 GKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQERFRTITTAYYR 91 GK+ LL K I V+ + DT G F ++ + Sbjct: 403 GKTSLLDYIRSTKVASGEAGGITQHIGAYHVETENGMITF--LDTPGHAAFTSMRARGAQ 460 Query: 92 GAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSDMETR---VVTADQGE 148 ++LV D + Q + + + +++ NK D V + + Sbjct: 461 ATDIVVLVVAADDG----VMPQTIEAIQHAKAAQVPVVVAVNKIDKPEADPDRVKNELSQ 516 Query: 149 --ALAKELG--IPFIESSAKNDDNVNEIFFTLAKLIQEKIDSNKLVGVGNGKEGNISINS 204 L +E G F+ SAK ++E L I + + +L V G I S Sbjct: 517 YGILPEEWGGESQFVHVSAKAGTGIDE----LLDAILLQAEVLELKAVRKGMASGAVIES 572 >5M04-A nrPDB Length = 360 Score = 42.5 bits (99), Expect = 1e-04, Method: Composition-based stats. Identities = 21/88 (23%), Positives = 39/88 (44%), Gaps = 6/88 (6%) Query: 101 DVTDERTFTNIKQWFKTVNEHANDEA--QLLLVGNKSDMETRVVTADQGEALAKELGI-- 156 D TD N + + +++ D A LV NK D+ +V ++ +A+A+ LG Sbjct: 271 DGTDP--VENARIIISELEKYSQDLATKPRWLVFNKIDLLDKVEAEEKAKAIAEALGWED 328 Query: 157 PFIESSAKNDDNVNEIFFTLAKLIQEKI 184 + SA + V ++ + + I E Sbjct: 329 KYYLISAASGLGVKDLCWDVMTFIIENP 356 >4NCF-A nrPDB Length = 457 Score = 42.5 bits (99), Expect = 1e-04, Method: Composition-based stats. Identities = 41/217 (18%), Positives = 76/217 (35%), Gaps = 47/217 (21%) Query: 23 ILLIGDSGVGKSCLLVRF------------VEDKFNPSFITT--------IGIDFKIKTV 62 ++G GK+ LL + + + ++ + +++ +T Sbjct: 13 CCILGHVDTGKTKLLDKIRQTNVQGGEAGGITQQIGATYFPIDAIKAKTKVMAEYEKQTF 72 Query: 63 DINGKKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDV---TDERTFTNIKQWFKTVN 119 D+ G L + DT G E F + + ILV D+ +++T +IK Sbjct: 73 DVPG----LLVIDTPGHESFSNLRSRGSSLCNIAILVIDIMHGLEQQTIESIKLLR---- 124 Query: 120 EHANDEAQLLLVGNKSDMETRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKL 179 + +A ++ NK D R+ A F +S AK V E F + Sbjct: 125 ---DRKAPFVVALNKID---RLYDWK-----AIPNN-SFRDSFAKQSRAVQEEFQSRYSK 172 Query: 180 IQEKIDSNKLVGVGNGKEGNI----SINSGSGNSSKS 212 IQ ++ L + N+ SI S + + Sbjct: 173 IQLELAEQGLNSELYFQNKNMSKYVSIVPTSAVTGEG 209 >4V8Z-CV nrPDB Length = 586 Score = 42.5 bits (99), Expect = 1e-04, Method: Composition-based stats. Identities = 41/217 (18%), Positives = 76/217 (35%), Gaps = 47/217 (21%) Query: 23 ILLIGDSGVGKSCLLVRF------------VEDKFNPSFITT--------IGIDFKIKTV 62 ++G GK+ LL + + + ++ + +++ +T Sbjct: 8 CCILGHVDTGKTKLLDKIRQTNVQGGEAGGITQQIGATYFPIDAIKAKTKVMAEYEKQTF 67 Query: 63 DINGKKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDV---TDERTFTNIKQWFKTVN 119 D+ G L + DT G E F + + ILV D+ +++T +IK Sbjct: 68 DVPG----LLVIDTPGHESFSNLRSRGSSLCNIAILVIDIMHGLEQQTIESIKLLR---- 119 Query: 120 EHANDEAQLLLVGNKSDMETRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKL 179 + +A ++ NK D R+ A F +S AK V E F + Sbjct: 120 ---DRKAPFVVALNKID---RLYDWK-----AIPNN-SFRDSFAKQSRAVQEEFQSRYSK 167 Query: 180 IQEKIDSNKLVGVGNGKEGNI----SINSGSGNSSKS 212 IQ ++ L + N+ SI S + + Sbjct: 168 IQLELAEQGLNSELYFQNKNMSKYVSIVPTSAVTGEG 204 >3T5D-A nrPDB Length = 274 Score = 42.1 bits (98), Expect = 2e-04, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 37/78 (47%), Gaps = 12/78 (15%) Query: 9 ASSGNGKSYDSIMKILLIGDSGVGKSCLLVR-FVEDKFNPSF-------ITTIGIDFKIK 60 G+G ++++G+SG+GKS L+ F+ D ++P + T+ ++ Sbjct: 1 GPLGSG----FEFTLMVVGESGLGKSTLINSLFLTDLYSPEYPGPSHRIKKTVQVEQSKV 56 Query: 61 TVDINGKKVKLQLWDTAG 78 + G ++ L + DT G Sbjct: 57 LIKEGGVQLLLTIVDTPG 74 >3EC1-A nrPDB Length = 369 Score = 41.7 bits (97), Expect = 2e-04, Method: Composition-based stats. Identities = 21/88 (23%), Positives = 39/88 (44%), Gaps = 10/88 (11%) Query: 98 LVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSDMETRVVTADQ----GEALAKE 153 LV ++ D F + + A D +LLVGNK+D+ R V + +A+E Sbjct: 74 LVVNIVD--IFDFNGSFIPGLPRFAADN-PILLVGNKADLLPRSVKYPKLLRWMRRMAEE 130 Query: 154 LGIPFIE---SSAKNDDNVNEIFFTLAK 178 LG+ ++ SA + ++ + + Sbjct: 131 LGLCPVDVCLVSAAKGIGMAKVMEAINR 158 >6OIK-A nrPDB Length = 354 Score = 41.7 bits (97), Expect = 2e-04, Method: Composition-based stats. Identities = 14/82 (17%), Positives = 30/82 (36%), Gaps = 11/82 (13%) Query: 67 KKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVT-------DERTFTNIKQWFKTVN 119 K + +L+D GQ R + II ++ ++ T + + + Sbjct: 193 KNLHFRLFDVGGQRSERKKWIHCFEDVTAIIFCVALSGYDQVLHEDETTNRMHESLMLFD 252 Query: 120 EHAND----EAQLLLVGNKSDM 137 N+ + ++L NK D+ Sbjct: 253 SICNNKFFIDTSIILFLNKKDL 274 Score = 29.4 bits (65), Expect = 1.1, Method: Composition-based stats. Identities = 9/29 (31%), Positives = 16/29 (55%) Query: 11 SGNGKSYDSIMKILLIGDSGVGKSCLLVR 39 +G S +K+LL+G GKS ++ + Sbjct: 24 KEDGISAAKDVKLLLLGAGESGKSTIVKQ 52 >5KH0-A nrPDB Length = 396 Score = 41.7 bits (97), Expect = 3e-04, Method: Composition-based stats. Identities = 34/201 (16%), Positives = 66/201 (32%), Gaps = 23/201 (11%) Query: 23 ILLIGDSGVGKSCLLVRFVEDK--FNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQE 80 I + G VGKS + + + + T + L DT G + Sbjct: 11 IAITGRRNVGKSSFMNALIGQEVSIVSNVAGTTTDPVFKSMELSPVGPITLI--DTPGLD 68 Query: 81 --------RFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVG 132 R + + YR GI++V D+ F + + E + Sbjct: 69 DVGELGIKRIKKAKKSLYRADCGILIVDDI--PGNFEE-----QIIKLFKELEIPYFIAI 121 Query: 133 NKSDMETRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEKIDSNKLVGV 192 NK D + + E K+ +P ++ SA +I T+ ++ + + L + Sbjct: 122 NKID----TIDHENIEKEYKKYNVPILKVSALKKIGFEKIGKTINSILPKDDEIPYLSDL 177 Query: 193 GNGKEGNISINSGSGNSSKSN 213 +G + I + + K Sbjct: 178 IDGGDLVILVVPIDLGAPKGR 198 >4UJC-AB nrPDB Length = 627 Score = 41.3 bits (96), Expect = 3e-04, Method: Composition-based stats. Identities = 40/243 (16%), Positives = 80/243 (32%), Gaps = 66/243 (27%) Query: 23 ILLIGDSGVGKSCLLVRF----VEDKFNPSFITTIG--------IDFKIKTV-DINGKKV 69 I ++G GK+ +L + V+D IG I+ + K + + + + V Sbjct: 41 ICVLGHVDTGKTKILDKLRHTHVQDGEAGGITQQIGATNVPLEAINEQTKMIKNFDRENV 100 Query: 70 K---LQLWDTAGQERFRTITTAYYRGAMGIILVYDV---TDERTFTNIKQWFKTVNEHAN 123 + + + DT G E F + ILV D+ + +T + +N + Sbjct: 101 RIPGMLIIDTPGHESFSNLRNRGSSLCDIAILVVDIMHGLEPQTIES-------INLLKS 153 Query: 124 DEAQLLLVGNKSD-----------------METRVVTADQGEALAKE----------LGI 156 + ++ NK D + + T D+ E AK Sbjct: 154 KKCPFIVALNKIDRLYDWKKSPDSDVAATLKKQKKNTKDEFEERAKAIIVEFAQQGLNAA 213 Query: 157 PFIE------------SSAKNDDNVNEIFFTLAKLIQEKIDSNKLVGVGNGKEGNISINS 204 F E +SA D + + + L + + + S +L + + + + Sbjct: 214 LFYENKDPRTFVSLVPTSAHTGDGMGSLIYLLV-ELTQTMLSKRLAHCEELRAQVMEVKA 272 Query: 205 GSG 207 G Sbjct: 273 LPG 275 >2QAG-C nrPDB Length = 418 Score = 40.6 bits (94), Expect = 5e-04, Method: Composition-based stats. Identities = 16/68 (23%), Positives = 34/68 (50%), Gaps = 8/68 (11%) Query: 19 SIMKILLIGDSGVGKSCLLVR-FVEDKFNPSF-------ITTIGIDFKIKTVDINGKKVK 70 ++++G+SG+GKS L+ F+ D ++P + T+ ++ + G ++ Sbjct: 30 FEFTLMVVGESGLGKSTLINSLFLTDLYSPEYPGPSHRIKKTVQVEQSKVLIKEGGVQLL 89 Query: 71 LQLWDTAG 78 L + DT G Sbjct: 90 LTIVDTPG 97 >3H2Y-A nrPDB Length = 368 Score = 40.6 bits (94), Expect = 5e-04, Method: Composition-based stats. Identities = 21/86 (24%), Positives = 37/86 (43%), Gaps = 10/86 (11%) Query: 98 LVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSDMETRVVTADQGEAL----AKE 153 LV + D F W ++ + ++LLVGNK+D+ + V D+ + AK+ Sbjct: 72 LVVKIVD--IFDFNGSWLPGLHRFVGNN-KVLLVGNKADLIPKSVKHDKVKHWMRYSAKQ 128 Query: 154 LGIP---FIESSAKNDDNVNEIFFTL 176 LG+ SA + E+ + Sbjct: 129 LGLKPEDVFLISAAKGQGIAELADAI 154 Score = 27.9 bits (61), Expect = 3.3, Method: Composition-based stats. Identities = 14/60 (23%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 23 ILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQ----LWDTAG 78 + ++G + VGKS + R ++ +F+ I T ++ + L L+DT G Sbjct: 163 VYVVGCTNVGKSTFINRMIK-EFSDETENVITTSHFPGT-TLDLIDIPLDEESSLYDTPG 220 >5CYO-A nrPDB Length = 274 Score = 40.2 bits (93), Expect = 7e-04, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 31/69 (44%), Gaps = 9/69 (13%) Query: 19 SIMKILLIGDSGVGKSCLLVRFVEDKFNPSFIT---------TIGIDFKIKTVDINGKKV 69 I+++G SG+GKS L+ + K + + TI I ++ G ++ Sbjct: 3 FEFNIMVVGQSGLGKSTLINTLFKSKISRKSVQPTSEERIPKTIEIKSITHDIEEKGVRM 62 Query: 70 KLQLWDTAG 78 KL + DT G Sbjct: 63 KLTVIDTPG 71 >6D9H-A nrPDB Length = 355 Score = 39.8 bits (92), Expect = 9e-04, Method: Composition-based stats. Identities = 21/115 (18%), Positives = 38/115 (33%), Gaps = 20/115 (17%) Query: 48 SFITTIGIDFKIKTVDING--------KKVKLQLWDTAGQERFRTITTAYYRGAMGIILV 99 +I T D V G K + +++D Q R + G II Sbjct: 167 DYIPTQQ-DVLRTRVKTTGIVETHFTFKDLHFKMFDVGAQRSERKKWIHCFEGVTAIIFC 225 Query: 100 -----YD--VTDERTFTNIKQWFKTVNEHAND----EAQLLLVGNKSDMETRVVT 143 YD + ++ + K + N+ + ++L NK D+ +T Sbjct: 226 VALSAYDLVLAEDEEMNRMHASMKLFDSICNNKWFTDTSIILFLNKKDLFEEKIT 280 Score = 29.4 bits (65), Expect = 1.1, Method: Composition-based stats. Identities = 7/26 (26%), Positives = 15/26 (57%) Query: 14 GKSYDSIMKILLIGDSGVGKSCLLVR 39 G+ +K+LL+G GK+ ++ + Sbjct: 27 GEKAAREVKLLLLGAGESGKNTIVKQ 52 >4WQY-BZ nrPDB Length = 758 Score = 39.8 bits (92), Expect = 0.001, Method: Composition-based stats. Identities = 21/122 (17%), Positives = 37/122 (30%), Gaps = 20/122 (16%) Query: 31 VGKSCLLVRFVE-----DKFNPSFITTIGIDF----KIKTVDING-------KKVKLQLW 74 GK+ R + K +DF + + + I K ++ + Sbjct: 90 AGKTTTTERILYYTGRIHKIGEVHEGAATMDFMEQERERGITITAAVTTCFWKDHRINII 149 Query: 75 DTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNK 134 DT G F R G I+V+D + + W + + + NK Sbjct: 150 DTPGHVDFTIEVERSMRVLDGAIVVFDSSQGVEPQSETVW----RQAEKYKVPRIAFANK 205 Query: 135 SD 136 D Sbjct: 206 MD 207 >4FID-A nrPDB Length = 340 Score = 39.4 bits (91), Expect = 0.001, Method: Composition-based stats. Identities = 23/110 (20%), Positives = 37/110 (33%), Gaps = 20/110 (18%) Query: 47 PSFITTIG--IDFKIKTVDING-----KKVKLQLWDTAGQERFRTITTAYYRGAMGIILV 99 ++ T I + KT I+ K + L D GQ R +++ I V Sbjct: 132 EDYVPTEEDLIHNRTKTTGIHEYDFVVKDIPFHLIDVGGQRSERKKWVSFFSDVDCAIFV 191 Query: 100 -----YDV-------TDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSDM 137 YD+ T T +I + + A L+ NK D+ Sbjct: 192 TSLAEYDMKLYEDGNTSRLT-ESIAVFKDIMTNEFLKGAVKLIFLNKMDL 240 Score = 30.9 bits (69), Expect = 0.38, Method: Composition-based stats. Identities = 8/45 (17%), Positives = 13/45 (28%), Gaps = 3/45 (6%) Query: 23 ILLIGDSGVGKSCLLVR---FVEDKFNPSFITTIGIDFKIKTVDI 64 ++L+G GKS + + F T V Sbjct: 8 VMLLGSGESGKSTIAKQLKILFGGGFPEQERATHKSSICSNVVTC 52 >1ZCB-A nrPDB Length = 362 Score = 39.0 bits (90), Expect = 0.001, Method: Composition-based stats. Identities = 21/155 (13%), Positives = 45/155 (29%), Gaps = 39/155 (25%) Query: 67 KKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVT--------DERTF---TNIKQWF 115 K V ++ D GQ R + I+ + + D +T ++ + Sbjct: 199 KNVPFKMVDVGGQRSERKRWFECFDSVTSILFLVSSSEFDQVLMEDRQTNRLTESLNIFE 258 Query: 116 KTVNEHANDEAQLLLVGNKSDMETRVVTA-----------------DQGEALA------- 151 VN ++L NK+D+ V + Sbjct: 259 TIVNNRVFSNVSIILFLNKTDLLEEKVQVVSIKDYFLEFEGDPHCLRDVQKFLVECFRGK 318 Query: 152 ----KELGIPFIESSAKNDDNVNEIFFTLAKLIQE 182 ++ + ++A N +N+ +F + I Sbjct: 319 RRDQQQRPLYHHFTTAINTENIRLVFRDVKDTILH 353 Score = 35.6 bits (81), Expect = 0.017, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 29/69 (42%), Gaps = 8/69 (11%) Query: 14 GKSYDSIMKILLIGDSGVGKSCLLV--RFVEDK-FN----PSFITTIGIDFKIKTVDING 66 G+ ++KILL+G GKS L R + + F+ F TI + + Sbjct: 27 GERSARLVKILLLGAGESGKSTFLKQMRIIHGQDFDQRAREEFRPTIYSNVIKGMRVLVD 86 Query: 67 KKVKLQL-W 74 + KL + W Sbjct: 87 AREKLHIPW 95 >1ZCA-A nrPDB Length = 359 Score = 39.0 bits (90), Expect = 0.001, Method: Composition-based stats. Identities = 22/159 (13%), Positives = 50/159 (31%), Gaps = 38/159 (23%) Query: 67 KKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVT--------DERT---FTNIKQWF 115 KK+ ++ D GQ R + G I+ + + D RT ++ + Sbjct: 197 KKIPFKMVDVGGQRSQRQKWFQCFDGITSILFMVSSSEYDQVLMEDRRTNRLVESMNIFE 256 Query: 116 KTVNEHANDEAQLLLVGNKSDMETRVVTA-----------------DQGEALA------- 151 VN ++L NK D+ V + + + Sbjct: 257 TIVNNKLFFNVSIILFLNKMDLLVEKVKSVSIKKHFPDFKGDPHRLEDVQRYLVQCFDRK 