BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= P07013 (104 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 5WQV-A nrPDB 214 5e-57 2CCZ-A nrPDB 212 2e-56 4APV-A nrPDB 203 1e-53 3K8A-A nrPDB 39 6e-04 5XGT-A nrPDB 32 0.068 5YYU-A nrPDB 31 0.097 3FHW-A nrPDB 31 0.15 3KLW-A nrPDB 31 0.15 3EN2-A nrPDB 27 1.5 5I32-A nrPDB 26 4.1 5BK4-5 nrPDB 25 7.7 >5WQV-A nrPDB Length = 104 Score = 214 bits (546), Expect = 5e-57, Method: Compositional matrix adjust. Identities = 103/104 (99%), Positives = 104/104 (100%) Query: 1 MTNRLVLSGTVCRAPLRKVSPSGIPHCQFVLEHRSVQEEAGFHRQAWCQMPVIVSGHENQ 60 MTNRLVLSGTVCRAPLRKVSPSGIPHCQFVLEHRSVQEEAGFHRQAWCQMPVIV+GHENQ Sbjct: 1 MTNRLVLSGTVCRAPLRKVSPSGIPHCQFVLEHRSVQEEAGFHRQAWCQMPVIVAGHENQ 60 Query: 61 AITHSITVGSRITVQGFISCHKAKNGLSKMVLHAEQIELIDSGD 104 AITHSITVGSRITVQGFISCHKAKNGLSKMVLHAEQIELIDSGD Sbjct: 61 AITHSITVGSRITVQGFISCHKAKNGLSKMVLHAEQIELIDSGD 104 >2CCZ-A nrPDB Length = 123 Score = 212 bits (540), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 103/104 (99%), Positives = 103/104 (99%) Query: 1 MTNRLVLSGTVCRAPLRKVSPSGIPHCQFVLEHRSVQEEAGFHRQAWCQMPVIVSGHENQ 60 MTNRLVLSGTVCRAPLRKVSPSGIPHCQFVLEHRSVQEEAGFHRQAWCQMPVIVSGHENQ Sbjct: 7 MTNRLVLSGTVCRAPLRKVSPSGIPHCQFVLEHRSVQEEAGFHRQAWCQMPVIVSGHENQ 66 Query: 61 AITHSITVGSRITVQGFISCHKAKNGLSKMVLHAEQIELIDSGD 104 AITHSITVGSRITVQGFISCHKAKNGLSKMVLHAEQIELIDS D Sbjct: 67 AITHSITVGSRITVQGFISCHKAKNGLSKMVLHAEQIELIDSVD 110 >4APV-A nrPDB Length = 112 Score = 203 bits (517), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 96/104 (92%), Positives = 100/104 (96%) Query: 1 MTNRLVLSGTVCRAPLRKVSPSGIPHCQFVLEHRSVQEEAGFHRQAWCQMPVIVSGHENQ 60 MTNRL LSG +CR PLRKVSPSGIPHCQFVLEHRSVQEEAGFHRQAWCQMPVI+SGHENQ Sbjct: 1 MTNRLELSGIICRTPLRKVSPSGIPHCQFVLEHRSVQEEAGFHRQAWCQMPVIISGHENQ 60 Query: 61 AITHSITVGSRITVQGFISCHKAKNGLSKMVLHAEQIELIDSGD 104 AITHSITVGS +TV+GFISCHKAKNGLSKMVLHAEQIELIDSGD Sbjct: 61 AITHSITVGSAVTVRGFISCHKAKNGLSKMVLHAEQIELIDSGD 104 >3K8A-A nrPDB Length = 103 Score = 38.5 bits (88), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 27/91 (29%), Positives = 45/91 (49%), Gaps = 3/91 (3%) Query: 1 MTNRLVLSGTVCRAPLRKVSPSGIPHCQFVLEHRSVQEEAGFHRQAWCQMPVIVSGHENQ 60 TN + L+ + +A + +P+GIP +L+H S QEE G ++P + G Q Sbjct: 6 