BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= P06780 (209 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 3A58-B nrPDB 385 e-108 5ZVP-A nrPDB 302 6e-83 5C2K-A nrPDB 286 6e-78 5ZHX-e nrPDB 282 7e-77 5JCP-B nrPDB 278 8e-76 2FV8-A nrPDB 266 4e-72 3TH5-A nrPDB 213 5e-56 2J1L-A nrPDB 212 9e-56 3RYT-C nrPDB 210 3e-55 2WKQ-A nrPDB 207 2e-54 2W2X-A nrPDB 203 4e-53 1RYH-A nrPDB 201 2e-52 3VHL-B nrPDB 200 3e-52 5VCU-A nrPDB 199 6e-52 4MIT-A nrPDB 197 4e-51 1M7B-A nrPDB 196 6e-51 1GWN-A nrPDB 196 9e-51 2ATX-A nrPDB 191 2e-49 2WBL-C nrPDB 184 2e-47 2NTY-C nrPDB 184 3e-47 3BWD-D nrPDB 183 5e-47 2J0V-A nrPDB 173 5e-44 4U5X-A nrPDB 172 1e-43 2REX-B nrPDB 171 2e-43 3REG-A nrPDB 166 4e-42 2Q3H-A nrPDB 166 1e-41 5HZH-A nrPDB 154 2e-38 1YZU-A nrPDB 96 1e-20 2G6B-A nrPDB 93 9e-20 1EK0-A nrPDB 91 5e-19 2RHD-A nrPDB 90 5e-19 2OCB-A nrPDB 89 1e-18 4QXA-A nrPDB 89 2e-18 1WMS-A nrPDB 89 2e-18 6IF2-B nrPDB 87 6e-18 1TU4-A nrPDB 86 1e-17 5LEF-A nrPDB 85 3e-17 2FFQ-A nrPDB 84 3e-17 4G01-B nrPDB 84 5e-17 5CM8-B nrPDB 84 5e-17 4M8N-E nrPDB 84 6e-17 5SZH-B nrPDB 82 1e-16 4KLZ-A nrPDB 82 1e-16 5SZI-A nrPDB 82 2e-16 4LHX-A nrPDB 82 2e-16 4RKF-A nrPDB 81 3e-16 2P5S-A nrPDB 81 3e-16 2WWX-A nrPDB 81 3e-16 3L0I-B nrPDB 81 3e-16 4DXA-A nrPDB 80 4e-16 5LDD-C nrPDB 80 5e-16 6O62-A nrPDB 80 7e-16 2GIL-A nrPDB 80 7e-16 1Z0A-A nrPDB 80 8e-16 4KYI-B nrPDB 79 1e-15 5LPN-A nrPDB 79 1e-15 3CPH-A nrPDB 79 2e-15 5SZJ-A nrPDB 79 2e-15 2GF0-A nrPDB 78 2e-15 2A5J-A nrPDB 78 2e-15 3DZ8-A nrPDB 78 2e-15 2OCY-C nrPDB 78 3e-15 2GF9-A nrPDB 78 3e-15 2HEI-A nrPDB 77 4e-15 5YOZ-A nrPDB 77 4e-15 1D5C-A nrPDB 77 5e-15 3RAB-A nrPDB 77 6e-15 2HUP-A nrPDB 76 8e-15 2IL1-A nrPDB 76 9e-15 2EW1-A nrPDB 76 1e-14 1Z22-A nrPDB 76 1e-14 3CUE-F nrPDB 76 1e-14 2KE5-A nrPDB 76 1e-14 4FMC-F nrPDB 75 2e-14 1YZN-A nrPDB 74 4e-14 1X3S-A nrPDB 74 5e-14 2F9L-A nrPDB 74 6e-14 4KU4-A nrPDB 74 6e-14 1ZC4-A nrPDB 74 7e-14 1ZBD-A nrPDB 74 7e-14 2N1B-A nrPDB 73 8e-14 5UWI-A nrPDB 73 9e-14 5CLL-A nrPDB 73 9e-14 2ERX-A nrPDB 72 1e-13 4RKE-A nrPDB 72 1e-13 5XOJ-A nrPDB 72 2e-13 1Z0F-A nrPDB 71 4e-13 3WYF-A nrPDB 70 4e-13 5FBL-B nrPDB 70 5e-13 1Z06-A nrPDB 70 5e-13 2G77-B nrPDB 70 7e-13 4PHF-A nrPDB 69 1e-12 6HUF-A nrPDB 69 2e-12 3T5G-A nrPDB 69 2e-12 2F7S-A nrPDB 68 2e-12 4UJ4-A nrPDB 68 3e-12 5UB8-A nrPDB 68 3e-12 3BC1-A nrPDB 68 3e-12 2ERY-A nrPDB 67 5e-12 2IEY-A nrPDB 67 7e-12 2FG5-A nrPDB 67 7e-12 2IEZ-A nrPDB 66 8e-12 2ATV-A nrPDB 66 9e-12 3CPJ-B nrPDB 65 2e-11 6IYB-A nrPDB 65 2e-11 3OES-A nrPDB 64 4e-11 5XR6-A nrPDB 64 5e-11 5WDQ-A nrPDB 61 3e-10 5WDR-A nrPDB 60 5e-10 3BFK-A nrPDB 60 5e-10 2FN4-A nrPDB 60 8e-10 2BMD-A nrPDB 60 1e-09 1YVD-A nrPDB 58 3e-09 4WA7-A nrPDB 57 5e-09 3RAP-R nrPDB 57 8e-09 2O52-A nrPDB 56 1e-08 3CON-A nrPDB 55 2e-08 5UHV-A nrPDB 55 3e-08 3RWM-B nrPDB 55 3e-08 3PIR-A nrPDB 53 9e-08 4DJT-A nrPDB 52 2e-07 6FF8-A nrPDB 52 3e-07 4CZ2-A nrPDB 51 3e-07 3TSO-A nrPDB 51 5e-07 3E5H-A nrPDB 50 7e-07 3CBQ-A nrPDB 48 3e-06 3CLV-A nrPDB 47 5e-06 5XC3-A nrPDB 47 5e-06 3C5C-A nrPDB 46 1e-05 2AL7-A nrPDB 43 9e-05 3D6T-B nrPDB 43 1e-04 3Q85-A nrPDB 42 1e-04 2NZJ-A nrPDB 42 2e-04 5C1S-A nrPDB 40 7e-04 4ILE-A nrPDB 39 0.002 2CJW-A nrPDB 39 0.002 2G3Y-A nrPDB 39 0.002 4YLG-A nrPDB 35 0.017 3LRP-A nrPDB 35 0.017 2H16-A nrPDB 35 0.024 3DPU-A nrPDB 33 0.061 2YC4-C nrPDB 32 0.18 3Q72-A nrPDB 31 0.35 3CB4-D nrPDB 31 0.48 6HLU-A nrPDB 30 0.54 6DQW-A nrPDB 30 0.73 5YMX-A nrPDB 30 0.76 3J4J-A nrPDB 30 0.89 4KJZ-A nrPDB 30 1.0 4B44-A nrPDB 30 1.1 4WNR-A nrPDB 29 1.7 5XW2-A nrPDB 28 2.9 2DYK-A nrPDB 28 2.9 5HXT-A nrPDB 27 5.1 2QAG-A nrPDB 27 6.9 5X5J-A nrPDB 27 7.4 3WKX-A nrPDB 27 7.8 3FTQ-A nrPDB 27 8.6 2YWH-A nrPDB 26 9.4 >3A58-B nrPDB Length = 188 Score = 385 bits (989), Expect = e-108, Method: Compositional matrix adjust. Identities = 187/188 (99%), Positives = 187/188 (99%) Query: 1 MSQQVGNSIRRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVEL 60 MSQQVGNSIRRKLVIVGDGACGKTCLLIV SKGQFPEVYVPTVFENYVADVEVDGRRVEL Sbjct: 1 MSQQVGNSIRRKLVIVGDGACGKTCLLIVNSKGQFPEVYVPTVFENYVADVEVDGRRVEL 60 Query: 61 ALWDTAGQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVPIILV 120 ALWDTAGQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVPIILV Sbjct: 61 ALWDTAGQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVPIILV 120 Query: 121 GCKVDLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAAT 180 GCKVDLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAAT Sbjct: 121 GCKVDLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAAT 180 Query: 181 RASLMGKS 188 RASLMGKS Sbjct: 181 RASLMGKS 188 >5ZVP-A nrPDB Length = 181 Score = 302 bits (774), Expect = 6e-83, Method: Compositional matrix adjust. Identities = 141/177 (79%), Positives = 160/177 (90%) Query: 9 IRRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDTAGQ 68 IRRKLVIVGDGACGKTCLLIV SKG FPEVYVPTVFENYVADVEVDG+ VELALWDTAGQ Sbjct: 4 IRRKLVIVGDGACGKTCLLIVNSKGTFPEVYVPTVFENYVADVEVDGKHVELALWDTAGQ 63 Query: 69 EDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVPIILVGCKVDLRN 128 EDYDRLRPLSYPDS+V+LICF+ID PDSL+NVQEKWI+EVLHFCQG+PIILVGCK DLR+ Sbjct: 64 EDYDRLRPLSYPDSHVILICFAIDSPDSLDNVQEKWISEVLHFCQGLPIILVGCKKDLRH 123 Query: 129 DPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRASLM 185 DP+TIE+L + Q+PVT ++G+ V +IGA Y ECSA+T GVREVFEAATRA+L+ Sbjct: 124 DPKTIEELHKTSQKPVTPEQGEEVRKKIGAYKYLECSARTNEGVREVFEAATRAALL 180 >5C2K-A nrPDB Length = 415 Score = 286 bits (731), Expect = 6e-78, Method: Compositional matrix adjust. Identities = 138/202 (68%), Positives = 160/202 (79%), Gaps = 11/202 (5%) Query: 8 SIRRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDTAG 67 +IR+KLVIVGDGACGKTCLLIVFSK QFPEVYVPTVFENYVAD+EVDG++VELALWDTAG Sbjct: 10 AIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAG 69 Query: 68 QEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVPIILVGCKVDLR 127 QEDYDRLRPLSYPD++V+L+CFSID PDSLEN+ EKW EV HFC VPIILVG K DLR Sbjct: 70 QEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLR 129 Query: 128 NDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRASLMGK 187 ND T +L + Q+PV +EG+ +A++IGA GY ECSAKT GVREVFE ATRA+L + Sbjct: 130 NDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQAR 189 Query: 188 SKTNGKAKKNTTEKKKKKCVLL 209 KKK C++L Sbjct: 190 RG-----------KKKSGCLVL 200 >5ZHX-e nrPDB Length = 198 Score = 282 bits (722), Expect = 7e-77, Method: Compositional matrix adjust. Identities = 133/180 (73%), Positives = 153/180 (85%) Query: 8 SIRRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDTAG 67 +IR+KLVIVGDGACGKTCLLIVFSK QFPEVYVPTVFENYVAD+EVDG++VELALWDTAG Sbjct: 8 AIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAG 67 Query: 68 QEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVPIILVGCKVDLR 127 QEDYDRLRPLSYPD++V+L+CFSID PDSLEN+ EKW EV HFC VPIILVG K DLR Sbjct: 68 QEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLR 127 Query: 128 NDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRASLMGK 187 ND T +L + Q+PV +EG+ +A++IGA GY ECSAKT GVREVFE ATRA+L + Sbjct: 128 NDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQAR 187 >5JCP-B nrPDB Length = 419 Score = 278 bits (712), Expect = 8e-76, Method: Compositional matrix adjust. Identities = 132/177 (74%), Positives = 151/177 (85%) Query: 8 SIRRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDTAG 67 +IR+KLVIVGDGACGKTCLLIV SK QFPEVYVPTVFENYVAD+EVDG++VELALWDTAG Sbjct: 241 AIRKKLVIVGDGACGKTCLLIVNSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAG 300 Query: 68 QEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVPIILVGCKVDLR 127 QEDYDRLRPLSYPD++V+L+CFSID PDSLEN+ EKW EV HFC VPIILVG K DLR Sbjct: 301 QEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLR 360 Query: 128 NDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRASL 184 ND T +L + Q+PV +EG+ +A++IGA GY ECSAKT GVREVFE ATRA+L Sbjct: 361 NDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAAL 417 >2FV8-A nrPDB Length = 207 Score = 266 bits (680), Expect = 4e-72, Method: Compositional matrix adjust. Identities = 124/179 (69%), Positives = 149/179 (83%) Query: 9 IRRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDTAGQ 68 IR+KLV+VGDGACGKTCLLIVFSK +FPEVYVPTVFENYVAD+EVDG++VELALWDTAGQ Sbjct: 24 IRKKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQ 83 Query: 69 EDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVPIILVGCKVDLRN 128 EDYDRLRPLSYPD++V+L+CFS+D PDSLEN+ EKW+ EV HFC VPIILV K DLR+ Sbjct: 84 EDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPNVPIILVANKKDLRS 143 Query: 129 DPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRASLMGK 187 D +L + Q+PV + +G+++A +I A Y ECSAKT GVREVFE ATRA+L + Sbjct: 144 DEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAALQKR 202 >3TH5-A nrPDB Length = 204 Score = 213 bits (542), Expect = 