316 Query: 152 ---KELGIPFIESSAKNDDNVNEIFFTLAKLIQEKIDSN 187 + + ++A + +N+ +F + I ++ + Sbjct: 317 RRNRSKPLFHHFTTAIDTENIRFVFHAVKDTILQENLKD 355 Score = 34.0 bits (77), Expect = 0.049, Method: Composition-based stats. Identities = 18/71 (25%), Positives = 31/71 (43%), Gaps = 8/71 (11%) Query: 12 GNGKSYDSIMKILLIGDSGVGKSCLLV--RFVED-KFNP----SFITTIGIDFKIKTVDI 64 G ++ ++KILL+G GKS L R + +F+ F TI + + + Sbjct: 27 GERRAVRRLVKILLLGAGESGKSTFLKQMRIIHGREFDQKALLEFRDTIFDNILKGSRVL 86 Query: 65 NGKKVKLQL-W 74 + KL + W Sbjct: 87 VDARDKLGIPW 97 >4V89-AW nrPDB Length = 534 Score = 39.0 bits (90), Expect = 0.002, Method: Composition-based stats. Identities = 17/87 (19%), Positives = 26/87 (29%), Gaps = 4/87 (4%) Query: 54 GIDFKIKTVDINGKKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQ 113 GI + + L DT G E F T ++V D + + Sbjct: 67 GISITTSVMQFPYHDCLVNLLDTPGHEDFSEDTYRTLTAVDCCLMVIDAAKG--VEDRTR 124 Query: 114 WFKTVNEHANDEAQLLLVGNKSDMETR 140 V + +L NK D + R Sbjct: 125 KLMEVTR--LRDTPILTFMNKLDRDIR 149 >1TAG-A nrPDB Length = 324 Score = 38.6 bits (89), Expect = 0.002, Method: Composition-based stats. Identities = 29/190 (15%), Positives = 59/190 (31%), Gaps = 53/190 (27%) Query: 47 PSFITTIGIDFKIKTVDING--------KKVKLQLWDTAGQERFRTITTAYYRGAMGIIL 98 P ++ T D V G K + +++D GQ R + G II Sbjct: 135 PGYVPT-EQDVLRSRVKTTGIIETQFSFKDLNFRMFDVGGQRSERKKWIHCFEGVTCIIF 193 Query: 99 V-----YD--VTDERTFTNIKQWFKTVNEHAND----EAQLLLVGNKSDMETRVV----- 142 + YD + ++ + + N N ++L NK D+ + + Sbjct: 194 IAALSAYDMVLVEDDEVNRMHESLHLFNSICNHRYFATTSIVLFLNKKDVFSEKIKKAHL 253 Query: 143 -----------TADQGEALAKELGIPFIE--------------SSAKNDDNVNEIFFTLA 177 T + + + F+E + A + NV +F + Sbjct: 254 SICFPDYNGPNTYEDAGNY---IKVQFLELNMRRDVKEIYSHMTCATDTQNVKFVFDAVT 310 Query: 178 KLIQEKIDSN 187 +I ++ + Sbjct: 311 DIIIKENLKD 320 Score = 29.8 bits (66), Expect = 0.88, Method: Composition-based stats. Identities = 7/21 (33%), Positives = 13/21 (61%) Query: 19 SIMKILLIGDSGVGKSCLLVR 39 +K+LL+G GKS ++ + Sbjct: 2 RTVKLLLLGAGESGKSTIVKQ 22 >3LX8-A nrPDB Length = 272 Score = 38.3 bits (88), Expect = 0.003, Method: Composition-based stats. Identities = 30/167 (17%), Positives = 58/167 (34%), Gaps = 23/167 (13%) Query: 23 ILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQERF 82 I LIG+ GK+ L N G+ + K+ + K L++ D G Sbjct: 6 IALIGNPNSGKTSLFNLITGH--NQRVGNWPGVTVERKSGLVK-KNKDLEIQDLPG---I 59 Query: 83 RTITTAY-----------YRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLV 131 +++ + A I+ V D T+ N+ + + + + Sbjct: 60 YSMSPYSPEEKVARDYLLSQRADSILNVVDATNLER--NLYLTTQLIET----GIPVTIA 113 Query: 132 GNKSDMETRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAK 178 N D+ + L+ LG+P + +SA V+++ A Sbjct: 114 LNMIDVLDGQGKKINVDKLSYHLGVPVVATSALKQTGVDQVVKKAAH 160 >1PUJ-A nrPDB Length = 282 Score = 38.3 bits (88), Expect = 0.003, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 27/60 (45%), Gaps = 4/60 (6%) Query: 19 SIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAG 78 ++ L+IG VGKS L+ R + + GI + V + + L+L DT G Sbjct: 119 RAIRALIIGIPNVGKSTLINRLAKKNIAKTGDR-PGITTSQQWVKVGKE---LELLDTPG 174 >1S0U-A nrPDB Length = 408 Score = 37.9 bits (87), Expect = 0.004, Method: Composition-based stats. Identities = 22/127 (17%), Positives = 44/127 (34%), Gaps = 9/127 (7%) Query: 94 MGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSDM---ETRVVTADQGEAL 150 G ILV + K+ + D+ +++V NK D+ + +Q + Sbjct: 106 DGAILVIAANEPCPQPQTKEHLMALEILGIDK--IIIVQNKIDLVDEKQAEENYEQIKEF 163 Query: 151 AK---ELGIPFIESSAKNDDNVNEIFFTLAKLI-QEKIDSNKLVGVGNGKEGNISINSGS 206 K P I SA ++ N++ + + I K D + + + +I+ Sbjct: 164 VKGTIAENAPIIPISAHHEANIDVLLKAIQDFIPTPKRDPDATPRMYVARSFDINKPGTE 223 Query: 207 GNSSKSN 213 K Sbjct: 224 IKDLKGG 230 >3JB9-B nrPDB Length = 984 Score = 37.5 bits (86), Expect = 0.004, Method: Composition-based stats. Identities = 27/138 (19%), Positives = 50/138 (36%), Gaps = 29/138 (21%) Query: 32 GKSCLLVRFVEDKFNPS---------FITTIGIDFKIKTVDINGKKVKLQLWDTAGQE-R 81 GKS LL V + + T ++ + + + I + L + D G+ Sbjct: 153 GKSALLDLLVYYTHPDTKPPKRRSLRYTDTHYLE-RERVMSIKSTPLTLAVSDMKGKTFA 211 Query: 82 FRTI-TTAY----------YRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLL 130 F+ I T + + G++LV DV + + + + ++L Sbjct: 212 FQCIDTPGHVDFVDEVAAPMAISDGVVLVVDVIEGVMINTT----RIIKHAILHDMPIVL 267 Query: 131 VGNKSD---METRVVTAD 145 V NK D +E R+ D Sbjct: 268 VLNKVDRLILELRLPPND 285 >5GAD-l nrPDB Length = 497 Score = 36.7 bits (84), Expect = 0.008, Method: Composition-based stats. Identities = 26/133 (19%), Positives = 49/133 (36%), Gaps = 35/133 (26%) Query: 23 ILLIGDSGVGKSCLLVRFVE--DKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQ- 79 IL++G +GVGK+ + + ++ S + G F+ V+ +LQ+W GQ Sbjct: 296 ILMVGVNGVGKTTTIGKLARQFEQQGKSVMLAAGDTFRAAAVE------QLQVW---GQR 346 Query: 80 ERFRTITTAYYRGAMGIILVYD-------------VTDER-TFTNIKQWFKTVNEHANDE 125 I GA +++D + D N + + + Sbjct: 347 NNIPVIAQH--TGADSASVIFDAIQAAKARNIDVLIADTAGRLQNKSHLMEELKK----- 399 Query: 126 AQLLLVGNKSDME 138 ++ V K D+E Sbjct: 400 --IVRVMKKLDVE 410 >4R98-A nrPDB Length = 271 Score = 36.3 bits (83), Expect = 0.010, Method: Composition-based stats. Identities = 29/158 (18%), Positives = 51/158 (32%), Gaps = 20/158 (12%) Query: 25 LIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAG------ 78 LIG+ GK+ L + + + ++ K +V L D G Sbjct: 8 LIGNPNSGKTTLFNQLTGSRQRVGNWAGVTVERKEGQFSTTDHQVTL--VDLPGTYSLTT 65 Query: 79 ---QERFR-TITTAYYRGAMGIIL--VYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVG 132 Q I Y +L V D + N+++ + ++ Sbjct: 66 ISSQTSLDEQIACHYILSGDADLLINVVDAS------NLERNLYLTLQLLELGIPCIVAL 119 Query: 133 NKSDMETRVVTADQGEALAKELGIPFIESSAKNDDNVN 170 N D+ + + +AL+ LG P I A + NV Sbjct: 120 NMLDIAEKQNIRIEIDALSARLGCPVIPLVATDTKNVQ 157 >4KV9-A nrPDB Length = 412 Score = 36.3 bits (83), Expect = 0.010, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 10/67 (14%) Query: 19 SIMKILLIGDSGVGKSCLLVRFVEDKF---NPSFITTIGIDFKIKTVDINGKK----VKL 71 + IL +G++G+GKS LL KF + T D K+K V + K+ +KL Sbjct: 40 FVFNILCVGETGIGKSTLLETLFNQKFDFSPSTHDLT---DPKLKAVTYDLKEANVKLKL 96 Query: 72 QLWDTAG 78 + +T G Sbjct: 97 TVVETCG 103 >5IRR-A nrPDB Length = 308 Score = 35.9 bits (82), Expect = 0.012, Method: Composition-based stats. Identities = 18/84 (21%), Positives = 37/84 (44%), Gaps = 20/84 (23%) Query: 21 MKILLIGDSGVGKSCLLVRFVE------DKFNPSFITTIGI----DFKIKTVDINGKKVK 70 +K++++GDSG+GK+ L+ + + S+ T + TV ++ + Sbjct: 27 IKLIVVGDSGLGKTTLIKSLISIPGERLQVHDGSYTPTEQFRRDPESLSSTVSWRDEEDR 86 Query: 71 LQLW-----DTAG----QERFRTI 85 + +W DT G + FR + Sbjct: 87 V-IWVYKIQDTPGYGDELDVFRNL 109 >6CS8-A nrPDB Length = 303 Score = 35.9 bits (82), Expect = 0.012, Method: Composition-based stats. Identities = 26/133 (19%), Positives = 49/133 (36%), Gaps = 35/133 (26%) Query: 23 ILLIGDSGVGKSCLLVRFVE--DKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQ- 79 IL++G +GVGK+ + + ++ S + G F+ V+ +LQ+W GQ Sbjct: 102 ILMVGVNGVGKTTTIGKLARQFEQQGKSVMLAAGDTFRAAAVE------QLQVW---GQR 152 Query: 80 ERFRTITTAYYRGAMGIILVYD-------------VTDER-TFTNIKQWFKTVNEHANDE 125 I GA +++D + D N + + + Sbjct: 153 NNIPVIAQH--TGADSASVIFDAIQAAKARNIDVLIADTAGRLQNKSHLMEELKK----- 205 Query: 126 AQLLLVGNKSDME 138 ++ V K D+E Sbjct: 206 --IVRVMKKLDVE 216 >1HEY-A nrPDB Length = 128 Score = 35.9 bits (82), Expect = 0.013, Method: Composition-based stats. Identities = 29/97 (29%), Positives = 40/97 (41%), Gaps = 7/97 (7%) Query: 18 DSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTA 77 D +K L++G+ G GKS + E FN G+D K + G + W+ Sbjct: 2 DKELKFLVVGNGGTGKSTVRNLLKELGFNNVEDAEDGVDALNK-LQAGGYGFVISDWNMP 60 Query: 78 ---GQERFRTITTAYYRGAMGIILVYDVTDERTFTNI 111 G E +TI GAM + V VT E NI Sbjct: 61 NMDGLELLKTIRA---DGAMSALPVLMVTAEAKKENI 94 >2QAG-B nrPDB Length = 427 Score = 35.2 bits (80), Expect = 0.019, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 2/55 (3%) Query: 21 MKILLIGDSGVGKSCLLVRFVEDKF--NPSFITTIGIDFKIKTVDINGKKVKLQL 73 IL +G++G+GKS L+ KF P+ T G+ + T D+ V+L+L Sbjct: 43 FNILCVGETGLGKSTLMDTLFNTKFEGEPATHTQPGVQLQSNTYDLQESNVRLKL 97 >1SUL-A nrPDB Length = 195 Score = 35.2 bits (80), Expect = 0.021, Method: Composition-based stats. Identities = 22/127 (17%), Positives = 47/127 (37%), Gaps = 20/127 (15%) Query: 23 ILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAG---- 78 I L G S VGKS + + K + G K +T++ +L D G Sbjct: 26 IALAGRSNVGKSSFINSLINRKNLARTSSKPG---KTQTLNFYIINDELHFVDVPGYGFA 82 Query: 79 ------QERFRTITTAYYRGAMGIILVYDVTDER---TFTNIKQWFKTVNEHANDEAQLL 129 +E + + Y + V + D R + +++ ++ + + ++ Sbjct: 83 KVSKSEREAWGRMIETYITTREELKAVVQIVDLRHAPSNDDVQM-YEFLKYYG---IPVI 138 Query: 130 LVGNKSD 136 ++ K+D Sbjct: 139 VIATKAD 145 >4Z54-A nrPDB Length = 287 Score = 34.8 bits (79), Expect = 0.032, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 30/67 (44%), Gaps = 9/67 (13%) Query: 21 MKILLIGDSGVGKSCLLVRFVEDKFN---------PSFITTIGIDFKIKTVDINGKKVKL 71 I+++G SG+GKS L+ + + + T+ I ++ G K+KL Sbjct: 20 FNIMVVGQSGLGKSTLVNTLFKSQVSRKASSWNREEKIPKTVEIKAIGHVIEEGGVKMKL 79 Query: 72 QLWDTAG 78 + DT G Sbjct: 80 TVIDTPG 86 >3W5J-A nrPDB Length = 204 Score = 34.4 bits (78), Expect = 0.040, Method: Composition-based stats. Identities = 23/166 (13%), Positives = 56/166 (33%), Gaps = 12/166 (7%) Query: 22 KILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKL----QLWDTA 77 +I L+G GKS L R I ++ + + V++ ++D Sbjct: 5 RIALLGMPNTGKSTLFNRMTGGAARVGNWPGITVELLSGKILLGADMVEIIDLPGIYDLH 64 Query: 78 GQERFRTITTAYYRGA--MGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNKS 135 G + + +++ + T I++ + + ++++ N S Sbjct: 65 GFSDDEQVVRHFLHDNVPDLALVILNAT------QIERQMSLLLQLKQLNMNIVVLLNMS 118 Query: 136 DMETRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQ 181 D + +++ L IP + S K E + + ++ Sbjct: 119 DEAKQYGITIDSRKMSELLQIPVFQLSGKYGTGYQEALQAVTRALR 164 >3LXX-A nrPDB Length = 239 Score = 34.0 bits (77), Expect = 0.044, Method: Composition-based stats. Identities = 31/143 (21%), Positives = 53/143 (37%), Gaps = 16/143 (11%) Query: 9 ASSGNGKSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKK 68 G + +S ++I+L+G +G GKS + K S I K + + K+ Sbjct: 18 GGPGRQEPRNSQLRIVLVGKTGAGKSATGNSILGRKVFHSGTAAKSITKKCEKRSSSWKE 77 Query: 69 VKLQLWDTAG------------QERFRTITTAYYRGAMGIILVYDVTD--ERTFTNIKQW 114 +L + DT G +E R I G ++LV + E ++ Sbjct: 78 TELVVVDTPGIFDTEVPNAETSKEIIRCILLTS-PGPHALLLVVPLGRYTEEEHKATEKI 136 Query: 115 FKTVNEHANDEAQLLLVGNKSDM 137 K E A +L+ K D+ Sbjct: 137 LKMFGERA-RSFMILIFTRKDDL 158 >5AR1-A nrPDB Length = 303 Score = 34.0 bits (77), Expect = 0.048, Method: Composition-based stats. Identities = 13/70 (18%), Positives = 29/70 (41%), Gaps = 12/70 (17%) Query: 21 MKILLIGDSGVGKSCLLVRFVEDK---------FNPSFITTIGIDFKIKTVDINGKK--- 68 ++++G SG G+S + + T I + + +TV++ + Sbjct: 28 FTVMIVGQSGSGRSTFINTLCGQQVVDTSTTILLPTDTSTEIDLQLREETVELEDDEGVK 87 Query: 69 VKLQLWDTAG 78 ++L + DT G Sbjct: 88 IQLNIIDTPG 97 >6HZK-A nrPDB Length = 333 Score = 34.0 bits (77), Expect = 0.049, Method: Composition-based stats. Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 4/38 (10%) Query: 22 KILLIG---DSGVGKSCLLVRFVEDKFNPSFITTIGID 56 +++LIG DSG GKS L R D F +T I +D Sbjct: 6 RVVLIGVAGDSGCGKSTFLNRLA-DLFGTELMTVICLD 42 >5H7J-A nrPDB Length = 743 Score = 34.0 bits (77), Expect = 0.051, Method: Composition-based stats. Identities = 24/123 (19%), Positives = 36/123 (29%), Gaps = 22/123 (17%) Query: 32 GKSCLLVRFVEDK---------------FNPSFIT---TIGIDFKIKTVDINGKKVKLQL 73 GK+ L + F+ TI + GK + L Sbjct: 36 GKTTLSDNLLAGAGMISEELAGKQLVLDFDEQEQARGITINAANVSMVHNYEGKDYLINL 95 Query: 74 WDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGN 133 DT G F T R G+I+V D + + + E+ +L N Sbjct: 96 IDTPGHVDFGGDVTRAMRAIDGVIIVVDAVEGVMPQTETVVRQALREYVKP----VLFIN 151 Query: 134 KSD 136 K D Sbjct: 152 KVD 154 >1NI3-A nrPDB Length = 392 Score = 33.6 bits (76), Expect = 0.056, Method: Composition-based stats. Identities = 18/85 (21%), Positives = 33/85 (38%), Gaps = 14/85 (16%) Query: 21 MKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQE 80 +K ++G VGKS F + +G I+ ++ K+ + D E Sbjct: 21 LKTGIVGMPNVGKSTF--------FRAITKSVLGNPANYPYATIDPEEAKVAVPD----E 68 Query: 81 RFRTITTAYYRGAM--GIILVYDVT 103 RF + AY + + V+D+ Sbjct: 69 RFDWLCEAYKPKSRVPAFLTVFDIA 93 >4AC9-A nrPDB Length = 482 Score = 33.6 bits (76), Expect = 0.057, Method: Composition-based stats. Identities = 28/156 (17%), Positives = 50/156 (32%), Gaps = 22/156 (14%) Query: 32 GKSCLLVRFV-------EDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAG-QERFR 83 GK+ L DK S I ID + + ++ L D G + R Sbjct: 31 GKTTLSKVLTEIASTSAHDKLPESQKRGITIDIGFSAFKL--ENYRITLVDAPGHADLIR 88 Query: 84 TITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSD------- 136 + +A ++V D + + +H +++V KSD Sbjct: 89 AVVSA-ADIIDLALIVVDA--KEGPKTQTGEHMLILDHF--NIPIIVVITKSDNAGTEEI 143 Query: 137 METRVVTADQGEALAKELGIPFIESSAKNDDNVNEI 172 T ++ ++ I SAK V+E+ Sbjct: 144 KRTEMIMKSILQSTHNLKNSSIIPISAKTGFGVDEL 179 >5H7K-A nrPDB Length = 397 Score = 33.6 bits (76), Expect = 0.058, Method: Composition-based stats. Identities = 24/123 (19%), Positives = 36/123 (29%), Gaps = 22/123 (17%) Query: 32 GKSCLLVRFVEDK---------------FNPSFIT---TIGIDFKIKTVDINGKKVKLQL 73 GK+ L + F+ TI + GK + L Sbjct: 36 GKTTLSDNLLAGAGMISEELAGKQLVLDFDEQEQARGITINAANVSMVHNYEGKDYLINL 95 Query: 74 WDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGN 133 DT G F T R G+I+V D + + + E+ +L N Sbjct: 96 IDTPGHVDFGGDVTRAMRAIDGVIIVVDAVEGVMPQTETVVRQALREYVKP----VLFIN 151 Query: 134 KSD 136 K D Sbjct: 152 KVD 154 >1YE8-A nrPDB Length = 178 Score = 33.6 bits (76), Expect = 0.062, Method: Composition-based stats. Identities = 11/22 (50%), Positives = 17/22 (77%) Query: 21 MKILLIGDSGVGKSCLLVRFVE 42 MKI++ G+ GVGK+ L+ + VE Sbjct: 1 MKIIITGEPGVGKTTLVKKIVE 22 >3TR5-A nrPDB Length = 528 Score = 33.6 bits (76), Expect = 0.065, Method: Composition-based stats. Identities = 25/124 (20%), Positives = 37/124 (29%), Gaps = 9/124 (7%) Query: 22 KILLIG----DSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTA 77 K+LL G +G KS R + GI + K + L DT Sbjct: 32 KLLLFGGAIQLAGTIKSRKAARHATSDWMELEKQR-GISVTTSVMQFPYKDYLINLLDTP 90 Query: 78 GQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSDM 137 G F T ++V D + K + ++ NK D Sbjct: 91 GHADFTEDTYRTLTAVDSALMVIDAAKGVE----PRTIKLMEVCRLRHTPIMTFINKMDR 146 Query: 138 ETRV 141 +TR Sbjct: 147 DTRP 150 >6G12-A nrPDB Length = 301 Score = 33.6 bits (76), Expect = 0.069, Method: Composition-based stats. Identities = 13/60 (21%), Positives = 27/60 (45%), Gaps = 4/60 (6%) Query: 19 SIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAG 78 ++ +++G VGKS L+ + + + G+ + + + + LQL DT G Sbjct: 126 RAIRAMIVGIPNVGKSTLINKLAKRSIAQTGNK-PGVTKQQQWIKVGNA---LQLLDTPG 181 >2XTZ-A nrPDB Length = 354 Score = 33.2 bits (75), Expect = 0.073, Method: Composition-based stats. Identities = 20/121 (16%), Positives = 41/121 (33%), Gaps = 28/121 (23%) Query: 48 SFITTIGIDFKIKT-----VDINGKKV--------KLQLWDTAGQERFRTITTAYYRGAM 94 ++I T + V+I V +L+D GQ R + G Sbjct: 149 NYIPTKEDVLYARVRTTGVVEIQFSPVGENKKSGEVYRLFDVGGQRNERRKWIHLFEGVT 208 Query: 95 GIILVYDVT--DERTFTNIKQ-----------WFKTVNEHANDEAQLLLVGNKSDMETRV 141 +I ++ D+ F + ++ W + + ++ +L NK D+ + Sbjct: 209 AVIFCAAISEYDQTLFEDEQKNRMMETKELFDWV--LKQPCFEKTSFMLFLNKFDIFEKK 266 Query: 142 V 142 V Sbjct: 267 V 267 Score = 31.7 bits (71), Expect = 0.24, Method: Composition-based stats. Identities = 13/54 (24%), Positives = 22/54 (40%), Gaps = 7/54 (12%) Query: 12 GNGKSYDSIMKILLIGDSGVGKSCLLVR---FVEDKFNP----SFITTIGIDFK 58 G S I K+LL+G GKS + + + F+ S++ I + Sbjct: 1 GAMGSGIHIRKLLLLGAGESGKSTIFKQIKLLFQTGFDEGELKSYVPVIHANVY 54 >2OHF-A nrPDB Length = 396 Score = 33.2 bits (75), Expect = 0.075, Method: Composition-based stats. Identities = 14/74 (18%), Positives = 23/74 (31%), Gaps = 15/74 (20%) Query: 21 MKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVK---------- 70 +KI ++G VGKS + + ID V + ++ Sbjct: 23 LKIGIVGLPNVGKSTFFNVLTNSQASAENFPFCTIDPNESRVPVPDERFDFLCQYHKPAS 82 Query: 71 -----LQLWDTAGQ 79 L + D AG Sbjct: 83 KIPAFLNVVDIAGL 96 >5EE0-A nrPDB Length = 395 Score = 33.2 bits (75), Expect = 0.088, Method: Composition-based stats. Identities = 15/73 (20%), Positives = 22/73 (30%), Gaps = 13/73 (17%) Query: 17 YDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDT 76 + S +KI ++G VGKS + ID V + Sbjct: 22 FSSHLKIGIVGLPNVGKSTFFNIVTKLSIPAENFPFCTIDPNEARVYVPD---------- 71 Query: 77 AGQERFRTITTAY 89 ERF + Y Sbjct: 72 ---ERFDWLCQLY 81 >3CNO-A nrPDB Length = 262 Score = 33.2 bits (75), Expect = 0.090, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 30/63 (47%), Gaps = 4/63 (6%) Query: 16 SYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWD 75 S+D + ++L++G GKS ++ + + K S GI I+ + +++ D Sbjct: 95 SFDRLARVLIVGVPNTGKSTIINKL-KGKRASSVGAQPGITKGIQWFSLENG---VKILD 150 Query: 76 TAG 78 T G Sbjct: 151 TPG 153 >2YV5-A nrPDB Length = 302 Score = 32.9 bits (74), Expect = 0.095, Method: Composition-based stats. Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 4/49 (8%) Query: 7 VSASSGNG----KSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFIT 51 VSA +G G Y +L G SGVGKS +L R ++ ++ Sbjct: 148 VSAKTGEGIDELVDYLEGFICILAGPSGVGKSSILSRLTGEELRTQEVS 196 Score = 28.6 bits (63), Expect = 1.9, Method: Composition-based stats. Identities = 11/67 (16%), Positives = 29/67 (43%), Gaps = 2/67 (2%) Query: 117 TVNEHANDEAQLLLVGNKSDMETRVVTADQGE--ALAKELGIPFIESSAKNDDNVNEIFF 174 + + + + ++V NK D+ + ++ ++ G ++ SAK + ++E+ Sbjct: 102 MLVVYEYFKVEPVIVFNKIDLLNEEEKKELERWISIYRDAGYDVLKVSAKTGEGIDELVD 161 Query: 175 TLAKLIQ 181 L I Sbjct: 162 YLEGFIC 168 >3TK1-A nrPDB Length = 330 Score = 32.9 bits (74), Expect = 0.097, Method: Composition-based stats. Identities = 20/81 (24%), Positives = 33/81 (40%), Gaps = 10/81 (12%) Query: 129 LLVGNKSDMETRVVTADQGEALAKELGIPF-IES---------SAKNDDNVNEIFFTLAK 178 ++V NK+D E V LA + + + E+ SA V E++ T+ K Sbjct: 198 IVVVNKADGEHAVEARKAARELAGAMRLIYPRETLWRPPVLTMSALEGTGVAELWETVLK 257 Query: 179 LIQEKIDSNKLVGVGNGKEGN 199 Q ID+ + +E N Sbjct: 258 HRQVLIDAGEFEKRRRDQEVN 278 >5NON-A nrPDB Length = 165 Score = 32.5 bits (73), Expect = 0.13, Method: Composition-based stats. Identities = 11/29 (37%), Positives = 17/29 (58%), Gaps = 1/29 (3%) Query: 22 KILLIGDSGVGKSCLLVRFVEDKFNPSFI 50 K+ +IGD GVG + L + FV +F + Sbjct: 51 KLEIIGDGGVG-TILDMTFVPGEFPHEYK 78 >2VNE-A nrPDB Length = 201 Score = 32.5 bits (73), Expect = 0.13, Method: Composition-based stats. Identities = 11/29 (37%), Positives = 17/29 (58%), Gaps = 1/29 (3%) Query: 22 KILLIGDSGVGKSCLLVRFVEDKFNPSFI 50 K+ +IGD GVG + L + FV +F + Sbjct: 67 KLEIIGDGGVG-TILDMTFVPGEFPHEYK 94 >3ZJC-A nrPDB Length = 305 Score = 32.5 bits (73), Expect = 0.13, Method: Composition-based stats. Identities = 19/98 (19%), Positives = 35/98 (35%), Gaps = 11/98 (11%) Query: 13 NGKSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQ 72 +S D ++I+L+G +G GKS + ++ S I + + + L Sbjct: 6 MAESEDRSLRIVLVGKTGSGKSATANTILGEEIFDSRIAAQAVTKNCQKASREWQGRDLL 65 Query: 73 LWDTAGQ-----------ERFRTITTAYYRGAMGIILV 99 + DT G + + G I+LV Sbjct: 66 VVDTPGLFDTKESLDTTCKEISRCIISSCPGPHAIVLV 103 >2OUK-A nrPDB Length = 263 Score = 32.5 bits (73), Expect = 0.14, Method: Composition-based stats. Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 1/45 (2%) Query: 23 ILLIGDSGVGKSCLLVRF-VEDKFNPSFITTIGIDFKIKTVDING 66 +++IG SG GKS L + + F+ I GI+ K K ++N Sbjct: 53 VVVIGPSGSGKSTFLRCLNLLEDFDEGEIIIDGINLKAKDTNLNK 97 >6O81-S nrPDB Length = 472 Score = 32.5 bits (73), Expect = 0.15, Method: Composition-based stats. Identities = 14/59 (23%), Positives = 24/59 (40%), Gaps = 6/59 (10%) Query: 128 LLLVGNKSDMETRVVTADQGEAL------AKELGIPFIESSAKNDDNVNEIFFTLAKLI 180 +L++ NK D+ +Q E + G P I SA+ N+ + + K I Sbjct: 185 ILILQNKIDLVKESQAKEQYEQILAFVQGTVAEGAPIIPISAQLKYNIEVVCEYIVKKI 243 >6FEC-S nrPDB Length = 422 Score = 32.5 bits (73), Expect = 0.15, Method: Composition-based stats. Identities = 14/59 (23%), Positives = 24/59 (40%), Gaps = 6/59 (10%) Query: 128 LLLVGNKSDMETRVVTADQGEAL------AKELGIPFIESSAKNDDNVNEIFFTLAKLI 180 +L++ NK D+ +Q E + G P I SA+ N+ + + K I Sbjct: 147 ILILQNKIDLVKESQAKEQYEQILAFVQGTVAEGAPIIPISAQLKYNIEVVCEYIVKKI 205 >5B3F-A nrPDB Length = 343 Score = 32.1 bits (72), Expect = 0.18, Method: Composition-based stats. Identities = 12/32 (37%), Positives = 18/32 (56%), Gaps = 1/32 (3%) Query: 25 LIGDSGVGKSCLLVRFVEDKFNPSFITTIGID 56 + GDSG GKS R + D F +++I +D Sbjct: 42 VAGDSGSGKSTFT-RAISDIFGEELVSSITVD 72 >3PEN-A nrPDB Length = 403 Score = 32.1 bits (72), Expect = 0.20, Method: Composition-based stats. Identities = 16/97 (16%), Positives = 40/97 (41%), Gaps = 15/97 (15%) Query: 128 LLLVGNKSDMETRVVTADQGEALAKEL----------GIPFIESSAKNDDNVNEIFFTLA 177 L++V NK D VV+ ++ + +++ +P I SA + N++ + + Sbjct: 132 LIIVQNKVD----VVSKEEALSQYRQIKQFTKGTWAENVPIIPVSALHKINIDSLIEGIE 187 Query: 178 KLIQEK-IDSNKLVGVGNGKEGNISINSGSGNSSKSN 213 + I+ D ++ + + +++ N K Sbjct: 188 EYIKTPYRDLSQKPVMLVIRSFDVNKPGTQFNELKGG 224 >4U00-A nrPDB Length = 244 Score = 31.7 bits (71), Expect = 0.22, Method: Composition-based stats. Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 15/51 (29%) Query: 22 KILLIGDSGVGKSCLLVRFVEDKFNPSFITTIG--IDFKIKTVDINGKKVK 70 K+++IG SG GKS L+ TI DF+ V ++G VK Sbjct: 32 KLVIIGPSGSGKSTLIR-------------TINRLEDFQEGEVVVDGLSVK 69 >1U0L-A nrPDB Length = 301 Score = 31.7 bits (71), Expect = 0.23, Method: Composition-based stats. Identities = 22/98 (22%), Positives = 37/98 (37%), Gaps = 5/98 (5%) Query: 85 ITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSDMETRVVTA 144 +T + +ILV V T T I F + E E +++ NK D+ Sbjct: 77 LTKPHVANVDQVILVVTVKMPETSTYIIDKFLVLAEKNELETVMVI--NKMDL-YDEDDL 133 Query: 145 DQGEALAKELG--IPFIESSAKNDDNVNEIFFTLAKLI 180 + L + P +++SAK + E+ L I Sbjct: 134 RKVRELEEIYSGLYPIVKTSAKTGMGIEELKEYLKGKI 171 Score = 27.5 bits (60), Expect = 4.9, Method: Composition-based stats. Identities = 15/35 (42%), Positives = 17/35 (48%), Gaps = 4/35 (11%) Query: 8 SASSGNGKSYDSIM---KI-LLIGDSGVGKSCLLV 38 SA +G G KI + G SGVGKS LL Sbjct: 153 SAKTGMGIEELKEYLKGKISTMAGLSGVGKSSLLN 187 >4TLD-A nrPDB Length = 253 Score = 31.7 bits (71), Expect = 0.24, Method: Composition-based stats. Identities = 13/54 (24%), Positives = 22/54 (40%), Gaps = 1/54 (1%) Query: 24 LLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTA 77 L+ G SG GK+ ++F+ + + + F+ DI WD A Sbjct: 43 LVSGTSGTGKTLFSIQFLYNGIIEFDEPGVFVTFEETPQDIIKNARSFG-WDLA 95 >2IYT-A nrPDB Length = 184 Score = 31.7 bits (71), Expect = 0.26, Method: Composition-based stats. Identities = 16/66 (24%), Positives = 28/66 (42%), Gaps = 11/66 (16%) Query: 22 KILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVK--LQLWDTAGQ 79 K +L+G G GKS + R + +G+ V I + + ++ T G+ Sbjct: 4 KAVLVGLPGSGKSTIGRRLAKA---------LGVGLLDTDVAIEQRTGRSIADIFATDGE 54 Query: 80 ERFRTI 85 + FR I Sbjct: 55 QEFRRI 60 >6F1T-i nrPDB Length = 492 Score = 31.3 bits (70), Expect = 0.28, Method: Composition-based stats. Identities = 20/108 (18%), Positives = 42/108 (38%), Gaps = 14/108 (12%) Query: 23 ILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTV--DINGKKVKLQLW----DT 76 IL+ G+ G GK+ L+ + + G+++ +V + + +W D Sbjct: 57 ILVFGEDGSGKTTLMTKLQGAEHGKKGR---GLEYLYLSVHDEDRDDHTRCNVWILDGDL 113 Query: 77 --AGQERFRTITTAYYRGAMGIILVYDVTDERT-FTNIKQWFKTVNEH 121 G +F +I V D++ T ++++W + EH Sbjct: 114 YHKGLLKFAVSAE-SLPET-LVIFVADMSRPWTVMESLQKWASVLREH 159 Score = 31.3 bits (70), Expect = 0.32, Method: Composition-based stats. Identities = 11/70 (15%), Positives = 23/70 (32%), Gaps = 20/70 (28%) Query: 126 AQLLLVGNKSDMETRVVTADQGEA----------------LAKELGIPFIESSAKNDDNV 169 +L+V K D V+ + E + G I +S K + N+ Sbjct: 225 IPVLVVCTKCD----AVSVLEKEHDYRDEHLDFIQSHLRRFCLQYGAALIYTSVKEEKNL 