BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= P07347 (238 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 4HNX-B nrPDB 494 e-140 6C9M-B nrPDB 168 2e-42 5C88-A nrPDB 73 1e-13 2PSW-A nrPDB 51 5e-07 5K04-B nrPDB 45 2e-05 4PV6-C nrPDB 39 0.003 4V0N-B nrPDB 30 0.84 5US1-A nrPDB 29 1.4 4EVY-A nrPDB 29 2.0 3JVN-A nrPDB 27 6.2 2LR8-A nrPDB 27 7.3 >4HNX-B nrPDB Length = 248 Score = 494 bits (1271), Expect = e-140, Method: Compositional matrix adjust. Identities = 238/238 (100%), Positives = 238/238 (100%) Query: 1 MPINIRRATINDIICMQNANLHNLPENYMMKYYMYHILSWPEASFVATTTTLDCEDSDEQ 60 MPINIRRATINDIICMQNANLHNLPENYMMKYYMYHILSWPEASFVATTTTLDCEDSDEQ Sbjct: 1 MPINIRRATINDIICMQNANLHNLPENYMMKYYMYHILSWPEASFVATTTTLDCEDSDEQ 60 Query: 61 DENDKLELTLDGTNDGRTIKLDPTYLAPGEKLVGYVLVKMNDDPDQQNEPPNGHITSLSV 120 DENDKLELTLDGTNDGRTIKLDPTYLAPGEKLVGYVLVKMNDDPDQQNEPPNGHITSLSV Sbjct: 61 DENDKLELTLDGTNDGRTIKLDPTYLAPGEKLVGYVLVKMNDDPDQQNEPPNGHITSLSV 120 Query: 121 MRTYRRMGIAENLMRQALFALREVHQAEYVSLHVRQSNRAALHLYRDTLAFEVLSIEKSY 180 MRTYRRMGIAENLMRQALFALREVHQAEYVSLHVRQSNRAALHLYRDTLAFEVLSIEKSY Sbjct: 121 MRTYRRMGIAENLMRQALFALREVHQAEYVSLHVRQSNRAALHLYRDTLAFEVLSIEKSY 180 Query: 181 YQDGEDAYAMKKVLKLEELQISNFTHRRLKENEEKLEDDLESDLLEDIIKQGVNDIIV 238 YQDGEDAYAMKKVLKLEELQISNFTHRRLKENEEKLEDDLESDLLEDIIKQGVNDIIV Sbjct: 181 YQDGEDAYAMKKVLKLEELQISNFTHRRLKENEEKLEDDLESDLLEDIIKQGVNDIIV 238 >6C9M-B nrPDB Length = 236 Score = 168 bits (426), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 92/192 (47%), Positives = 118/192 (61%), Gaps = 41/192 (21%) Query: 3 INIRRATINDIICMQNANLHNLPENYMMKYYMYHILSWPEASFVATTTTLDCEDSDEQDE 62 +NIR A D++ MQ+ NL LPENY MKYY YH LSWP+ S++A +DE Sbjct: 2 MNIRNARPEDLMNMQHCNLLCLPENYQMKYYFYHGLSWPQLSYIA------------EDE 49 Query: 63 NDKLELTLDGTNDGRTIKLDPTYLAPGEKLVGYVLVKMNDDPDQQNEPPNGHITSLSVMR 122 N K+VGYVL KM +DPD + P+GHITSL+V R Sbjct: 50 NG--------------------------KIVGYVLAKMEEDPD---DVPHGHITSLAVKR 80 Query: 123 TYRRMGIAENLMRQALFALREVHQAEYVSLHVRQSNRAALHLYRDTLAFEVLSIEKSYYQ 182 ++RR+G+A+ LM QA A+ E A+YVSLHVR+SNRAALHLY +TL F++ +E YY Sbjct: 81 SHRRLGLAQKLMDQASRAMIENFNAKYVSLHVRKSNRAALHLYSNTLNFQISEVEPKYYA 140 Query: 183 DGEDAYAMKKVL 194 DGEDAYAMK+ L Sbjct: 141 DGEDAYAMKRDL 152 >5C88-A nrPDB Length = 173 Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 53/196 (27%), Positives = 87/196 (44%), Gaps = 44/196 (22%) Query: 3 INIRRATINDIICMQNANLHNLPENYMMKYYMYHILSWPEASFVATTTTLDCEDSDEQDE 62 +R A ++DI + N LPENY +++ H+ + A FVA Sbjct: 12 FTLRNARMDDIDQIIKINRLTLPENYPYYFFVEHLKEYGLAFFVAIVDN----------- 60 Query: 63 NDKLELTLDGTNDGRTIKLDPTYLAPGEKLVGYVLVKMNDDPDQQNEPPN----GHITSL 118 +VGY++ ++ + P+ GH+ S+ Sbjct: 61 ----------------------------SVVGYIMPRIEWGFSNIKQLPSLVRKGHVVSI 92 Query: 119 SVMRTYRRMGIAENLMRQALFALREVHQAEYVSLHVRQSNRAALHLYRDTLAFEVLSIEK 178 +V+ YRR GIA L+ ++ +++ + AE + L VR SN A+ LY + L F+ + + K Sbjct: 93 AVLEEYRRKGIATTLLEASMKSMKNDYNAEEIYLEVRVSNYPAIALY-EKLNFKKVKVLK 151 Query: 179 SYYQDGEDAYAMKKVL 194 YY DGEDAY M + L Sbjct: 152 GYYADGEDAYLMARPL 167 >2PSW-A nrPDB Length = 170 Score = 50.8 bits (120), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 