BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= P07305 (194 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 6N88-C nrPDB 354 1e-98 5NL0-Z nrPDB 182 6e-47 1HST-A nrPDB 143 4e-35 5WCU-U nrPDB 133 5e-32 1GHC-A nrPDB 52 1e-07 1UST-A nrPDB 44 4e-05 2RQP-A nrPDB 42 1e-04 1UHM-A nrPDB 42 2e-04 2LSO-A nrPDB 40 4e-04 1YQA-A nrPDB 35 0.027 1USS-A nrPDB 33 0.063 >6N88-C nrPDB Length = 194 Score = 354 bits (908), Expect = 1e-98, Method: Compositional matrix adjust. Identities = 194/194 (100%), Positives = 194/194 (100%) Query: 1 MTENSTSAPAAKPKRAKASKKSTDHPKYSDMIVAAIQAEKNRAGSSRQSIQKYIKSHYKV 60 MTENSTSAPAAKPKRAKASKKSTDHPKYSDMIVAAIQAEKNRAGSSRQSIQKYIKSHYKV Sbjct: 1 MTENSTSAPAAKPKRAKASKKSTDHPKYSDMIVAAIQAEKNRAGSSRQSIQKYIKSHYKV 60 Query: 61 GENADSQIKLSIKRLVTTGVLKQTKGVGASGSFRLAKSDEPKKSVAFKKTKKEIKKVATP 120 GENADSQIKLSIKRLVTTGVLKQTKGVGASGSFRLAKSDEPKKSVAFKKTKKEIKKVATP Sbjct: 61 GENADSQIKLSIKRLVTTGVLKQTKGVGASGSFRLAKSDEPKKSVAFKKTKKEIKKVATP 120 Query: 121 KKASKPKKAASKAPTKKPKATPVKKAKKKLAATPKKAKKPKTVKAKPVKASKPKKAKPVK 180 KKASKPKKAASKAPTKKPKATPVKKAKKKLAATPKKAKKPKTVKAKPVKASKPKKAKPVK Sbjct: 121 KKASKPKKAASKAPTKKPKATPVKKAKKKLAATPKKAKKPKTVKAKPVKASKPKKAKPVK 180 Query: 181 PKAKSSAKRAGKKK 194 PKAKSSAKRAGKKK Sbjct: 181 PKAKSSAKRAGKKK 194 >5NL0-Z nrPDB Length = 196 Score = 182 bits (463), Expect = 6e-47, Method: Compositional matrix adjust. Identities = 86/100 (86%), Positives = 95/100 (95%) Query: 1 MTENSTSAPAAKPKRAKASKKSTDHPKYSDMIVAAIQAEKNRAGSSRQSIQKYIKSHYKV 60 M ENS + PAAKPKR+KA KKSTDHPKYSDMI+AA+QAEK+R+GSSRQSIQKYIK+HYKV Sbjct: 1 MAENSAATPAAKPKRSKALKKSTDHPKYSDMILAAVQAEKSRSGSSRQSIQKYIKNHYKV 60 Query: 61 GENADSQIKLSIKRLVTTGVLKQTKGVGASGSFRLAKSDE 100 GENADSQIKLSIKRLVT+G LKQTKGVGASGSFRLAK+DE Sbjct: 61 GENADSQIKLSIKRLVTSGALKQTKGVGASGSFRLAKADE 100 >1HST-A nrPDB Length = 90 Score = 143 bits (361), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 67/86 (77%), Positives = 76/86 (88%) Query: 19 SKKSTDHPKYSDMIVAAIQAEKNRAGSSRQSIQKYIKSHYKVGENADSQIKLSIKRLVTT 78 S++S HP YS+MI AAI+AEK+R GSSRQSIQKYIKSHYKVG NAD QIKLSI+RL+ Sbjct: 1 SRRSASHPTYSEMIAAAIRAEKSRGGSSRQSIQKYIKSHYKVGHNADLQIKLSIRRLLAA 60 Query: 79 GVLKQTKGVGASGSFRLAKSDEPKKS 104 GVLKQTKGVGASGSFRLAKSD+ K+S Sbjct: 61 GVLKQTKGVGASGSFRLAKSDKAKRS 86 >5WCU-U nrPDB Length = 76 Score = 133 bits (335), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 62/76 (81%), Positives = 67/76 (88%) Query: 22 STDHPKYSDMIVAAIQAEKNRAGSSRQSIQKYIKSHYKVGENADSQIKLSIKRLVTTGVL 