280 Query: 170 NEIFFTLAKL 179 + ++ + Sbjct: 281 DLLYKYIVHK 290 >4YMS-J nrPDB Length = 240 Score = 31.3 bits (70), Expect = 0.28, Method: Composition-based stats. Identities = 19/50 (38%), Positives = 23/50 (46%), Gaps = 6/50 (12%) Query: 23 ILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQ 72 +++IG SG GKS LL N T G F I V IN KV + Sbjct: 30 VVIIGPSGSGKSTLLRC-----INLLEEPTKGEVF-IDGVKINNGKVNIN 73 >3S1A-A nrPDB Length = 525 Score = 31.3 bits (70), Expect = 0.28, Method: Composition-based stats. Identities = 13/54 (24%), Positives = 22/54 (40%), Gaps = 1/54 (1%) Query: 24 LLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTA 77 L+ G SG GK+ ++F+ + + + F+ DI WD A Sbjct: 43 LVSGTSGTGKTLFSIQFLYNGIIEFDEPGVFVTFEETPQDIIKNARSFG-WDLA 95 >2WIC-A nrPDB Length = 267 Score = 31.3 bits (70), Expect = 0.28, Method: Composition-based stats. Identities = 27/147 (18%), Positives = 47/147 (31%), Gaps = 20/147 (13%) Query: 25 LIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAG------ 78 LIG+ GK+ L + + + ++ K +V L D G Sbjct: 8 LIGNPNSGKTTLFNQLTGARQRVGNWAGVTVERKEGIFATTDHQVTL--VDLPGTYSLTT 65 Query: 79 ---QERFRTITTAYYR---GAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVG 132 Q +Y A +I V D + N+++ + ++ Sbjct: 66 ISSQTSLDEQIACHYILSGDADMLINVVDAS------NLERNLYLTLQLLELGIPCVVAL 119 Query: 133 NKSDMETRVVTADQGEALAKELGIPFI 159 N D+ + +ALA LG P I Sbjct: 120 NMLDIAEKQQVRIDIDALAARLGCPVI 146 >6F1Y-j nrPDB Length = 337 Score = 31.3 bits (70), Expect = 0.29, Method: Composition-based stats. Identities = 20/108 (18%), Positives = 42/108 (38%), Gaps = 14/108 (12%) Query: 23 ILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTV--DINGKKVKLQLW----DT 76 IL+ G+ G GK+ L+ + + G+++ +V + + +W D Sbjct: 21 ILVFGEDGSGKTTLMTKLQGAEHGKKGR---GLEYLYLSVHDEDRDDHTRCNVWILDGDL 77 Query: 77 --AGQERFRTITTAYYRGAMGIILVYDVTDERT-FTNIKQWFKTVNEH 121 G +F +I V D++ T ++++W + EH Sbjct: 78 YHKGLLKFAVSAE-SLPET-LVIFVADMSRPWTVMESLQKWASVLREH 123 Score = 31.3 bits (70), Expect = 0.33, Method: Composition-based stats. Identities = 11/70 (15%), Positives = 23/70 (32%), Gaps = 20/70 (28%) Query: 126 AQLLLVGNKSDMETRVVTADQGEA----------------LAKELGIPFIESSAKNDDNV 169 +L+V K D V+ + E + G I +S K + N+ Sbjct: 189 IPVLVVCTKCD----AVSVLEKEHDYRDEHLDFIQSHLRRFCLQYGAALIYTSVKEEKNL 244 Query: 170 NEIFFTLAKL 179 + ++ + Sbjct: 245 DLLYKYIVHK 254 >3DEF-A nrPDB Length = 262 Score = 31.3 bits (70), Expect = 0.29, Method: Composition-based stats. Identities = 12/59 (20%), Positives = 22/59 (37%), Gaps = 1/59 (1%) Query: 21 MKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQ 79 M +L++G GVGKS + + ++ + V + + DT G Sbjct: 37 MTVLVLGKGGVGKSSTVNSLIGEQVV-RVSPFQAEGLRPVMVSRTMGGFTINIIDTPGL 94 >2P5T-B nrPDB Length = 253 Score = 31.3 bits (70), Expect = 0.31, Method: Composition-based stats. Identities = 16/57 (28%), Positives = 26/57 (45%), Gaps = 2/57 (3%) Query: 5 RTVSASSGNGKSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKT 61 S + G KS + ILL G SG GK+ + R + +F + + G F+ + Sbjct: 18 NLRSLTRGK-KSSKQPIAILLGGQSGAGKTTI-HRIKQKEFQGNIVIIDGDSFRSQH 72 >2DHR-A nrPDB Length = 499 Score = 31.3 bits (70), Expect = 0.33, Method: Composition-based stats. Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 2/55 (3%) Query: 23 ILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTA 77 +LL+G GVGK+ L + P FIT G DF V + +V+ L++TA Sbjct: 67 VLLVGPPGVGKTHLARAVAGEARVP-FITASGSDFVEMFVGVGAARVR-DLFETA 119 >1IY1-A nrPDB Length = 254 Score = 31.3 bits (70), Expect = 0.33, Method: Composition-based stats. Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 2/55 (3%) Query: 23 ILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTA 77 +LL+G GVGK+ L + P FIT G DF V + +V+ L++TA Sbjct: 52 VLLVGPPGVGKTHLARAVAGEARVP-FITASGSDFVEMFVGVGAARVR-DLFETA 104 >4Z8X-A nrPDB Length = 497 Score = 31.3 bits (70), Expect = 0.33, Method: Composition-based stats. Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 2/55 (3%) Query: 23 ILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTA 77 +LL G+ GVGK+ L + P FI+ G DF V + +V+ L++TA Sbjct: 54 VLLYGEPGVGKTLLAKAIAGEAHVP-FISVSGSDFVEMFVGVGAARVR-DLFETA 106 >2I3B-A nrPDB Length = 189 Score = 31.3 bits (70), Expect = 0.33, Method: Composition-based stats. Identities = 11/51 (21%), Positives = 22/51 (43%), Gaps = 3/51 (5%) Query: 23 ILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQL 73 + L G GVGK+ L+ + + S + F + V G+++ + Sbjct: 4 VFLTGPPGVGKTTLIHK-ASEVLKSSGVPV--DGFYTEEVRQGGRRIGFDV 51 >5IDV-A nrPDB Length = 279 Score = 31.3 bits (70), Expect = 0.34, Method: Composition-based stats. Identities = 8/19 (42%), Positives = 12/19 (63%) Query: 23 ILLIGDSGVGKSCLLVRFV 41 + L+G SG GK+ L+ V Sbjct: 68 VALVGRSGAGKTSLVNMLV 86 >4ZKD-A nrPDB Length = 499 Score = 31.3 bits (70), Expect = 0.35, Method: Composition-based stats. Identities = 34/208 (16%), Positives = 66/208 (31%), Gaps = 60/208 (28%) Query: 23 ILLIGDSGVGKSCLLVRFVED-------------KFNPSFITTIGIDFKI---------- 59 L +GD+ GKS LL + D K + + + FK+ Sbjct: 22 CLFLGDTNAGKSTLLGHLLYDLNEISMSSMRELQKKSSNLDPSSSNSFKVILDNTKTERE 81 Query: 60 -------KTVDINGKKV----KLQLWDTAGQERF---RTITTAYYRGAMGIILVYDVT-- 103 K + + + L L DT G ++ T+ + +LV D Sbjct: 82 NGFSMFKKVIQVENDLLPPSSTLTLIDTPGSIKYFNKETLNSILTFDPEVYVLVIDCNYD 141 Query: 104 ---------DERTFTNIKQWFKTVNEHANDEAQLLLVGNKSDM------ETRVVTADQGE 148 + + + +K A + ++L+ NK+D+ ++ ++ Sbjct: 142 SWEKSLDGPNNQIYEILKVISYLNKNSACKKHLIILL-NKADLISWDKHRLEMIQSELNY 200 Query: 149 ALAKEL-----GIPFIESSAKNDDNVNE 171 L + FI S N+N+ Sbjct: 201 VLKENFQWTDAEFQFIPCSGLLGSNLNK 228 >5OCH-A nrPDB Length = 612 Score = 30.9 bits (69), Expect = 0.37, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 24/51 (47%), Gaps = 17/51 (33%) Query: 23 ILLIGDSGVGKSC---LLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVK 70 + L+G SG GK+ LL RF + T G+ V ++G+ ++ Sbjct: 394 VALVGQSGGGKTTVASLLERF--------YDPTAGV------VMLDGRDLR 430 >1EFM-A nrPDB Length = 379 Score = 30.9 bits (69), Expect = 0.39, Method: Composition-based stats. Identities = 19/107 (17%), Positives = 29/107 (27%), Gaps = 5/107 (4%) Query: 32 GKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQERFRTITTAYYR 91 GK+ L GI V+ + D G + Sbjct: 23 GKTTLTAAITTVLAKTYGGAARGITINTSHVEYDTPTRHYAHVDCPGHADYVKNMITGAA 82 Query: 92 GAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQ-LLLVGNKSDM 137 G ILV TD + Q + + +++ NK DM Sbjct: 83 QMDGAILVVAATDGP----MPQTREHILLGRQVGVPYIIVFLNKCDM 125 >2QU8-A nrPDB Length = 228 Score = 30.9 bits (69), Expect = 0.42, Method: Composition-based stats. Identities = 36/205 (17%), Positives = 70/205 (34%), Gaps = 36/205 (17%) Query: 23 ILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDI---NGKKVKLQLWDTAGQ 79 I+L G VGKS + + F K + + + K K Q+ DT G Sbjct: 32 IILSGAPNVGKSSFMNIVSRANVD-----VQSYSFTTKNLYVGHFDHKLNKYQIIDTPGL 86 Query: 80 E----------RFRTITTAYYRGAMGIILVYDVTDE--RTFTNIKQWFKTVNEHANDEAQ 127 TIT + I+ + D++++ T F ++ ++++ Sbjct: 87 LDRAFENRNTIEMTTITALAHING-VILFIIDISEQCGLTIKEQINLFYSIKSVFSNKSI 145 Query: 128 LLLVGNKSDMETRVVTADQGEALA-------KELGIPFIESSAKNDDNVNEIFFTLAKLI 180 ++ NK D + + + L + I F S V + T +L+ Sbjct: 146 VIGF-NKID-KCNMDSLSIDNKLLIKQILDNVKNPIKFSSFSTLTGVGVEQAKITACELL 203 Query: 181 QEK------IDSNKLVGVGNGKEGN 199 + +D +L+ G+ N Sbjct: 204 KNDQAESILLDQEQLLNTKLGETKN 228 >6C2V-A nrPDB Length = 115 Score = 30.9 bits (69), Expect = 0.43, Method: Composition-based stats. Identities = 10/34 (29%), Positives = 20/34 (58%), Gaps = 2/34 (5%) Query: 23 ILLIGDSGVGKSCL--LVRFVEDKFNPSFITTIG 54 ++++G SG GK+ L L R +++ + I T+ Sbjct: 5 VVIVGPSGAGKTTLDELARKAKEEVPDAEIRTVT 38 Score = 27.1 bits (59), Expect = 6.4, Method: Composition-based stats. Identities = 10/38 (26%), Positives = 20/38 (52%), Gaps = 1/38 (2%) Query: 23 ILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIK 60 ++++G SG GKS L + V+ + TI + + + Sbjct: 58 VVIVGPSGSGKSTLA-KIVKKIIARAGAKTIEVTTEEE 94 >2P8Y-T nrPDB Length = 842 Score = 30.9 bits (69), Expect = 0.44, Method: Composition-based stats. Identities = 23/103 (22%), Positives = 39/103 (37%), Gaps = 9/103 (8%) Query: 55 IDFKIKTVDINGKKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFT-NIKQ 113 D K +G + L D+ G F + TA R G ++V D T Q Sbjct: 84 EDVKEIKQKTDGNSFLINLIDSPGHVDFSSEVTAALRVTDGALVVVD-----TIEGVCVQ 138 Query: 114 WFKTVNEHANDEAQLLLVGNKSD---METRVVTADQGEALAKE 153 + + + + ++V NK D +E +V D + A+ Sbjct: 139 TETVLRQALGERIKPVVVINKVDRALLELQVSKEDLYQTFART 181 >5A9Z-CA nrPDB Length = 593 Score = 30.9 bits (69), Expect = 0.46, Method: Composition-based stats. Identities = 20/127 (15%), Positives = 38/127 (29%), Gaps = 26/127 (20%) Query: 32 GKSCLLVRFVE--DKFNP------------SFITTIGIDFKIKTVDINGKKVKLQLWDTA 77 GK+ L+ + ++ F+ GI K ++ + DT Sbjct: 17 GKTTLVDKLLQQSGTFDSRAETQERVMDSNDLEKERGITILAKNTAAIKWDYRINIVDTP 76 Query: 78 GQERFRTITTAYYRGAMGIILVYDVTD----ERTFTNIKQWFKTVNEHANDEAQLLLVGN 133 G F ++LV D D + F K + + ++++ N Sbjct: 77 GHADFGGEVERVMSMVDSVLLVVDAFDGPMPQTRFVTKKAFAYGLK-------PIVVI-N 128 Query: 134 KSDMETR 140 K D Sbjct: 129 KVDRPGA 135 >4F4J-A nrPDB Length = 202 Score = 30.6 bits (68), Expect = 0.48, Method: Composition-based stats. Identities = 31/188 (16%), Positives = 63/188 (33%), Gaps = 39/188 (20%) Query: 23 ILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQERF 82 I++ G SG GKS LL + + + + + ++NGK D F Sbjct: 20 IVISGPSGTGKSTLLKKLFAEYPDSFGFSVPSTTRTPRAGEVNGKDYNFVSVD-----EF 74 Query: 83 RTITT------------AYYRGAMG-----------IILVYDVTDERTFTNIKQWFKTVN 119 +++ YY + IL D+ ++ I + Sbjct: 75 KSMIKNNEFIEWAQFSGNYYGSTVASVKQVSKSGKTCILDIDMQGVKSVKAIPELNARFL 134 Query: 120 EHANDEAQLLLVGNKSDMETRVVTADQG---EALAKELGIPFIESSAKN----DDNVNEI 172 A + L K +E R ++ A + + + E+ A + +D++++ Sbjct: 135 FIAPPSVEDL----KKRLEGRGTETEESINKRLSAAQAELAYAETGAHDKVIVNDDLDKA 190 Query: 173 FFTLAKLI 180 + L I Sbjct: 191 YKELKDFI 198 >1JAL-A nrPDB Length = 363 Score = 30.6 bits (68), Expect = 0.51, Method: Composition-based stats. Identities = 7/22 (31%), Positives = 10/22 (45%) Query: 21 MKILLIGDSGVGKSCLLVRFVE 42 K ++G VGKS L + Sbjct: 3 FKCGIVGLPNVGKSTLFNALTK 24 >3IZQ-1 nrPDB Length = 611 Score = 30.6 bits (68), Expect = 0.55, Method: Composition-based stats. Identities = 27/147 (18%), Positives = 40/147 (27%), Gaps = 35/147 (23%) Query: 24 LLIGDSGVGKSCLLVRFVED------------------------KFNPSFITTI-----G 54 +++G GKS L+ R + D KF T G Sbjct: 171 VVLGHVDAGKSTLMGRLLYDLNIVNQSQLRKLQRESETMGKSSFKFAWIMDQTNEERERG 230 Query: 55 IDFKIKTVDINGKKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQW 114 + I T + + + D G F A IL D F + Sbjct: 231 VTVSICTSHFSTHRANFTIVDAPGHRDFVPNAIMGISQADMAILCVDC-STNAFESGFDL 289 Query: 115 FKTVNEH-----ANDEAQLLLVGNKSD 136 EH + L++ NK D Sbjct: 290 DGQTKEHMLLASSLGIHNLIIAMNKMD 316 >5G06-P nrPDB Length = 747 Score = 30.6 bits (68), Expect = 0.55, Method: Composition-based stats. Identities = 34/208 (16%), Positives = 66/208 (31%), Gaps = 60/208 (28%) Query: 23 ILLIGDSGVGKSCLLVRFVED-------------KFNPSFITTIGIDFKI---------- 59 L +GD+ GKS LL + D K + + + FK+ Sbjct: 270 CLFLGDTNAGKSTLLGHLLYDLNEISMSSMRELQKKSSNLDPSSSNSFKVILDNTKTERE 329 Query: 60 -------KTVDINGKKV----KLQLWDTAGQERF---RTITTAYYRGAMGIILVYDVT-- 103 K + + + L L DT G ++ T+ + +LV D Sbjct: 330 NGFSMFKKVIQVENDLLPPSSTLTLIDTPGSIKYFNKETLNSILTFDPEVYVLVIDCNYD 389 Query: 104 ---------DERTFTNIKQWFKTVNEHANDEAQLLLVGNKSDM------ETRVVTADQGE 148 + + + +K A + ++L+ NK+D+ ++ ++ Sbjct: 390 SWEKSLDGPNNQIYEILKVISYLNKNSACKKHLIILL-NKADLISWDKHRLEMIQSELNY 448 Query: 149 ALAKEL-----GIPFIESSAKNDDNVNE 171 L + FI S N+N+ Sbjct: 449 VLKENFQWTDAEFQFIPCSGLLGSNLNK 476 >3P27-A nrPDB Length = 483 Score = 30.6 bits (68), Expect = 0.55, Method: Composition-based stats. Identities = 27/147 (18%), Positives = 40/147 (27%), Gaps = 35/147 (23%) Query: 24 LLIGDSGVGKSCLLVRFVED------------------------KFNPSFITTI-----G 54 +++G