32/110 (29%), Positives = 58/110 (52%), Gaps = 7/110 (6%) Query: 93 VGYVLVKMNDDPDQQNEPPNGHITSLSVMRTYRRMGIAENLMRQALFALREVHQAEYVSL 152 VG V +++ +Q+ +I +L + YRR+GI ++ L + + + L Sbjct: 57 VGAVCCRVDHSQNQKRL----YIMTLGCLAPYRRLGIGTKMLNHVLNICEKDGTFDNIYL 112 Query: 153 HVRQSNRAALHLYRDTLAFEVLSIEKSYYQDGE--DAYAMKKVLKLEELQ 200 HV+ SN +A+ YR FE++ +K+YY+ E DA+ ++K LK+ Q Sbjct: 113 HVQISNESAIDFYR-KFGFEIIETKKNYYKRIEPADAHVLQKNLKVPSGQ 161 >5K04-B nrPDB Length = 170 Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 43/202 (21%), Positives = 80/202 (39%), Gaps = 52/202 (25%) Query: 4 NIRRATINDIICMQNANLHNLPENYMMKYYMYHILSWPEASFVATTTTLDCEDSDEQDEN 63 +I+ + D+ + NL L EN+ + +Y +++ WP+ + + T Sbjct: 3 SIKPFQMEDLFELNPVNLDPLTENFNVSFYSQYLIEWPQLFYKSVET------------- 49 Query: 64 DKLELTLDGTNDGRTIKLDPTYLAPGEKLVGYVLVKMNDDPDQQNEPPNGHITSLSVMRT 123 P + GY++ K ++ + HIT+++V+ Sbjct: 50 ------------------------PNGQASGYMMAKTEGQLSKKEW--HTHITAVTVLDQ 83 Query: 124 YRRMGIAENLMRQALFALREVHQAEYVSLHVRQSNRAALHLYRDTLAFEVLSIEKSYY-- 181 YRR+G+A L + L L +V ++ L V+ +N LY + L + V YY Sbjct: 84 YRRIGLASKLCLE-LENLTQVKDTLFIDLFVKVTNTLGRILY-EKLGYSVFRRVVGYYGR 141 Query: 182 ---------QDGEDAYAMKKVL 194 D DA+ M+K+L Sbjct: 142 EIQKDRNKIDDSVDAFDMRKLL 163 >4PV6-C nrPDB Length = 162 Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust. Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 2/71 (2%) Query: 124 YRRMGIAENLMRQALFALREVHQAEYVSLHVRQSNRAALHLYRDTLAFEVLSIEKSYYQD 183 +RRMG+ LM L RE + V L VR N A+ Y+ F + ++ +YY D Sbjct: 86 FRRMGVGSALMDAFLSLCREQNMLS-VRLEVRTDNDEAIRFYKK-YGFVITAMLPNYYSD 143 Query: 184 GEDAYAMKKVL 194 +AY M +++ Sbjct: 144 SSNAYTMWRIV 154 >4V0N-B nrPDB Length = 425 Score = 30.0 bits (66), Expect = 0.84, Method: Compositional matrix adjust. Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 3/56 (5%) Query: 34 MYHILSWPEASFVATTTTLDCEDSDEQ--DENDKLELTLDGTNDGRTIKLDPTYLA 87 M + W VATT + C D +Q DE D + + GT GR + L+P A Sbjct: 199 MAFVEHWQGQPLVATTV-ITCMDVVKQAIDEPDAVSCLVVGTESGRILILNPAGTA 253 >5US1-A nrPDB Length = 189 Score = 29.3 bits (64), Expect = 1.4, Method: Compositional matrix adjust. Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 2/48 (4%) Query: 90 EKLVGYVLVKMNDDPDQQNEPPN-GHITSLSVMRTYRRMGIAENLMRQ 136 +KLVG+V + + N P + G++ ++ V ++YRR GI LM Q Sbjct: 64 QKLVGHVAI-IQRHMALDNTPISVGYVEAMVVEQSYRRQGIGRQLMLQ 110 >4EVY-A nrPDB Length = 166 Score = 28.9 bits (63), Expect = 2.0, Method: Compositional matrix adjust. Identities = 13/41 (31%), Positives = 22/41 (53%) Query: 111 PNGHITSLSVMRTYRRMGIAENLMRQALFALREVHQAEYVS 151 P G + + V+ +RR G+A L+RQA ++ E+ S Sbjct: 94 PVGFLEGIYVLPAHRRSGVATMLIRQAEVWAKQFSCTEFAS 134 >3JVN-A nrPDB Length = 166 Score = 27.3 bits (59), Expect = 6.2, Method: Compositional matrix adjust. Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 1/51 (1%) Query: 115 ITSLSVMRTYRRMGIAENLMRQALFALREVHQAEYVSLHVRQSNRAALHLY 165 I L + + YRR G+AE LM + L++ E + + V N+ AL Y Sbjct: 91 IDELYIEKEYRREGVAEQLMMRIEQELKDYGVKE-IFVEVWDFNKGALEFY 140 >2LR8-A nrPDB Length = 70 Score = 26.9 bits (58), Expect = 7.3, Method: Composition-based stats. Identities = 12/36 (33%), Positives = 19/36 (52%) Query: 74 NDGRTIKLDPTYLAPGEKLVGYVLVKMNDDPDQQNE 109 ND R I L+ P K Y+ K++ +P+Q +E Sbjct: 20 NDDRVILLECQKRGPSSKTFAYLAAKLDKNPNQVSE 55 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 4HNX-B nrPDB 346 6e-96 6C9M-B nrPDB 203 4e-53 5C88-A nrPDB 182 1e-46 5K04-B nrPDB 166 9e-42 2PSW-A nrPDB 139 1e-33 Sequences not found previously or not previously below threshold: 4PV6-C nrPDB 68 3e-12 5ISV-A nrPDB 53 2e-07 2CNT-A nrPDB 48 5e-06 5HGZ-A nrPDB 44 6e-05 1TIQ-A nrPDB 43 8e-05 3PP9-A nrPDB 39 0.002 3JVN-A nrPDB 36 0.013 6HD5-v nrPDB 35 0.036 4U9V-B nrPDB 35 0.044 4MI4-A nrPDB 34 0.070 1Y9K-A nrPDB 34 0.071 4NCZ-A nrPDB 34 0.079 5US1-A nrPDB 33 0.10 4R9M-A nrPDB 33 0.11 6CY6-A nrPDB 33 0.12 3FIX-A nrPDB 33 0.14 3K9U-A nrPDB 33 0.17 3EC4-A nrPDB 32 0.18 4EVY-A nrPDB 30 0.76 3OWC-A nrPDB 29 1.3 1UFH-A nrPDB 29 2.0 1ON0-A nrPDB 29 2.1 3TTH-A nrPDB 29 2.5 4OGD-A nrPDB 28 4.7 2VRN-A nrPDB 28 5.5 3CPF-A nrPDB 27 6.3 4RI1-A nrPDB 27 6.9 >4HNX-B nrPDB Length = 248 Score = 346 bits (886), Expect = 6e-96, Method: Composition-based stats. Identities = 238/238 (100%), Positives = 238/238 (100%) Query: 1 MPINIRRATINDIICMQNANLHNLPENYMMKYYMYHILSWPEASFVATTTTLDCEDSDEQ 60 MPINIRRATINDIICMQNANLHNLPENYMMKYYMYHILSWPEASFVATTTTLDCEDSDEQ Sbjct: 1 MPINIRRATINDIICMQNANLHNLPENYMMKYYMYHILSWPEASFVATTTTLDCEDSDEQ 60 Query: 61 DENDKLELTLDGTNDGRTIKLDPTYLAPGEKLVGYVLVKMNDDPDQQNEPPNGHITSLSV 120 DENDKLELTLDGTNDGRTIKLDPTYLAPGEKLVGYVLVKMNDDPDQQNEPPNGHITSLSV Sbjct: 61 DENDKLELTLDGTNDGRTIKLDPTYLAPGEKLVGYVLVKMNDDPDQQNEPPNGHITSLSV 120 Query: 121 MRTYRRMGIAENLMRQALFALREVHQAEYVSLHVRQSNRAALHLYRDTLAFEVLSIEKSY 180 MRTYRRMGIAENLMRQALFALREVHQAEYVSLHVRQSNRAALHLYRDTLAFEVLSIEKSY Sbjct: 121 MRTYRRMGIAENLMRQALFALREVHQAEYVSLHVRQSNRAALHLYRDTLAFEVLSIEKSY 180 Query: 181 YQDGEDAYAMKKVLKLEELQISNFTHRRLKENEEKLEDDLESDLLEDIIKQGVNDIIV 238 YQDGEDAYAMKKVLKLEELQISNFTHRRLKENEEKLEDDLESDLLEDIIKQGVNDIIV Sbjct: 181 YQDGEDAYAMKKVLKLEELQISNFTHRRLKENEEKLEDDLESDLLEDIIKQGVNDIIV 238 >6C9M-B nrPDB Length = 236 Score = 203 bits (517), Expect = 4e-53, Method: Composition-based stats. Identities = 96/212 (45%), Positives = 127/212 (59%), Gaps = 45/212 (21%) Query: 3 INIRRATINDIICMQNANLHNLPENYMMKYYMYHILSWPEASFVATTTTLDCEDSDEQDE 62 +NIR A D++ MQ+ NL LPENY MKYY YH LSWP+ S++A +DE Sbjct: 2 MNIRNARPEDLMNMQHCNLLCLPENYQMKYYFYHGLSWPQLSYIA------------EDE 49 Query: 63 NDKLELTLDGTNDGRTIKLDPTYLAPGEKLVGYVLVKMNDDPDQQNEPPNGHITSLSVMR 122 N K+VGYVL KM +DPD + P+GHITSL+V R Sbjct: 50 N--------------------------GKIVGYVLAKMEEDPD---DVPHGHITSLAVKR 80 Query: 123 TYRRMGIAENLMRQALFALREVHQAEYVSLHVRQSNRAALHLYRDTLAFEVLSIEKSYYQ 182 ++RR+G+A+ LM QA A+ E A+YVSLHVR+SNRAALHLY +TL F++ +E YY Sbjct: 81 SHRRLGLAQKLMDQASRAMIENFNAKYVSLHVRKSNRAALHLYSNTLNFQISEVEPKYYA 140 Query: 183 DGEDAYAMKKVLKLEELQISNFTHRRLKENEE 214 DGEDAYAMK+ L Q+++ R L+ E+ Sbjct: 141 DGEDAYAMKRDLT----QMADELRRHLELKEK 168 >5C88-A nrPDB Length = 173 Score = 182 bits (461), Expect = 1e-46, Method: Composition-based stats. Identities = 53/196 (27%), Positives = 87/196 (44%), Gaps = 44/196 (22%) Query: 3 