FTNLVSLAALIEKAFPIRYTPAGIPVLDIILKHESWQEENGQQCLVQLEIPARILGR--Q 63 Query: 61 AITHSITVGSRITVQGFISCHKAKNGLSKMV 91 A G TV+GF++ K++ L M+ Sbjct: 64 AEEWQYRQGDCATVEGFLA-QKSRRSLMPML 93 >5XGT-A nrPDB Length = 111 Score = 32.0 bits (71), Expect = 0.068, Method: Compositional matrix adjust. Identities = 23/97 (23%), Positives = 41/97 (42%), Gaps = 1/97 (1%) Query: 1 MTNRLVLSGTVCRAPLRKVSPSGIPHCQFVLEHRSVQEEAGFHRQAWCQMPVIVSGHENQ 60 M NR+VL G + + P + +PSG+ F L A R+A + +V + Sbjct: 1 MLNRVVLVGRLTKDPEYRTTPSGVSVATFTLAVNRTFTNAQGEREADF-INCVVFRRQAD 59 Query: 61 AITHSITVGSRITVQGFISCHKAKNGLSKMVLHAEQI 97 + + ++ GS V G + +N + V E + Sbjct: 60 NVNNYLSKGSLAGVDGRLQSRNYENQEGRRVFVTEVV 96 >5YYU-A nrPDB Length = 112 Score = 31.2 bits (69), Expect = 0.097, Method: Compositional matrix adjust. Identities = 23/95 (24%), Positives = 42/95 (44%), Gaps = 1/95 (1%) Query: 1 MTNRLVLSGTVCRAPLRKVSPSGIPHCQFVLEHRSVQEEAGFHRQAWCQMPVIVSGHENQ 60 M NR+VL G + + P + +P+G+ F L A R+A + V+V + + Sbjct: 1 MLNRVVLVGRLTKDPELRSTPNGVNVGTFTLAVNRTFTNAQGEREADF-INVVVFKKQAE 59 Query: 61 AITHSITVGSRITVQGFISCHKAKNGLSKMVLHAE 95 + + ++ GS V G + +N + V E Sbjct: 60 NVKNYLSKGSLAGVDGRLQTRNYENKDGQRVFVTE 94 >3FHW-A nrPDB Length = 115 Score = 30.8 bits (68), Expect = 0.15, Method: Compositional matrix adjust. Identities = 26/94 (27%), Positives = 45/94 (47%), Gaps = 3/94 (3%) Query: 3 NRLVLSGTVCRAPLRKVSPSGIPHCQFVLEHRSVQEEAGFHRQAWCQMPVIVSGHENQAI 62 N L LS V + +P+G+P + +L H S EAG R+ + + G + Sbjct: 2 NTLELSARVLECGAMRHTPAGLPALELLLVHESEVVEAGHPRRVELTISAVALGDLALLL 61 Query: 63 THSITVGSRITVQGFISCHKAKNGLSKMVLHAEQ 96 + +G+ + VQGF++ A+ K+ LH +Q Sbjct: 62 ADT-PLGTEMQVQGFLA--PARKDSVKVKLHLQQ 92 >3KLW-A nrPDB Length = 98 Score = 30.8 bits (68), Expect = 0.15, Method: Compositional matrix adjust. Identities = 26/94 (27%), Positives = 45/94 (47%), Gaps = 3/94 (3%) Query: 3 NRLVLSGTVCRAPLRKVSPSGIPHCQFVLEHRSVQEEAGFHRQAWCQMPVIVSGHENQAI 62 N L LS V + +P+G+P + +L H S EAG R+ + + G + Sbjct: 2 NTLELSARVLECGAMRHTPAGLPALELLLVHESEVVEAGHPRRVELTISAVALGDLALLL 61 Query: 63 THSITVGSRITVQGFISCHKAKNGLSKMVLHAEQ 96 + +G+ + VQGF++ A+ K+ LH +Q Sbjct: 62 ADT-PLGTEMQVQGFLA--PARKDSVKVKLHLQQ 92 >3EN2-A nrPDB Length = 101 Score = 27.3 bits (59), Expect = 1.5, Method: Compositional matrix