GKS L+ R + D KF T G Sbjct: 37 VVLGHVDAGKSTLMGRLLYDLNIVNQSQLRKLQRESETMGKSSFKFAWIMDQTNEERERG 96 Query: 55 IDFKIKTVDINGKKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQW 114 + I T + + + D G F A IL D F + Sbjct: 97 VTVSICTSHFSTHRANFTIVDAPGHRDFVPNAIMGISQADMAILCVDC-STNAFESGFDL 155 Query: 115 FKTVNEH-----ANDEAQLLLVGNKSD 136 EH + L++ NK D Sbjct: 156 DGQTKEHMLLASSLGIHNLIIAMNKMD 182 >2IT1-A nrPDB Length = 362 Score = 30.6 bits (68), Expect = 0.56, Method: Composition-based stats. Identities = 18/52 (34%), Positives = 21/52 (40%), Gaps = 7/52 (13%) Query: 13 NGKSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIG-IDFKIKTVD 63 N K D + L+G SG GKS LL + T G I F K V Sbjct: 23 NLKIKDGEF-MALLGPSGSGKSTLLYTIAG-----IYKPTSGKIYFDEKDVT 68 >5ZLU-EE nrPDB Length = 497 Score = 30.6 bits (68), Expect = 0.60, Method: Composition-based stats. Identities = 25/92 (27%), Positives = 42/92 (45%), Gaps = 17/92 (18%) Query: 22 KILLIGDSGVGKSCLLVRFVED---------KFNP-SFITTIGIDFKIKTVDINGKKVKL 71 +I L+GD+G GKS LL + +F + I+ +G +I+TV+ +L Sbjct: 32 RIGLVGDNGAGKSSLLKVLNGEIVLAEATLQRFGDFAHISQLG-GIEIETVEDRAMLSRL 90 Query: 72 QLW----DT--AGQERFRTITTAYYRGAMGII 97 + DT G+E I A+ + GI+ Sbjct: 91 GVSNVQNDTMSGGEETRAKIAAAFSQQVHGIL 122 Score = 29.8 bits (66), Expect = 0.81, Method: Composition-based stats. Identities = 10/40 (25%), Positives = 17/40 (42%) Query: 22 KILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKT 61 K+ + G +G GK+ LL E + I + +T Sbjct: 324 KVAITGSNGTGKTSLLKMISERADGLTISPKAEIGYFTQT 363 >5AUQ-A nrPDB Length = 248 Score = 30.2 bits (67), Expect = 0.64, Method: Composition-based stats. Identities = 17/86 (19%), Positives = 37/86 (43%), Gaps = 12/86 (13%) Query: 98 LVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSDMETRVVTAD-QGEALAKELGI 156 LV + + +++ + + E + + +V N + + + + E LA+E G+ Sbjct: 154 LVVATPSKLSLNVVRKLIELLKEEGHK--VIGVVENMK-LRSEQLDDEKDVEKLAEEFGV 210 Query: 157 PFI-------ESSAKNDDNVNEIFFT 175 P++ + AK NV E+ T Sbjct: 211 PYLVGIPFYPDLDAKVG-NVEELMKT 235 >4RDY-A nrPDB Length = 316 Score = 30.2 bits (67), Expect = 0.68, Method: Composition-based stats. Identities = 13/53 (24%), Positives = 23/53 (43%), Gaps = 11/53 (20%) Query: 119 NEHANDEAQLL---LVGNKSDMETRVVTADQGEALAKEL--------GIPFIE 160 H + ++ VGNKS ++ + ++G LA+ + I FIE Sbjct: 160 KAHIKTDVPIITHSFVGNKSSLDLIRIFKEEGVDLARTVIGHVGDTDDISFIE 212 >3FVQ-A nrPDB Length = 359 Score = 30.2 bits (67), Expect = 0.68, Method: Composition-based stats. Identities = 9/26 (34%), Positives = 13/26 (50%) Query: 23 ILLIGDSGVGKSCLLVRFVEDKFNPS 48 + +IG SG GK+ LL + S Sbjct: 33 LFIIGASGCGKTTLLRCLAGFEQPDS 58 >5C78-A nrPDB Length = 564 Score = 30.2 bits (67), Expect = 0.72, Method: Composition-based stats. Identities = 10/16 (62%), Positives = 12/16 (75%) Query: 22 KILLIGDSGVGKSCLL 37 KI IG+SG GKS L+ Sbjct: 377 KIAFIGESGCGKSTLV 392 >4FIN-A nrPDB Length = 555 Score = 30.2 bits (67), Expect = 0.72, Method: Composition-based stats. Identities = 13/39 (33%), Positives = 19/39 (48%) Query: 25 LIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVD 63 +IG +G GKS L + S T+G K+ +VD Sbjct: 354 IIGPNGAGKSTLFRMISGQEQPDSGTITLGETVKLASVD 392 Score = 28.2 bits (62), Expect = 2.4, Method: Composition-based stats. Identities = 9/16 (56%), Positives = 12/16 (75%) Query: 22 KILLIGDSGVGKSCLL 37 KI ++G +G GKS LL Sbjct: 34 KIGVLGLNGAGKSTLL 49 >2IW3-A nrPDB Length = 986 Score = 30.2 bits (67), Expect = 0.72, Method: Composition-based stats. Identities = 9/27 (33%), Positives = 14/27 (51%) Query: 22 KILLIGDSGVGKSCLLVRFVEDKFNPS 48 +I +IG +G GKS L+ + S Sbjct: 701 RIAVIGPNGAGKSTLINVLTGELLPTS 727 >3V9H-A nrPDB Length = 566 Score = 30.2 bits (67), Expect = 0.74, Method: Composition-based stats. Identities = 10/35 (28%), Positives = 17/35 (48%), Gaps = 3/35 (8%) Query: 102 VTDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSD 136 V D ++F IK+W + + + +L G K D Sbjct: 394 VIDAKSFARIKKWLEHAR---SSPSLTILAGGKCD 425 >3J81-k nrPDB Length = 527 Score = 30.2 bits (67), Expect = 0.77, Method: Composition-based stats. Identities = 12/60 (20%), Positives = 27/60 (45%), Gaps = 8/60 (13%) Query: 128 LLLVGNKSDMETRVVTADQGEALAKEL-------GIPFIESSAKNDDNVNEIFFTLAKLI 180 ++++ NK D+ R +A + + + G P + SA+ N++ + + K I Sbjct: 244 VIILQNKVDL-MREESALEHQKSILKFIRGTIADGAPIVPISAQLKYNIDAVNEFIVKTI 302 >5LL6-h nrPDB Length = 608 Score = 30.2 bits (67), Expect = 0.77, Method: Composition-based stats. Identities = 10/53 (18%), Positives = 23/53 (43%), Gaps = 1/53 (1%) Query: 12 GNGKSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDI 64 G+ DS + ++++G++G GK+ L+ ++ +K I Sbjct: 371 EEGEFSDSEI-LVMMGENGTGKTTLIKLLAGALKPDEGQDIPKLNVSMKPQKI 422 >5IFK-A nrPDB Length = 312 Score = 30.2 bits (67), Expect = 0.79, Method: Composition-based stats. Identities = 12/43 (27%), Positives = 23/43 (53%), Gaps = 4/43 (9%) Query: 138 ETRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLI 180 + V +G+A +E+ +E+SAK +V E+ F++ I Sbjct: 268 DENPVPIQEGKATHEEV----LENSAKASKDVQELIFSVVAEI 306 >3IBY-A nrPDB Length = 256 Score = 29.8 bits (66), Expect = 0.83, Method: Composition-based stats. Identities = 34/187 (18%), Positives = 61/187 (32%), Gaps = 23/187 (12%) Query: 24 LLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAG----- 78 LLIG+ GK+ L N G+ + KT + + +++ D G Sbjct: 5 LLIGNPNCGKTTLFNALTNA--NQRVGNWPGVTVEKKTGEFLLGEHLIEITDLPGVYSLV 62 Query: 79 -------QERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLV 131 Q+ + II V D + + + +++ Sbjct: 63 ANAEGISQDEQIAAQSVIDLEYDCIINVIDACHLERHLYLTSQLFELGK------PVVVA 116 Query: 132 GNKSDM-ETRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEKIDSNKLV 190 N D+ E R ++ D E L LG I A + + + +L +KI KL Sbjct: 117 LNMMDIAEHRGISID-TEKLESLLGCSVIPIQAHKNIGIPALQQSLLH-CSQKIKPLKLS 174 Query: 191 GVGNGKE 197 ++ Sbjct: 175 LSVAAQQ 181 >2R65-A nrPDB Length = 268 Score = 29.8 bits (66), Expect = 0.83, Method: Composition-based stats. Identities = 26/118 (22%), Positives = 47/118 (39%), Gaps = 16/118 (13%) Query: 23 ILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQ--- 79 +LL+G G GK+ L + P F G F V + +V+ L++TA + Sbjct: 47 VLLVGPPGTGKTLLAKAVAGEAHVPFFSMG-GSSFIEMFVGLGASRVR-DLFETAKKQAP 104 Query: 80 -----ERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVG 132 + I + R A G V DER + Q ++ ++ A ++++ Sbjct: 105 SIIFIDEIDAIGKS--RAAGG---VVSGNDERE-QTLNQLLAEMDGFGSENAPVIVLA 156 >4FGW-A nrPDB Length = 391 Score = 29.8 bits (66), Expect = 0.86, Method: Composition-based stats. Identities = 15/68 (22%), Positives = 31/68 (45%), Gaps = 5/68 (7%) Query: 5 RTVSASSGNGKSYDSIMKILLIGDSGVGKSCLLVRFVEDK--FNPSFITTIGIDFKIKTV 62 R S+SS + K+ + K+ +IG G + + E+ + F + + + Sbjct: 19 RKRSSSSVSLKAAEKPFKVTVIGSGNWG-TTIAKVVAENCKGYPEVFAPIVQMWVFEE-- 75 Query: 63 DINGKKVK 70 +ING+K+ Sbjct: 76 EINGEKLT 83 >2GZA-A nrPDB Length = 361 Score = 29.8 bits (66), Expect = 0.86, Method: Composition-based stats. Identities = 10/34 (29%), Positives = 20/34 (58%), Gaps = 2/34 (5%) Query: 23 ILLIGDSGVGKSCLLVRFVED-KFNPSFITTIGI 55 I++ G++G GK+ L+ +++ F+ I TI Sbjct: 178 IVVAGETGSGKTTLMKALMQEIPFDQRLI-TIED 210 >3B5X-A nrPDB Length = 582 Score = 29.8 bits (66), Expect = 0.90, Method: Composition-based stats. Identities = 12/48 (25%), Positives = 20/48 (41%), Gaps = 11/48 (22%) Query: 23 ILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVK 70 + L+G SG GKS + F T D ++ ++G V+ Sbjct: 372 VALVGRSGSGKSTIANLF-----------TRFYDVDSGSICLDGHDVR 408 >5JZV-A nrPDB Length = 206 Score = 29.8 bits (66), Expect = 0.93, Method: Composition-based stats. Identities = 11/35 (31%), Positives = 18/35 (51%) Query: 2 SGLRTVSASSGNGKSYDSIMKILLIGDSGVGKSCL 36 S + +++ G+ + ILL G GVGK+ L Sbjct: 19 SHMASMTGGQQMGRGSMLLPNILLTGTPGVGKTTL 53 >5D4W-A nrPDB Length = 926 Score = 29.8 bits (66), Expect = 1.0, Method: Composition-based stats. Identities = 7/14 (50%), Positives = 12/14 (85%) Query: 24 LLIGDSGVGKSCLL 37 +LIG+ GVGK+ ++ Sbjct: 220 VLIGEPGVGKTTIV 233 >1R6B-X nrPDB Length = 758 Score = 29.8 bits (66), Expect = 1.0, Method: Composition-based stats. Identities = 11/28 (39%), Positives = 15/28 (53%), Gaps = 4/28 (14%) Query: 24 LLIGDSGVGKSC----LLVRFVEDKFNP 47 LL+G+SGVGK+ L R V+ Sbjct: 211 LLVGESGVGKTAIAEGLAWRIVQGDVPE 238 >3JVU-A nrPDB Length = 356 Score = 29.4 bits (65), Expect = 1.1, Method: Composition-based stats. Identities = 33/170 (19%), Positives = 58/170 (34%), Gaps = 32/170 (18%) Query: 23 ILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQERF 82 +L+ G +G GKS L ++ N + + I+ I+ V KK + Sbjct: 126 VLVTGPTGSGKSTTLAAMLDYLNNTKYHHILTIEDPIEFVH-ESKKCLVN---------- 174 Query: 83 RTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSDMETRVV 142 +R +G + + ++ ++LVG D+ET + Sbjct: 175 ---QREVHRDTLGFS------------------EALRSALREDPDIILVGEMRDLETIRL 213 Query: 143 TADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEKIDSNKLVGV 192 E G S+AK D V ++F K + + S L V Sbjct: 214 ALTAAETGHLVFGTLHTTSAAKTIDRVVDVFPAEEKAMVRSMLSESLQSV 263 >2YYZ-A nrPDB Length = 359 Score = 29.4 bits (65), Expect = 1.1, Method: Composition-based stats. Identities = 10/51 (19%), Positives = 19/51 (37%), Gaps = 6/51 (11%) Query: 15 KSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDIN 65 + D + L+G SG GK+ L+ + T G + + + Sbjct: 25 EVKDGEF-VALLGPSGCGKTTTLLMLAG-----IYKPTSGEIYFDDVLVND 69 >4RY2-A nrPDB Length = 730 Score = 29.4 bits (65), Expect = 1.1, Method: Composition-based stats. Identities = 6/20 (30%), Positives = 12/20 (60%) Query: 23 ILLIGDSGVGKSCLLVRFVE 42 + ++G+SG GK+ L + Sbjct: 518 VAIVGESGSGKTTLAKLLMN 537 >3PXG-A nrPDB Length = 468 Score = 29.4 bits (65), Expect = 1.1, Method: Composition-based stats. Identities = 12/44 (27%), Positives = 24/44 (54%), Gaps = 1/44 (2%) Query: 24 LLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGK 67 +LIG+ GVGK+ + + + + + I D ++ T+D+ K Sbjct: 205 VLIGEPGVGKTAIAEGLAQ-QIINNEVPEILRDKRVMTLDMGTK 247 >6HA8-V nrPDB Length = 548 Score = 29.4 bits (65), Expect = 1.1, Method: Composition-based stats. Identities = 13/66 (19%), Positives = 22/66 (33%), Gaps = 21/66 (31%) Query: 22 KILLIGDSGVGKSCLLVR---------------------FVEDKFNPSFITTIGIDFKIK 60 K+ +IG +G GK+ LL ++ F+ T F+ + Sbjct: 325 KVAIIGPNGSGKTTLLNIILGQETAEGSVWVSPSANIGYLTQEVFDLPLEQTPEELFENE 384 Query: 61 TVDING 66 T G Sbjct: 385 TFKARG 390 >5TY0-A nrPDB Length = 422 Score = 29.4 bits (65), Expect = 1.2, Method: Composition-based stats. Identities = 13/70 (18%), Positives = 26/70 (37%), Gaps = 4/70 (5%) Query: 67 KKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEA 126 + ++ + DT G F R G ++V+D + W + N++ Sbjct: 81 ESHRINIIDTPGHVDFMIEVERSLRVLDGAVVVFDSVAGVEPQSETVW-RQANKYG---V 136 Query: 127 QLLLVGNKSD 136 ++ NK D Sbjct: 137 PRIVFVNKMD 146 >1LVG-A nrPDB Length = 198 Score = 29.4 bits (65), Expect = 1.2, Method: Composition-based stats. Identities = 9/22 (40%), Positives = 14/22 (63%) Query: 23 ILLIGDSGVGKSCLLVRFVEDK 44 ++L G SG GKS LL + ++ Sbjct: 7 VVLSGPSGAGKSTLLKKLFQEH 28 >3PXI-A nrPDB Length = 758 Score = 29.4 bits (65), Expect = 1.2, Method: Composition-based stats. Identities = 12/44 (27%), Positives = 24/44 (54%), Gaps = 1/44 (2%) Query: 24 LLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGK 67 +LIG+ GVGK+ + + + + + I D ++ T+D+ K Sbjct: 205 VLIGEPGVGKTAIAEGLAQ-QIINNEVPEILRDKRVMTLDMGTK 247 >5B57-C nrPDB Length = 273 Score = 29.4 bits (65), Expect = 1.3, Method: Composition-based stats. Identities = 9/20 (45%), Positives = 12/20 (60%) Query: 24 LLIGDSGVGKSCLLVRFVED 43 L+G +G GKS LL F + Sbjct: 31 ALLGRNGAGKSTLLKTFAGE 50 >5MKK-A nrPDB Length = 611 Score = 29.4 bits (65), Expect = 1.3, Method: Composition-based stats. Identities = 9/22 (40%), Positives = 14/22 (63%), Gaps = 3/22 (13%) Query: 22 KILLIGDSGVGKS---CLLVRF 40 K+ L+G +G GK+ L+ RF Sbjct: 387 KVALVGATGAGKTSVVSLIARF 408 >6QUZ-B nrPDB Length = 