5e-56, Method: Compositional matrix adjust. Identities = 101/173 (58%), Positives = 126/173 (72%) Query: 12 KLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDTAGQEDY 71 K V+VGDGA GKTCLLI ++ FP Y+PTVF+NY A+V VDG+ V L LWDTAGQEDY Sbjct: 32 KCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAGQEDY 91 Query: 72 DRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVPIILVGCKVDLRNDPQ 131 DRLRPLSYP ++V LICFS+ P S ENV+ KW EV H C PIILVG K+DLR+D Sbjct: 92 DRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCPNTPIILVGTKLDLRDDKD 151 Query: 132 TIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRASL 184 TIE+L+++ P+T +G ++A +IGA Y ECSA T G++ VF+ A RA L Sbjct: 152 TIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQRGLKTVFDEAIRAVL 204 >2J1L-A nrPDB Length = 214 Score = 212 bits (540), Expect = 9e-56, Method: Compositional matrix adjust. Identities = 92/179 (51%), Positives = 125/179 (69%) Query: 12 KLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDTAGQEDY 71 K+V+VGDG CGKT LL+VF+ G FPE Y PTVFE Y+ +++V G+ V L +WDTAGQ+DY Sbjct: 36 KVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQDDY 95 Query: 72 DRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVPIILVGCKVDLRNDPQ 131 DRLRPL YPD++V+L+CF + P+S +N+ +W EV HFC+ VPII+VGCK DLR D Sbjct: 96 DRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTDLRKDKS 155 Query: 132 TIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRASLMGKSKT 190 + +LR+ G +PVT GQ +A +GA Y ECSA+ V VF+ A +L + + Sbjct: 156 LVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVALSSRGRN 214 >3RYT-C nrPDB Length = 180 Score = 210 bits (535), Expect = 3e-55, Method: Compositional matrix adjust. Identities = 100/173 (57%), Positives = 125/173 (72%) Query: 12 KLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDTAGQEDY 71 K V+VGDGA GKTCLLI ++ FP Y+PTVF+NY A+V VDG+ V L LWDTAG EDY Sbjct: 8 KCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAGLEDY 67 Query: 72 DRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVPIILVGCKVDLRNDPQ 131 DRLRPLSYP ++V LICFS+ P S ENV+ KW EV H C PIILVG K+DLR+D Sbjct: 68 DRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCPNTPIILVGTKLDLRDDKD 127 Query: 132 TIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRASL 184 TIE+L+++ P+T +G ++A +IGA Y ECSA T G++ VF+ A RA L Sbjct: 128 TIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQRGLKTVFDEAIRAVL 180 >2WKQ-A nrPDB Length = 332 Score = 207 bits (528), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 98/173 (56%), Positives = 124/173 (71%) Query: 12 KLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDTAGQEDY 71 K V+VGDGA GKTCLLI ++ FP Y+PTVF+NY A+V VDG+ V L LWDTAG EDY Sbjct: 157 KCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAGLEDY 216 Query: 72 DRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVPIILVGCKVDLRNDPQ 131 DRLRPLSYP ++V LICFS+ P S +V+ KW EV H C PIILVG K+DLR+D Sbjct: 217 DRLRPLSYPQTDVFLICFSLVSPASFHHVRAKWYPEVRHHCPNTPIILVGTKLDLRDDKD 276 Query: 132 TIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRASL 184 TIE+L+++ P+T +G ++A +IGA Y ECSA T G++ VF+ A RA L Sbjct: 277 TIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQRGLKTVFDEAIRAVL 329 >2W2X-A nrPDB Length = 185 Score = 203 bits (517), Expect = 4e-53, Method: Compositional matrix adjust. Identities = 99/179 (55%), Positives = 125/179 (69%) Query: 6 GNSIRRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDT 65 G S K V+VGD A GKTCLLI ++ FP Y+PTVF+NY A+V VD + V L LWDT Sbjct: 5 GGSQAIKCVVVGDVAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDSKPVNLGLWDT 64 Query: 66 AGQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVPIILVGCKVD 125 AGQEDYDRLRPLSYP ++V LICFS+ P S ENV+ KW EV H C PIILVG K+D Sbjct: 65 AGQEDYDRLRPLSYPQTDVFLICFSLVSPASYENVRAKWFPEVRHHCPSTPIILVGTKLD 124 Query: 126 LRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRASL 184 LR+D TIE+L+++ P+T +G ++A +I + Y ECSA T G++ VF+ A RA L Sbjct: 125 LRDDKDTIEKLKEKKLAPITYPQGLALAKEIDSVKYLECSALTQRGLKTVFDEAIRAVL 183 >1RYH-A nrPDB Length = 203 Score = 201 bits (511), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 101/192 (52%), Positives = 126/192 (65%), Gaps = 19/192 (9%) Query: 12 KLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDTAGQEDY 71 K V+VGDGA GKTCLLI ++ FP Y+PTVF+NY A+V VDG+ V L LWDTAGQEDY Sbjct: 7 KCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAGQEDY 66 Query: 