adjust. Identities = 23/97 (23%), Positives = 44/97 (45%), Gaps = 5/97 (5%) Query: 3 NRLVLSGTVCRAPLRKVSPSGIPHCQFVLEHRSVQEEAGFHRQAWCQMPVIVSGHENQAI 62 NRL L T+ + + +P+G+P +L + EA RQ + + +G + ++ Sbjct: 3 NRLQLVATLVEREVMRYTPAGVPIVNCLLSYSGQAMEAQAARQVEFSIEALGAG-KMASV 61 Query: 63 THSITVGSRITVQGFIS-CHKAKNGLSKMVLHAEQIE 98 I G+ + GF++ H++ L V H +E Sbjct: 62 LDRIAPGTVLECVGFLARKHRSSKAL---VFHISGLE 95 >5I32-A nrPDB Length = 275 Score = 25.8 bits (55), Expect = 4.1, Method: Compositional matrix adjust. Identities = 11/22 (50%), Positives = 14/22 (63%) Query: 53 IVSGHENQAITHSITVGSRITV 74 I GH N A+T + VG +ITV Sbjct: 102 ISGGHVNPAVTFGLAVGGQITV 123 >5BK4-5 nrPDB Length = 775 Score = 25.0 bits (53), Expect = 7.7, Method: Composition-based stats. Identities = 10/37 (27%), Positives = 23/37 (62%) Query: 49 QMPVIVSGHENQAITHSITVGSRITVQGFISCHKAKN 85 +MP ++ ++ +T+ + G+R+T+ G S + +KN Sbjct: 269 EMPRNLTMTCDRYLTNKVIPGTRVTIVGIYSIYNSKN 305 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 5WQV-A nrPDB 182 3e-47 4APV-A nrPDB 180 9e-47 2CCZ-A nrPDB 176 2e-45 3K8A-A nrPDB 131 6e-32 Sequences not found previously or not previously below threshold: 3FHW-A nrPDB 43 3e-05 3KLW-A nrPDB 42 5e-05 3EN2-A nrPDB 40 2e-04 2IHF-A nrPDB 39 7e-04 2IHE-A nrPDB 39 7e-04 2CWA-A nrPDB 38 0.001 6BHW-A nrPDB 33 0.025 5XGT-A nrPDB 32 0.050 5YYU-A nrPDB 31 0.100 3TQY-A nrPDB 30 0.17 1SE8-A nrPDB 29 0.39 5NGJ-A nrPDB 28 0.95 1Z9F-A nrPDB 27 1.6 4Y2G-A nrPDB 26 3.9 3BJE-A nrPDB 25 5.1 1OQA-A nrPDB 25 5.2 >5WQV-A nrPDB Length = 104 Score = 182 bits (462), Expect = 3e-47, Method: Composition-based stats. Identities = 103/104 (99%), Positives = 104/104 (100%) Query: 1 MTNRLVLSGTVCRAPLRKVSPSGIPHCQFVLEHRSVQEEAGFHRQAWCQMPVIVSGHENQ 60 MTNRLVLSGTVCRAPLRKVSPSGIPHCQFVLEHRSVQEEAGFHRQAWCQMPVIV+GHENQ Sbjct: 1 MTNRLVLSGTVCRAPLRKVSPSGIPHCQFVLEHRSVQEEAGFHRQAWCQMPVIVAGHENQ 60 Query: 61 AITHSITVGSRITVQGFISCHKAKNGLSKMVLHAEQIELIDSGD 104 AITHSITVGSRITVQGFISCHKAKNGLSKMVLHAEQIELIDSGD Sbjct: 61 AITHSITVGSRITVQGFISCHKAKNGLSKMVLHAEQIELIDSGD 104 >4APV-A nrPDB Length = 112 Score = 180 bits (457), Expect = 9e-47, Method: Composition-based stats. Identities = 96/104 (92%), Positives = 100/104 (96%) Query: 1 MTNRLVLSGTVCRAPLRKVSPSGIPHCQFVLEHRSVQEEAGFHRQAWCQMPVIVSGHENQ 