599 Score = 29.4 bits (65), Expect = 1.3, Method: Composition-based stats. Identities = 10/22 (45%), Positives = 15/22 (68%), Gaps = 3/22 (13%) Query: 22 KILLIGDSGVGKSC---LLVRF 40 K+ L+G +G GK+ LL+RF Sbjct: 383 KVALVGPTGSGKTTIVNLLMRF 404 >6FT6-s nrPDB Length = 520 Score = 29.4 bits (65), Expect = 1.3, Method: Composition-based stats. Identities = 19/88 (21%), Positives = 38/88 (43%), Gaps = 13/88 (14%) Query: 1 MSGLRTVSASSGNGKSYD------SIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTI- 53 +S T SA + K+Y + + +IG VGKS ++ + + S + Sbjct: 255 LSQTTTASALLESLKTYSNNSNLKRSIVVGVIGYPNVGKSSVINALLARRGGQSKACPVG 314 Query: 54 ---GIDFKIKTVDINGKKVKLQLWDTAG 78 G+ ++ + I+ K L++ D+ G Sbjct: 315 NEAGVTTSLREIKIDNK---LKILDSPG 339 >6FA9-A nrPDB Length = 655 Score = 29.0 bits (64), Expect = 1.4, Method: Composition-based stats. Identities = 5/21 (23%), Positives = 16/21 (76%) Query: 23 ILLIGDSGVGKSCLLVRFVED 43 ++L+G++G GK+ + +++ + Sbjct: 50 LILVGETGSGKTTQIPQYLHE 70 >4MRS-A nrPDB Length = 614 Score = 29.0 bits (64), Expect = 1.4, Method: Composition-based stats. Identities = 10/22 (45%), Positives = 14/22 (63%), Gaps = 3/22 (13%) Query: 22 KILLIGDSGVGKSC---LLVRF 40 ++ ++G SG GKS LL RF Sbjct: 389 RVAIVGPSGAGKSTIARLLFRF 410 >4V6W-Az nrPDB Length = 844 Score = 29.0 bits (64), Expect = 1.4, Method: Composition-based stats. Identities = 16/70 (22%), Positives = 24/70 (34%), Gaps = 4/70 (5%) Query: 67 KKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEA 126 K + L D+ G F + TA R G ++V D + + E Sbjct: 100 KGFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCVSGVCVQTETVLRQAIAERIKP-- 157 Query: 127 QLLLVGNKSD 136 +L NK D Sbjct: 158 --ILFMNKMD 165 >2PJZ-A nrPDB Length = 263 Score = 29.0 bits (64), Expect = 1.5, Method: Composition-based stats. Identities = 7/16 (43%), Positives = 13/16 (81%) Query: 22 KILLIGDSGVGKSCLL 37 K++++G +G GK+ LL Sbjct: 32 KVIILGPNGSGKTTLL 47 >3VAA-A nrPDB Length = 199 Score = 29.0 bits (64), Expect = 1.5, Method: Composition-based stats. Identities = 12/55 (21%), Positives = 20/55 (36%), Gaps = 10/55 (18%) Query: 16 SYDSIMKILLIGDSGVGKSCLLVRFVED----------KFNPSFITTIGIDFKIK 60 +++++I L G G GK+ L F F T+G F + Sbjct: 21 QSNAMVRIFLTGYMGAGKTTLGKAFARKLNVPFIDLDWYIEERFHKTVGELFTER 75 >6EMW-E nrPDB Length = 181 Score = 29.0 bits (64), Expect = 1.5, Method: Composition-based stats. Identities = 9/30 (30%), Positives = 15/30 (50%) Query: 24 LLIGDSGVGKSCLLVRFVEDKFNPSFITTI 53 +LIG+ GVGK+ + + N T+ Sbjct: 44 VLIGEPGVGKTAIAEGLAQAIVNNEVPETL 73 >1PUI-A nrPDB Length = 210 Score = 29.0 bits (64), Expect = 1.6, Method: Composition-based stats. Identities = 32/191 (16%), Positives = 67/191 (35%), Gaps = 29/191 (15%) Query: 6 TVSASSGNGKSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDI- 64 +SA D+ +++ G S GKS L K T G I ++ Sbjct: 12 VMSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEVA 71 Query: 65 NGKKVKLQLWDTAGQ------ERFRTITTA----YY---RGAMGIILVYDVTDERTFTNI 111 +GK+ L D G E + Y + G++++ D+ ++ Sbjct: 72 DGKR----LVDLPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDI--RHPLKDL 125 Query: 112 KQWFKTVNEHANDEAQLLLVGNKSDMETRVVTADQGEALAKELGIPF-----IES-SAKN 165 Q + + + +L++ K+D + + +E + F +E+ S+ Sbjct: 126 DQ--QMIEWAVDSNIAVLVLLTKAD-KLASGARKAQLNMVREAVLAFNGDVQVETFSSLK 182 Query: 166 DDNVNEIFFTL 176 V+++ L Sbjct: 183 KQGVDKLRQKL 193 >5EUF-A nrPDB Length = 419 Score = 29.0 bits (64), Expect = 1.6, Method: Composition-based stats. Identities = 10/48 (20%), Positives = 20/48 (41%), Gaps = 1/48 (2%) Query: 81 RFRTITTAYYRGAMGIILVY-DVTDERTFTNIKQWFKTVNEHANDEAQ 127 + + YY+ I+LV DV ++ F K+ F+++ Sbjct: 178 DIKKFHSLYYQPKNAIVLVVGDVNSQKVFELTKKHFESLKNLDEKAIP 225 >6EM8-A nrPDB Length = 818 Score = 29.0 bits (64), Expect = 1.6, Method: Composition-based stats. Identities = 9/30 (30%), Positives = 15/30 (50%) Query: 24 LLIGDSGVGKSCLLVRFVEDKFNPSFITTI 53 +LIG+ GVGK+ + + N T+ Sbjct: 205 VLIGEPGVGKTAIAEGLAQAIVNNEVPETL 234 >3GD7-A nrPDB Length = 390 Score = 29.0 bits (64), Expect = 1.6, Method: Composition-based stats. Identities = 12/42 (28%), Positives = 21/42 (50%) Query: 22 KILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVD 63 ++ L+G +G GKS LL F+ I G+ + T++ Sbjct: 49 RVGLLGRTGSGKSTLLSAFLRLLNTEGEIQIDGVSWDSITLE 90 >1QVR-A nrPDB Length = 854 Score = 29.0 bits (64), Expect = 1.6, Method: Composition-based stats. Identities = 10/28 (35%), Positives = 14/28 (50%), Gaps = 4/28 (14%) Query: 24 LLIGDSGVGKSC----LLVRFVEDKFNP 47 +LIG+ GVGK+ L R V+ Sbjct: 195 VLIGEPGVGKTAIVEGLAQRIVKGDVPE 222 >6N0I-A nrPDB Length = 706 Score = 29.0 bits (64), Expect = 1.7, Method: Composition-based stats. Identities = 15/69 (21%), Positives = 23/69 (33%), Gaps = 4/69 (5%) Query: 68 KVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQ 127 K + + DT G F R G ++V+ D + W + H A Sbjct: 85 KYRFNIIDTPGHVDFTIEVERSLRVLDGAVVVFSGADGVEPQSETVWRQANKYHVPRLAY 144 Query: 128 LLLVGNKSD 136 + NK D Sbjct: 145 I----NKMD 149 >4CIU-A nrPDB Length = 727 Score = 29.0 bits (64), Expect = 1.7, Method: Composition-based stats. Identities = 9/28 (32%), Positives = 14/28 (50%), Gaps = 4/28 (14%) Query: 24 LLIGDSGVGKSC----LLVRFVEDKFNP 47 +LIG+ GVGK+ L R + + Sbjct: 61 VLIGEPGVGKTAIVEGLAQRIINGEVPE 88 >5OFO-C nrPDB Length = 871 Score = 29.0 bits (64), Expect = 1.7, Method: Composition-based stats. Identities = 9/28 (32%), Positives = 14/28 (50%), Gaps = 4/28 (14%) Query: 24 LLIGDSGVGKSC----LLVRFVEDKFNP 47 +LIG+ GVGK+ L R + + Sbjct: 207 VLIGEPGVGKTAIVEGLAQRIINGEVPE 234 >1YR7-A nrPDB Length = 262 Score = 29.0 bits (64), Expect = 1.7, Method: Composition-based stats. Identities = 10/59 (16%), Positives = 26/59 (44%), Gaps = 9/59 (15%) Query: 7 VSASSGNGKSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDIN 65 + S + + M ++ +G +G GK+ L F ++ ++K+ V+++ Sbjct: 1 MRGSHHHHHHGMASMIVVFVGTAGSGKTTLTGEF--GRYLED-------NYKVAYVNLD 50 >5W7Q-A nrPDB Length = 373 Score = 29.0 bits (64), Expect = 1.7, Method: Composition-based stats. Identities = 18/121 (14%), Positives = 30/121 (24%), Gaps = 19/121 (15%) Query: 32 GKSCLLVRFVE------DKFNPSFITT--------IGIDFKIKTVDINGKKVKLQLWDTA 77 GK+ L ++ GI V+ + D Sbjct: 17 GKTTLTAAITTVLAKKGGAEAKAYDQIDNAPEEKARGITINTAHVEYETENRHYAHVDCP 76 Query: 78 GQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQ-LLLVGNKSD 136 G + G ILV D + Q + + +++ NK D Sbjct: 77 GHADYVKNMITGAAQMDGAILVVSAADGP----MPQTREHILLARQVGVPYIVVFLNKCD 132 Query: 137 M 137 M Sbjct: 133 M 133 >2NQL-A nrPDB Length = 388 Score = 29.0 bits (64), Expect = 1.8, Method: Composition-based stats. Identities = 8/18 (44%), Positives = 11/18 (61%) Query: 71 LQLWDTAGQERFRTITTA 88 + LWD AGQE ++I Sbjct: 128 IALWDIAGQEAGKSIRDL 145 >4G1U-C nrPDB Length = 266 Score = 29.0 bits (64), Expect = 1.8, Method: Composition-based stats. Identities = 11/27 (40%), Positives = 16/27 (59%), Gaps = 1/27 (3%) Query: 23 ILLIGDSGVGKSCLLVRFVEDKFNPSF 49 + +IG +G GKS LL R + +PS Sbjct: 40 VAIIGPNGAGKSTLL-RLLTGYLSPSH 65 >2AXV-A nrPDB Length = 317 Score = 28.6 bits (63), Expect = 1.8, Method: Composition-based stats. Identities = 7/39 (17%), Positives = 19/39 (48%) Query: 134 KSDMETRVVTADQGEALAKELGIPFIESSAKNDDNVNEI 172 K + ++R ++ ++ ++ LG+ F E + N + Sbjct: 34 KVEADSRPISVEELSKFSERLGVNFFEILNRAGMNTKSV 72 >3GMT-A nrPDB Length = 230 Score = 28.6 bits (63), Expect = 1.8, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 20/40 (50%), Gaps = 1/40 (2%) Query: 13 NGKSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITT 52 + M+++L+G G GK F+++KF I+T Sbjct: 1 MAHHHHHHMRLILLGAPGAGKGTQAN-FIKEKFGIPQIST 39 >1JBK-A nrPDB Length = 195 Score = 28.6 bits (63), Expect = 1.8, Method: Composition-based stats. Identities = 9/28 (32%), Positives = 14/28 (50%), Gaps = 4/28 (14%) Query: 24 LLIGDSGVGKSC----LLVRFVEDKFNP 47 +LIG+ GVGK+ L R + + Sbjct: 47 VLIGEPGVGKTAIVEGLAQRIINGEVPE 74 >4NP6-A nrPDB Length = 217 Score = 28.6 bits (63), Expect = 1.9, Method: Composition-based stats. Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 1/32 (3%) Query: 21 MKILLIGDSGVGKSCLLVRFVEDKFNPSFITT 52 M+I+L+G G GK +F+ +KF I+T Sbjct: 4 MRIILLGAPGAGKGTQA-QFIMEKFGIPQIST 34 >4MYH-A nrPDB Length = 598 Score = 28.6 bits (63), Expect = 1.9, Method: Composition-based stats. Identities = 8/17 (47%), Positives = 11/17 (64%) Query: 22 KILLIGDSGVGKSCLLV 38 K ++G SG GKS +L Sbjct: 367 KTAIVGSSGSGKSTILK 383 >1OFI-A nrPDB Length = 310 Score = 28.6 bits (63), Expect = 1.9, Method: Composition-based stats. Identities = 14/58 (24%), Positives = 26/58 (44%), Gaps = 4/58 (6%) Query: 23 ILLIGDSGVGKSCLLVRFVE--DKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAG 78 IL+IG +GVGK+ + R + + T + +++ + L D+AG Sbjct: 53 ILMIGPTGVGKTEIARRLAKLANAPFIKVEATKFTEVGYVGKEVD--SIIRDLTDSAG 108 >5JSZ-B nrPDB Length = 287 Score = 28.6 bits (63), Expect = 1.9, Method: Composition-based stats. Identities = 12/32 (37%), Positives = 15/32 (46%), Gaps = 5/32 (15%) Query: 23 ILLIGDSGVGKSCLLVRFVEDKFNPSFITTIG 54 I L+G +G GKS L+ FN T G Sbjct: 36 IALVGHTGSGKSTLMQ-----HFNALLKPTSG 62 >3VX4-A nrPDB Length = 273 Score = 28.6 bits (63), Expect = 1.9, Method: Composition-based stats. Identities = 8/17 (47%), Positives = 11/17 (64%) Query: 22 KILLIGDSGVGKSCLLV 38 K+ L+G SG GK+ L Sbjct: 63 KVSLVGASGSGKTTLAK 79 >4Q7L-A nrPDB Length = 256 Score = 28.6 bits (63), Expect = 1.9, Method: Composition-based stats. Identities = 6/20 (30%), Positives = 13/20 (65%) Query: 22 KILLIGDSGVGKSCLLVRFV 41 K+ L+G +G GK+ ++ + Sbjct: 33 KVALVGPTGSGKTTIVNLLM 52 >6ED3-A nrPDB Length = 848 Score = 28.6 bits (63), Expect = 2.0, Method: Composition-based stats. Identities = 7/14 (50%), Positives = 12/14 (85%) Query: 24 LLIGDSGVGKSCLL 37 +LIG+ GVGK+ ++ Sbjct: 203 VLIGEPGVGKTAIV 216 >4HSE-A nrPDB Length = 397 Score = 28.6 bits (63), Expect = 2.0, Method: Composition-based stats. Identities = 10/28 (35%), Positives = 14/28 (50%), Gaps = 4/28 (14%) Query: 24 LLIGDSGVGKSC----LLVRFVEDKFNP 47 +LIG+ GVGK+ L R V+ Sbjct: 58 VLIGEPGVGKTAIVEGLAQRIVKGDVPE 85 >6I3O-A nrPDB Length = 677 Score = 28.6 bits (63), Expect = 2.0, Method: Composition-based stats. Identities = 4/27 (14%), Positives = 17/27 (62%) Query: 23 ILLIGDSGVGKSCLLVRFVEDKFNPSF 49 ++++G++G GK+ + +++ + + Sbjct: 31 LIVVGETGSGKTTQVTQYLAEAGFTKY 57 >1H65-A nrPDB Length = 270 Score = 28.6 bits (63), Expect = 2.0, Method: Composition-based stats. Identities = 13/59 (22%), Positives = 24/59 (40%), Gaps = 5/59 (8%) Query: 23 ILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKK--VKLQLWDTAGQ 79 IL++G GVGKS + + ++ + V ++ + L + DT G Sbjct: 42 ILVMGKGGVGKSSTVNSIIGERVVSIS---PFQSEGPRPVMVSRSRAGFTLNIIDTPGL 97 >6N8J-m nrPDB Length = 486 Score = 28.6 bits (63), Expect = 2.1, Method: Composition-based stats. Identities = 21/90 (23%), Positives = 36/90 (40%), Gaps = 11/90 (12%) Query: 78 GQERFRTITTAYYR---GAMGIILVYDVTDE--RTFTNIKQWFKTVNEHANDEAQLLLVG 132 GQ + I Y+ + +I V D D +++++ K H + L+ V Sbjct: 206 GQSK--RIWNELYKVIDSSDVVIHVLDARDPLGTRCKSVEEYMKKETPHKH----LIYVL 259 Query: 133 NKSDMETRVVTADQGEALAKELGIPFIESS 162 NK D+ V A + L+KE +S Sbjct: 260 NKCDLVPTWVAAAWVKHLSKERPTLAFHAS 289 >3J3U-A nrPDB Length = 810 Score = 28.6 bits (63), Expect = 2.2, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 22/40 (55%), Gaps = 1/40 (2%) Query: 24 LLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVD 63 +LIG+ GVGK+ + + + + + I D ++ T+D Sbjct: 205 VLIGEPGVGKTAIAEGLAQ-QIINNEVPEILRDKRVMTLD 243 >1E94-E nrPDB Length = 449 Score = 28.6 bits (63), Expect = 2.2, Method: Composition-based stats. Identities = 9/20 (45%), Positives = 14/20 (70%) Query: 23 ILLIGDSGVGKSCLLVRFVE 42 IL+IG +GVGK+ + R + Sbjct: 59 ILMIGPTGVGKTEIARRLAK 78 >6D00-1 nrPDB Length = 883 Score = 28.6 bits (63), Expect = 2.2, Method: Composition-based stats. Identities = 12/51 (23%), Positives = 21/51 (41%), Gaps = 13/51 (25%) Query: 11 SGNGKSYDSIMKIL---------LIGDSGVGKSC----LLVRFVEDKFNPS 48 G + ++++L L+G+ GVGK+ L R V+ S Sbjct: 181 IGRDEIISRVIRVLSRRTKNNPCLVGEPGVGKTAIAEGLANRIVKGDIPSS 231 >1IM2-A nrPDB Length = 444 Score = 28.6 bits (63), Expect = 2.2, Method: Composition-based stats. Identities = 9/20 (45%), Positives = 14/20 (70%) Query: 23 ILLIGDSGVGKSCLLVRFVE 42 IL+IG +GVGK+ + R + Sbjct: 53 ILMIGPTGVGKTEIARRLAK 72 >4N1A-A nrPDB Length = 589 Score = 28.6 bits (63), Expect = 2.2, Method: Composition-based stats. Identities = 13/45 (28%), Positives = 20/45 (44%), Gaps = 5/45 (11%) Query: 24 LLIGDSGVGKSCLLVRFVEDKFNPSFITT----IGIDFKIKTVDI 64 L+ GD+ GKS LL R + + I ID+ +D+ Sbjct: 387 LVFGDTECGKSNLL-RLITAGIIERYTPQQARLIFIDYSRSLLDV 430 >6FOC-D nrPDB Length = 475 Score = 28.6 bits (63), Expect = 2.3, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 29/65 (44%), Gaps = 7/65 (10%) Query: 22 KILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQ----LWDTA 77 KI L G +GVGK+ L+ + T++ +T + N V+L L DTA Sbjct: 155 KIALFGGAGVGKTVLIQEMINRIARNFGGTSVFAGVGERTREGNDLWVELADANVLKDTA 214 Query: 78 ---GQ 79 GQ Sbjct: 215 LVFGQ 219 >2P65-A nrPDB Length = 187 Score = 28.6 bits (63), Expect = 2.3, Method: Composition-based stats. Identities = 7/14 (50%), Positives = 12/14 (85%) Query: 24 LLIGDSGVGKSCLL 37 +L+GD GVGK+ ++ Sbjct: 47 ILLGDPGVGKTAIV 60 >1IHU-A nrPDB Length = 589 Score = 28.6 bits (63), Expect = 2.3, Method: Composition-based stats. Identities = 10/28 (35%), Positives = 16/28 (57%), Gaps = 4/28 (14%) Query: 23 ILLIGDSGVGKSC----LLVRFVEDKFN 46 I+L+G GVGK+ + VR + F+ Sbjct: 330 IMLMGKGGVGKTTMAAAIAVRLADMGFD 357 >3WMF-A nrPDB Length = 621 Score = 28.6 bits (63), Expect = 2.3, Method: Composition-based stats. Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 9/40 (22%) Query: 4 LRTVSASSGNGKSYDSIMKILLIGDSGVGKSC---LLVRF 40 LR +S + NGK+ + ++G SG GKS LL+RF Sbjct: 369 LRGISLTIPNGKT------VAIVGGSGAGKSTIIQLLMRF 402 >2GA8-A nrPDB Length = 359 Score = 28.6 bits (63), Expect = 2.3, Method: Composition-based stats. Identities = 12/57 (21%), Positives = 23/57 (40%), Gaps = 7/57 (12%) Query: 23 ILLIGDSGVGKSCLLVRFVE------DKFNPSFITTIGIDFKIKT-VDINGKKVKLQ 72 ++L+G G GKS + + F I ++ ++K V++ LQ Sbjct: 27 VILVGSPGSGKSTIAEELCQIINEKYHTFLSEHPNVIEVNDRLKPMVNLVDSLKTLQ 83 >6N8N-W nrPDB Length = 640 Score = 28.6 bits (63), Expect = 2.3, Method: Composition-based stats. Identities = 12/42 (28%), Positives = 19/42 (45%), Gaps = 1/42 (2%) Query: 25 LIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDING 66 L+G VGKS + V K S +T G +T+ ++ Sbjct: 341 LVGYPNVGKSSTINSLVGAKKV-SVSSTPGKTKHFQTIKLSD 381 >5NIK-J nrPDB Length = 654 Score = 28.6 bits (63), Expect = 2.3, Method: Composition-based stats. Identities = 7/18 (38%), Positives = 11/18 (61%) Query: 23 ILLIGDSGVGKSCLLVRF 40 + ++G SG GKS L+ Sbjct: 37 VAIVGASGSGKSTLMNIL 54 >5MRE-WW nrPDB Length = 401 Score = 28.6 bits (63), Expect = 2.3, Method: Composition-based stats. Identities = 8/18 (44%), Positives = 13/18 (72%) Query: 22 KILLIGDSGVGKSCLLVR 39 K ++ G+ GVGK+ LL + Sbjct: 96 KFIITGEPGVGKTVLLSQ 113 >5LJA-A nrPDB Length = 231 Score = 28.6 bits (63), Expect = 2.3, Method: Composition-based stats. Identities = 7/18 (38%), Positives = 11/18 (61%) Query: 23 ILLIGDSGVGKSCLLVRF 40 + ++G SG GKS L+ Sbjct: 37 VAIVGASGSGKSTLMNIL 54 >6QUZ-A nrPDB Length = 587 Score = 28.2 bits (62), Expect = 2.4, Method: Composition-based stats. Identities = 10/49 (20%), Positives = 24/49 (48%), Gaps = 8/49 (16%) Query: 23 ILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKL 71 + ++G++G GKS L+ + G +++ +++ + VKL Sbjct: 372 VAVLGETGSGKSTLM-----NLIPRLIDPERG---RVEVDELDVRTVKL 412 >6HCM-k1 nrPDB Length = 599 Score = 28.2 bits (62), Expect = 2.4, Method: Composition-based stats. Identities = 8/53 (15%), Positives = 24/53 (45%), Gaps = 3/53 (5%) Query: 13 NGKSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPS--FITTIGIDFKIKTVD 63 G+ DS + ++++G++G GK+ + + + + +K + + Sbjct: 366 AGEFTDSEI-MVMLGENGTGKTTFIRMLAGRLKPDEGGEVPVLNVSYKPQKIS 417 >5T62-W nrPDB Length = 651 Score = 28.2 bits (62), Expect = 2.4, Method: Composition-based stats. Identities = 12/42 (28%), Positives = 19/42 (45%), Gaps = 1/42 (2%) Query: 25 LIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDING 66 L+G VGKS + V K S +T G +T+ ++ Sbjct: 341 LVGYPNVGKSSTINSLVGAKKV-SVSSTPGKTKHFQTIKLSD 381 >4YPN-A nrPDB Length = 293 Score = 28.2 bits (62), Expect = 2.4, Method: Composition-based stats. Identities = 7/14 (50%), Positives = 11/14 (78%) Query: 23 ILLIGDSGVGKSCL 36 ++L+G GVGK+ L Sbjct: 146 LVLVGPPGVGKTSL 159 >4YPL-A nrPDB Length = 555 Score = 28.2 bits (62), Expect = 2.4, Method: Composition-based stats. Identities = 7/14 (50%), Positives = 11/14 (78%) Query: 23 ILLIGDSGVGKSCL 36 ++L+G GVGK+ L Sbjct: 113 LVLVGPPGVGKTSL 126 >6MTD-v nrPDB Length = 839 Score = 28.2 bits (62), Expect = 2.5, Method: Composition-based stats. Identities = 16/72 (22%), Positives = 26/72 (36%), Gaps = 4/72 (5%) Query: 65 NGKKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHAND 124 +G + L D+ G F + TA R G ++V D + + E Sbjct: 75 DGAGFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCVSGVCVQTETVLRQAIAERIKP 134 Query: 125 EAQLLLVGNKSD 136 +L+ NK D Sbjct: 135 ----VLMMNKMD 142 >3EC2-A nrPDB Length = 180 Score = 28.2 bits (62), Expect = 2.7, Method: Composition-based stats. Identities = 13/54 (24%), Positives = 22/54 (40%), Gaps = 5/54 (9%) Query: 23 ILLIGDSGVGKS-----CLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKL 71 + +G GVGK+ L + + F T + F++K + GK K Sbjct: 41 LTFVGSPGVGKTHLAVATLKAIYEKKGIRGYFFDTKDLIFRLKHLMDEGKDTKF 94 >5OWV-A nrPDB Length = 732 Score = 28.2 bits (62), Expect = 2.7, Method: Composition-based stats. Identities = 12/57 (21%), Positives = 23/57 (40%), Gaps = 3/57 (5%) Query: 20 IMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDING-KKVKLQLWD 75 I + G GKS LL +++ F ++ I + + ++ K+ WD Sbjct: 162 EFNIAITGVMNAGKSSLLNALLKEDFLG--VSNIPETANLTVLSYGKSEEAKIYFWD 216 >5Z1X-A nrPDB Length = 495 Score = 28.2 bits (62), Expect = 2.8, Method: Composition-based stats. Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 1/37 (2%) Query: 70 KLQLWDTAGQERFRT-ITTAYYRGAMGIILVYDVTDE 105 Q+ D AG + + ++T Y G G +VYD TD Sbjct: 96 NFQVPDQAGTYWYHSHLSTQYCDGLRGAFVVYDPTDP 132 >4UUD-B nrPDB Length = 864 Score = 28.2 bits (62), Expect = 2.9, Method: Composition-based stats. Identities = 10/25 (40%), Positives = 13/25 (52%) Query: 23 ILLIGDSGVGKSCLLVRFVEDKFNP 47 I ++G GKS +L FV F P Sbjct: 34 IAVVGGQSAGKSSVLENFVGRDFLP 58 >3PV0-A nrPDB Length = 381 Score = 28.2 bits (62), Expect = 2.9, Method: Composition-based stats. Identities = 8/15 (53%), Positives = 11/15 (73%) Query: 23 ILLIGDSGVGKSCLL 37 ++ +G SG GKS LL Sbjct: 32 VVFVGPSGCGKSTLL 46 >3L43-A nrPDB Length = 319 Score = 28.2 bits (62), Expect = 2.9, Method: Composition-based stats. Identities = 10/25 (40%), Positives = 13/25 (52%) Query: 23 ILLIGDSGVGKSCLLVRFVEDKFNP 47 I ++G GKS +L FV F P Sbjct: 47 IAVVGGQSAGKSSVLENFVGRDFLP 71 >2X2E-A nrPDB Length = 353 Score = 28.2 bits (62), Expect = 2.9, Method: Composition-based stats. Identities = 10/25 (40%), Positives = 13/25 (52%) Query: 23 ILLIGDSGVGKSCLLVRFVEDKFNP 47 I ++G GKS +L FV F P Sbjct: 34 IAVVGGQSAGKSSVLENFVGRDFLP 58 >2AKA-B nrPDB Length = 299 Score = 28.2 bits (62), Expect = 2.9, Method: Composition-based stats. Identities = 10/25 (40%), Positives = 13/25 (52%) Query: 23 ILLIGDSGVGKSCLLVRFVEDKFNP 47 I ++G GKS +L FV F P Sbjct: 29 IAVVGGQSAGKSSVLENFVGRDFLP 53 >2CE7-A nrPDB Length = 476 Score = 28.2 bits (62), Expect = 2.9, Method: Composition-based stats. Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 1/48 (2%) Query: 23 ILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVK 70 ILL+G G GK+ LL R V + N F G DF V + +V+ Sbjct: 52 ILLVGPPGTGKT-LLARAVAGEANVPFFHISGSDFVELFVGVGAARVR 98 >5GKO-A nrPDB Length = 671 Score = 28.2 bits (62), Expect = 3.0, Method: Composition-based stats. Identities = 7/18 (38%), Positives = 11/18 (61%) Query: 23 ILLIGDSGVGKSCLLVRF 40 + ++G SG GKS L+ Sbjct: 46 VAIVGQSGSGKSTLMNIL 63 >2PX0-A nrPDB Length = 296 Score = 28.2 bits (62), Expect = 3.0, Method: Composition-based stats. Identities = 8/40 (20%), Positives = 13/40 (32%) Query: 23 ILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTV 62 I+L G +G GK+ L + I + Sbjct: 108 IVLFGSTGAGKTTTLAKLAAISMLEKHKKIAFITTDTYRI 147 >6MFU-A nrPDB Length = 225 Score = 27.9 bits (61), Expect = 3.2, Method: Composition-based stats. Identities = 12/33 (36%), Positives = 16/33 (48%), Gaps = 3/33 (9%) Query: 23 ILLIGDSGVGKSCLLVRFVE---DKFNPSFITT 52 +++ G SG GKS LL E + F S T Sbjct: 22 LVICGPSGTGKSTLLKTLFESQPNTFGFSVSHT 54 >2DBY-A nrPDB Length = 368 Score = 27.9 bits (61), Expect = 3.3, Method: Composition-based stats. Identities = 13/74 (17%), Positives = 26/74 (35%), Gaps = 19/74 (25%) Query: 25 LIGDSGVGKSCLLVRFVE-DKFNPSF-ITTIGIDFKIKTVDI-----------NGKKV-- 69 ++G VGKS L + ++ TI + + ++ G++V Sbjct: 6 IVGLPNVGKSTLFNALTRANALAANYPFATIDKNVGVVPLEDERLYALQRTFAKGERVPP 65 Query: 70 ----KLQLWDTAGQ 79 ++ D AG Sbjct: 66 VVPTHVEFVDIAGL 79 >3VQT-A nrPDB Length = 548 Score = 27.9 bits (61), Expect = 3.3, Method: Composition-based stats. Identities = 18/100 (18%), Positives = 30/100 (30%), Gaps = 7/100 (7%) Query: 54 GIDFKIKTVDINGKKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQ 113 GI + + + L DT G + F T ++V D ++ Sbjct: 85 GISVTTSVMQFPYRDRVVNLLDTPGHQDFSEDTYRVLTAVDSALVVIDAAKGVEAQT-RK 143 Query: 114 WFKTVNEHANDEAQLLLVGNKSD---METRVVTADQGEAL 150 A ++ NK D + V AD + L Sbjct: 144 LMDVCRMRA---TPVMTFVNKMDREALHPLDVMADIEQHL 180 >2W6D-A nrPDB Length = 695 Score = 27.9 bits (61), Expect = 3.3, Method: Composition-based stats. Identities = 9/31 (29%), Positives = 17/31 (54%) Query: 20 IMKILLIGDSGVGKSCLLVRFVEDKFNPSFI 50 + ++L++GD GKS L + + PS + Sbjct: 69 VFRLLVLGDMKRGKSTFLNALIGENLLPSDV 99 >5A3F-A nrPDB Length = 754 Score = 27.9 bits (61), Expect = 3.4, Method: Composition-based stats. Identities = 10/25 (40%), Positives = 13/25 (52%) Query: 23 ILLIGDSGVGKSCLLVRFVEDKFNP 47 I ++G GKS +L FV F P Sbjct: 34 IAVVGGQSAGKSSVLENFVGRDFLP 58 >2PCL-A nrPDB Length = 224 Score = 27.9 bits (61), Expect = 3.4, Method: Composition-based stats. Identities = 9/18 (50%), Positives = 11/18 (61%) Query: 23 ILLIGDSGVGKSCLLVRF 40 + +IG SG GKS LL Sbjct: 33 VSIIGASGSGKSTLLYIL 50 >6G2G-A nrPDB Length = 310 Score = 27.9 bits (61), Expect = 3.4, Method: Composition-based stats. Identities = 7/19 (36%), Positives = 11/19 (57%) Query: 23 ILLIGDSGVGKSCLLVRFV 41 ++L G GVGKS + + Sbjct: 11 LVLSGKGGVGKSSVTTQLA 29 >3KW7-A nrPDB Length = 502 Score = 27.9 bits (61), Expect = 3.4, Method: Composition-based stats. Identities = 23/102 (22%), Positives = 40/102 (39%), Gaps = 24/102 (23%) Query: 71 LQLWDTAGQERFRT-ITTAYYRGAMGIILVYD----------VTDERTFTNIKQWF---K 116 + D AG + + ++T Y G G ++VYD V D+ T + W+ Sbjct: 97 FTVPDQAGTFWYHSHLSTQYCDGLRGPLVVYDPSDPYASMYDVDDDTTVITLSDWYHTAA 156 Query: 117 TVNEHANDEAQLLLV--------GNKSDMETRVVTADQGEAL 150 + A +L+ GN SD+ V+T +Q + Sbjct: 157 KLGPAFPPNADSVLINGLGRFAGGNASDL--AVITVEQNKRY 196 >6DLV-b nrPDB Length = 748 Score = 27.9 bits (61), Expect = 3.5, Method: Composition-based stats. Identities = 10/25 (40%), Positives = 13/25 (52%) Query: 23 ILLIGDSGVGKSCLLVRFVEDKFNP 47 I ++G GKS +L FV F P Sbjct: 34 IAVVGGQSAGKSSVLENFVGRDFLP 58 >4XD7-D nrPDB Length = 483 Score = 27.9 bits (61), Expect = 3.6, Method: Composition-based stats. Identities = 10/40 (25%), Positives = 18/40 (45%) Query: 22 KILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKT 61 KI L G +GVGK+ L+ + + ++ +T Sbjct: 163 KIGLFGGAGVGKTVLIQELIHNIAQEHGGISVFAGVGERT 202 >4XGC-D nrPDB Length = 459 Score = 27.9 bits (61), Expect = 3.6, Method: Composition-based