BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= P06839 (778 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 5OQJ-0 nrPDB 1499 0.0 5IY7-W nrPDB 826 0.0 5H8W-A nrPDB 101 1e-21 3CRV-A nrPDB 55 1e-07 2VL7-A nrPDB 45 1e-04 6FWS-A nrPDB 37 0.022 2XZL-A nrPDB 33 0.35 5FJ3-A nrPDB 32 1.5 5Y60-A nrPDB 32 1.5 4WID-B nrPDB 31 1.7 3MZY-A nrPDB 31 2.3 4QMD-A nrPDB 30 4.7 5BN5-A nrPDB 30 5.1 3VV1-A nrPDB 29 6.0 4ZEN-A nrPDB 29 9.0 >5OQJ-0 nrPDB Length = 778 Score = 1499 bits (3881), Expect = 0.0, Method: Compositional matrix adjust. Identities = 730/763 (95%), Positives = 730/763 (95%) Query: 1 MKFYIDDLPVLFPYPKIYPEQYNYMCDIKKTLDVGGNSILEMPSGTGKTVSLLSLTIAYQ 60 MKFYIDDLPVLFPYPKIYPEQYNYMCDIKKTLDVGGNSILEMPSGTGKTVSLLSLTIAYQ Sbjct: 1 MKFYIDDLPVLFPYPKIYPEQYNYMCDIKKTLDVGGNSILEMPSGTGKTVSLLSLTIAYQ 60 Query: 61 MHYPEHRKIIYCSRTMSEIEKALVELENLMDYRTKELGYQEDFRGLGLTSRKNLCLHPEV 120 MHYPEHRKIIYCSRTMSEIEKALVELENLMDYRTKELGYQEDFRGLGLTSRKNLCLHPEV Sbjct: 61 MHYPEHRKIIYCSRTMSEIEKALVELENLMDYRTKELGYQEDFRGLGLTSRKNLCLHPEV 120 Query: 121 SKERKGTVVDEKCRRMTNGQAKRKLEEDPEANVELCEYHENLYNIEVEDYLPKGVFSFEK 180 SKERKGTVVDEKCRRMTNGQAKRKLEEDPEANVELCEYHENLYNIEVEDYLPKGVFSFEK Sbjct: 121 SKERKGTVVDEKCRRMTNGQAKRKLEEDPEANVELCEYHENLYNIEVEDYLPKGVFSFEK 180 Query: 181 LLKYCEEKTLCPYFIVRRMISLCNIIIYSYHYLLDPKIAERVSNEVSKDSIVIFDEAHNI 240 LLKYCEEKTLCPYFIVRRMISLCNIIIYSYHYLLDPKIAERVSNEVSKDSIVIFDEAHNI Sbjct: 181 LLKYCEEKTLCPYFIVRRMISLCNIIIYSYHYLLDPKIAERVSNEVSKDSIVIFDEAHNI 240 Query: 241 DNVCIESLSLDLTTDALRRATRGANALDERISEVRKVDSQKLQDEYEKLVQGLHSADILT 300 DNVCIESLSLDLTTDALRRATRGANALDERISEVRKVDSQKLQDEYEKLVQGL Sbjct: 241 DNVCIESLSLDLTTDALRRATRGANALDERISEVRKVDSQKLQDEYEKLVQGLXXXXXXX 300 Query: 301 DQEEPFVETPVLPQDLLTEAIPGNIRRAEHFVSFLKRLIEYLKTRMKVLHVISETPKSFL 360 RAEHFVSFLKRLIEYLKTRMKVLHVISETPKSFL Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXRAEHFVSFLKRLIEYLKTRMKVLHVISETPKSFL 360 Query: 361 QHLKQLTFIERKPLRFCSERLSLLVRTLEVTEVEDFTALKDIATFATLISTYEEGFLLII 420 QHLKQLTFIERKPLRFCSERLSLLVRTLEVTEVEDFTALKDIATFATLISTYEEGFLLII Sbjct: 361 QHLKQLTFIERKPLRFCSERLSLLVRTLEVTEVEDFTALKDIATFATLISTYEEGFLLII 420 Query: 421 EPYEIENAAVPNPIMRFTCLDASIAIKPVFERFSSVIITSGTISPLDMYPRMLNFKTVLQ 480 EPYEIENAAVPNPIMRFTCLDASIAIKPVFERFSSVIITSGTISPLDMYPRMLNFKTVLQ Sbjct: 421 EPYEIENAAVPNPIMRFTCLDASIAIKPVFERFSSVIITSGTISPLDMYPRMLNFKTVLQ 480 Query: 481 KSYAMTLAKKSFLPMIITKGSDQVAISSRFEIRNDPSIVRNYGSMLVEFAKITPDGMVVF 540 KSYAMTLAKKSFLPMIITKGSDQVAISSRFEIRNDPSIVRNYGSMLVEFAKITPDGMVVF Sbjct: 481 KSYAMTLAKKSFLPMIITKGSDQVAISSRFEIRNDPSIVRNYGSMLVEFAKITPDGMVVF 540 Query: 541 FPSYLYMESIVSMWQTMGILDEVWKHKLILVETPDAQETSLALETYRKACSNGRGAILLS 600 FPSYLYMESIVSMWQTMGILDEVWKHKLILVETPDAQETSLALETYRKACSNGRGAILLS Sbjct: 541 FPSYLYMESIVSMWQTMGILDEVWKHKLILVETPDAQETSLALETYRKACSNGRGAILLS 600 Query: 601 VARGKVSEGIDFDHQYGRTVLMIGIPFQYTESRILKARLEFMRENYRIRENDFLSFDAMR 660 VARGKVSEGIDFDHQYGRTVLMIGIPFQYTESRILKARLEFMRENYRIRENDFLSFDAMR Sbjct: 601 VARGKVSEGIDFDHQYGRTVLMIGIPFQYTESRILKARLEFMRENYRIRENDFLSFDAMR 660 Query: 661 HAAQCLGRVLRGKDDYGVMVLADRRFSRKRSQLPKWIAQGLSDADLNLSTDMAISNTKQF 720 HAAQCLGRVLRGKDDYGVMVLADRRFSRKRSQLPKWIAQGLSDADLNLSTDMAISNTKQF Sbjct: 661 HAAQCLGRVLRGKDDYGVMVLADRRFSRKRSQLPKWIAQGLSDADLNLSTDMAISNTKQF 720 Query: 721 LRTMAQPTDPKDQEGVSVWSYEDLIKHQNSRKDQGGFIENENK 763 LRTMAQPTDPKDQEGVSVWSYEDLIKHQNSRKDQGGFIENENK Sbjct: 721 LRTMAQPTDPKDQEGVSVWSYEDLIKHQNSRKDQGGFIENENK 763 >5IY7-W nrPDB Length = 760 Score = 826 bits (2134), Expect = 0.0, Method: Compositional matrix adjust. Identities = 390/735 (53%), Positives = 535/735 (72%), Gaps = 6/735 (0%) Query: 1 MKFYIDDLPVLFPYPKIYPEQYNYMCDIKKTLDVGGNSILEMPSGTGKTVSLLSLTIAYQ 60 MK +D L V FPY IYPEQ++YM ++K+TLD G+ +LEMPSGTGKTVSLL+L +AYQ Sbjct: 1 MKLNVDGLLVYFPYDYIYPEQFSYMRELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAYQ 60 Query: 61 MHYP-EHRKIIYCSRTMSEIEKALVELENLMDYRTKELGYQEDFRGLGLTSRKNLCLHPE 119 YP E K+IYCSRT+ EIEK + EL L+++ K+ G + F GL L+SRKNLC+HPE Sbjct: 61 RAYPLEVTKLIYCSRTVPEIEKVIEELRKLLNFYEKQEGEKLPFLGLALSSRKNLCIHPE 120 Query: 120 VSKERKGTVVDEKCRRMTNGQAKRKLEEDPEANVELCEYHENLYNIEVEDYLPKGVFSFE 179 V+ R G VD KC +T + + + D ++ C ++E E LP G+++ + Sbjct: 121 VTPLRFGKDVDGKCHSLTASYVRAQYQHD--TSLPHCRFYEEFDAHGREVPLPAGIYNLD 178 Query: 180 KLLKYCEEKTLCPYFIVRRMISLCNIIIYSYHYLLDPKIAERVSNEVSKDSIVIFDEAHN 239 L + CPYF+ R I N+++YSYHYLLDPKIA+ VS E+++ ++V+FDEAHN Sbjct: 179 DLKALGRRQGWCPYFLARYSILHANVVVYSYHYLLDPKIADLVSKELARKAVVVFDEAHN 238 Query: 240 IDNVCIESLSLDLTTDALRRATRGANALDERISEVRKVDSQKLQDEYEKLVQGLHSADIL 299 IDNVCI+S+S++LT L R L + + +++ D Q+L+DEY +LV+GL A Sbjct: 239 IDNVCIDSMSVNLTRRTLDRCQGNLETLQKTVLRIKETDEQRLRDEYRRLVEGLREASA- 297 Query: 300 TDQEEPFVETPVLPQDLLTEAIPGNIRRAEHFVSFLKRLIEYLKTRMKVLHVISETPKSF 359 + + + PVLP ++L EA+PG+IR AEHF+ FL+RL+EY+K R++V HV+ E+P +F Sbjct: 298 ARETDAHLANPVLPDEVLQEAVPGSIRTAEHFLGFLRRLLEYVKWRLRVQHVVQESPPAF 357 Query: 360 LQHLKQLTFIERKPLRFCSERLSLLVRTLEVTEVEDFTALKDIATFATLISTYEEGFLLI 419 L L Q I+RKPLRFC+ERL L+ TLE+T++ DF+ L +A FATL+STY +GF +I Sbjct: 358 LSGLAQRVCIQRKPLRFCAERLRSLLHTLEITDLADFSPLTLLANFATLVSTYAKGFTII 417 Query: 420 IEPYEIENAAVPNPIMRFTCLDASIAIKPVFERFSSVIITSGTISPLDMYPRMLNFKTVL 479 IEP++ + NPI+ F+C+DAS+AIKPVFERF SVIITSGT+SPLD+YP++L+F V Sbjct: 418 IEPFDDRTPTIANPILHFSCMDASLAIKPVFERFQSVIITSGTLSPLDIYPKILDFHPVT 477 Query: 480 QKSYAMTLAKKSFLPMIITKGSDQVAISSRFEIRNDPSIVRNYGSMLVEFAKITPDGMVV 