60 MTNRL LSG +CR PLRKVSPSGIPHCQFVLEHRSVQEEAGFHRQAWCQMPVI+SGHENQ Sbjct: 1 MTNRLELSGIICRTPLRKVSPSGIPHCQFVLEHRSVQEEAGFHRQAWCQMPVIISGHENQ 60 Query: 61 AITHSITVGSRITVQGFISCHKAKNGLSKMVLHAEQIELIDSGD 104 AITHSITVGS +TV+GFISCHKAKNGLSKMVLHAEQIELIDSGD Sbjct: 61 AITHSITVGSAVTVRGFISCHKAKNGLSKMVLHAEQIELIDSGD 104 >2CCZ-A nrPDB Length = 123 Score = 176 bits (447), Expect = 2e-45, Method: Composition-based stats. Identities = 103/104 (99%), Positives = 103/104 (99%) Query: 1 MTNRLVLSGTVCRAPLRKVSPSGIPHCQFVLEHRSVQEEAGFHRQAWCQMPVIVSGHENQ 60 MTNRLVLSGTVCRAPLRKVSPSGIPHCQFVLEHRSVQEEAGFHRQAWCQMPVIVSGHENQ Sbjct: 7 MTNRLVLSGTVCRAPLRKVSPSGIPHCQFVLEHRSVQEEAGFHRQAWCQMPVIVSGHENQ 66 Query: 61 AITHSITVGSRITVQGFISCHKAKNGLSKMVLHAEQIELIDSGD 104 AITHSITVGSRITVQGFISCHKAKNGLSKMVLHAEQIELIDS D Sbjct: 67 AITHSITVGSRITVQGFISCHKAKNGLSKMVLHAEQIELIDSVD 110 >3K8A-A nrPDB Length = 103 Score = 131 bits (330), Expect = 6e-32, Method: Composition-based stats. Identities = 27/91 (29%), Positives = 45/91 (49%), Gaps = 3/91 (3%) Query: 1 MTNRLVLSGTVCRAPLRKVSPSGIPHCQFVLEHRSVQEEAGFHRQAWCQMPVIVSGHENQ 60 TN + L+ + +A + +P+GIP +L+H S QEE G ++P + G Q Sbjct: 6 FTNLVSLAALIEKAFPIRYTPAGIPVLDIILKHESWQEENGQQCLVQLEIPARILGR--Q 63 Query: 61 AITHSITVGSRITVQGFISCHKAKNGLSKMV 91 A G TV+GF++ K++ L M+ Sbjct: 64 AEEWQYRQGDCATVEGFLA-QKSRRSLMPML 93 >3FHW-A nrPDB Length = 115 Score = 42.8 bits (99), Expect = 3e-05, Method: Composition-based stats. Identities = 27/98 (27%), Positives = 46/98 (46%), Gaps = 3/98 (3%) Query: 3 NRLVLSGTVCRAPLRKVSPSGIPHCQFVLEHRSVQEEAGFHRQAWCQMPVIVSGHENQAI 62 N L LS V + +P+G+P + +L H S EAG R+ + + G + Sbjct: 2 NTLELSARVLECGAMRHTPAGLPALELLLVHESEVVEAGHPRRVELTISAVALGDLALLL 61 Query: 63 THSITVGSRITVQGFISCHKAKNGLSKMVLHAEQIELI 100 + +G+ + VQGF++ A+ K+ LH +Q I Sbjct: 62 ADT-PLGTEMQVQGFLAP--ARKDSVKVKLHLQQARRI 96 >3KLW-A nrPDB Length = 98 Score = 42.4 bits (98), Expect = 5e-05, Method: Composition-based stats. Identities = 27/98 (27%), Positives = 46/98 (46%), Gaps = 3/98 (3%) Query: 3 NRLVLSGTVCRAPLRKVSPSGIPHCQFVLEHRSVQEEAGFHRQAWCQMPVIVSGHENQAI 62 N L LS V + +P+G+P + +L H S EAG R+ + + G + Sbjct: 2 NTLELSARVLECGAMRHTPAGLPALELLLVHESEVVEAGHPRRVELTISAVALGDLALLL 61 Query: 63 THSITVGSRITVQGFISCHKAKNGLSKMVLHAEQIELI 