stats. Identities = 8/26 (30%), Positives = 13/26 (50%) Query: 23 ILLIGDSGVGKSCLLVRFVEDKFNPS 48 +LL+G G GK+ L+ + D Sbjct: 52 LLLLGPRGSGKTTLINSVLADLLPNK 77 >4Q7K-A nrPDB Length = 250 Score = 27.9 bits (61), Expect = 3.6, Method: Composition-based stats. Identities = 10/49 (20%), Positives = 24/49 (48%), Gaps = 8/49 (16%) Query: 23 ILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKL 71 + ++G++G GKS L+ + G +++ +++ + VKL Sbjct: 34 VAVLGETGSGKSTLM-----NLIPRLIDPERG---RVEVDELDVRTVKL 74 >4XGC-E nrPDB Length = 460 Score = 27.9 bits (61), Expect = 3.7, Method: Composition-based stats. Identities = 23/125 (18%), Positives = 46/125 (36%), Gaps = 19/125 (15%) Query: 23 ILLIGDSGVGKSCLLVRFVEDKFN------------PSFITTIGIDFKIKTVDIN-GKKV 69 I L G SG GK+ L F+++ + T I ++ + ++ + G + Sbjct: 37 IYLFGHSGTGKTALTRAFLKECGKRQNVRTAHLNAIECYTTKIMLEILLDSLAPDQGDAL 96 Query: 70 KL-QLWDTAGQERFRTITTAYYRGAMGIILVYDVTD--ERTFTNIKQWFKTVNEHANDEA 126 K+ + D Q R + T G ++ D + N+ + E N Sbjct: 97 KVDNMLDFVEQLRRQAATRV---EDQGFLIAVDNAERLRDMDANVLPVLLRLQELTNLNL 153 Query: 127 QLLLV 131 ++L+ Sbjct: 154 CVILL 158 >5LKM-A nrPDB Length = 452 Score = 27.9 bits (61), Expect = 3.8, Method: Composition-based stats. Identities = 9/17 (52%), Positives = 14/17 (82%) Query: 23 ILLIGDSGVGKSCLLVR 39 +L+ GD G+GKS LL++ Sbjct: 91 VLIGGDPGIGKSTLLLQ 107 >4HUQ-A nrPDB Length = 290 Score = 27.9 bits (61), Expect = 3.9, Method: Composition-based stats. Identities = 12/48 (25%), Positives = 20/48 (41%), Gaps = 11/48 (22%) Query: 23 ILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVK 70 + +IG +G GKS L+ + N T G T+ I+ + Sbjct: 36 LAIIGHTGSGKSTLIQQL-----NALLKPTSG------TIKIDEFTIT 72 >6H7G-A nrPDB Length = 346 Score = 27.9 bits (61), Expect = 4.0, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 21/51 (41%), Gaps = 4/51 (7%) Query: 22 KILLIG---DSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKV 69 K ++IG DSG GKS + R + F G + T+ + V Sbjct: 6 KTVVIGLAADSGCGKSTFMRR-MTSIFGGVPKPPAGGNPDSNTLISDMTTV 55 >5CA8-A nrPDB Length = 692 Score = 27.9 bits (61), Expect = 4.0, Method: Composition-based stats. Identities = 9/24 (37%), Positives = 11/24 (45%) Query: 23 ILLIGDSGVGKSCLLVRFVEDKFN 46 I + G GKS LL R F+ Sbjct: 61 ISVFGSQSTGKSTLLNRLFNTNFD 84 >5DO7-A nrPDB Length = 666 Score = 27.5 bits (60), Expect = 4.1, Method: Composition-based stats. Identities = 7/15 (46%), Positives = 11/15 (73%) Query: 23 ILLIGDSGVGKSCLL 37 + ++G SG GK+ LL Sbjct: 82 MCILGSSGSGKTTLL 96 >4ZIR-B nrPDB Length = 268 Score = 27.5 bits (60), Expect = 4.1, Method: Composition-based stats. Identities = 6/19 (31%), Positives = 11/19 (57%) Query: 24 LLIGDSGVGKSCLLVRFVE 42 +++G +G GK+ LL Sbjct: 41 VVVGKNGSGKTTLLKILAG 59 >1WDT-A nrPDB Length = 665 Score = 27.5 bits (60), Expect = 4.1, Method: Composition-based stats. Identities = 6/22 (27%), Positives = 11/22 (50%) Query: 23 ILLIGDSGVGKSCLLVRFVEDK 44 + L+G +G GK+ L + Sbjct: 12 VALVGHAGSGKTTLTEALLYKT 33 >4DBL-C nrPDB Length = 249 Score = 27.5 bits (60), Expect = 4.4, Method: Composition-based stats. Identities = 9/17 (52%), Positives = 12/17 (70%) Query: 23 ILLIGDSGVGKSCLLVR 39 + L+G +G GKS LL R Sbjct: 29 LHLVGPNGAGKSTLLAR 45 >4HZI-A nrPDB Length = 294 Score = 27.5 bits (60), Expect = 4.5, Method: Composition-based stats. Identities = 7/16 (43%), Positives = 11/16 (68%) Query: 23 ILLIGDSGVGKSCLLV 38 +L+G +G GKS L+ Sbjct: 63 CVLLGRNGAGKSTLVN 78 >4LG0-A nrPDB Length = 133 Score = 27.5 bits (60), Expect = 4.5, Method: Composition-based stats. Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 3/51 (5%) Query: 157 PFIESSAKNDDNVNEIFFTLAKLI---QEKIDSNKLVGVGNGKEGNISINS 204 IESSA+ +++I+ + K + ++K DSN G N N+S++S Sbjct: 34 KAIESSAEKRLTLSQIYEWMVKSVPYFKDKGDSNSSAGWKNSIRHNLSLHS 84 >6BZR-B nrPDB Length = 251 Score = 27.5 bits (60), Expect = 4.7, Method: Composition-based stats. Identities = 7/16 (43%), Positives = 11/16 (68%) Query: 22 KILLIGDSGVGKSCLL 37 K+ ++G +G GKS L Sbjct: 42 KVGIVGRTGAGKSSLA 57 >3D0O-A nrPDB Length = 317 Score = 27.5 bits (60), Expect = 4.7, Method: Composition-based stats. Identities = 12/54 (22%), Positives = 22/54 (40%), Gaps = 11/54 (20%) Query: 22 KILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWD 75 K++LIG+ VG S V + +D++ +KV+ + D Sbjct: 8 KVVLIGNGAVG-SSYAFSLVNQSIVDELV----------IIDLDTEKVRGDVMD 50 >1R5O-A nrPDB Length = 467 Score = 27.5 bits (60), Expect = 4.7, Method: Composition-based stats. Identities = 10/58 (17%), Positives = 22/58 (37%), Gaps = 14/58 (24%) Query: 128 LLLVGNKSDMETRVVTADQGEALAKELG--------------IPFIESSAKNDDNVNE 171 L++V NK D + + ++ + +L + ++ SA NV + Sbjct: 184 LVVVINKMDEPSVQWSEERYKECVDKLSMFLRRVAGYNSKTDVKYMPVSAYTGQNVKD 241 >3EPJ-A nrPDB Length = 409 Score = 27.5 bits (60), Expect = 4.9, Method: Composition-based stats. Identities = 12/28 (42%), Positives = 18/28 (64%), Gaps = 1/28 (3%) Query: 23 ILLIGDSGVGKSCLLVRFVEDKFNPSFI 50 I++ G +GVGKS L ++ + KFN I Sbjct: 5 IVIAGTTGVGKSQLSIQLAQ-KFNGEVI 31 >3NHB-A nrPDB Length = 306 Score = 27.5 bits (60), Expect = 4.9, Method: Composition-based stats. Identities = 11/21 (52%), Positives = 13/21 (61%), Gaps = 3/21 (14%) Query: 23 ILLIGDSGVGKSC---LLVRF 40 + L+G SG GKS LL RF Sbjct: 83 LALVGPSGAGKSTILRLLFRF 103 >6DJQ-A nrPDB Length = 391 Score = 27.5 bits (60), Expect = 5.0, Method: Composition-based stats. Identities = 9/25 (36%), Positives = 13/25 (52%) Query: 23 ILLIGDSGVGKSCLLVRFVEDKFNP 47 I+++G GKS +L V F P Sbjct: 48 IVVVGSQSSGKSSVLENIVGRDFLP 72 >5D0U-A nrPDB Length = 714 Score = 27.5 bits (60), Expect = 5.1, Method: Composition-based stats. Identities = 5/19 (26%), Positives = 14/19 (73%) Query: 23 ILLIGDSGVGKSCLLVRFV 41 ++ +G++G GK+ + ++V Sbjct: 57 LVFVGETGSGKTTQIPQYV 75 >6E11-1 nrPDB Length = 906 Score = 27.1 bits (59), Expect = 5.4, Method: Composition-based stats. Identities = 11/44 (25%), Positives = 20/44 (45%), Gaps = 6/44 (13%) Query: 24 LLIGDSGVGKSC----LLVRFVEDKFNPSFI--TTIGIDFKIKT 61 +L+G+ G GK+ L+ R + T I ++F+ T Sbjct: 232 VLVGNPGTGKTTIVEGLVYRIEKGDVPKELQGYTVISLNFRKFT 275 >5IK2-D nrPDB Length = 462 Score = 27.1 bits (59), Expect = 5.5, Method: Composition-based stats. Identities = 10/40 (25%), Positives = 18/40 (45%) Query: 22 KILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKT 61 KI L G +GVGK+ L+ + + ++ +T Sbjct: 146 KIGLFGGAGVGKTVLIQELINNVAQEHGGLSVFAGVGERT 185 >5GM6-Y nrPDB Length = 876 Score = 27.1 bits (59), Expect = 5.5, Method: Composition-based stats. Identities = 9/27 (33%), Positives = 18/27 (66%), Gaps = 1/27 (3%) Query: 23 ILLIGDSGVGKSCLLVRF-VEDKFNPS 48 ++++G++G GK+ L ++ VED F Sbjct: 242 LIIMGETGSGKTTQLPQYLVEDGFTDQ 268 >5AJ2-A nrPDB Length = 355 Score = 27.1 bits (59), Expect = 5.5, Method: Composition-based stats. Identities = 10/19 (52%), Positives = 12/19 (63%) Query: 23 ILLIGDSGVGKSCLLVRFV 41 L+ G+SG GKS LL R Sbjct: 165 CLIEGESGKGKSTLLQRIA 183 >4R7Z-A nrPDB Length = 338 Score = 27.1 bits (59), Expect = 5.8, Method: Composition-based stats. Identities = 11/23 (47%), Positives = 17/23 (73%), Gaps = 1/23 (4%) Query: 21 MKILLIGDSGVGKSCLLVRFVED 43 + +LL+GD GV KS +L R+V + Sbjct: 61 IHVLLVGDPGVAKSQIL-RYVAN 82 >2ZBL-A nrPDB Length = 421 Score = 27.1 bits (59), Expect = 5.9, Method: Composition-based stats. Identities = 13/51 (25%), Positives = 20/51 (39%), Gaps = 1/51 (1%) Query: 54 GIDFKIKTVDINGKKVKLQLWDTA-GQERFRTITTAYYRGAMGIILVYDVT 103 I+ K +++ L+ WD A Q A ++VYDVT Sbjct: 138 TIEVIEKYFWSEEEQMCLESWDEAFSQTEDYRGGNANMHAVEAFLIVYDVT 188 >6CY1-A nrPDB Length = 329 Score = 27.1 bits (59), Expect = 5.9, Method: Composition-based stats. Identities = 9/52 (17%), Positives = 23/52 (44%), Gaps = 4/52 (7%) Query: 23 ILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLW 74 I+++G +GVGK+ + + + +G + ++ +L +W Sbjct: 126 IMVVGVNGVGKTTTIGKLAHQFKSEGLKVVLGAADTFRAAAVD----QLVIW 173 >5DGX-A nrPDB Length = 256 Score = 27.1 bits (59), Expect = 6.3, Method: Composition-based stats. Identities = 11/44 (25%), Positives = 20/44 (45%), Gaps = 5/44 (11%) Query: 23 ILLIGDSGVGKSCL---LVRFVEDKFNPSFITTIGIDFKIKTVD 63 + +G SG GK+ L + RF + G+D + T++ Sbjct: 47 VAFVGKSGSGKTTLTSIISRFYTQHEGEILLD--GVDTRELTLE 88 >4R7Y-A nrPDB Length = 613 Score = 27.1 bits (59), Expect = 6.5, Method: Composition-based stats. Identities = 11/23 (47%), Positives = 17/23 (73%), Gaps = 1/23 (4%) Query: 21 MKILLIGDSGVGKSCLLVRFVED 43 + +LL+GD GV KS +L R+V + Sbjct: 336 IHVLLVGDPGVAKSQIL-RYVAN 357 >5DUI-A nrPDB Length = 111 Score = 27.1 bits (59), Expect = 6.7, Method: Composition-based stats. Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 3/51 (5%) Query: 157 PFIESSAKNDDNVNEIFFTLAKLI---QEKIDSNKLVGVGNGKEGNISINS 204 IESSA+ +++I+ + K + ++K DSN G N N+S++S Sbjct: 23 KAIESSAEKRLTLSQIYEWMVKSVPYFKDKGDSNSSAGWKNSIRHNLSLHS 73 >4QIW-C nrPDB Length = 391 Score = 27.1 bits (59), Expect = 6.7, Method: Composition-based stats. Identities = 14/55 (25%), Positives = 25/55 (45%), Gaps = 10/55 (18%) Query: 27 GDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDING----KKVKLQLWDTA 77 G SGVGK+ + + + I T G +FK + + + G + +W+ A Sbjct: 225 GLSGVGKT-----IIRKEGDEYVIYTEGSNFK-QVLKVPGVDPTRTRTNNIWEIA 273 >5AVO-A nrPDB Length = 304 Score = 26.7 bits (58), Expect = 7.0, Method: Composition-based stats. Identities = 12/48 (25%), Positives = 18/48 (37%), Gaps = 1/48 (2%) Query: 21 MKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKK 68 MK+LL G VGK E + IG + + + K+ Sbjct: 1 MKLLLFGYGNVGK-AFRKLLHEKRSPELNDVIIGGIVTRRGIMLQDKE 47 >4O0M-A nrPDB Length = 524 Score = 26.7 bits (58), Expect = 7.2, Method: Composition-based stats. Identities = 12/48 (25%), Positives = 20/48 (41%) Query: 24 LLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKL 71 L+ G SG GK+ V+F+ + I + F+ DI + Sbjct: 44 LVSGTSGTGKTLFAVQFLYNGITIFNEPGIFVTFEESPQDIIKNALSF 91 >2JAQ-A nrPDB Length = 205 Score = 26.7 bits (58), Expect = 7.4, Method: Composition-based stats. Identities = 11/53 (20%), Positives = 20/53 (37%) Query: 21 MKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQL 73 MKI + G G GKS + + F + + + + KK ++ Sbjct: 1 MKIAIFGTVGAGKSTISAEISKKLGYEIFKEPVEENPYFEQYYKDLKKTVFKM 53 >5JWO-A nrPDB Length = 247 Score = 26.7 bits (58), Expect = 7.9, Method: Composition-based stats. Identities = 12/48 (25%), Positives = 20/48 (41%) Query: 24 LLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKL 71 L+ G SG GK+ V+F+ + I + F+ DI + Sbjct: 36 LVSGTSGTGKTLFAVQFLYNGITIFNEPGIFVTFEESPQDIIKNALSF 83 >1EZ4-A nrPDB Length = 318 Score = 26.7 bits (58), Expect = 8.7, Method: Composition-based stats. Identities = 8/28 (28%), Positives = 16/28 (57%), Gaps = 3/28 (10%) Query: 22 KILLIGDSGVGKS---CLLVRFVEDKFN 46 K++L+GD VG S + + + ++F Sbjct: 7 KVVLVGDGAVGSSYAFAMAQQGIAEEFV 34 >5ANB-A nrPDB Length = 398 Score = 26.3 bits (57), Expect = 9.3, Method: Composition-based stats. Identities = 7/32 (21%), Positives = 19/32 (59%) Query: 140 RVVTADQGEALAKELGIPFIESSAKNDDNVNE 171 + +T G A +++ + FI++S+K +++ Sbjct: 348 KSITTQTGRAALEKITLKFIDTSSKFGHGLHQ 379 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.311 0.159 0.457 Lambda K H 0.267 0.0490 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 8,776,645 Number of Sequences: 36641 Number of extensions: 385804 Number of successful extensions: 2869 Number of sequences better than 10.0: 477 Number of HSP's better than 10.0 without gapping: 543 Number of HSP's successfully gapped in prelim test: 141 Number of HSP's that attempted gapping in prelim test: 1600 Number of HSP's gapped (non-prelim): 765 length of query: 215 length of database: 10,336,785 effective HSP length: 93 effective length of query: 122 effective length of database: 6,929,172 effective search space: 845358984 effective search space used: 845358984 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.5 bits) S2: 58 (26.7 bits)