INIRRATINDIICMQNANLHNLPENYMMKYYMYHILSWPEASFVATTTTLDCEDSDEQDE 62 +R A ++DI + N LPENY +++ H+ + A FVA Sbjct: 12 FTLRNARMDDIDQIIKINRLTLPENYPYYFFVEHLKEYGLAFFVAIVDN----------- 60 Query: 63 NDKLELTLDGTNDGRTIKLDPTYLAPGEKLVGYVLVKMNDDPDQQNEPPN----GHITSL 118 +VGY++ ++ + P+ GH+ S+ Sbjct: 61 ----------------------------SVVGYIMPRIEWGFSNIKQLPSLVRKGHVVSI 92 Query: 119 SVMRTYRRMGIAENLMRQALFALREVHQAEYVSLHVRQSNRAALHLYRDTLAFEVLSIEK 178 +V+ YRR GIA L+ ++ +++ + AE + L VR SN A+ LY + L F+ + + K Sbjct: 93 AVLEEYRRKGIATTLLEASMKSMKNDYNAEEIYLEVRVSNYPAIALY-EKLNFKKVKVLK 151 Query: 179 SYYQDGEDAYAMKKVL 194 YY DGEDAY M + L Sbjct: 152 GYYADGEDAYLMARPL 167 >5K04-B nrPDB Length = 170 Score = 166 bits (419), Expect = 9e-42, Method: Composition-based stats. Identities = 43/202 (21%), Positives = 80/202 (39%), Gaps = 52/202 (25%) Query: 4 NIRRATINDIICMQNANLHNLPENYMMKYYMYHILSWPEASFVATTTTLDCEDSDEQDEN 63 +I+ + D+ + NL L EN+ + +Y +++ WP+ + + T Sbjct: 3 SIKPFQMEDLFELNPVNLDPLTENFNVSFYSQYLIEWPQLFYKSVET------------- 49 Query: 64 DKLELTLDGTNDGRTIKLDPTYLAPGEKLVGYVLVKMNDDPDQQNEPPNGHITSLSVMRT 123 P + GY++ K ++ + HIT+++V+ Sbjct: 50 ------------------------PNGQASGYMMAKTEGQLSKKEW--HTHITAVTVLDQ 83 Query: 124 YRRMGIAENLMRQALFALREVHQAEYVSLHVRQSNRAALHLYRDTLAFEVLSIEKSYY-- 181 YRR+G+A L + L L +V ++ L V+ +N LY + L + V YY Sbjct: 84 YRRIGLASKLCLE-LENLTQVKDTLFIDLFVKVTNTLGRILY-EKLGYSVFRRVVGYYGR 141 Query: 182 ---------QDGEDAYAMKKVL 194 D DA+ M+K+L Sbjct: 142 EIQKDRNKIDDSVDAFDMRKLL 163 >2PSW-A nrPDB Length = 170 Score = 139 bits (349), Expect = 1e-33, Method: Composition-based stats. Identities = 32/114 (28%), Positives = 59/114 (51%), Gaps = 7/114 (6%) Query: 89 GEKLVGYVLVKMNDDPDQQNEPPNGHITSLSVMRTYRRMGIAENLMRQALFALREVHQAE 148 + VG V +++ +Q+ +I +L + YRR+GI ++ L + + Sbjct: 53 NDIAVGAVCCRVDHSQNQKRL----YIMTLGCLAPYRRLGIGTKMLNHVLNICEKDGTFD 108 Query: 149 YVSLHVRQSNRAALHLYRDTLAFEVLSIEKSYYQDGE--DAYAMKKVLKLEELQ 200 + LHV+ SN +A+ YR FE++ +K+YY+ E DA+ ++K LK+ Q Sbjct: 109 NIYLHVQISNESAIDFYR-KFGFEIIETKKNYYKRIEPADAHVLQKNLKVPSGQ 161 >4PV6-C nrPDB Length = 162 Score = 68.0 bits (164), Expect = 3e-12, Method: Composition-based stats. Identities = 39/191 (20%), Positives = 62/191 (32%), Gaps = 48/191 (25%) Query: 4 NIRRATINDIICMQNANLHNLPENYMMKYYMYHILSWPEASFVATTTTLDCEDSDEQDEN 63 IR + DI + +L E Y + WPE+ V T Sbjct: 12 TIREFSPKDIESVYRIAQTSLTEYYTQALILDLHREWPESFMVYTV-------------- 57 Query: 64 DKLELTLDGTNDGRTIKLDPTYLAPGEKLVGYVLVKMNDDPDQQNEPPNGHITSLSVMRT 123 +VG+++ + I +V Sbjct: 58 -------------------------AGSVVGFIV-------GSKYSRTEARILLFAVDER 85 Query: 124 YRRMGIAENLMRQALFALREVHQAEYVSLHVRQSNRAALHLYRDTLAFEVLSIEKSYYQD 183 +RRMG+ LM L RE V L VR N A+ Y+ F + ++ +YY D Sbjct: 86 FRRMGVGSALMDAFLSLCRE-QNMLSVRLEVRTDNDEAIRFYK-KYGFVITAMLPNYYSD 143 Query: 184 GEDAYAMKKVL 194 +AY M +++ Sbjct: 144 SSNAYTMWRIV 154 >5ISV-A nrPDB Length = 165 Score = 52.6 bits (124), Expect = 2e-07, Method: Composition-based stats. Identities = 27/82 (32%), Positives = 43/82 (52%), Gaps = 5/82 (6%) Query: 118 LSVMRTYRRMGIAENLMRQALFALREVHQAEYVSLHVRQSNRAALHLYRDTLAFEVLSIE 177 ++V Y+R G+ L+ + L + A + L VR SN AA+ LY ++L F +I Sbjct: 