100 + +G+ + VQGF++ A+ K+ LH +Q I Sbjct: 62 ADT-PLGTEMQVQGFLAP--ARKDSVKVKLHLQQARRI 96 >3EN2-A nrPDB Length = 101 Score = 40.1 bits (92), Expect = 2e-04, Method: Composition-based stats. Identities = 21/96 (21%), Positives = 40/96 (41%), Gaps = 3/96 (3%) Query: 3 NRLVLSGTVCRAPLRKVSPSGIPHCQFVLEHRSVQEEAGFHRQAWCQMPVIVSGHENQAI 62 NRL L T+ + + +P+G+P +L + EA RQ + + +G + Sbjct: 3 NRLQLVATLVEREVMRYTPAGVPIVNCLLSYSGQAMEAQAARQVEFSIEALGAGKMASVL 62 Query: 63 THSITVGSRITVQGFISCHKAKNGLSKMVLHAEQIE 98 I G+ + GF++ + +V H +E Sbjct: 63 D-RIAPGTVLECVGFLA--RKHRSSKALVFHISGLE 95 >2IHF-A nrPDB Length = 239 Score = 38.5 bits (88), Expect = 7e-04, Method: Composition-based stats. Identities = 19/77 (24%), Positives = 32/77 (41%), Gaps = 5/77 (6%) Query: 3 NRLVLSGTVCRAPLRKVSPSGIPHCQFVLE-HRSVQEEAGFHRQAWCQMPVIVSGHENQA 61 N++ L GT+ P + +P G+ L + +E+G R+ V + G QA Sbjct: 6 NQVFLIGTLTARPDMRYTPGGLAILDLNLAGQDAFTDESGQEREVPWYHRVRLLGR--QA 63 Query: 62 ITHS--ITVGSRITVQG 76 + G I V+G Sbjct: 64 EMWGDLLEKGQLIFVEG 80 >2IHE-A nrPDB Length = 264 Score = 38.5 bits (88), Expect = 7e-04, Method: Composition-based stats. Identities = 19/77 (24%), Positives = 32/77 (41%), Gaps = 5/77 (6%) Query: 3 NRLVLSGTVCRAPLRKVSPSGIPHCQFVLE-HRSVQEEAGFHRQAWCQMPVIVSGHENQA 61 N++ L GT+ P + +P G+ L + +E+G R+ V + G QA Sbjct: 6 NQVFLIGTLTARPDMRYTPGGLAILDLNLAGQDAFTDESGQEREVPWYHRVRLLGR--QA 63 Query: 62 ITHS--ITVGSRITVQG 76 + G I V+G Sbjct: 64 EMWGDLLEKGQLIFVEG 80 >2CWA-A nrPDB Length = 263 Score = 37.8 bits (86), Expect = 0.001, Method: Composition-based stats. Identities = 17/86 (19%), Positives = 34/86 (39%), Gaps = 5/86 (5%) Query: 3 NRLVLSGTVCRAPLRKVSPSGIPHCQFVLEHRS-VQEEAGFHRQAWCQMPVIVSGHENQA 61 NR+ L G + P + +P+G+ L + + + G R+ V + G QA Sbjct: 6 NRVFLIGALATRPDMRYTPAGLAILDLTLAGQDLLLSDNGGEREVSWYHRVRLLGR--QA 63 Query: 62 ITHS--ITVGSRITVQGFISCHKAKN 85 + G + V+G + + + Sbjct: 64 EMWGDLLDQGQLVFVEGRLEYRQWER 89 >6BHW-A nrPDB Length = 119 Score = 33.1 bits (74), Expect = 0.025, Method: Composition-based stats. Identities = 24/112 (21%), Positives = 47/112 (41%), Gaps = 19/112 (16%) Query: 1 MTNRLVLSGTVCRAPLRKVSPSGIPHCQFVL------EHRSVQEEAGF-HRQAWCQMPVI 53 M NR+VL G + + P + +P+G F L ++S + EA F + W Sbjct: 4 MLNRVVLVGRLTKDPELRYTPNGAAVATFTLAVNRTFTNQSGEREADFINCVTW------ 