81 S HP YS+MI AAI+AEK+R GSSRQSIQKYIKSHYKVG NAD QIKLSI+RL+ GVL Sbjct: 1 SASHPTYSEMIAAAIRAEKSRGGSSRQSIQKYIKSHYKVGHNADLQIKLSIRRLLAAGVL 60 Query: 82 KQTKGVGASGSFRLAK 97 KQTKGVGASGSFRLAK Sbjct: 61 KQTKGVGASGSFRLAK 76 >1GHC-A nrPDB Length = 75 Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 33/73 (45%), Positives = 43/73 (58%), Gaps = 2/73 (2%) Query: 26 PKYSDMIVAAIQAEKNRAG-SSRQSIQKYIKSHYKVGENADSQIKLSIKRLVTTGVLKQT 84 P +++I A+ A K R G S + Y V E +S+IKL +K LV+ G L QT Sbjct: 4 PSVTELITKAVSASKERKGLSLAALKKALAAGGYDV-EKNNSRIKLGLKSLVSKGTLVQT 62 Query: 85 KGVGASGSFRLAK 97 KG GASGSFRL+K Sbjct: 63 KGTGASGSFRLSK 75 >1UST-A nrPDB Length = 93 Score = 43.9 bits (102), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 32/92 (34%), Positives = 51/92 (55%), Gaps = 10/92 (10%) Query: 14 KRAKASKKSTDHPKYSDMIVAAIQAEKNRAGSSRQSIQKYIKSHYKV---GENADSQIKL 70 K+ +AS KS Y ++I+ + A K R GSSR +++K+IK +Y + N D Sbjct: 1 KKEEASSKS-----YRELIIEGLTALKERKGSSRPALKKFIKENYPIVGSASNFDLYFNN 55 Query: 71 SIKRLVTTGVLKQTKGVGASGSFRLAKSDEPK 102 +IK+ V G +Q K G +G+ +LAK P+ Sbjct: 56 AIKKGVEAGDFEQPK--GPAGAVKLAKKKSPE 85 >2RQP-A nrPDB Length = 88 Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 29/74 (39%), Positives = 43/74 (58%), Gaps = 2/74 (2%) Query: 22 STDHPKYSDMIVAAIQAEKNRAGSSRQSIQKYIKSHY--KVGENADSQIKLSIKRLVTTG 79 S+ PK ++ AI+A ++G+S +I+KYI Y E +K ++KR + G Sbjct: 6 SSPRPKMDAILTEAIKACFQKSGASVVAIRKYIIHKYPSLELERRGYLLKQALKRELNRG 65 Query: 80 VLKQTKGVGASGSF 93 V+KQ KG GASGSF Sbjct: 66 VIKQVKGKGASGSF 79 >1UHM-A nrPDB Length = 78 Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 26/73 (35%), Positives = 42/73 (57%), Gaps = 5/73 (6%) Query: 28 YSDMIVAAIQAEKNRAGSSRQSIQKYIKSHYKV---GENADSQIKLSIKRLVTTGVLKQT 84 Y ++I+ + A K R GSSR +++K+IK +Y + N D +IK+ V G +Q Sbjct: 7 YRELIIEGLTALKERKGSSRPALKKFIKENYPIVGSASNFDLYFNNAIKKGVEAGDFEQP 66 Query: 85 KGVGASGSFRLAK 97 K G +G+ +LAK Sbjct: 67 K--GPAGAVKLAK 77 >2LSO-A nrPDB Length = 83 Score = 40.4 bits (93), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 28/74 (37%), Positives = 40/74 (54%), Gaps = 5/74 (6%) Query: 27 KYSDMIVAAIQAEKNRAGSSRQSIQKYIKSH---YKVGENADSQIKLSIKRLVTTGVLKQ 83 KYS ++V I+ R GSS I Y ++ + +N + +K SIK LV L Q Sbjct: 7 KYSQLVVETIRRLGERNGSSLAKI--YTEAKKVPWFDQQNGRTYLKYSIKALVQNDTLLQ 64 Query: 84 TKGVGASGSFRLAK 97 KG GA+GSF+L + Sbjct: 65 VKGTGANGSFKLNR 78 >1YQA-A nrPDB Length = 87 Score = 34.7 bits (78), Expect = 0.027, Method: Compositional matrix adjust. Identities = 25/73 (34%), Positives = 37/73 (50%), Gaps = 5/73 (6%) Query: 28 YSDMIVAAIQAEKNRAGSSRQSIQKYIKSHYKV---GENADSQIKLSIKRLVTTGVLKQT 84 Y +MI+ ++ + GSSR ++KY+K Y + N D +IK+ V G L Q Sbjct: 10 YKEMILKSMPQLNDGKGSSRIVLKKYVKDTYPIVGSASNFDYLFNSAIKKCVENGELVQP 69 Query: 85 KGVGASGSFRLAK 97 K G SG +L K Sbjct: 70 K--GPSGIIKLNK 80 >1USS-A nrPDB Length = 88 Score = 33.5 bits (75), Expect = 0.063, Method: Compositional matrix adjust. Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 6/74 (8%) Query: 28 YSDMIVAAIQAEKNRAGSSRQSIQKYIKSHY----KVGENADSQIKLSIKRLVTTGVLKQ 83 Y +MI+ ++ + GSSR ++KY+K + K N D +IK+ V G L Q Sbjct: 10 YKEMILKSMPQLNDGKGSSRIVLKKYVKDTFSSKLKTSSNFDYLFNSAIKKCVENGELVQ 69 Query: 84 TKGVGASGSFRLAK 97 K G SG +L K Sbjct: 70 PK--GPSGIIKLNK 81 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 6N88-C nrPDB 186 4e-48 5WCU-U nrPDB 89 1e-18 5NL0-Z nrPDB 86 8e-18 1HST-A nrPDB 81 3e-16 2LSO-A nrPDB 77 5e-15 2RQP-A nrPDB 70 7e-13 1UHM-A nrPDB 64 4e-11 1GHC-A nrPDB 58 3e-09 1UST-A nrPDB 55 1e-08 Sequences not found previously or not previously below threshold: 1YQA-A nrPDB 50 7e-07 1USS-A nrPDB 42 1e-04 5Y9F-A nrPDB 31 0.33 5BPW-A nrPDB 30 0.85 3GDB-A nrPDB 29 1.4 2C5S-A nrPDB 29 1.6 5ZR1-B nrPDB 27 4.1 >6N88-C nrPDB Length = 194 Score = 186 bits (472), Expect = 4e-48, Method: Composition-based stats. Identities = 194/194 (100%), Positives = 194/194 (100%) Query: 1 MTENSTSAPAAKPKRAKASKKSTDHPKYSDMIVAAIQAEKNRAGSSRQSIQKYIKSHYKV 60 MTENSTSAPAAKPKRAKASKKSTDHPKYSDMIVAAIQAEKNRAGSSRQSIQKYIKSHYKV Sbjct: 1 MTENSTSAPAAKPKRAKASKKSTDHPKYSDMIVAAIQAEKNRAGSSRQSIQKYIKSHYKV 60 Query: 61 GENADSQIKLSIKRLVTTGVLKQTKGVGASGSFRLAKSDEPKKSVAFKKTKKEIKKVATP 120 GENADSQIKLSIKRLVTTGVLKQTKGVGASGSFRLAKSDEPKKSVAFKKTKKEIKKVATP Sbjct: 61 GENADSQIKLSIKRLVTTGVLKQTKGVGASGSFRLAKSDEPKKSVAFKKTKKEIKKVATP 120 Query: 121 KKASKPKKAASKAPTKKPKATPVKKAKKKLAATPKKAKKPKTVKAKPVKASKPKKAKPVK 180 KKASKPKKAASKAPTKKPKATPVKKAKKKLAATPKKAKKPKTVKAKPVKASKPKKAKPVK Sbjct: 121 KKASKPKKAASKAPTKKPKATPVKKAKKKLAATPKKAKKPKTVKAKPVKASKPKKAKPVK 180 Query: 181 PKAKSSAKRAGKKK 194 PKAKSSAKRAGKKK Sbjct: 181 PKAKSSAKRAGKKK 194 >5WCU-U nrPDB Length = 76 Score = 88.8 bits (218), Expect = 1e-18, Method: Composition-based stats. Identities = 62/76 (81%), Positives = 67/76 (88%) Query: 22 STDHPKYSDMIVAAIQAEKNRAGSSRQSIQKYIKSHYKVGENADSQIKLSIKRLVTTGVL 81 S HP YS+MI AAI+AEK+R GSSRQSIQKYIKSHYKVG