539 ++ MTLA+ PMII +G+DQVAISS+FE R D +++RNYG++L+E + + PDG+V Sbjct: 478 MATFTMTLARVCLCPMIIGRGNDQVAISSKFETREDIAVIRNYGNLLLEMSAVVPDGIVA 537 Query: 540 FFPSYLYMESIVSMWQTMGILDEVWKHKLILVETPDAQETSLALETYRKACSNGRGAILL 599 FF SY YMES V+ W GIL+ + ++KL+ +ET D ETS+ALE Y++AC NGRGAILL Sbjct: 538 FFTSYQYMESTVASWYEQGILENIQRNKLLFIETQDGAETSVALEKYQEACENGRGAILL 597 Query: 600 SVARGKVSEGIDFDHQYGRTVLMIGIPFQYTESRILKARLEFMRENYRIRENDFLSFDAM 659 SVARGKVSEGIDF H YGR V+M G+P+ YT+SRILKARLE++R+ ++IRENDFL+FDAM Sbjct: 598 SVARGKVSEGIDFVHHYGRAVIMFGVPYVYTQSRILKARLEYLRDQFQIRENDFLTFDAM 657 Query: 660 RHAAQCLGRVLRGKDDYGVMVLADRRFSR--KRSQLPKWIAQGLSDADLNLSTDMAISNT 717 RHAAQC+GR +RGK DYG+MV AD+RF+R KR +LP+WI + L+DA+LNL+ D + Sbjct: 658 RHAAQCVGRAIRGKTDYGLMVFADKRFARGDKRGKLPRWIQEHLTDANLNLTVDEGVQVA 717 Query: 718 KQFLRTMAQPTDPKD 732 K FLR MAQP +D Sbjct: 718 KYFLRQMAQPFHRED 732 >5H8W-A nrPDB Length = 597 Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 142/673 (21%), Positives = 290/673 (43%), Gaps = 124/673 (18%) Query: 40 LEMPSGTGKTVSLLSLTIAYQMHYPEHRKIIYCSRTMSEIEKALVELENLMDYRTKELGY 99 LE P+G+GKT+ ++L A Q K++Y RT S+ E+ + EL + L Sbjct: 9 LESPTGSGKTI--MALKSALQYSSERKLKVLYLVRTNSQEEQVIKEL--------RSLSS 58 Query: 100 QEDFRGLGLTSRKNLC--------LHPEVSKERKGTVVDEKCRRMTNGQAKRKLEEDPEA 151 R + + R N+C LH E++ E + K R + G Sbjct: 59 TMKIRAIPMQGRVNMCILYRMVDDLH-EINAESLAKFCNMKKREVMAG------------ 105 Query: 152 NVELCEYHE-NLYNIEVEDYLPKGVFSFEKLLKYCEEKTLCPYFIVRRMISLCNIIIYSY 210 N C Y + + E + +L + + E+ Y E +CPY ++ + +I+I Y Sbjct: 106 NEAACPYFNFKIRSDETKRFLFDELPTAEEFYDYGERNNVCPYESMKAALPDADIVIAPY 165 Query: 211 HYLLDPKIAERVSNE--VSKDSIV-IFDEAHNIDNVCIESLSLDLTTDALRRATRGANAL 267 Y L+ +AE+ + VS++ IV I DEAHN+ ++ S ++ ++L RA R A A Sbjct: 166 AYFLNRSVAEKFLSHWGVSRNQIVIILDEAHNLPDIGRSIGSFRISVESLNRADREAQAY 225 Query: 268 DERISEVRKVDSQKLQDEYEKLVQGLHSADILTDQEEPFVETPVLPQDLLTEAI-PGNIR 326 + +L Q +H +D++ + + + Q +++E G++R Sbjct: 226 GD-----------------PELSQKIHVSDLIE-----MIRSAL--QSMVSERCGKGDVR 261 Query: 327 -RAEHFVSFL----KRLIEYLKTRMKVLHVISETPKSFLQHLKQLTFIERKPLRFCSERL 381 R + F+ ++ KR +++ + L++ E ++++ K+ + + P + S Sbjct: 262 IRFQEFMEYMRIMNKRSEREIRSLLNALYLFGE----YVENEKEK--VGKVPFSYAS--- 312 Query: 382 SLLVRTLEVTEVEDFTALKDIATFATLISTYEEGFLLIIEPYEIENAAVPNPIMRFTCLD 441 S+ R + ++ +D +A ++S + G+ M+ LD Sbjct: 313 SVASRIIAFSD-------QDEEKYAAILSPEDGGY------------------MQAAALD 347 Query: 442 ASIAIKPVFERFSSVIITSGTISPLDMYPRMLNFKTVLQKSYAMTLAKKSFLPMIITKGS 501 S ++ + E S I SGT+ P D Y + F+ +K + + ++ Sbjct: 348 PSGILEVLKE--SKTIHMSGTLDPFDFYSDITGFEIPFKKIGEIFPPENRYIAYY----- 400 Query: 502 DQVAISSRFEIRNDPSIVRNYGSMLVEFAKITPDGMVVFFPSYLYMESIVSMWQTMGILD 561 +SS+++ ++ + R +++ + +V+FPSY M+ + + + Sbjct: 401 --DGVSSKYDTLDEKELDR-MATVIEDIILKVKKNTIVYFPSYSLMDRV----ENRVSFE 453 Query: 562 EVWKHKLILVETPDAQETSLALETYRKACSNGRGAILLSVARGKVSEGIDFDHQYGRTVL 621 + +++ I D +E L+ +R+ G I +V+ G++SEGI+F ++ Sbjct: 454 HMKEYRGI-----DQKELYSMLKKFRR----DHGTI-FAVSGGRLSEGINFPGNELEMII 503 Query: 622 MIGIPFQYTESRILKARLEFMRENYRIRENDFLSFDAMRHAAQCLGRVLRGKDDYGVMVL 681 + G+PF ++ I ++ ++ Y + + Q +GR++R +D G V+ Sbjct: 504 LAGLPFPRPDA-INRSLFDYYCRKYGKGWEYSVVYPTAIKIRQEIGRLIRSAEDTGAAVI 562 Query: 682 ADRRFSRKRSQLP 694 D+R + R +P Sbjct: 563 LDKRAGQFRKFIP 575 >3CRV-A nrPDB Length = 551 Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 57/244 (23%), Positives = 112/244 (45%), Gaps = 40/244 (16%) Query: 455 SVIITSGTISPLDMYPRMLNFK-TVLQKSYAMTLAKKSFLPMIITKGSDQ----VAISSR 509 S+I+ SGT+ P + ++ K +L + K+ GS + V ++S+ Sbjct: 317 SIILMSGTLPPREYMEKVWGIKRNMLYLDVEREIQKR-------VSGSYECYIGVDVTSK 369 Query: 510 FEIRNDPSIVRNYGSMLVEFAKITPDGMVVFFPSYLYMESIVSMWQTMGILDEVWKHKLI 569 +++R+D ++ + Y L++ ++V FPSY M+ ++S ++ Sbjct: 370 YDMRSD-NMWKRYADYLLKIYFQAKANVLVVFPSYEIMDRVMS--------------RIS 414 Query: 570 LVETPDAQETSLALETYRKACSNGRGAILLSVARGKVSEGIDF---DHQYGRTVLMIGIP 626 L + +++++S+ E A S ++ SV +GK++EGI+ D V+++GIP Sbjct: 415 LPKYVESEDSSV--EDLYSAISANNKVLIGSVGKGKLAEGIELRNNDRSLISDVVIVGIP 472 Query: 627 F----QYTESRILKARLEFMRENYRIRENDFLSFDAMRHAAQCLGRVLRGKDDYGVMVLA 682 + Y + + L+ REN E A+ Q +GR +R +D + L Sbjct: 473 YPPPDDYLKILAQRVSLKMNREN----EEFLFKIPALVTIKQAIGRAIRDVNDKCNVWLL 528 Query: 683 DRRF 686 D+RF Sbjct: 529 DKRF 532 Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust. Identities = 42/204 (20%), Positives = 85/204 (41%), Gaps = 42/204 (20%) Query: 40 LEMPSGTGKTVSLLSLTIAYQMHYPEHRKIIYCSRTMSEIEKALVELENLMDYRTKELGY 99 L P+G+GKT L SL ++ ++ K+++ RT +E +L + + R + Sbjct: 27 LNAPTGSGKT--LFSLLVSLEVK----PKVLFVVRTHNEFYPIYRDLTKIREKRNITFSF 80 Query: 100 QEDFRGLGLTSRKNLCLHPEVSKERKGTVVDEKCRRMTNGQAKRKLEEDPEANVELCEYH 159 L + + CL+ E E + D C+ CE Sbjct: 81 --------LVGKPSSCLYAEKGAESE----DIPCK--------------------YCELK 108 Query: 160 ENLYNIEVEDYLPKGVFSFEKLLKYCEEKTLCPYFIVRRMISLCNIIIYSYHYLLDPKIA 219 ++ ++ +D + +KL K + CPY+ + + ++I +Y Y + Sbjct: 109 GSIVEVKTDD---SPLSLVKKLKKDGLQDKFCPYYSLLNSLYKADVIALTYPYFFIDRYR 165 Query: 220 ERVSNEVSKDSIVIFDEAHNIDNV 243 E + ++ ++ +++ DEAHN+D V Sbjct: 166 EFIDIDL-REYMIVIDEAHNLDKV 188 >2VL7-A nrPDB Length = 540 Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 45/200 (22%), Positives = 88/200 (44%), Gaps = 24/200 (12%) Query: 511 EIRNDPSIVRNYGSMLVEFAKITPDGMVVFFPSYLYMESIVSMWQTMGILDEVWKHKLIL 570 E+R S + Y +L + + ++VFFPSY +ES+ + +++E K + Sbjct: 361 ELRKRNSNIPIYSILLKRIYENSSKSVLVFFPSYEMLESVRIHLSGIPVIEENKKTR--- 417 Query: 571 VETPDAQETSLALETYRKACSNGRGAILLSVARGKVSEGIDFDHQYG--RTVLMIGIPFQ 628 E L L G+ ++L V R K SEG++F + ++++ G+P+ Sbjct: 418 ------HEEVLEL------MKTGKYLVML-VMRAKESEGVEFREKENLFESLVLAGLPYP 464 Query: 629 YTESRILKARLEFMRENYRIRENDFLSFDAMRHAAQCLGRVLRGKDDYGVMVLADRRFSR 688 +++ R+E + + E+ + Q +GR R +DY + L D R+ Sbjct: 465 NVSDDMVRKRIERLSKLTGKDEDSIIHDLTAIVIKQTIGRAFRDPNDYVKIYLCDSRYRE 524 Query: 689 KRSQLPKWIAQGLSDADLNL 708 + L G+S+ ++ L Sbjct: 525 YFADL------GISEKEIKL 538 Score = 33.5 bits (75), Expect = 0.40, Method: Compositional matrix adjust. Identities = 37/148 (25%), Positives = 65/148 (43%), Gaps = 25/148 (16%) Query: 146 EEDPEANVELCEYHENLYNIEVEDYLP-KGVFSFEKLLKYCEEKTLCPYFIVRRMISLCN 204 EE E N C + + IE D P K + F+ + YC PY+ +R + + Sbjct: 95 EEPDEINCSKCRLKDKIKTIE--DKEPSKLIEEFKDAVDYC------PYYSLRANLKDKD 146 Query: 205 IIIYSYHYLLDPKIAERV---SNEVSK--DSIVIFDEAHNI---DNVCIESLSLDLTTDA 256 +I +Y YL I V ++ K D +++ DEAHN+ D +S + A Sbjct: 147 VIAMTYPYLFQKPIRNSVFCNKDDCLKLEDYLIVIDEAHNLLEADKWFTRKISRKMLERA 206 Query: 257 LRRATRGANALDERISEVRKVDSQKLQD 284 L+ E + + ++D++K++D Sbjct: 207 LKEI--------EIVERLNRIDAKKVKD 226 >6FWS-A nrPDB Length = 716 Score = 37.4 bits (85), Expect = 0.022, Method: Compositional matrix adjust. Identities = 47/236 (19%), Positives = 109/236 (46%), Gaps = 9/236 (3%) Query: 21 QYNYMCDIKKTL--DVGGNSILEMPSGTGKTVSLLSLTIAYQMHYPEHRKIIYCSRTMSE 78 Q + D+ KTL + G + +E P+G GKT+S L IA + E + ++ + ++ Sbjct: 31 QRQMIADVAKTLAGEEGRHLAIEAPTGVGKTLSYLIPGIA--IAREEQKTLVVSTANVAL 88 Query: 79 IEKALVELENLMDYRTKELGYQEDF-RGLGLTSRKNLCL-HPEVSKERKGTVVDEKCRRM 136 ++ + L+ +L + F RG + R L E +++ +D++ Sbjct: 89 QDQIYSKDLPLLKKIIPDLKFTAAFGRGRYVCPRNLTALASTEPTQQDLLAFLDDELTPN 148 Query: 137 TNGQAKRKLEEDPEANVELCEYHENLYNIEVEDYLPKGVFSFEK--LLKYCEEKTLCPYF 194 + KR + + + + + +I ++D L + + + + L + C CP+F Sbjct: 149 NQEEQKRCAKLKGDLDTYKWDGLRDHTDIAIDDDLWRRLSTDKASCLNRNCYYYRECPFF 208 Query: 195 IVRRMISLCNIIIYSYHYLLDPKIAERVSNEVSKDSIVIFDEAHNIDNVCIESLSL 250 + RR I +++ ++ ++ +E V + K+ +++ DE H++ +V ++L + Sbjct: 209 VARREIQEAEVVVANHALVMAAMESEAVLPD-PKNLLLVLDEGHHLPDVARDALEM 263 Score = 37.4 bits (85), Expect = 0.025, Method: Compositional matrix adjust. Identities = 58/264 (21%), Positives = 106/264 (40%), Gaps = 57/264 (21%) Query: 449 VFERFSSVIITSGTISPLDMYPRMLNFKTVLQKSYAMTLAKKSFLPMIITKGSDQVAISS 508 ++ +I+TS T+ L+ + R+ + +K+ G VA+ S Sbjct: 448 LWRSIPHIIVTSATLRSLNSFSRLQEMSGLKEKA-----------------GDRFVALDS 490 Query: 509 RFE-----------IRNDPSIVRNYGSMLVEFAKITPD--------GMVVFFPSYLYMES 549 F +R +PSI N + E A + GM+V F S M+ Sbjct: 491 PFNHCEQGKIVIPRMRVEPSI-DNEEQHIAEMAAFFREQVESKKHLGMLVLFASGRAMQR 549 Query: 550 IVSMWQTMGILDEVWKHKLILVETPDAQETSLALETYRKACSNGRGAILLSVARGKVSEG 609 LD V +L+L+ D L +E +RK +NG ++L+ + +EG Sbjct: 550 F---------LDYVTDLRLMLLVQGDQPRYRL-VELHRKRVANGERSVLVGLQ--SFAEG 597 Query: 610 IDFDHQYGRTVLMIGIPFQYTESRILKARLEFM----RENYRIRENDFLSFDAMRHAAQC 665 +D V + I F +S ++ E++ R + ++ SF+ + Q Sbjct: 598 LDLKGDLLSQVHIHKIAFPPIDSPVVITEGEWLKSLNRYPFEVQSLPSASFNLI----QQ 653 Query: 666 LGRVLRGKDDYGVMVLADRRFSRK 689 +GR++R +G +V+ D+R K Sbjct: 654 VGRLIRSHGCWGEVVIYDKRLLTK 677 >2XZL-A nrPDB Length = 802 Score = 33.5 bits (75), Expect = 0.35, Method: Compositional matrix adjust. Identities = 26/90 (28%), Positives = 43/90 (47%), Gaps = 7/90 (7%) Query: 38 SILEMPSGTGKTVSLLSLTIAYQMHYPEHRKIIYCSRTMSEIEKALVELENL-MDYRTKE 96 S+++ P GTGKTV+ S TI Y + +I+ C+ + ++ +L +L + Sbjct: 378 SLIQGPPGTGKTVT--SATIVYHLSKIHKDRILVCAPSNVAVDHLAAKLRDLGLKVVRLT 435 Query: 97 LGYQEDFRGLGLTSRKNLCLHPEVSKERKG 126 +ED +S NL LH V + KG Sbjct: 436 AKSREDVE----SSVSNLALHNLVGRGAKG 461 >5FJ3-A nrPDB Length = 443 Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust. Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 5/71 (7%) Query: 606 VSEGIDFDHQYGRTVLMIGIPFQYTESRILKARLEFMREN-YRIREND--FLSFDAMRHA 662 +S+ DF +QY ++ G Q E R+ + E Y +RE++ F + A R+A Sbjct: 87 LSQARDFINQYYSSIKRSGS--QAHEERLQEVEAEVASTGTYHLRESELVFGAKQAWRNA 144 Query: 663 AQCLGRVLRGK 673 +C+GR+ GK Sbjct: 145 PRCVGRIQWGK 155 >5Y60-A nrPDB Length = 578 Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust. Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 7/72 (9%) Query: 25 MCDIKKTLDVGGNSILEMPSGTGKTVSLLSLTIAYQMHYPEHRKIIY--CSRTMSEIEKA 82 + D+ + +GG + + P G+GKTV+ SL + ++Y C +E+ Sbjct: 211 ILDVLFPVAMGGTAAIPGPFGSGKTVTQQSLA-----KWSNADVVVYVGCGERGNEMTDV 265 Query: 83 LVELENLMDYRT 94 LVE L D +T Sbjct: 266 LVEFPELTDPKT 277 >4WID-B nrPDB Length = 365 Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust. Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 31/88 (35%) Query: 269 ERISEVRKVDSQKLQDEYEKLVQGLHSADILTDQ---------------EEPFVETPVLP 313 E+++++RKV S D++EKL QG+ ++ +L D+ E F +TPV P Sbjct: 91 EQLTDIRKVFS----DKFEKLEQGIQNSYLLLDKLKTPFQDMRCLFEVANEQFNDTPVPP 146 Query: 314 QDLLTEAIPGNIRRAEHFVSFLKRLIEY 341 Q E F+ LK++++Y Sbjct: 147 Q------------YKEKFMVCLKQIVQY 162 >3MZY-A nrPDB Length = 164 Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust. Identities = 26/82 (31%), Positives = 38/82 (46%), Gaps = 8/82 (9%) Query: 166 EVEDYLPKGVFSFEKLLK-YCEEKTLCPYF----IVRRMISLCNIIIYSYHYLLDPKIAE 220 E ED + +G+ K +K Y E K+ F I R MIS H +L+ + Sbjct: 3 EKEDLVQEGILGLLKAIKFYDETKSSFSSFAFLCIRREMISAIRKANTQKHMVLNEALK- 61 Query: 221 RVSNEVSKDSIVIFDEAHNIDN 242 +N + +DS DE HNI+N Sbjct: 62 --TNAILEDSAYFDDEGHNINN 81 >4QMD-A nrPDB Length = 193 Score = 29.6 bits (65), Expect = 4.7, Method: Compositional matrix adjust. Identities = 45/197 (22%), Positives = 79/197 (40%), Gaps = 22/197 (11%) Query: 12 FPYPKIYPEQYNYMCDIKKTL------DVGGNSILEMPSGTGKTVSLLSLTIAYQMHYPE 65 FP IY + C IK + + G +LE + TG V LLS Y +H Sbjct: 4 FPIAGIYDTTTDNKCSIKTAVAKNMLDPITGQKLLEAQAATGGIVDLLSRE-RYSVHKAM 62 Query: 66 HRKIIYCSRT--MSEIEKALVELENLMDYRTKELGYQEDFRGLGLTSRKNLCLHPEVSKE 123 R +I + T + +KA +E+ K L E + G R+++ H +V Sbjct: 63 ERGLIENTSTQRLLNAQKAFTGIED--PVTKKRLSVGEAVQK-GWMPRESVLPHLQVQHL 119 Query: 124 RKGTVVDEKCRRMTNGQA--KRKLEEDPEANVELCEY--HENLYNIEVEDYLPKGVFSFE 179 G + ++ R+ QA + E EL + E+ Y ++ D + K S++ Sbjct: 120 TGGLIDPKRTGRIPIQQALLSGMISE------ELAQLLQDESSYEKDLTDPISKERLSYK 173 Query: 180 KLLKYCEEKTLCPYFIV 196 + + C + L ++ Sbjct: 174 EAMGRCRKDPLSGLLLL 190 >5BN5-A nrPDB Length = 570 Score = 29.6 bits (65), Expect = 5.1, Method: Compositional matrix adjust. Identities = 28/91 (30%), Positives = 44/91 (48%), Gaps = 16/91 (17%) Query: 15 PKIYPEQ--YNY-------MCDIKKTLDVGGNSILEMPSGTGKTVSLLSLTIAYQMHYPE 65 P+ Y E+ YNY + DI + GG++ + P G+GKTV L+ IA + + Sbjct: 187 PRPYKEKLDYNYPFITGTRVLDIMFPIAKGGSAAVPGPFGSGKTV--LNQQIA---KWAD 241 Query: 66 HRKIIY--CSRTMSEIEKALVELENLMDYRT 94 +IY C +E+ + L E L D +T Sbjct: 242 SDIVIYIGCGERGNEMTEVLEEFPKLKDPKT 272 >3VV1-A nrPDB Length = 160 Score = 29.3 bits (64), Expect = 6.0, Method: Composition-based stats. Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 1/51 (1%) Query: 721 LRTMAQPTDPKDQEGVSVWSYEDLIKHQNSRKDQGGFIENENKEGE-QDED 770 LR + PT + +++ + +D++ H N+R D+G + N G Q ED Sbjct: 48 LRLVLLPTSADSRFHINLRTPDDIVLHFNARFDEGAVVNNSTSGGGWQSED 98 >4ZEN-A nrPDB Length = 485 Score = 28.9 bits (63), Expect = 9.0, Method: Compositional matrix adjust. Identities = 29/93 (31%), Positives = 43/93 (46%), Gaps = 9/93 (9%) Query: 684 RRFSRKRSQLPKWIAQ-GLSDADLNLSTDMAISNTK-QFLRTMAQP-----TDPKDQEGV 736 RR + R QLP I + GL + D D+ + + +LR Q TD D G Sbjct: 371 RRIA-NRYQLPILITENGLGEFDTLEPGDIVNDDYRIDYLRRHVQEIQRAITDGVDVLGY 429 Query: 737 SVWSYEDLIKHQNSRKDQGGFIE-NENKEGEQD 768 WS+ DL+ N + + GF+ N + E E+D Sbjct: 430 CAWSFTDLLSWLNGYQKRYGFVYVNRDDESEKD 462 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 5OQJ-0 nrPDB 1097 0.0 5IY7-W nrPDB 1080 0.0 5H8W-A nrPDB 609 e-174 3CRV-A nrPDB 212 6e-55 2VL7-A nrPDB 193 3e-49 Sequences not found previously or not previously below threshold: 6FWS-A nrPDB 84 2e-16 4JLV-A nrPDB 38 0.015 2XZL-A nrPDB 34 0.28 1A0P-A nrPDB 34 0.34 2WJV-A nrPDB 32 0.95 6EJ5-A nrPDB 32 0.98 5BN5-A nrPDB 31 1.9 4UAO-A nrPDB 31 2.0 4A2W-A nrPDB 31 2.0 4A36-A nrPDB 31 2.1 4A2Q-A nrPDB 31 2.1 3L4G-A nrPDB 31 2.5 3WFO-A nrPDB 31 2.5 3NFY-A nrPDB 31 2.9 4MMI-A nrPDB 30 3.7 5NQD-A nrPDB 30 4.7 3HDH-A nrPDB 29 6.5 >5OQJ-0 nrPDB Length = 778 Score = 1097 bits (2837), Expect = 0.0, Method: Composition-based stats. Identities = 730/763 (95%), Positives = 730/763 (95%) Query: 1 MKFYIDDLPVLFPYPKIYPEQYNYMCDIKKTLDVGGNSILEMPSGTGKTVSLLSLTIAYQ 60 MKFYIDDLPVLFPYPKIYPEQYNYMCDIKKTLDVGGNSILEMPSGTGKTVSLLSLTIAYQ Sbjct: 1 MKFYIDDLPVLFPYPKIYPEQYNYMCDIKKTLDVGGNSILEMPSGTGKTVSLLSLTIAYQ 60 Query: 61 MHYPEHRKIIYCSRTMSEIEKALVELENLMDYRTKELGYQEDFRGLGLTSRKNLCLHPEV 120 MHYPEHRKIIYCSRTMSEIEKALVELENLMDYRTKELGYQEDFRGLGLTSRKNLCLHPEV Sbjct: 61 MHYPEHRKIIYCSRTMSEIEKALVELENLMDYRTKELGYQEDFRGLGLTSRKNLCLHPEV 120 Query: 121 SKERKGTVVDEKCRRMTNGQAKRKLEEDPEANVELCEYHENLYNIEVEDYLPKGVFSFEK 180 SKERKGTVVDEKCRRMTNGQAKRKLEEDPEANVELCEYHENLYNIEVEDYLPKGVFSFEK Sbjct: 121 SKERKGTVVDEKCRRMTNGQAKRKLEEDPEANVELCEYHENLYNIEVEDYLPKGVFSFEK 180 Query: 181 LLKYCEEKTLCPYFIVRRMISLCNIIIYSYHYLLDPKIAERVSNEVSKDSIVIFDEAHNI 240 LLKYCEEKTLCPYFIVRRMISLCNIIIYSYHYLLDPKIAERVSNEVSKDSIVIFDEAHNI Sbjct: 181 LLKYCEEKTLCPYFIVRRMISLCNIIIYSYHYLLDPKIAERVSNEVSKDSIVIFDEAHNI 240 Query: 241 DNVCIESLSLDLTTDALRRATRGANALDERISEVRKVDSQKLQDEYEKLVQGLHSADILT 300 DNVCIESLSLDLTTDALRRATRGANALDERISEVRKVDSQKLQDEYEKLVQGL Sbjct: 241 DNVCIESLSLDLTTDALRRATRGANALDERISEVRKVDSQKLQDEYEKLVQGLXXXXXXX 300 Query: 301 DQEEPFVETPVLPQDLLTEAIPGNIRRAEHFVSFLKRLIEYLKTRMKVLHVISETPKSFL 360 RAEHFVSFLKRLIEYLKTRMKVLHVISETPKSFL Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXRAEHFVSFLKRLIEYLKTRMKVLHVISETPKSFL 360 Query: 361 QHLKQLTFIERKPLRFCSERLSLLVRTLEVTEVEDFTALKDIATFATLISTYEEGFLLII 420 QHLKQLTFIERKPLRFCSERLSLLVRTLEVTEVEDFTALKDIATFATLISTYEEGFLLII Sbjct: 361 QHLKQLTFIERKPLRFCSERLSLLVRTLEVTEVEDFTALKDIATFATLISTYEEGFLLII 420 Query: 421 EPYEIENAAVPNPIMRFTCLDASIAIKPVFERFSSVIITSGTISPLDMYPRMLNFKTVLQ 480 EPYEIENAAVPNPIMRFTCLDASIAIKPVFERFSSVIITSGTISPLDMYPRMLNFKTVLQ Sbjct: 421 EPYEIENAAVPNPIMRFTCLDASIAIKPVFERFSSVIITSGTISPLDMYPRMLNFKTVLQ 480 Query: 481 KSYAMTLAKKSFLPMIITKGSDQVAISSRFEIRNDPSIVRNYGSMLVEFAKITPDGMVVF 540 KSYAMTLAKKSFLPMIITKGSDQVAISSRFEIRNDPSIVRNYGSMLVEFAKITPDGMVVF Sbjct: 481 KSYAMTLAKKSFLPMIITKGSDQVAISSRFEIRNDPSIVRNYGSMLVEFAKITPDGMVVF 540 Query: 541 FPSYLYMESIVSMWQTMGILDEVWKHKLILVETPDAQETSLALETYRKACSNGRGAILLS 600 FPSYLYMESIVSMWQTMGILDEVWKHKLILVETPDAQETSLALETYRKACSNGRGAILLS Sbjct: 541 FPSYLYMESIVSMWQTMGILDEVWKHKLILVETPDAQETSLALETYRKACSNGRGAILLS 600 Query: 601 