72 DRLRPLSYPDS-------------------NVVLICFSIDLPDSLENVQEKWIAEVLHFC 112 DRLRPLSYP + +V LICFS+ P S ENV+ KW EV H C Sbjct: 67 DRLRPLSYPQTVGETYGKDITSRGKDKPIADVFLICFSLVSPASFENVRAKWYPEVRHHC 126 Query: 113 QGVPIILVGCKVDLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGV 172 PIILVG K+DLR+D TIE+L+++ P+T +G ++A +IGA Y ECSA T G+ Sbjct: 127 PNTPIILVGTKLDLRDDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQRGL 186 Query: 173 REVFEAATRASL 184 + VF+ A RA L Sbjct: 187 KTVFDEAIRAVL 198 >3VHL-B nrPDB Length = 195 Score = 200 bits (509), Expect = 3e-52, Method: Compositional matrix adjust. Identities = 90/173 (52%), Positives = 120/173 (69%) Query: 12 KLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDTAGQEDY 71 K V+VGDGA GK CLLI ++ +FP YVPTVF+NY V + G L L+DTAGQEDY Sbjct: 12 KCVVVGDGAVGKNCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDY 71 Query: 72 DRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVPIILVGCKVDLRNDPQ 131 DRLRPLSYP ++V L+CFS+ P S ENV+EKW+ E+ H C P +LVG ++DLR+DP Sbjct: 72 DRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLRDDPS 131 Query: 132 TIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRASL 184 TIE+L + Q+P+T + + +A + A Y ECSA T G++ VF+ A A+L Sbjct: 132 TIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAAL 184 >5VCU-A nrPDB Length = 208 Score = 199 bits (507), Expect = 6e-52, Method: Compositional matrix adjust. Identities = 97/198 (48%), Positives = 132/198 (66%), Gaps = 2/198 (1%) Query: 12 KLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDTAGQEDY 71 K V+VGDGA GKT LLI +S G FPE YVPTVF+NY ++ V +AL+DTAGQEDY Sbjct: 13 KCVVVGDGAVGKTALLIAYSSGCFPEDYVPTVFDNYNKNIPYGDGIVSIALYDTAGQEDY 72 Query: 72 DRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVPIILVGCKVDLRNDPQ 131 DRLRPLSYPD++V L+CFS++ P+SLEN KW E+ H+ PI+LVG K+DL+ D + Sbjct: 73 DRLRPLSYPDTDVFLVCFSLENPNSLENCHSKWAEELKHYNPDTPIVLVGTKLDLKKDEE 132 Query: 132 TIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRASLMGKSKTN 191 +++L+++ PVT+++GQ + D+I A GY ECSAKT + E F A ++ K + Sbjct: 133 YVKKLKEKKISPVTTEQGQEMKDKIKACGYIECSAKTMENLTEAFNMAIDIAM--KQRLK 190 Query: 192 GKAKKNTTEKKKKKCVLL 209 +KKKC LL Sbjct: 191 DAPPTANARNQKKKCQLL 208 >4MIT-A nrPDB Length = 186 Score = 197 bits (500), Expect = 4e-51, Method: Compositional matrix adjust. Identities = 89/175 (50%), Positives = 123/175 (70%) Query: 12 KLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDTAGQEDY 71 KLV+VGDGA GKTCLLI +S +FPE Y+PTVF+NYV + R+++LALWDTAG E+Y Sbjct: 12 KLVVVGDGAVGKTCLLISYSIRKFPEDYIPTVFDNYVVSLTAGTRQIQLALWDTAGLEEY 71 Query: 72 DRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVPIILVGCKVDLRNDPQ 131 D+LRPLSY +++ LICFS+ S +NV KW EV+HF VPIILVG K+D RNDP Sbjct: 72 DQLRPLSYSSASIFLICFSVTSSVSYDNVITKWHPEVIHFAPKVPIILVGTKLDTRNDPA 131 Query: 132 TIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRASLMG 186 +++L ++G + + +G+ + ++I A Y ECSAKT ++ VF+ A + LM Sbjct: 132 IVKRLTEQGMTVINTAKGEELKNRIKAVKYIECSAKTSENLKTVFDEAVKTVLMN 186 >1M7B-A nrPDB Length = 184 Score = 196 bits (498), Expect = 6e-51, Method: Compositional matrix adjust. Identities = 92/176 (52%), Positives = 123/176 (69%), Gaps = 1/176 (0%) Query: 8 SIRRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDTAG 67 +++ K+V+VGD CGKT LL VF+K FPE YVPTVFENY A E+D +R+EL+LWDT+G Sbjct: 5 NVKCKIVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENYTASFEIDTQRIELSLWDTSG 64 Query: 68 QEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVPIILVGCKVDLR 127 YD +RPLSYPDS+ VLICF I P++L++V +KW E+ FC ++LVGCK DLR Sbjct: 65 SPYYDNVRPLSYPDSDAVLICFDISRPETLDSVLKKWKGEIQEFCPNTKMLLVGCKSDLR 124 Query: 128 NDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSA-KTGYGVREVFEAATRA 182 D T+ +L Q PV+ +G ++A QIGA Y ECSA ++ VR++F AT A Sbjct: 125 TDVSTLVELSNHRQTPVSYDQGANMAKQIGAATYIECSALQSENSVRDIFHVATLA 180 >1GWN-A nrPDB Length = 205 Score = 196 bits (497), Expect = 9e-51, Method: Compositional matrix adjust. Identities = 92/176 (52%), Positives = 123/176 (69%), Gaps = 1/176 (0%) Query: 8 SIRRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDTAG 67 +++ K+V+VGD CGKT LL VF+K FPE YVPTVFENY A E+D +R+EL+LWDT+G Sbjct: 26 NVKCKIVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENYTASFEIDTQRIELSLWDTSG 85 Query: 68 QEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVPIILVGCKVDLR 127 YD +RPLSYPDS+ VLICF I P++L++V +KW E+ FC ++LVGCK DLR Sbjct: 86 