NAD QIKLSI+RL+ GVL Sbjct: 1 SASHPTYSEMIAAAIRAEKSRGGSSRQSIQKYIKSHYKVGHNADLQIKLSIRRLLAAGVL 60 Query: 82 KQTKGVGASGSFRLAK 97 KQTKGVGASGSFRLAK Sbjct: 61 KQTKGVGASGSFRLAK 76 >5NL0-Z nrPDB Length = 196 Score = 86.1 bits (211), Expect = 8e-18, Method: Composition-based stats. Identities = 86/100 (86%), Positives = 95/100 (95%) Query: 1 MTENSTSAPAAKPKRAKASKKSTDHPKYSDMIVAAIQAEKNRAGSSRQSIQKYIKSHYKV 60 M ENS + PAAKPKR+KA KKSTDHPKYSDMI+AA+QAEK+R+GSSRQSIQKYIK+HYKV Sbjct: 1 MAENSAATPAAKPKRSKALKKSTDHPKYSDMILAAVQAEKSRSGSSRQSIQKYIKNHYKV 60 Query: 61 GENADSQIKLSIKRLVTTGVLKQTKGVGASGSFRLAKSDE 100 GENADSQIKLSIKRLVT+G LKQTKGVGASGSFRLAK+DE Sbjct: 61 GENADSQIKLSIKRLVTSGALKQTKGVGASGSFRLAKADE 100 >1HST-A nrPDB Length = 90 Score = 80.7 bits (197), Expect = 3e-16, Method: Composition-based stats. Identities = 67/86 (77%), Positives = 76/86 (88%) Query: 19 SKKSTDHPKYSDMIVAAIQAEKNRAGSSRQSIQKYIKSHYKVGENADSQIKLSIKRLVTT 78 S++S HP YS+MI AAI+AEK+R GSSRQSIQKYIKSHYKVG NAD QIKLSI+RL+ Sbjct: 1 SRRSASHPTYSEMIAAAIRAEKSRGGSSRQSIQKYIKSHYKVGHNADLQIKLSIRRLLAA 60 Query: 79 GVLKQTKGVGASGSFRLAKSDEPKKS 104 GVLKQTKGVGASGSFRLAKSD+ K+S Sbjct: 61 GVLKQTKGVGASGSFRLAKSDKAKRS 86 >2LSO-A nrPDB Length = 83 Score = 76.9 bits (187), Expect = 5e-15, Method: Composition-based stats. Identities = 28/76 (36%), Positives = 40/76 (52%), Gaps = 5/76 (6%) Query: 27 KYSDMIVAAIQAEKNRAGSSRQSIQKYIKSH---YKVGENADSQIKLSIKRLVTTGVLKQ 83 KYS ++V I+ R GSS I Y ++ + +N + +K SIK LV L Q Sbjct: 7 KYSQLVVETIRRLGERNGSSLAKI--YTEAKKVPWFDQQNGRTYLKYSIKALVQNDTLLQ 64 Query: 84 TKGVGASGSFRLAKSD 99 KG GA+GSF+L + Sbjct: 65 VKGTGANGSFKLNRKK 80 >2RQP-A nrPDB Length = 88 Score = 69.6 bits (168), Expect = 7e-13, Method: Composition-based stats. Identities = 29/81 (35%), Positives = 45/81 (55%), Gaps = 2/81 (2%) Query: 22 STDHPKYSDMIVAAIQAEKNRAGSSRQSIQKYIKSHYK--VGENADSQIKLSIKRLVTTG 79 S+ PK ++ AI+A ++G+S +I+KYI Y E +K ++KR + G Sbjct: 6 SSPRPKMDAILTEAIKACFQKSGASVVAIRKYIIHKYPSLELERRGYLLKQALKRELNRG 65 Query: 80 VLKQTKGVGASGSFRLAKSDE 100 V+KQ KG GASGSF + + Sbjct: 66 VIKQVKGKGASGSFVVVQKSR 86 >1UHM-A nrPDB Length = 78 Score = 64.2 bits (154), Expect = 4e-11, Method: Composition-based stats. Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 5/79 (6%) Query: 23 TDHPKYSDMIVAAIQAEKNRAGSSRQSIQKYIKSHYKV---GENADSQIKLSIKRLVTTG 79 Y ++I+ + A K R GSSR +++K+IK +Y + N D +IK+ V G Sbjct: 2 ASSKSYRELIIEGLTALKERKGSSRPALKKFIKENYPIVGSASNFDLYFNNAIKKGVEAG 61 Query: 80 VLKQTKGVGASGSFRLAKS 98 +Q K G +G+ +LAK Sbjct: 62 DFEQPK--GPAGAVKLAKK 78 >1GHC-A nrPDB Length = 75 Score = 57.6 bits (137), Expect = 3e-09, Method: Composition-based stats. Identities = 32/72 (44%), Positives = 46/72 (63%) Query: 26 PKYSDMIVAAIQAEKNRAGSSRQSIQKYIKSHYKVGENADSQIKLSIKRLVTTGVLKQTK 85 P +++I A+ A K R G S +++K + + E +S+IKL +K LV+ G L QTK Sbjct: 4 PSVTELITKAVSASKERKGLSLAALKKALAAGGYDVEKNNSRIKLGLKSLVSKGTLVQTK 63 Query: 86 GVGASGSFRLAK 97 G GASGSFRL+K Sbjct: 64 GTGASGSFRLSK 75 >1UST-A nrPDB Length = 93 Score = 55.3 bits (131), Expect = 1e-08, Method: Composition-based stats. Identities = 32/92 (34%), Positives = 51/92 (55%), Gaps = 10/92 (10%) Query: 14 KRAKASKKSTDHPKYSDMIVAAIQAEKNRAGSSRQSIQKYIKSHYKV---GENADSQIKL 70 K+ +AS KS Y ++I+ + A K R GSSR +++K+IK +Y + N D Sbjct: 1 KKEEASSKS-----YRELIIEGLTALKERKGSSRPALKKFIKENYPIVGSASNFDLYFNN 55 Query: 71 SIKRLVTTGVLKQTKGVGASGSFRLAKSDEPK 102 +IK+ V G +Q K G +G+ +LAK P+ Sbjct: 56 AIKKGVEAGDFEQPK--GPAGAVKLAKKKSPE 85 >1YQA-A nrPDB Length = 87 Score = 49.9 bits (117), Expect = 7e-07, Method: Composition-based stats. Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 5/81 (6%) Query: 22 STDHPKYSDMIVAAIQAEKNRAGSSRQSIQKYIKSHYKV---GENADSQIKLSIKRLVTT 78 S Y +MI+ ++ + GSSR ++KY+K Y + N D +IK+ V Sbjct: 4 SPSSLTYKEMILKSMPQLNDGKGSSRIVLKKYVKDTYPIVGSASNFDYLFNSAIKKCVEN 63 Query: 79 GVLKQTKGVGASGSFRLAKSD 99 G L Q K G SG +L K Sbjct: 64 GELVQPK--GPSGIIKLNKKK 82 >1USS-A nrPDB Length = 88 Score = 42.2 bits (97), Expect = 1e-04, Method: Composition-based stats. Identities = 27/82 (32%), Positives = 38/82 (46%), Gaps = 6/82 (7%) Query: 22 STDHPKYSDMIVAAIQAEKNRAGSSRQSIQKYIK----SHYKVGENADSQIKLSIKRLVT 77 S Y +MI+ ++ + GSSR ++KY+K S K N D +IK+ V Sbjct: 4 SPSSLTYKEMILKSMPQLNDGKGSSRIVLKKYVKDTFSSKLKTSSNFDYLFNSAIKKCVE 63 Query: 78 TGVLKQTKGVGASGSFRLAKSD 99 G L Q K G SG +L K Sbjct: 64 NGELVQPK--GPSGIIKLNKKK 83 >5Y9F-A nrPDB Length = 500 Score = 31.0 bits (68), Expect = 0.33, Method: Composition-based stats. Identities = 13/30 (43%), Positives = 16/30 (53%) Query: 118 ATPKKASKPKKAASKAPTKKPKATPVKKAK 147 A PK P+K A+ APT P VK+ K Sbjct: 467 ARPKPTIGPRKRAAPAPTSTPSPKRVKRRK 496 >5BPW-A nrPDB Length = 843 Score = 29.5 bits (64), Expect = 0.85, Method: Composition-based stats. Identities = 14/64 (21%), Positives = 27/64 (42%) Query: 28 YSDMIVAAIQAEKNRAGSSRQSIQKYIKSHYKVGENADSQIKLSIKRLVTTGVLKQTKGV 87 + + V ++ SS SIQK + SH + G + +K + + + G+ Sbjct: 322 MNQLTVKGLKKLGQSIESSYSSIQKLVISHLQSGSESLLYHLSELKGMASWKQKYEPLGL 381 Query: 88 GASG 91 A+G Sbjct: 382 DAAG 385 >3GDB-A nrPDB Length = 937 Score = 29.1 bits (63), Expect = 1.4, Method: Composition-based stats. Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 3/70 (4%) Query: 125 KPKKAASKAPTKKPKATPVKKAKKKLAATPKKAKKPKTVKAKPVKASKPKKAKPVKPKAK 184 KP++ AS+ + P A K+ K+ A P+ + ++KP A K K V+P Sbjct: 95 KPEEKASEVVAETPSAEAKPKSDKETEAKPEATNQGD--ESKPA-AEANKTEKEVQPDVP 151 Query: 185 SSAKRAGKKK 194 + ++ K K Sbjct: 152 KNTEKTLKPK 161 >2C5S-A nrPDB Length = 413 Score = 28.7 bits (62), Expect = 1.6, Method: Composition-based stats. Identities = 10/32 (31%), Positives = 20/32 (62%), Gaps = 1/32 (3%) Query: 5 STSAPAAKPKRAKASKKSTDHPKYSDMIVAAI 36 + ++PA KPKR KA++ + ++ +I A+ Sbjct: 359 TPASPATKPKREKANRFEAKY-DFTPLIDEAV 389 >5ZR1-B nrPDB Length = 620 Score = 27.2 bits (58), Expect = 4.1, Method: Composition-based stats. Identities = 36/177 (20%), Positives = 62/177 (35%), Gaps = 16/177 (9%) Query: 3 ENSTSAPAAKPKR-AKASKKSTDHPKYSDMIVAAIQAEKNRAGSSRQSIQ------KYIK 55 +N++ PA KPK +KA +K K + + I+ ++ SS++ + + Sbjct: 58 KNTSPDPALKPKTPSKAPRKRGRPRKIQEELTDRIKKDEKDTISSKKKRKLDKDTSGNVN 117 Query: 56 SHYKVGENADSQIKLSIKRLVTTGVLKQTKGVGASGSFRLAKSDEPKKSVAFKKTKKEIK 115 K N K IK + Q + P+ F E Sbjct: 118 EESKTSNNKQVMEKTGIKEKREREKI-QVATTTYEDNV------TPQTDDNFVSNSPEPP 170 Query: 116 KVATPKKASKPKKAASKAPTKKPKATPVKKAKKKLAATPKKAKKPKTVKAKPVKASK 172 + ATP K S +P K+ +K+ K + +P K + PV +K Sbjct: 171 EPATPSKKSLTTNHDFTSPLKQIIMNNLKEYKD--STSPGKLTLSRNFTPTPVPKNK 225 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.296 0.113 0.275 Lambda K H 0.267 0.0343 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 5,001,932 Number of Sequences: 36641 Number of extensions: 150729 Number of successful extensions: 1226 Number of sequences better than 10.0: 61 Number of HSP's better than 10.0 without gapping: 108 Number of HSP's successfully gapped in prelim test: 71 Number of HSP's that attempted gapping in prelim test: 531 Number of HSP's gapped (non-prelim): 416 length of query: 194 length of database: 10,336,785 effective HSP length: 92 effective length of query: 102 effective length of database: 6,965,813 effective search space: 710512926 effective search space used: 710512926 T: 11 A: 40 X1: 16 ( 6.8 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 43 (21.5 bits) S2: 56 (26.4 bits)