VARGKVSEGIDFDHQYGRTVLMIGIPFQYTESRILKARLEFMRENYRIRENDFLSFDAMR 660 VARGKVSEGIDFDHQYGRTVLMIGIPFQYTESRILKARLEFMRENYRIRENDFLSFDAMR Sbjct: 601 VARGKVSEGIDFDHQYGRTVLMIGIPFQYTESRILKARLEFMRENYRIRENDFLSFDAMR 660 Query: 661 HAAQCLGRVLRGKDDYGVMVLADRRFSRKRSQLPKWIAQGLSDADLNLSTDMAISNTKQF 720 HAAQCLGRVLRGKDDYGVMVLADRRFSRKRSQLPKWIAQGLSDADLNLSTDMAISNTKQF Sbjct: 661 HAAQCLGRVLRGKDDYGVMVLADRRFSRKRSQLPKWIAQGLSDADLNLSTDMAISNTKQF 720 Query: 721 LRTMAQPTDPKDQEGVSVWSYEDLIKHQNSRKDQGGFIENENK 763 LRTMAQPTDPKDQEGVSVWSYEDLIKHQNSRKDQGGFIENENK Sbjct: 721 LRTMAQPTDPKDQEGVSVWSYEDLIKHQNSRKDQGGFIENENK 763 >5IY7-W nrPDB Length = 760 Score = 1080 bits (2793), Expect = 0.0, Method: Composition-based stats. Identities = 390/735 (53%), Positives = 535/735 (72%), Gaps = 6/735 (0%) Query: 1 MKFYIDDLPVLFPYPKIYPEQYNYMCDIKKTLDVGGNSILEMPSGTGKTVSLLSLTIAYQ 60 MK +D L V FPY IYPEQ++YM ++K+TLD G+ +LEMPSGTGKTVSLL+L +AYQ Sbjct: 1 MKLNVDGLLVYFPYDYIYPEQFSYMRELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAYQ 60 Query: 61 MHYP-EHRKIIYCSRTMSEIEKALVELENLMDYRTKELGYQEDFRGLGLTSRKNLCLHPE 119 YP E K+IYCSRT+ EIEK + EL L+++ K+ G + F GL L+SRKNLC+HPE Sbjct: 61 RAYPLEVTKLIYCSRTVPEIEKVIEELRKLLNFYEKQEGEKLPFLGLALSSRKNLCIHPE 120 Query: 120 VSKERKGTVVDEKCRRMTNGQAKRKLEEDPEANVELCEYHENLYNIEVEDYLPKGVFSFE 179 V+ R G VD KC +T + + + D ++ C ++E E LP G+++ + Sbjct: 121 VTPLRFGKDVDGKCHSLTASYVRAQYQHD--TSLPHCRFYEEFDAHGREVPLPAGIYNLD 178 Query: 180 KLLKYCEEKTLCPYFIVRRMISLCNIIIYSYHYLLDPKIAERVSNEVSKDSIVIFDEAHN 239 L + CPYF+ R I N+++YSYHYLLDPKIA+ VS E+++ ++V+FDEAHN Sbjct: 179 DLKALGRRQGWCPYFLARYSILHANVVVYSYHYLLDPKIADLVSKELARKAVVVFDEAHN 238 Query: 240 IDNVCIESLSLDLTTDALRRATRGANALDERISEVRKVDSQKLQDEYEKLVQGLHSADIL 299 IDNVCI+S+S++LT L R L + + +++ D Q+L+DEY +LV+GL A Sbjct: 239 IDNVCIDSMSVNLTRRTLDRCQGNLETLQKTVLRIKETDEQRLRDEYRRLVEGLREASA- 297 Query: 300 TDQEEPFVETPVLPQDLLTEAIPGNIRRAEHFVSFLKRLIEYLKTRMKVLHVISETPKSF 359 + + + PVLP ++L EA+PG+IR AEHF+ FL+RL+EY+K R++V HV+ E+P +F Sbjct: 298 ARETDAHLANPVLPDEVLQEAVPGSIRTAEHFLGFLRRLLEYVKWRLRVQHVVQESPPAF 357 Query: 360 LQHLKQLTFIERKPLRFCSERLSLLVRTLEVTEVEDFTALKDIATFATLISTYEEGFLLI 419 L L Q I+RKPLRFC+ERL L+ TLE+T++ DF+ L +A FATL+STY +GF +I Sbjct: 358 LSGLAQRVCIQRKPLRFCAERLRSLLHTLEITDLADFSPLTLLANFATLVSTYAKGFTII 417 Query: 420 IEPYEIENAAVPNPIMRFTCLDASIAIKPVFERFSSVIITSGTISPLDMYPRMLNFKTVL 479 IEP++ + NPI+ F+C+DAS+AIKPVFERF SVIITSGT+SPLD+YP++L+F V Sbjct: 418 IEPFDDRTPTIANPILHFSCMDASLAIKPVFERFQSVIITSGTLSPLDIYPKILDFHPVT 477 Query: 480 QKSYAMTLAKKSFLPMIITKGSDQVAISSRFEIRNDPSIVRNYGSMLVEFAKITPDGMVV 539 ++ MTLA+ PMII +G+DQVAISS+FE R D +++RNYG++L+E + + PDG+V Sbjct: 478 MATFTMTLARVCLCPMIIGRGNDQVAISSKFETREDIAVIRNYGNLLLEMSAVVPDGIVA 537 Query: 540 FFPSYLYMESIVSMWQTMGILDEVWKHKLILVETPDAQETSLALETYRKACSNGRGAILL 599 FF SY YMES V+ W GIL+ + ++KL+ +ET D ETS+ALE Y++AC NGRGAILL Sbjct: 538 FFTSYQYMESTVASWYEQGILENIQRNKLLFIETQDGAETSVALEKYQEACENGRGAILL 597 Query: 600 SVARGKVSEGIDFDHQYGRTVLMIGIPFQYTESRILKARLEFMRENYRIRENDFLSFDAM 659 SVARGKVSEGIDF H YGR V+M G+P+ YT+SRILKARLE++R+ ++IRENDFL+FDAM Sbjct: 598 SVARGKVSEGIDFVHHYGRAVIMFGVPYVYTQSRILKARLEYLRDQFQIRENDFLTFDAM 657 Query: 660 RHAAQCLGRVLRGKDDYGVMVLADRRFSR--KRSQLPKWIAQGLSDADLNLSTDMAISNT 717 RHAAQC+GR +RGK DYG+MV AD+RF+R KR +LP+WI + L+DA+LNL+ D + Sbjct: 658 RHAAQCVGRAIRGKTDYGLMVFADKRFARGDKRGKLPRWIQEHLTDANLNLTVDEGVQVA 717 Query: 718 KQFLRTMAQPTDPKD 732 K FLR MAQP +D Sbjct: 718 KYFLRQMAQPFHRED 732 >5H8W-A nrPDB Length = 597 Score = 609 bits (1570), Expect = e-174, Method: Composition-based stats. Identities = 147/705 (20%), Positives = 300/705 (42%), Gaps = 134/705 (19%) Query: 40 LEMPSGTGKTVSLLSLTIAYQMHYPEHRKIIYCSRTMSEIEKALVELENLMDYRTKELGY 99 LE P+G+GKT+ ++L A Q K++Y RT S+ E+ + EL + L Sbjct: 9 LESPTGSGKTI--MALKSALQYSSERKLKVLYLVRTNSQEEQVIKEL--------RSLSS 58 Query: 100 QEDFRGLGLTSRKNLC--------LHPEVSKERKGTVVDEKCRRMTNGQAKRKLEEDPEA 151 R + + R N+C LH E++ E + K R + G Sbjct: 59 TMKIRAIPMQGRVNMCILYRMVDDLH-EINAESLAKFCNMKKREVMAG------------ 105 Query: 152 NVELCEYHE-NLYNIEVEDYLPKGVFSFEKLLKYCEEKTLCPYFIVRRMISLCNIIIYSY 210 N C Y + + E + +L + + E+ Y E +CPY ++ + +I+I Y Sbjct: 106 NEAACPYFNFKIRSDETKRFLFDELPTAEEFYDYGERNNVCPYESMKAALPDADIVIAPY 165 Query: 211 HYLLDPKIAERVSNE--VSKDSIV-IFDEAHNIDNVCIESLSLDLTTDALRRATRGANAL 267 Y L+ +AE+ + VS++ IV I DEAHN+ ++ S ++ ++L RA R A A Sbjct: 166 AYFLNRSVAEKFLSHWGVSRNQIVIILDEAHNLPDIGRSIGSFRISVESLNRADREAQAY 225 Query: 268 DERISEVRKVDSQKLQDEYEKLVQGLHSADILTDQEEPFVETPVLPQDLLTEAI-PGNIR 326 + +L Q +H +D++ + + + Q +++E G++R Sbjct: 226 GD-----------------PELSQKIHVSDLIE-----MIRSAL--QSMVSERCGKGDVR 261 Query: 327 -RAEHFVSFL----KRLIEYLKTRMKVLHVISETPKSFLQHLKQLTFIERKPLRFCSERL 381 R + F+ ++ KR +++ + L++ E ++++ K+ + + P + S Sbjct: 262 IRFQEFMEYMRIMNKRSEREIRSLLNALYLFGE----YVENEKEK--VGKVPFSYAS--- 312 Query: 382 SLLVRTLEVTEVEDFTALKDIATFATLISTYEEGFLLIIEPYEIENAAVPNPIMRFTCLD 441 S+ R + ++ +D +A ++S + G+ M+ LD Sbjct: 313 SVASRIIAFSD-------QDEEKYAAILSPEDGGY------------------MQAAALD 347 Query: 442 ASIAIKPVFERFSSVIITSGTISPLDMYPRMLNFKTVLQKSYAMTLAKKSFLPMIITKGS 501 S ++ + E S I SGT+ P D Y + F+ +K + + ++ Sbjct: 348 PSGILEVLKE--SKTIHMSGTLDPFDFYSDITGFEIPFKKIGEIFPPENRYIAYY----- 400 Query: 502 DQVAISSRFEIRNDPSIVRNYGSMLVEFAKITPDGMVVFFPSYLYMESIVSMWQTMGILD 561 +SS+++ ++ + R +++ + +V+FPSY M+ + + + Sbjct: 401 --DGVSSKYDTLDEKELDR-MATVIEDIILKVKKNTIVYFPSYSLMDRV----ENRVSFE 