SPYYDNVRPLSYPDSDAVLICFDISRPETLDSVLKKWKGEIQEFCPNTKMLLVGCKSDLR 145 Query: 128 NDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSA-KTGYGVREVFEAATRA 182 D T+ +L Q PV+ +G ++A QIGA Y ECSA ++ VR++F AT A Sbjct: 146 TDVSTLVELSNHRQTPVSYDQGANMAKQIGAATYIECSALQSENSVRDIFHVATLA 201 >2ATX-A nrPDB Length = 194 Score = 191 bits (484), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 88/177 (49%), Positives = 126/177 (71%) Query: 8 SIRRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDTAG 67 ++ K V+VGDGA GKTCLL+ ++ FPE YVPTVF++Y V V G++ L L+DTAG Sbjct: 16 ALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAG 75 Query: 68 QEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVPIILVGCKVDLR 127 QEDYDRLRPLSYP ++V LICFS+ P S +NV+E+W+ E+ + VP +L+G ++DLR Sbjct: 76 QEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPFLLIGTQIDLR 135 Query: 128 NDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRASL 184 +DP+T+ +L ++P+ ++GQ +A +IGA Y ECSA T G++ VF+ A A L Sbjct: 136 DDPKTLARLNDMKEKPICVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIAIL 192 >2WBL-C nrPDB Length = 180 Score = 184 bits (467), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 87/173 (50%), Positives = 118/173 (68%), Gaps = 2/173 (1%) Query: 12 KLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDTAGQEDY 71 K V VGDGA GKTC+LI ++ FP YVPTVF+N+ A+V VDG V L LWDTAGQEDY Sbjct: 8 KCVTVGDGAVGKTCMLISYTGNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDY 67 Query: 72 DRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVPIILVGCKVDLRNDPQ 131 +RLRPLSY ++V L+ FS+ S EN+ +KW+ E+ H+ G+PI+LVG K+DLR+D Q Sbjct: 68 NRLRPLSYRGADVFLLAFSLISKASYENIHKKWLPELKHYAPGIPIVLVGTKLDLRDDKQ 127 Query: 132 TIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRASL 184 ++ G +T+ +G+ + IGA Y ECS+KT V+ VF+ A R +L Sbjct: 128 FLKD--HPGAASITTAQGEELRKMIGAVRYLECSSKTQQNVKAVFDTAIRVAL 178 >2NTY-C nrPDB Length = 180 Score = 184 bits (467), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 90/173 (52%), Positives = 118/173 (68%), Gaps = 2/173 (1%) Query: 12 KLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDTAGQEDY 71 K V VGDGA GKTC+LI ++ FP YVPTVF+N+ A+V VDG V L LWDTAGQEDY Sbjct: 8 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWDTAGQEDY 67 Query: 72 DRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVPIILVGCKVDLRNDPQ 131 +RLRPLSY ++V ++ FS+ S ENV +KWI E+ H+ GVPIILVG K+DLR+D Q Sbjct: 68 NRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKLDLRDDKQ 127 Query: 132 TIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRASL 184 + G P+T+ +G+ + IG+ Y ECS+KT V+ VF+AA + L Sbjct: 128 FF--IDHPGAVPITTNQGEELKKLIGSPIYIECSSKTQQNVKAVFDAAIKVVL 178 >3BWD-D nrPDB Length = 182 Score = 183 bits (464), Expect = 5e-47, Method: Compositional matrix adjust. Identities = 90/173 (52%), Positives = 118/173 (68%), Gaps = 2/173 (1%) Query: 12 KLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDTAGQEDY 71 K V VGDGA GKTCLLI ++ FP YVPTVF+N+ A+V V+G V L LWDTAGQEDY Sbjct: 10 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGATVNLGLWDTAGQEDY 69 Query: 72 DRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVPIILVGCKVDLRNDPQ 131 +RLRPLSY ++V ++ FS+ S ENV +KWI E+ H+ GVPI+LVG K+DLR+D Q Sbjct: 70 NRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKLDLRDDKQ 129 Query: 132 TIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRASL 184 + G P+T+ +G+ + IGA Y ECS+K+ V+ VF+AA R L Sbjct: 130 FF--IDHPGAVPITTVQGEELKKLIGAPAYIECSSKSQENVKGVFDAAIRVVL 180 >2J0V-A nrPDB Length = 212 Score = 173 bits (438), Expect = 5e-44, Method: Compositional matrix adjust. Identities = 84/173 (48%), Positives = 115/173 (66%), Gaps = 4/173 (2%) Query: 12 KLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDTAGQEDY 71 K V VGDGA GKTC+LI ++ +FP Y+PTVF+N+ A+V VDG+ V L LWDTAGQEDY Sbjct: 11 KCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVAVDGQIVNLGLWDTAGQEDY 70 Query: 72 DRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVPIILVGCKVDLRNDPQ 131 RLRPLSY +++ ++ FS+ S ENV +KW+ E+ F VPI+LVG K+DLR+D Sbjct: 71 SRLRPLSYRGADIFVLAFSLISKASYENVLKKWMPELRRFAPNVPIVLVGTKLDLRDDKG 130 Query: 132 TIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRASL 184 + + +TS +G+ + QIGA Y ECS+KT V+ VF+ A + L Sbjct: 131 YLA----DHTNVITSTQGEELRKQIGAAAYIECSSKTQQNVKAVFDTAIKVVL 179 >4U5X-A nrPDB Length = 178 Score = 172 bits (435), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 