57 Query: 54 VSGHENQAITHSITVGSRITVQGFISCHKAKNGLSKMV----LHAEQIELID 101 + + + + + GS V G + +N + V + AE ++ ++ Sbjct: 58 --RRQAENVANFLKKGSLAGVDGRLQTRNYENQQGQRVFVTEVQAESVQFLE 107 >5XGT-A nrPDB Length = 111 Score = 32.4 bits (72), Expect = 0.050, Method: Composition-based stats. Identities = 23/97 (23%), Positives = 41/97 (42%), Gaps = 1/97 (1%) Query: 1 MTNRLVLSGTVCRAPLRKVSPSGIPHCQFVLEHRSVQEEAGFHRQAWCQMPVIVSGHENQ 60 M NR+VL G + + P + +PSG+ F L A R+A + +V + Sbjct: 1 MLNRVVLVGRLTKDPEYRTTPSGVSVATFTLAVNRTFTNAQGEREADF-INCVVFRRQAD 59 Query: 61 AITHSITVGSRITVQGFISCHKAKNGLSKMVLHAEQI 97 + + ++ GS V G + +N + V E + Sbjct: 60 NVNNYLSKGSLAGVDGRLQSRNYENQEGRRVFVTEVV 96 >5YYU-A nrPDB Length = 112 Score = 31.2 bits (69), Expect = 0.100, Method: Composition-based stats. Identities = 21/85 (24%), Positives = 39/85 (45%), Gaps = 1/85 (1%) Query: 1 MTNRLVLSGTVCRAPLRKVSPSGIPHCQFVLEHRSVQEEAGFHRQAWCQMPVIVSGHENQ 60 M NR+VL G + + P + +P+G+ F L A R+A + V+V + + Sbjct: 1 MLNRVVLVGRLTKDPELRSTPNGVNVGTFTLAVNRTFTNAQGEREADF-INVVVFKKQAE 59 Query: 61 AITHSITVGSRITVQGFISCHKAKN 85 + + ++ GS V G + +N Sbjct: 60 NVKNYLSKGSLAGVDGRLQTRNYEN 84 >3TQY-A nrPDB Length = 158 Score = 30.4 bits (67), Expect = 0.17, Method: Composition-based stats. Identities = 23/112 (20%), Positives = 47/112 (41%), Gaps = 20/112 (17%) Query: 3 NRLVLSGTVCRAPLRKVSPSGIPHCQFVLEHRS---------VQEEAGFHRQAWCQMPVI 53 N+++L G + + P + +P+G L + +QE +HR A+ Sbjct: 9 NKVILIGNLGQDPEVRYTPNGNAVANVTLATSTTWRDKQTGELQERTEWHRIAFFNRLAE 68 Query: 54 VSGHENQAITHSITVGSRITVQGFISCHK--AKNGLSKMVLH--AEQIELID 101 + G + GS+I ++G + K KNG+ + A ++ ++D Sbjct: 69 IVGEY-------LRKGSKIYIEGSLRTRKWQDKNGVDRYTTEIIANEMHMLD 113 >1SE8-A nrPDB Length = 301 Score = 29.3 bits (64), Expect = 0.39, Method: Composition-based stats. Identities = 13/75 (17%), Positives = 27/75 (36%), Gaps = 2/75 (2%) Query: 3 NRLVLSGTVCRAPLRKVSPSGIPHCQF-VLEHRSVQEEAGFHRQAWCQMPVIVSGHENQA 61 N +++ G V R P + +P+G + + + Q+ G RQ + Sbjct: 130 NEVLVLGNVTRDPEIRYTPAGDAVLSLSIAVNENYQDRQG-QRQEKVHYIDATLWRDLAE 188 Query: 62 ITHSITVGSRITVQG 76 + G + + G Sbjct: 189 NMKELRKGDPVMIMG 203 >5NGJ-A nrPDB Length = 477 Score = 28.1 bits (61), Expect = 0.95, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 