453 Query: 562 EVWKHKLILVETPDAQETSLALETYRKACSNGRGAILLSVARGKVSEGIDFDHQYGRTVL 621 + +++ I D +E L+ +R+ G I +V+ G++SEGI+F ++ Sbjct: 454 HMKEYRGI-----DQKELYSMLKKFRR----DHGTI-FAVSGGRLSEGINFPGNELEMII 503 Query: 622 MIGIPFQYTESRILKARLEFMRENYRIRENDFLSFDAMRHAAQCLGRVLRGKDDYGVMVL 681 + G+PF ++ I ++ ++ Y + + Q +GR++R +D G V+ Sbjct: 504 LAGLPFPRPDA-INRSLFDYYCRKYGKGWEYSVVYPTAIKIRQEIGRLIRSAEDTGAAVI 562 Query: 682 ADRRFSRKRSQLPKWIAQGLSDADLNLSTDMAISNTKQFLRTMAQ 726 D+R + R +P D+ ++D A F+ A+ Sbjct: 563 LDKRAGQFRKFIP----------DMKKTSDPASDIYNFFISAQAR 597 >3CRV-A nrPDB Length = 551 Score = 212 bits (539), Expect = 6e-55, Method: Composition-based stats. Identities = 57/252 (22%), Positives = 114/252 (45%), Gaps = 32/252 (12%) Query: 443 SIAIKPVFERFSSVIITSGTISPLDMYPRMLNFK-TVLQKSYAMTLAKKSFLPMIITKGS 501 S + + + S+I+ SGT+ P + ++ K +L + K+ G Sbjct: 305 SYYLNLLNDNELSIILMSGTLPPREYMEKVWGIKRNMLYLDVEREIQKRVSGSYECYIG- 363 Query: 502 DQVAISSRFEIRNDPSIVRNYGSMLVEFAKITPDGMVVFFPSYLYMESIVSMWQTMGILD 561 V ++S++++R+D ++ + Y L++ ++V FPSY M+ ++S Sbjct: 364 --VDVTSKYDMRSD-NMWKRYADYLLKIYFQAKANVLVVFPSYEIMDRVMS--------- 411 Query: 562 EVWKHKLILVETPDAQETSLALETYRKACSNGRGAILLSVARGKVSEGIDF---DHQYGR 618 ++ L + +++++S+ E A S ++ SV +GK++EGI+ D Sbjct: 412 -----RISLPKYVESEDSSV--EDLYSAISANNKVLIGSVGKGKLAEGIELRNNDRSLIS 464 Query: 619 TVLMIGIPFQ----YTESRILKARLEFMRENYRIRENDFLSFDAMRHAAQCLGRVLRGKD 674 V+++GIP+ Y + + L+ REN E A+ Q +GR +R + Sbjct: 465 DVVIVGIPYPPPDDYLKILAQRVSLKMNREN----EEFLFKIPALVTIKQAIGRAIRDVN 520 Query: 675 DYGVMVLADRRF 686 D + L D+RF Sbjct: 521 DKCNVWLLDKRF 532 Score = 59.0 bits (141), Expect = 8e-09, Method: Composition-based stats. Identities = 58/303 (19%), Positives = 119/303 (39%), Gaps = 54/303 (17%) Query: 40 LEMPSGTGKTVSLLSLTIAYQMHYPEHRKIIYCSRTMSEIEKALVELENLMDYRTKELGY 99 L P+G+GKT L SL ++ ++ K+++ RT +E +L + + R + Sbjct: 27 LNAPTGSGKT--LFSLLVSLEV----KPKVLFVVRTHNEFYPIYRDLTKIREKRNITFSF 80 Query: 100 QEDFRGLGLTSRKNLCLHPEVSKERKGTVVDEKCRRMTNGQAKRKLEEDPEANVELCEYH 159 L + + CL+ E E + K + + K ++ P Sbjct: 81 --------LVGKPSSCLYAEKGAES--EDIPCKYCELKGSIVEVKTDDSP---------- 120 Query: 160 ENLYNIEVEDYLPKGVFSFEKLLKYCEEKTLCPYFIVRRMISLCNIIIYSYHYLLDPKIA 219 + +KL K + CPY+ + + ++I +Y Y + Sbjct: 121 ---------------LSLVKKLKKDGLQDKFCPYYSLLNSLYKADVIALTYPYFFIDRYR 165 Query: 220 ERVSNEVSKDSIVIFDEAHNIDNV------CIESLSLDLTTDALR--RATRGANALDERI 271 E + ++ ++ +++ DEAHN+D V + +++ + + + R + L ++ Sbjct: 166 EFIDIDL-REYMIVIDEAHNLDKVNELEERSLSEITIQMAIKQSKSEESRRILSKLLNQL 224 Query: 272 SEVRKVDSQKLQDE-YEKLVQGLHSADILTDQEEPFVETPVLPQDLLTEAIPGNIRRAEH 330 EV D + ++ E KL + +IL D E + L Q + + G+I R Sbjct: 225 REVVLPDEKYIKVENVPKLSK--EELEILADDYED-IRKDSLKQGKVNKIHIGSILRFFS 281 Query: 331 FVS 333 +S Sbjct: 282 LLS 284 >2VL7-A nrPDB Length = 540 Score = 193 bits (490), Expect = 3e-49, Method: Composition-based stats. Identities = 54/254 (21%), Positives = 109/254 (42%), Gaps = 40/254 (15%) Query: 457 IITSGTISPLDMYPRMLNFKTVLQKSYAMTLAKKSFLPMIITKGSDQVAISSRFEIRNDP 516 ++ SGT+ + ++K V+ +SY + + P ++S E+R Sbjct: 323 VLMSGTLP--ESLTLTNSYKIVVNESYGR--GEYYYCP----------NVTS--ELRKRN 366 Query: 517 SIVRNYGSMLVEFAKITPDGMVVFFPSYLYMESIVSMWQTMGILDEVWKHKLILVETPDA 576 S + Y +L + + ++VFFPSY +ES+ + +++E K + Sbjct: 367 SNIPIYSILLKRIYENSSKSVLVFFPSYEMLESVRIHLSGIPVIEENKKTR--------- 417 Query: 577 QETSLALETYRKACSNGRGAILLSVARGKVSEGIDFDHQYG--RTVLMIGIPFQYTESRI 634 E L L G+ ++L V R K SEG++F + ++++ G+P+ + Sbjct: 418 HEEVLEL------MKTGKYLVML-VMRAKESEGVEFREKENLFESLVLAGLPYPNVSDDM 470 Query: 635 LKARLEFMRENYRIRENDFLSFDAMRHAAQCLGRVLRGKDDYGVMVLADRRFSRKRSQLP 694 ++ R+E + + E+ + Q +GR R +DY + L D R+ + L Sbjct: 471 VRKRIERLSKLTGKDEDSIIHDLTAIVIKQTIGRAFRDPNDYVKIYLCDSRYREYFADL- 529 Query: 695 KWIAQGLSDADLNL 708 G+S+ ++ L Sbjct: 530 -----GISEKEIKL 538 Score = 53.7 bits (127), Expect = 3e-07, Method: Composition-based stats. Identities = 45/224 (20%), Positives = 86/224 (38%), Gaps = 26/224 (11%) Query: 82 ALVELENLMDYRTKELGYQEDFRGLGLTSRKNLCLHPEVSKERKGTVVDEKCRRMTNGQA 141 AL + L+ LG LG+ +K + + + + K + G Sbjct: 22 ALKHGKTLLLNAKPGLGKTVFVEVLGMQLKKKVLIFTRTHSQLDSIYKNAKLLGLKTGFL 81 Query: 142 KRKL---------EEDPEANVELCEYHENLYNIEVEDYLPKGVFSFEKLLKYCEEKTLCP 192 K EE E N C + + IE ++ K + F+ + Y CP Sbjct: 82 IGKSASCIYAQGDEEPDEINCSKCRLKDKIKTIEDKEP-SKLIEEFKDAVDY------CP 134 Query: 193 YFIVRRMISLCNIIIYSYHYLLDPKIAERVSNEVS-----KDSIVIFDEAHNIDNVCIES 247 Y+ +R + ++I +Y YL I V +D +++ DEAHN+ + Sbjct: 135 YYSLRANLKDKDVIAMTYPYLFQKPIRNSVFCNKDDCLKLEDYLIVIDEAHNLLE-ADKW 193 Query: 248 LSLDLTTDALRRATRGANALDERISEVRKVDSQKLQDEYEKLVQ 291 + ++ L RA + E + + ++D++K++D L+ Sbjct: 194 FTRKISRKMLERALKEI----EIVERLNRIDAKKVKDYINLLID 233 >6FWS-A nrPDB Length = 716 Score = 84.1 bits (206), Expect = 2e-16, Method: Composition-based stats. Identities = 123/676 (18%), Positives = 257/676 (38%), Gaps = 44/676 (6%) Query: 21 QYNYMCDIKKTL--DVGGNSILEMPSGTGKTVSLLSLTIAYQMHYPEHRKIIYCSRTMSE 78 Q + D+ KTL + G + +E P+G GKT+S L IA E + ++ + ++ Sbjct: 31 QRQMIADVAKTLAGEEGRHLAIEAPTGVGKTLSYLIPGIAIAR--EEQKTLVVSTANVAL 88 Query: 79 IEKALVELENLMDYRTKELGYQEDF-RGLGLTSRKNLCL-HPEVSKERKGTVVDEKCRRM 136 ++ + L+ +L + F RG + R L E +++ +D++ Sbjct: 89 QDQIYSKDLPLLKKIIPDLKFTAAFGRGRYVCPRNLTALASTEPTQQDLLAFLDDELTPN 148 Query: 137 TNGQAKRKLEEDPEANVELCEYHENLYNIEVEDYLPKGVFS--FEKLLKYCEEKTLCPYF 