82/173 (47%), Positives = 113/173 (65%), Gaps = 2/173 (1%) Query: 12 KLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDTAGQEDY 71 K V VGDGA GKTC+LI ++ +FP Y+PTVF+N+ A+V VDG V L LWDTAG EDY Sbjct: 7 KCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVSVDGSVVNLGLWDTAGLEDY 66 Query: 72 DRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVPIILVGCKVDLRNDPQ 131 RLRPLSY ++V ++ FS+ S ENVQ+KW+ E+ F GVP++LVG K+DLR D Sbjct: 67 SRLRPLSYRGADVFILSFSLISRASYENVQKKWMPELRRFAPGVPVVLVGTKLDLREDRA 126 Query: 132 TIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRASL 184 + +T+++G+ + IGA Y ECS+KT ++ VF+ A + L Sbjct: 127 YLAD--HPASSIITTEQGEELRKLIGAVAYIECSSKTQRNIKAVFDTAIKVVL 177 >2REX-B nrPDB Length = 197 Score = 171 bits (433), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 82/186 (44%), Positives = 119/186 (63%), Gaps = 1/186 (0%) Query: 10 RRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDTAGQE 69 R KLV+VGD CGKT +L V +K +PE YVPTVFENY A +E + +RVEL+LWDT+G Sbjct: 10 RCKLVLVGDVQCGKTAMLQVLAKDCYPETYVPTVFENYTACLETEEQRVELSLWDTSGSP 69 Query: 70 DYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVPIILVGCKVDLRND 129 YD +RPL Y DS+ VL+CF I P+++++ +KW E+L +C ++L+GCK DLR D Sbjct: 70 YYDNVRPLCYSDSDAVLLCFDISRPETVDSALKKWRTEILDYCPSTRVLLIGCKTDLRTD 129 Query: 130 PQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTG-YGVREVFEAATRASLMGKS 188 T+ +L + Q P++ ++G ++A Q+GA Y E SA T + +F A+ L S Sbjct: 130 LSTLMELSHQKQAPISYEQGCAIAKQLGAEIYLEGSAFTSEKSIHSIFRTASMLCLNKPS 189 Query: 189 KTNGKA 194 K+ Sbjct: 190 PLPQKS 195 >3REG-A nrPDB Length = 194 Score = 166 bits (421), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 81/168 (48%), Positives = 105/168 (62%), Gaps = 10/168 (5%) Query: 12 KLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDTAGQEDY 71 K+V+VGDGA GKTCLL+ FSKG+ P YVPTVFEN+ ++ L LWDTAGQE+Y Sbjct: 25 KIVVVGDGAVGKTCLLLAFSKGEIPTAYVPTVFENFSHVMKYKNEEFILHLWDTAGQEEY 84 Query: 72 DRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVPIILVGCKVDLRNDPQ 131 DRLRPLSY DS+VVL+CF+++ S +N+ KW E+ H+ +LVG KVDLR D Sbjct: 85 DRLRPLSYADSDVVLLCFAVNNRTSFDNISTKWEPEIKHYIDTAKTVLVGLKVDLRKD-- 142 Query: 132 TIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAA 179 G VT QEG + ++G Y E S+ G+ EVFE + Sbjct: 143 --------GSDDVTKQEGDDLCQKLGCVAYIEASSVAKIGLNEVFEKS 182 >2Q3H-A nrPDB Length = 201 Score = 166 bits (419), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 78/173 (45%), Positives = 116/173 (67%) Query: 12 KLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDTAGQEDY 71 K V+VGDGA GKT L++ ++ +P Y+PT F+N+ A V VDGR V L L DTAGQ+++ Sbjct: 22 KCVLVGDGAVGKTSLVVSYTTNGYPTEYIPTAFDNFSAVVSVDGRPVRLQLCDTAGQDEF 81 Query: 72 DRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVPIILVGCKVDLRNDPQ 131 D+LRPL Y ++++ L+CFS+ P S +NV EKW+ E+ C PIILVG + DLR D + Sbjct: 82 DKLRPLCYTNTDIFLLCFSVVSPSSFQNVSEKWVPEIRCHCPKAPIILVGTQSDLREDVK 141 Query: 132 TIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRASL 184 + +L + ++PV + + +A++I A Y ECSA T ++EVF+AA A + Sbjct: 142 VLIELDKCKEKPVPEEAAKLLAEEIKAASYIECSALTQKNLKEVFDAAIVAGI 194 >5HZH-A nrPDB Length = 332 Score = 154 bits (390), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 73/130 (56%), Positives = 92/130 (70%) Query: 55 GRRVELALWDTAGQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQG 114 G+ V L LWDTAG EDYDRLRPLSYP ++V LICFS+ P S ENV+ KW EV H C Sbjct: 200 GKPVNLGLWDTAGLEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCPN 259 Query: 115 VPIILVGCKVDLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVRE 174 PIILVG K+DLR+D TIE+L+++ P+T +G ++A +IGA Y ECSA T G++ Sbjct: 260 TPIILVGTKLDLRDDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQRGLKT 319 Query: 175 VFEAATRASL 184 VF+ A RA L Sbjct: 320 VFDEAIRAVL 329 Score = 63.5 bits (153), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 28/44 (63%), Positives = 34/44 (77%) Query: 12 KLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDG 55 K V+VGDGA GKTCLLI ++ FP Y+PTVF+NY A+V VDG Sbjct: 8 KCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDG 51 >1YZU-A nrPDB Length = 170 Score = 95.9 bits (237), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 54/167 (32%), Positives = 96/167 (57%), Gaps = 16/167 (9%) Query: 12 KLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVAD-VEVDGRRVELALWDTAGQED 70 K+V++G+G GKT L++ + + +F + ++ T+ +++ + + G+RV LA+WDTAGQE Sbjct: 8 KVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQER 67 Query: 71 YDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQG-VPIILVGCKVDLRND 129 + L P+ Y DSN ++ + I DS + V+ W+ E+ + + +VG K+DL Sbjct: 68 FHALGPIYYRDSNGAILVYDITDEDSFQKVKN-WVKELRKMLGNEICLCIVGNKIDL--- 123 Query: 130 PQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVF 176 E ++ V+ QE +S A+ +GA +Y SAK G+ E+F Sbjct: 124 ---------EKERHVSIQEAESYAESVGAK-HYHTSAKQNKGIEELF 160 >2G6B-A nrPDB Length = 180 Score = 92.8 bits (229), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 59/175 (33%), Positives = 93/175 (53%), Gaps = 21/175 (12%) Query: 12 KLVIVGDGACGKTCLLIVFSKGQF-PEVYVPTV---FENYVADVEVDGRRVELALWDTAG 67 K+++VGD GKTCLL+ F G F ++ TV F N V DV DG +V+L +WDTAG Sbjct: 12 KVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVLDV--DGVKVKLQMWDTAG 69 Query: 68 QEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQG-VPIILVGCKVDL 126 QE + + Y D++ +L+ + + S +N+Q W+ E+ + Q V ++L+G KVD Sbjct: 70 QERFRSVTHAYYRDAHALLLLYDVTNKASFDNIQA-WLTEIHEYAQHDVALMLLGNKVD- 127 Query: 127 RNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATR 181 ++ V ++G+ +A + G + E SAKTG V F A + Sbjct: 128 -----------SAHERVVKREDGEKLAKEYGLP-FMETSAKTGLNVDLAFTAIAK 170 >1EK0-A nrPDB Length = 170 Score = 90.5 bits (223), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 53/168 (31%), Positives = 92/168 (54%), Gaps = 15/168 (8%) Query: 12 KLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVAD-VEVDGRRVELALWDTAGQED 70 KLV++G+ A GK+ +++ F F E PT+ ++ V ++ V+ +WDTAGQE Sbjct: 5 KLVLLGEAAVGKSSIVLRFVSNDFAENKEPTIGAAFLTQRVTINEHTVKFEIWDTAGQER 64 Query: 71 YDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLH--FCQGVPIILVGCKVDLRN 128 + L P+ Y ++ L+ + + P S + W+ E LH + + I LVG K+D+ Sbjct: 65 FASLAPMYYRNAQAALVVYDVTKPQSFIKARH-WVKE-LHEQASKDIIIALVGNKIDM-- 120 Query: 129 DPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVF 176 L++ G++ V +EG+ +A++ G ++E SAKTG V +VF Sbjct: 121 -------LQEGGERKVAREEGEKLAEEKGLL-FFETSAKTGENVNDVF 160 >2RHD-A nrPDB Length = 175 Score = 90.1 bits (222), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 52/169 (30%), Positives = 93/169 (55%), Gaps = 16/169 (9%) Query: 12 KLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENY-VADVEVDGRRVELALWDTAGQED 70 KL+++GD GK+CLL+ F+ + + Y+ T+ ++ + + ++ + V+L +WDTAGQE Sbjct: 11 KLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTISLENKTVKLQIWDTAGQER 70 Query: 71 YDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFC-QGVPIILVGCKVDLRND 129 + + Y ++ ++I + + DS +NV++ WI E+ + + V +LVG K DL + Sbjct: 71 FRTITSSYYRGAHGIIIVYDVTDRDSFDNVKQ-WIQEIDRYAMENVNKLLVGNKCDLVS- 128 Query: 130 PQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEA 178 ++ VTS EG+ +AD G + E SAK Y V + F Sbjct: 129 -----------KRVVTSDEGRELADSHGIK-FIETSAKNAYNVEQAFHT 165 >2OCB-A nrPDB Length = 180 Score = 89.0 bits (219), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 61/185 (32%), Positives = 93/185 (50%), Gaps = 20/185 (10%) Query: 6 GNSIRRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVA-DVEVDGRRVELALWD 64 G S+ K++++GDG GK+ L+ + +F T+ ++ D+EVDGR V L +WD Sbjct: 3 GKSLLLKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFVTLQIWD 62 Query: 65 TAGQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFC-----QGVPIIL 119 TAGQE + LR Y ++ L+ FS+D S EN+ W E +++ + P ++ Sbjct: 63 TAGQERFKSLRTPFYRGADCCLLTFSVDDRQSFENLG-NWQKEFIYYADVKDPEHFPFVV 121 Query: 120 VGCKVDLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAA 179 +G KVD + D Q VT++E Q+ + G Y E SAK V FE A Sbjct: 122 LGNKVD-KEDRQ------------VTTEEAQTWCMENGDYPYLETSAKDDTNVTVAFEEA 168 Query: 180 TRASL 184 R L Sbjct: 169 VRQVL 173 >4QXA-A nrPDB Length = 208 Score = 88.6 bits (218), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 56/206 (27%), Positives = 98/206 (47%), Gaps = 20/206 (9%) Query: 5 VGNSIRRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYV-ADVEVDGRRVELALW 63 G S K++++GDG GK+ L+ + +F T+ ++ D+EVDG V + +W Sbjct: 3 AGKSSLFKIILLGDGGVGKSSLMNRYVTNKFDSQLFHTIGVEFLNKDLEVDGHFVTMQIW 62 Query: 64 DTAGQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFC-----QGVPII 118 DTAG E + LR Y S+ L+ FS+D S +N+ W E +++ + P + Sbjct: 63 DTAGLERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLS-NWKKEFIYYADVKEPESFPFV 121 Query: 119 LVGCKVDLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEA 178 ++G K D++ ++ V+++E Q+ G Y+E SAK V