4/48 (8%) Query: 43 HRQAWCQMPVIV--SGHENQAITHSITVGSRITVQ--GFISCHKAKNG 86 +R A QM V V S N+ +T +IT G T+ G + +K G Sbjct: 391 NRSATLQMSVEVTPSSARNKEVTWAITAGDAATINATGLLRADASKTG 438 >1Z9F-A nrPDB Length = 153 Score = 27.4 bits (59), Expect = 1.6, Method: Composition-based stats. Identities = 16/77 (20%), Positives = 30/77 (38%), Gaps = 1/77 (1%) Query: 1 MTNRLVLSGTVCRAPLRKVSPSGIPHCQFVLEHRSVQEEAG-FHRQAWCQMPVIVSGHEN 59 N+++L G + R P + + SG P F + V + Q ++ G Sbjct: 15 FFNKIILIGRLVRDPEERYTLSGTPVTTFTIAVDRVPRKNAPDDAQTTDFFRIVTFGRLA 74 Query: 60 QAITHSITVGSRITVQG 76 + +T G + V+G Sbjct: 75 EFARTYLTKGRLVLVEG 91 >4Y2G-A nrPDB Length = 224 Score = 25.8 bits (55), Expect = 3.9, Method: Composition-based stats. Identities = 9/29 (31%), Positives = 15/29 (51%), Gaps = 1/29 (3%) Query: 26 HCQFVLEHRSVQEEAGFHRQAW-CQMPVI 53 H V++ + E+ GFH C+ PV+ Sbjct: 170 HPIVVVQPDAWTEDNGFHAIGQMCEAPVV 198 >3BJE-A nrPDB Length = 349 Score = 25.4 bits (54), Expect = 5.1, Method: Composition-based stats. Identities = 7/28 (25%), Positives = 12/28 (42%) Query: 59 NQAITHSITVGSRITVQGFISCHKAKNG 86 ++A +G+ T GF C + G Sbjct: 232 SEADKQQYVIGTTATASGFYGCQGRRVG 259 >1OQA-A nrPDB Length = 110 Score = 25.4 bits (54), Expect = 5.2, Method: Composition-based stats. Identities = 9/29 (31%), Positives = 15/29 (51%), Gaps = 1/29 (3%) Query: 26 HCQFVLEHRSVQEEAGFHRQAW-CQMPVI 53 H V++ + E+ GFH C+ PV+ Sbjct: 52 HPIVVVQPDAWTEDNGFHAIGQMCEAPVV 80 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.313 0.131 0.370 Lambda K H 0.267 0.0396 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 3,727,440 Number of Sequences: 36641 Number of extensions: 124256 Number of successful extensions: 234 Number of sequences better than 10.0: 20 Number of HSP's better than 10.0 without gapping: 27 Number of HSP's successfully gapped in prelim test: 5 Number of HSP's that attempted gapping in prelim test: 200 Number of HSP's gapped (non-prelim): 35 length of query: 104 length of database: 10,336,785 effective HSP length: 71 effective length of query: 33 effective length of database: 7,735,274 effective search space: 255264042 effective search space used: 255264042 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.4 bits) S2: 52 (24.7 bits)