69 IAVDPDYQRQGLGRALLEHLIDELEKRGVAT-LWLEVRASNAAAIALY-ESLGFNEATIR 126 Query: 178 KSYY--QDG-EDAYAMKKVLKL 196 ++YY DG EDA M + + Sbjct: 127 RNYYPTTDGREDAIIMALPISM 148 >2CNT-A nrPDB Length = 160 Score = 47.6 bits (111), Expect = 5e-06, Method: Composition-based stats. Identities = 24/82 (29%), Positives = 40/82 (48%), Gaps = 5/82 (6%) Query: 118 LSVMRTYRRMGIAENLMRQALFALREVHQAEYVSLHVRQSNRAALHLYRDTLAFEVLSIE 177 ++V ++R G+ L+ + L + L VR SN AA+ LY ++L F +I Sbjct: 69 IAVDPDFQRRGLGRMLLEHLIDELETRG-VVTLWLEVRASNAAAIALY-ESLGFNEATIR 126 Query: 178 KSYY---QDGEDAYAMKKVLKL 196 ++YY Q EDA M + + Sbjct: 127 RNYYPTAQGHEDAIIMALPISM 148 >5HGZ-A nrPDB Length = 243 Score = 43.7 bits (101), Expect = 6e-05, Method: Composition-based stats. Identities = 18/72 (25%), Positives = 32/72 (44%), Gaps = 3/72 (4%) Query: 113 GHITSLSVMRTYRRMGIAENLMRQALFALREVHQ--AEYVSLHVRQSNRAALHLYRDTLA 170 +I SL V++ +R+ GI L+ + Q + + LHV +N A++ Y + Sbjct: 97 AYILSLGVVKEFRKHGIGSLLLESLKDHISTTAQDHCKAIYLHVLTTNNTAINFYENR-D 155 Query: 171 FEVLSIEKSYYQ 182 F+ YY Sbjct: 156 FKQHHYLPYYYS 167 >1TIQ-A nrPDB Length = 180 Score = 43.4 bits (100), Expect = 8e-05, Method: Composition-based stats. Identities = 31/158 (19%), Positives = 62/158 (39%), Gaps = 8/158 (5%) Query: 46 VATTTTLDCEDSDEQDENDKLEL-----TLDGTNDGRTIKLDPTYLAPGEKLVGYVLVKM 100 ++ T D EN K L T + + ++ ++ GYV V + Sbjct: 19 LSIETFNDTFKEQNSPENMKAYLESAFNTEQLEKELSNMSSQFFFIYFDHEIAGYVKVNI 78 Query: 101 NDDPDQQNEPPNGHITSLSVMRTYRRMGIAENLMRQALFALREVHQAEYVSLHVRQSNRA 160 +D ++ + I + + ++++ G+ ++L+ +A+ E + + L V + N Sbjct: 79 DDAQSEEMGAESLEIERIYIKNSFQKHGLGKHLLNKAIEIALE-RNKKNIWLGVWEKNEN 137 Query: 161 ALHLYRDTLAFEVLSIEKSYYQDGEDA-YAMKKVLKLE 197 A+ Y+ + F Y D E M K L LE Sbjct: 138 AIAFYK-KMGFVQTGAHSFYMGDEEQTDLIMAKTLILE 174 >3PP9-A nrPDB Length = 187 Score = 38.7 bits (88), Expect = 0.002, Method: Composition-based stats. Identities = 23/127 (18%), Positives = 52/127 (40%), Gaps = 13/127 (10%) Query: 47 ATTTTLDCEDSDEQDENDKLELTLDGTNDGRTIKLDPTYLAPGEKLVGYVLVKMNDDPDQ 106 E S Q++N++L + I + + +++G++++K Sbjct: 46 TVEDVPSYEKSYLQNDNEELVYNEYINKPNQIIYIALLH----NQIIGFIVLK------- 94 Query: 107 QNEPPNGHITSLSVMRTYRRMGIAENLMRQALFALREVHQAEYVSLHVRQSNRAALHLYR 166 +N +I ++V + YR +G+ + L+ QA + + L + +N AA Y Sbjct: 95 KNWNNYAYIEDITVDKKYRTLGVGKRLIAQA-KQWAKEGNMPGIMLETQNNNVAACKFY- 152 Query: 167 DTLAFEV 173 + F + Sbjct: 153 EKCGFVI 159 >3JVN-A nrPDB Length = 166 Score = 36.0 bits (81), Expect = 0.013, Method: Composition-based stats. Identities = 32/166 (19%), Positives = 61/166 (36%), Gaps = 29/166 (17%) Query: 5 IRRATINDIICMQNANLHNLPENYMMKYYMYHILSWPEASFVATTTTLDCEDSDEQDEND 64 IRRA D+ C+ + M K + H P+ A+ + + D+ + Sbjct: 5 IRRAKEIDLYCLNSL---------MYKLHDEHHQQCPDLFKTASEIEEEKSIARYLDDPE 55 Query: 65 KLE--LTLDGTNDGRTIKLDPTYLAPGEKLVGYVLVKMNDDPDQQNEPPNGHITSLSVMR 122 + +D G ++ KLV ++ +++ L + + Sbjct: 56 CMVYVAEMDDVIIGFITGHFCELISTVSKLV--MMATIDE---------------LYIEK 98 Query: 123 TYRRMGIAENLMRQALFALREVHQAEYVSLHVRQSNRAALHLYRDT 168 YRR G+AE LM + L + + + + + V N+ AL Y Sbjct: 99 EYRREGVAEQLMMRIEQEL-KDYGVKEIFVEVWDFNKGALEFYNKQ 143 >6HD5-v nrPDB Length = 176 Score = 34.5 bits (77), Expect = 0.036, Method: Composition-based stats. Identities = 26/136 (19%), Positives = 46/136 (33%), Gaps = 7/136 (5%) Query: 60 QDENDKLELTLDGTNDGRTIKLDPTYLAPGEKLVGYVLVKMNDDPDQQNEPPNGHITSLS 119 +D D ++ P LV ++ K ++ + I L Sbjct: 42 EDSLVAKNKKPSSKKDVHFTQMAYYSEIPVGGLVAKLVPKKQNELSLKGI----QIEFLG 97 Query: 120 VMRTYRRMGIAENLMRQALFALREVHQAE-YVSLHV--RQSNRAALHLYRDTLAFEVLSI 176 V+ YR I L++ A E HQ +V L + + + + + V + Sbjct: 98 VLPNYRHKSIGSKLLKFAEDKCSECHQHNVFVYLPAVDDLTKQWFIAHGFEQVGETVNNF 157 Query: 177 EKSYYQDGEDAYAMKK 192 K D +DA +KK Sbjct: 158 IKGVNGDEQDAILLKK 173 >4U9V-B nrPDB Length = 197 Score = 34.5 bits (77), Expect = 0.044, Method: Composition-based stats. Identities = 16/55 (29%), Positives = 24/55 (43%), Gaps = 1/55 (1%) Query: 125 RRMGIAENLMRQALFALREVHQAEYVSLHVRQSNRAALHLYRDTLAFEVLSIEKS 179 RR G+ + Q L + Q + V L V + N A +R+ L FE+ S Sbjct: 124 RRKGLG-KFLIQILQLMANSTQMKKVMLTVFKHNHGAYQFFREALQFEIDDSSPS 177 >4MI4-A nrPDB Length = 197 Score = 33.7 bits (75), Expect = 0.070, Method: Composition-based stats. Identities = 13/45 (28%), Positives = 21/45 (46%) Query: 123 TYRRMGIAENLMRQALFALREVHQAEYVSLHVRQSNRAALHLYRD 167 ++ G A L+ +AL + + LHV N A+HLY + Sbjct: 116 EHQGKGFARTLINRALDYSFTILNLHKIYLHVAVENPKAVHLYEE 160 >1Y9K-A nrPDB Length = 157 Score = 33.7 bits (75), Expect = 0.071, Method: Composition-based stats. Identities = 23/98 (23%), Positives = 41/98 (41%), Gaps = 15/98 (15%) Query: 89 GEKLVG-YVLVKMNDDPDQQNEPPNGHITSLSVMRTYRRMGIAENLMRQALFALREVHQA 147 G ++G YVL++ P I +++V + GI + L+R A+ + + Sbjct: 45 GGSVIGVYVLLETR--------PKTMEIMNIAVAEHLQGKGIGKKLLRHAVETAKGYGMS 96 Query: 148 EYVSLHVRQSNRAA--LHLYRDTLAFEVLSIEKSYYQD 183 + L V N + L LY F + SI+ Y+ Sbjct: 97 K---LEVGTGNSSVSQLALY-QKCGFRIFSIDFDYFSK 130 >4NCZ-A nrPDB Length = 176 Score = 33.7 bits (75), Expect = 0.079, Method: Composition-based stats. Identities = 13/45 (28%), Positives = 21/45 (46%) Query: 123 TYRRMGIAENLMRQALFALREVHQAEYVSLHVRQSNRAALHLYRD 167 ++ G A L+ +AL + + LHV N A+HLY + Sbjct: 95 EHQGKGFARTLINRALDYSFTILNLHKIYLHVAVENPKAVHLYEE 139 >5US1-A nrPDB Length = 189 Score = 33.0 bits (73), Expect = 0.10, Method: Composition-based stats. Identities = 16/57 (28%), Positives = 27/57 (47%) Query: 90 EKLVGYVLVKMNDDPDQQNEPPNGHITSLSVMRTYRRMGIAENLMRQALFALREVHQ 146 +KLVG+V + G++ ++ V ++YRR GI LM Q + +Q Sbjct: 64 QKLVGHVAIIQRHMALDNTPISVGYVEAMVVEQSYRRQGIGRQLMLQTNKIIASCYQ 120 >4R9M-A nrPDB Length = 210 Score = 33.0 bits (73), Expect = 0.11, Method: Composition-based stats. Identities = 15/51 (29%), Positives = 23/51 (45%), Gaps = 1/51 (1%) Query: 123 TYRRMGIAENLMRQALFALREVHQAEYVSLHVRQSNRAALHLYRDTLAFEV 173 Y+ G+A + A+ V + L V + N A+H+YR L F V Sbjct: 117 EYQGKGLATRAAKLAMDYGFTVLNLYKLYLIVDKENEKAIHIYR-KLGFSV 166 >6CY6-A nrPDB Length = 186 Score = 33.0 bits (73), Expect = 0.12, Method: Composition-based stats. Identities = 15/51 (29%), Positives = 23/51 (45%), Gaps = 1/51 (1%) Query: 123 TYRRMGIAENLMRQALFALREVHQAEYVSLHVRQSNRAALHLYRDTLAFEV 173 Y+ G+A + A+ V + L V + N A+H+YR L F V Sbjct: 93 EYQGKGLATRAAKLAMDYGFTVLNLYKLYLIVDKENEKAIHIYR-KLGFSV 142 >3FIX-A