194 + KR + + + + + +I ++D L + + + L + C CP+F Sbjct: 149 NQEEQKRCAKLKGDLDTYKWDGLRDHTDIAIDDDLWRRLSTDKASCLNRNCYYYRECPFF 208 Query: 195 IVRRMISLCNIIIYSYHYLLDPKIAERVSNEVSKDSIVIFDEAHNIDNVCIESLSLDLTT 254 + RR I +++ ++ ++ +E V + K+ +++ DE H++ +V ++L + Sbjct: 209 VARREIQEAEVVVANHALVMAAMESEAVLPD-PKNLLLVLDEGHHLPDVARDALEMS--- 264 Query: 255 DALRRATRGANALDERISEVRKVDSQKLQDEYEKLVQGLHSADILTDQEEPFVETPVLPQ 314 A A ++ K+ + ++ K + L + L E E Sbjct: 265 -----AEITAPWYRLQLDLFTKLVATCMEQFRPKTIPPLAIPERLNAHCEELYELIASLN 319 Query: 315 DLLTEAIPGNIRRAEHFV--SFLKRLIEYLKTRMKVLHVISETPKSFLQHLKQLTFIERK 372 ++L +P F ++E + K+ ++ + FL L + T Sbjct: 320 NILNLYMPAGQEAEHRFAMGELPDEVLEICQRLAKLTEMLRGLAELFLNDLSEKTG---- 375 Query: 373 PLRFCSERLSLLVRTLEVTE-VEDFTALKDIATFATLISTYEEGFLLIIEPYEIENAAVP 431 + + L L++ + F A + A+L G + E Sbjct: 376 ----SHDIVRLHRLILQMNRALGMFEAQSKLWRLASL--AQSSGAPVTKWATREEREGQL 429 Query: 432 NPIMRFTCLDASIAIKPVFER-FSSVIITSGTISPLDMYPRMLNFKTVLQKSYAMTLAKK 490 + + S ++ + R +I+TS T+ L+ + R+ + +K+ +A Sbjct: 430 HLWFHCVGIRVSDQLERLLWRSIPHIIVTSATLRSLNSFSRLQEMSGLKEKAGDRFVALD 489 Query: 491 SFLPMIITKGSDQVAISSRFEIRNDPSIVRNYGSMLVEFAKITPD-GMVVFFPSYLYMES 549 S + I N+ + + E + GM+V F S M+ Sbjct: 490 SPFNHCEQGKIVIPRMRVEPSIDNEEQHIAEMAAFFREQVESKKHLGMLVLFASGRAMQR 549 Query: 550 IVSMWQTMGILDEVWKHKLILVETPDAQETSLALETYRKACSNGRGAILLSVARGKVSEG 609 LD V +L+L+ D +E +RK +NG ++L V +EG Sbjct: 550 ---------FLDYVTDLRLMLLVQGDQPR-YRLVELHRKRVANGERSVL--VGLQSFAEG 597 Query: 610 IDFDHQYGRTVLMIGIPFQYTESRILKARLEFMRENYRIRENDFLSFDAMRHAAQCLGRV 669 +D V + I F +S ++ E+++ R A + Q +GR+ Sbjct: 598 LDLKGDLLSQVHIHKIAFPPIDSPVVITEGEWLKSLNRYPFEVQSLPSASFNLIQQVGRL 657 Query: 670 LRGKDDYGVMVLADRR 685 +R +G +V+ D+R Sbjct: 658 IRSHGCWGEVVIYDKR 673 >4JLV-A nrPDB Length = 269 Score = 38.2 bits (87), Expect = 0.015, Method: Composition-based stats. Identities = 15/85 (17%), Positives = 26/85 (30%), Gaps = 3/85 (3%) Query: 591 SNGRGAILLSVARGKVSEGIDFDHQYGRTVLMIGIPFQYTESRILKARLEFMRENYRIRE 650 N G L + R +SE I +L G I R + + + + R Sbjct: 133 QNNNGLSSLIIGRTTMSEAITSTEIENLDLLTAGPVPPNPSELIGSERFKELVDLFNKRY 192 Query: 651 NDFLSFD---AMRHAAQCLGRVLRG 672 + + AQ R ++ Sbjct: 193 DIIIVDTPPVNTVTDAQLYARAIKD 217 >2XZL-A nrPDB Length = 802 Score = 34.0 bits (76), Expect = 0.28, Method: Composition-based stats. Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 5/93 (5%) Query: 38 SILEMPSGTGKTVSLLSLTIAYQMHYPEHRKIIYCSRTMSEIEKALVELENLMDYRTKEL 97 S+++ P GTGKTV+ S TI Y + +I+ C+ + ++ +L +L K + Sbjct: 378 SLIQGPPGTGKTVT--SATIVYHLSKIHKDRILVCAPSNVAVDHLAAKLRDL---GLKVV 432 Query: 98 GYQEDFRGLGLTSRKNLCLHPEVSKERKGTVVD 130 R +S NL LH V + KG + + Sbjct: 433 RLTAKSREDVESSVSNLALHNLVGRGAKGELKN 465 >1A0P-A nrPDB Length = 290 Score = 33.6 bits (75), Expect = 0.34, Method: Composition-based stats. Identities = 28/143 (19%), Positives = 47/143 (32%), Gaps = 10/143 (6%) Query: 211 HYLLDPKIAERVSNEVSKDSIVIFDEAHNIDNVCIESLSLDLTTDALRRATRGANALDER 270 L+ +AE N +D ++ + H+ + S DL R G A Sbjct: 12 ALWLEKNLAENTLNAYRRDLSMMVEWLHHRGLTLATAQSDDLQALLAERLEGGYKA---- 67 Query: 271 ISEVRKVDSQKLQDEYEKLVQGLHSADILTDQEEPFVETPVLPQDLLTEAIPGNIRRAEH 330 S +L +L Q L+ D + +P LPQ L + + R Sbjct: 68 ------TSSARLLSAVRRLFQYLYREKFREDDPSAHLASPKLPQRLPKDLSEAQVERLLQ 121 Query: 331 FVSFLKRLIEYLKTRMKVLHVIS 353 + L K ++VL+ Sbjct: 122 APLIDQPLELRDKAMLEVLYATG 144 >2WJV-A nrPDB Length = 800 Score = 32.1 bits (71), Expect = 0.95, Method: Composition-based stats. Identities = 28/122 (22%), Positives = 51/122 (41%), Gaps = 17/122 (13%) Query: 38 SILEMPSGTGKTVSLLSLTIAYQMHYPEHRKIIYCSRTMSEIEKALVELE-------NLM 90 S+++ P GTGKTV+ S TI Y + + ++ C+ + +++ ++ L Sbjct: 374 SLIQGPPGTGKTVT--SATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLC 431 Query: 91 DYRTKELGYQEDFRGLGLTSRKNLCLHPEVSKERKGTV-------VDEKCRRMTNGQAKR 143 + + F L R N+ PE+ K ++ DEK R A+R Sbjct: 432 AKSREAIDSPVSFLALHNQIR-NMDSMPELQKLQQLKDETGELSSADEKRYRALKRTAER 490 Query: 144 KL 145 +L Sbjct: 491 EL 492 >6EJ5-A nrPDB Length = 637 Score = 32.1 bits (71), Expect = 0.98, Method: Composition-based stats. Identities = 28/122 (22%), Positives = 51/122 (41%), Gaps = 17/122 (13%) Query: 38 SILEMPSGTGKTVSLLSLTIAYQMHYPEHRKIIYCSRTMSEIEKALVELE-------NLM 90 S+++ P GTGKTV+ S TI Y + + ++ C+ + +++ ++ L Sbjct: 211 SLIQGPPGTGKTVT--SATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLC 268 Query: 91 DYRTKELGYQEDFRGLGLTSRKNLCLHPEVSKERKGTV-------VDEKCRRMTNGQAKR 143 + + F L R N+ PE+ K ++ DEK R A+R Sbjct: 269 AKSREAIDSPVSFLALHNQIR-NMDSMPELQKLQQLKDETGELSSADEKRYRALKRTAER 327 Query: 144 KL 145 +L Sbjct: 328 EL 329 >5BN5-A nrPDB Length = 570 Score = 30.9 bits (68), Expect = 1.9, Method: Composition-based stats. Identities = 30/113 (26%), Positives = 49/113 (43%), Gaps = 13/113 (11%) Query: 9 PVLFPYPKIYPEQYNY-------MCDIKKTLDVGGNSILEMPSGTGKTVSLLSLTIAYQM 61 P+ P P YNY + DI + GG++ + P G+GKTV L+ IA + Sbjct: 183 PIRKPRPYKEKLDYNYPFITGTRVLDIMFPIAKGGSAAVPGPFGSGKTV--LNQQIA-KW 239 Query: 62 HYPEHRKIIYCSRTMSEIEKALVELENLMDYRTKELGYQEDFRGLGLTSRKNL 114 + I C +E+ + L E L D +T G +R + + + N+ Sbjct: 240 ADSDIVIYIGCGERGNEMTEVLEEFPKLKDPKT---GKPLMYRTILIANTSNM 289 >4UAO-A nrPDB Length = 370 Score = 30.9 bits (68), Expect = 2.0, Method: Composition-based stats. Identities = 12/79 (15%), Positives = 26/79 (32%), Gaps = 2/79 (2%) Query: 119 EVSKERKGTVVDEKCRRMTNGQAKRKLEEDPEANVELCE-YHENLYNIEVEDYLPKGVFS 177 EV + + R+ EE+ ++ E + +N ++ +LP G F+ Sbjct: 233 EVEARSL-RECNRIVFEASASDQPRQYEEELTDYEKIQEGFRQNNRDMIKSAFLPVGAFN 291 Query: 178 FEKLLKYCEEKTLCPYFIV 196 + + V Sbjct: 292 SDNFKSKGRGYNWANFDSV 310 >4A2W-A nrPDB Length = 936 Score = 30.9 bits (68), Expect = 2.0, Method: Composition-based stats. Identities = 15/61 (24%), Positives = 32/61 (52%), Gaps = 2/61 (3%) Query: 23 NYMCDIKKTLDVGGNSILEMPSGTGKT-VSLLSLTIAYQ-MHYPEHRKIIYCSRTMSEIE 80 +Y ++ + G N+++ P+G+GKT VS+L +Q M K+++ + + E Sbjct: 251 SYQIELAQPAINGKNALICAPTGSGKTFVSILICEHHFQNMPAGRKAKVVFLATKVPVYE 310 Query: 81 K 81 + Sbjct: 311 Q 311 >4A36-A nrPDB Length = 556 Score = 30.9 bits (68), Expect = 2.1, Method: Composition-based stats. Identities = 15/61 (24%), Positives = 32/61 (52%), Gaps = 2/61 (3%) Query: 23 NYMCDIKKTLDVGGNSILEMPSGTGKT-VSLLSLTIAYQ-MHYPEHRKIIYCSRTMSEIE 80 +Y ++ + G N+++ P+G+GKT VS+L +Q M K+++ + + E Sbjct: 10 SYQIELAQPAINGKNALICAPTGSGKTFVSILICEHHFQNMPAGRKAKVVFLATKVPVYE 69 Query: 81 K 81 + Sbjct: 70 Q 70 >4A2Q-A nrPDB Length = 797 Score = 30.9 bits (68), Expect = 2.1, Method: Composition-based stats. Identities = 15/61 (24%), Positives = 32/61 (52%), Gaps = 2/61 (3%) Query: 23 NYMCDIKKTLDVGGNSILEMPSGTGKT-VSLLSLTIAYQ-MHYPEHRKIIYCSRTMSEIE 80 +Y ++ + G N+++ P+G+GKT VS+L +Q M K+++ + + E Sbjct: 251 SYQIELAQPAINGKNALICAPTGSGKTFVSILICEHHFQNMPAGRKAKVVFLATKVPVYE 310 Query: 81 K 81 + Sbjct: 311 Q 311 >3L4G-A nrPDB Length = 508 Score = 30.5 bits (67), Expect = 2.5, Method: Composition-based stats. Identities = 13/57 (22%), Positives = 29/57 (50%), Gaps = 4/57 (7%) Query: 9 PVLFPYPKIYPEQYNYMCDIKKTLDVGGNSILE----MPSGTGKTVSLLSLTIAYQM 61 P PY + E ++Y +KK ++VG + + +P G + VS+++ ++ + Sbjct: 407 PAYNPYTEPSMEVFSYHQGLKKWVEVGNSGVFRPEMLLPMGLPENVSVIAWGLSLER 463 >3WFO-A nrPDB Length = 525 Score = 30.5 bits (67), Expect = 2.5, Method: Composition-based stats. Identities = 23/86 (26%), Positives = 40/86 (46%), Gaps = 3/86 (3%) Query: 261 TRGANALDERISEVRKVDSQKLQDEYEK-LVQGLHSADILTDQEEPFVETPVLPQDLLTE 319 AL E I+E+ + ++++E +K L+ G +IL + V +L + LL Sbjct: 426 EEDIKALMETIAELESFNRNEMKEEIQKPLLNGDEIMEILGIKPGKIV--GILKKALLEA 483 Query: 320 AIPGNIRRAEHFVSFLKRLIEYLKTR 345 I G + E + F+KR + LK Sbjct: 484 QIDGKVETKEEAIEFIKRSTKNLKPL 509 >3NFY-A nrPDB Length = 267 Score = 30.5 bits (67), Expect = 2.9, Method: Composition-based stats. Identities = 14/62 (22%), Positives = 21/62 (33%), Gaps = 7/62 (11%) Query: 142 KRKLEEDPEANVELCEYHENLYNIEV----EDYLPKGVFSFEKLLKYCEEKTLCPYFIVR 197 +R P E Y++ +YN + L + E L E L PY+ R Sbjct: 116 RRSYNVTPPPIEESHPYYQEIYNDRRYKVCDVPL-DQLPRSESLKDVLER--LLPYWNER 172 Query: 198 RM 199 Sbjct: 173 IA 174 >4MMI-A nrPDB Length = 643 Score = 30.2 bits (66), Expect = 3.7, Method: Composition-based stats. Identities = 13/48 (27%), Positives = 21/48 (43%) Query: 632 SRILKARLEFMRENYRIRENDFLSFDAMRHAAQCLGRVLRGKDDYGVM 679 KA L + RE + RE DF + + Q + +V R D ++ Sbjct: 33 DDAAKALLAYYREKSKAREPDFSNAEKPADIRQPIDKVTREMADKALV 80 >5NQD-A nrPDB Length = 843 Score = 29.8 bits (65), Expect = 4.7, Method: Composition-based stats. Identities = 26/133 (19%), Positives = 46/133 (34%), Gaps = 5/133 (3%) Query: 212 YLLDPKIAERVSNEVSKDSIVIFDEAHNIDNVCIESLSLDLTTDALRRATRGANALDERI 271 Y L+ I + K ++ +E H + I +T +A + N L I Sbjct: 245 YFLNHWIPNLRGESLGKKKELMPEEPHEAGRIIIVDPRRTVTVNACEQTAGADNVLHLAI 304 Query: 272 SEVRKVDSQKLQDEYEKLV-QGLHSADILTDQE--EPFVETPVLPQDLLTEAIPGNIRRA 328 + D + + +G D + E P+ P ++EA PG++ Sbjct: 305 NS--GTDLALFNALFTYIADKGWVDRDFIDKSTLREGTARPPLYPARGVSEANPGHLSSF 362 Query: 329 EHFVSFLKRLIEY 341 E V + IE Sbjct: 363 EDAVEGCRMSIEE 375 >3HDH-A nrPDB Length = 302 Score = 29.4 bits (64), Expect = 6.5, Method: Composition-based stats. Identities = 30/186 (16%), Positives = 69/186 (37%), Gaps = 38/186 (20%) Query: 333 SFLKRLIEYLKTRMKVLHVISETP---KSFLQHLKQLTFIERKPLRFCSERLSLLVRT-- 387 F+++ + + T V+ T ++ +++LK + + ++ +F +E T Sbjct: 79 EFVEKTLSSISTSTDAASVVHSTDLVVEAIVENLKVKSELFKRLDKFAAEHTIFASNTSS 138 Query: 388 LEVTEVEDFTALKDIATFATLISTYEEGFLLIIEPYEIENAAVPNPIMRFTCLDASIAIK 447 L++T + + T +D FA L + P P+M+ ++ Sbjct: 139 LQITSLANATTRQD--RFAGL------------------HFFNPVPLMK--------LVE 170 Query: 448 PVFERFSSVIITSGTISPLDMYPRMLNFKTVLQKSYAMTLAKKSFLPMIITKGS-DQVAI 506 V +S T+ L + + L V K + + +P +I + Sbjct: 171 VVKTPMTS----QKTLESLVDFSKTLGKHPVSCKDTPGFIVNRLLVPYLIEAVRLYERGD 226 Query: 507 SSRFEI 512 +S+ +I Sbjct: 227 ASKEDI 232 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.311 0.123 0.303 Lambda K H 0.267 0.0378 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 25,032,999 Number of Sequences: 36641 Number of extensions: 921561 Number of successful extensions: 3133 Number of sequences better than 10.0: 28 Number of HSP's better than 10.0 without gapping: 14 Number of HSP's successfully gapped in prelim test: 37 Number of HSP's that attempted gapping in prelim test: 3050 Number of HSP's gapped (non-prelim): 70 length of query: 778 length of database: 10,336,785 effective HSP length: 105 effective length of query: 673 effective length of database: 6,489,480 effective search space: 4367420040 effective search space used: 4367420040 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.4 bits) S2: 63 (29.0 bits)