nrPDB Length = 183 Score = 32.6 bits (72), Expect = 0.14, Method: Composition-based stats. Identities = 32/192 (16%), Positives = 63/192 (32%), Gaps = 35/192 (18%) Query: 1 MPINIRRATINDIICMQNANLHNLPENYMMKYYMYHILSWPEASFVATTTTLDCEDSDEQ 60 M I IR+ +I D+ + + Y Y +I SW + Sbjct: 25 MSIEIRKLSIEDLETLIEVARESWKWTYAGIYSEEYIESW------------------IR 66 Query: 61 DENDKLELTLDGTNDGRTIKLDPTYLAPGEKLVGYVLVKMNDDPDQQNEPPNGHITSLSV 120 ++ K +L + + + L+G++ +K+ + L + Sbjct: 67 EKYSKEKLLNEIVRSQSNLDILFLGAFADSTLIGFIELKI--------IANKAELLRLYL 118 Query: 121 MRTYRRMGIAENLMRQALFALREVHQAEYVSLHVRQSNRAALHLYRDTLAFEVLSIEKSY 180 Y I + L+ +A +++ L+V + N Y F+V Sbjct: 119 KPEYTHKKIGKTLLLEAEKIMKKKG-ILECRLYVHRQNSVGFSFYY-KNGFKVEDT---- 172 Query: 181 YQDGEDAYAMKK 192 DG D + M+K Sbjct: 173 --DGSD-FIMEK 181 >3K9U-A nrPDB Length = 159 Score = 32.6 bits (72), Expect = 0.17, Method: Composition-based stats. Identities = 32/192 (16%), Positives = 63/192 (32%), Gaps = 35/192 (18%) Query: 1 MPINIRRATINDIICMQNANLHNLPENYMMKYYMYHILSWPEASFVATTTTLDCEDSDEQ 60 M I IR+ +I D+ + + Y Y +I SW + Sbjct: 1 MSIEIRKLSIEDLETLIEVARESWKWTYAGIYSEEYIESW------------------IR 42 Query: 61 DENDKLELTLDGTNDGRTIKLDPTYLAPGEKLVGYVLVKMNDDPDQQNEPPNGHITSLSV 120 ++ K +L + + + L+G++ +K+ + L + Sbjct: 43 EKYSKEKLLNEIVRSQSNLDILFLGAFADSTLIGFIELKI--------IANKAELLRLYL 94 Query: 121 MRTYRRMGIAENLMRQALFALREVHQAEYVSLHVRQSNRAALHLYRDTLAFEVLSIEKSY 180 Y I + L+ +A +++ L+V + N Y F+V Sbjct: 95 KPEYTHKKIGKTLLLEAEKIMKKKG-ILECRLYVHRQNSVGFSFYY-KNGFKVEDT---- 148 Query: 181 YQDGEDAYAMKK 192 DG D + M+K Sbjct: 149 --DGSD-FIMEK 157 >3EC4-A nrPDB Length = 228 Score = 32.2 bits (71), Expect = 0.18, Method: Composition-based stats. Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 3/50 (6%) Query: 123 TYRRMGIAENLMRQALFALREVHQAEYVSLHVRQSNRAALHLYRDTLAFE 172 YR G+A L+R+ + + E LH SN +A+ LY ++L F Sbjct: 168 EYRGRGLAARLIRKVIAGMAARG--EVPYLHSYASNASAIRLY-ESLGFR 214 >4EVY-A nrPDB Length = 166 Score = 30.3 bits (66), Expect = 0.76, Method: Composition-based stats. Identities = 19/82 (23%), Positives = 35/82 (42%), Gaps = 3/82 (3%) Query: 105 DQQNEPPNGHITSLSVMRTYRRMGIAENLMRQALFALREVHQAEYVSLHVRQSNRAALHL 164 + P G + + V+ +RR G+A L+RQA ++ E+ S N + + Sbjct: 88 NGTETSPVGFLEGIYVLPAHRRSGVATMLIRQAEVWAKQFSCTEFAS-DAALDNVISHAM 146 Query: 165 YRDTLAFEVLSIEKSYYQDGED 186 +R +L F+ Y+ D Sbjct: 147 HR-SLGFQETEKVV-YFSKKID 166 >3OWC-A nrPDB Length = 188 Score = 29.5 bits (64), Expect = 1.3, Method: Composition-based stats. Identities = 15/48 (31%), Positives = 20/48 (41%), Gaps = 1/48 (2%) Query: 120 VMRTYRR-MGIAENLMRQALFALREVHQAEYVSLHVRQSNRAALHLYR 166 V+ R G+ ++ L E V L+V N AA HLYR Sbjct: 100 VLAPSARGQGLGLPMLEALLAEAFADADIERVELNVYDWNAAARHLYR 147 >1UFH-A nrPDB Length = 180 Score = 28.7 bits (62), Expect = 2.0, Method: Composition-based stats. Identities = 22/88 (25%), Positives = 35/88 (39%), Gaps = 6/88 (6%) Query: 92 LVGYVLVKMNDDPDQQNEPPNGHITSLSVMRTYRRMGIAENLMRQALFALREVHQAEYVS 151 +VG++ + + QQ I + YR G A+ + A R + +S Sbjct: 96 IVGWLWIHAEPEHPQQE----AFIYDFGLYEPYRGKGYAKQALAALDQAARSMG-IRKLS 150 Query: 152 LHVRQSNRAALHLYRDTLAFEVLSIEKS 179 LHV N+ A LY T F+ + S Sbjct: 151 LHVFAHNQTARKLYEQT-GFQETDVVMS 177 >1ON0-A nrPDB Length = 158 Score = 28.7 bits (62), Expect = 2.1, Method: Composition-based stats. Identities = 22/88 (25%), Positives = 35/88 (39%), Gaps = 6/88 (6%) Query: 92 LVGYVLVKMNDDPDQQNEPPNGHITSLSVMRTYRRMGIAENLMRQALFALREVHQAEYVS 151 +VG++ + + QQ I + YR G A+ + A R + +S Sbjct: 72 IVGWLWIHAEPEHPQQE----AFIYDFGLYEPYRGKGYAKQALAALDQAARSMG-IRKLS 126 Query: 152 LHVRQSNRAALHLYRDTLAFEVLSIEKS 179 LHV N+ A LY T F+ + S Sbjct: 127 LHVFAHNQTARKLYEQT-GFQETDVVMS 153 >3TTH-A nrPDB Length = 170 Score = 28.7 bits (62), Expect = 2.5, Method: Composition-based stats. Identities = 19/73 (26%), Positives = 27/73 (36%), Gaps = 5/73 (6%) Query: 127 MGIAENLMRQALFALREVHQAEYVSLHVRQSNRAALHLYRDTLAFEVLSIEKSYYQDGE- 185 G A + + + L V + N AALH+YR + E + YY G Sbjct: 98 KGYATEATDLTVEYAFSILNLHKIYLLVDEDNPAALHIYRKSGFAEEGKLVDEYYSKGRY 157 Query: 186 ----DAYAMKKVL 194 Y +KK L Sbjct: 158 RTAIRMYVLKKSL 170 >4OGD-A nrPDB Length = 465 Score = 27.6 bits (59), Expect = 4.7, Method: Composition-based stats. Identities = 7/21 (33%), Positives = 10/21 (47%) Query: 180 YYQDGEDAYAMKKVLKLEELQ 200 YY D D + M L+ + Q Sbjct: 94 YYADKADEFLMSTPLETDSGQ 114 >2VRN-A nrPDB Length = 190 Score = 27.6 bits (59), Expect = 5.5, Method: Composition-based stats. Identities = 12/53 (22%), Positives = 25/53 (47%) Query: 142 REVHQAEYVSLHVRQSNRAALHLYRDTLAFEVLSIEKSYYQDGEDAYAMKKVL 194 +E ++ ++V V+ S+ L L T+ + L +E+ + D Y K + Sbjct: 59 QEKYRVDHVVSEVQVSDYDGLLLPGGTVNPDKLRLEEGAMKFVRDMYDAGKPI 111 >3CPF-A nrPDB Length = 138 Score = 27.2 bits (58), Expect = 6.3, Method: Composition-based stats. Identities = 10/46 (21%), Positives = 23/46 (50%) Query: 171 FEVLSIEKSYYQDGEDAYAMKKVLKLEELQISNFTHRRLKENEEKL 216 F+++ I+ Y +D+ +++ L+L E + ++ EE L Sbjct: 76 FQLIGIQDGYLSLLQDSGEVREDLRLPEGDLGKEIEQKYDCGEEIL 121 >4RI1-A nrPDB Length = 186 Score = 27.2 bits (58), Expect = 6.9, Method: Composition-based stats. Identities = 16/77 (20%), Positives = 31/77 (40%), Gaps = 10/77 (12%) Query: 113 GHITSLSVMRTYRRMGI---------AENLMRQALFALREVHQAEYVSLHVRQSNRAALH 163 G IT ++ + +GI E +++ F E Q + L V ++N A+ Sbjct: 83 GSITKINFFHKHGYLGIYKNPFLKNGGETILKALEFIAFEEFQLHSLHLEVMENNFKAIA 142 Query: 164 LYRDTLAFEVLSIEKSY 180 Y + +E+ K + Sbjct: 143 FY-EKNHYELEGRLKGF 158 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.309 0.114 0.279 Lambda K H 0.267 0.0352 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 7,865,457 Number of Sequences: 36641 Number of extensions: 286129 Number of successful extensions: 955 Number of sequences better than 10.0: 35 Number of HSP's better than 10.0 without gapping: 31 Number of HSP's successfully gapped in prelim test: 33 Number of HSP's that attempted gapping in prelim test: 898 Number of HSP's gapped (non-prelim): 74 length of query: 238 length of database: 10,336,785 effective HSP length: 94 effective length of query: 144 effective length of database: 6,892,531 effective search space: 992524464 effective search space used: 992524464 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.4 bits) S2: 57 (26.8 bits)