FE Sbjct: 122 ILGNKTDIK-------------ERQVSTEEAQAWCKDNGDYPYFETSAKDSTNVAAAFEE 168 Query: 179 ATRASLMGKSKTNGKAKKNTTEKKKK 204 A R L + ++ + +T +K Sbjct: 169 AVRRILATEDRSEHLIQTDTVNLHRK 194 >1WMS-A nrPDB Length = 177 Score = 88.6 bits (218), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 55/186 (29%), Positives = 91/186 (48%), Gaps = 20/186 (10%) Query: 5 VGNSIRRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYV-ADVEVDGRRVELALW 63 G S K++++GDG GK+ L+ + +F T+ ++ D+EVDG V + +W Sbjct: 2 AGKSSLFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIW 61 Query: 64 DTAGQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFC-----QGVPII 118 DTAGQE + LR Y S+ L+ FS+D S +N+ W E +++ + P + Sbjct: 62 DTAGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLS-NWKKEFIYYADVKEPESFPFV 120 Query: 119 LVGCKVDLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEA 178 ++G K+D+ ++ V+++E Q+ G Y+E SAK V FE Sbjct: 121 ILGNKIDI-------------SERQVSTEEAQAWCRDNGDYPYFETSAKDATNVAAAFEE 167 Query: 179 ATRASL 184 A R L Sbjct: 168 AVRRVL 173 >6IF2-B nrPDB Length = 186 Score = 86.7 bits (213), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 55/177 (31%), Positives = 92/177 (51%), Gaps = 15/177 (8%) Query: 12 KLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENY-VADVEVDGRRVELALWDTAGQED 70 KL+I+GD GK+ LL+ F+ F Y+ T+ ++ + VE++G +V+L +WDTAG E Sbjct: 16 KLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAGLER 75 Query: 71 YDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVPIILVGCKVDLRNDP 130 + + Y ++ V++ + + +S NV+ +W+ E+ C V ILVG K D DP Sbjct: 76 FRTITSTYYRGTHGVIVVYDVTSAESFVNVK-RWLHEINQNCDDVCRILVGNKND---DP 131 Query: 131 QTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRASLMGK 187 + ++ V +++ A Q+G +E SAK V E+F T L K Sbjct: 132 E---------RKVVETEDAYKFAGQMGIQ-LFETSAKENVNVEEMFNCITELVLRAK 178 >1TU4-A nrPDB Length = 171 Score = 85.9 bits (211), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 61/182 (33%), Positives = 90/182 (49%), Gaps = 21/182 (11%) Query: 5 VGNSI-RRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVAD-VEVDGRRVELAL 62 +GN I + KLV++G+ A GK+ L++ F KGQF E T+ ++ V +D V+ + Sbjct: 1 MGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEI 60 Query: 63 WDTAGQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVP---IIL 119 WDTAGQE Y L P+ Y + ++ + I +S + W+ E+ Q P I L Sbjct: 61 WDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAK-NWVKELQR--QASPNIVIAL 117 Query: 120 VGCKVDLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAA 179 G K DL N ++ V QE QS AD + + E SAKT V E+F A Sbjct: 118 SGNKADLAN------------KRAVDFQEAQSYADD-NSLLFMETSAKTSMNVNEIFMAI 164 Query: 180 TR 181 + Sbjct: 165 AK 166 >5LEF-A nrPDB Length = 191 Score = 84.7 bits (208), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 63/204 (30%), Positives = 104/204 (50%), Gaps = 18/204 (8%) Query: 5 VGNSIRR-KLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVAD-VEVDGRRVELAL 62 +GN +R+ KLV +G+ + GKT L+ F F Y T+ ++++ + ++ R V L L Sbjct: 3 MGNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQL 62 Query: 63 WDTAGQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEV-LHFCQGVPIILVG 121 WDTAG E + L P DS V ++ + I +S + KWI +V V I+LVG Sbjct: 63 WDTAGLERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTT-KWIDDVRTERGSDVIIMLVG 121 Query: 122 CKVDLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATR 181 K DL + Q V+ +EG+ A ++ + E SAK GY V+++F Sbjct: 122 NKTDLADKRQ------------VSIEEGERKAKELNVM-FIETSAKAGYNVKQLFRRVA- 167 Query: 182 ASLMGKSKTNGKAKKNTTEKKKKK 205 A+L G T +++++ + K +K Sbjct: 168 AALPGMESTQDRSREDMIDIKLEK 191 >2FFQ-A nrPDB Length = 171 Score = 84.3 bits (207), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 58/175 (33%), Positives = 88/175 (50%), Gaps = 16/175 (9%) Query: 12 KLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVAD-VEVDGRRVELALWDTAGQED 70 KLV +G+ + GKT L+ F F Y T+ ++++ + ++ R V L LWDTAGQE Sbjct: 4 KLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 63 Query: 71 YDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEV-LHFCQGVPIILVGCKVDLRND 129 + L P DS V ++ + I +S + KWI +V V I+LVG K DL + Sbjct: 64 FRSLIPSYIRDSTVAVVVYDITNLNSFQQT-SKWIDDVRTERGSDVIIMLVGNKTDLADK 122 Query: 130 PQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRASL 184 Q +T +EG+ A ++ + E SAKTGY V+++F A L Sbjct: 123 RQ------------ITIEEGEQRAKELSVM-FIETSAKTGYNVKQLFRRVASALL 164 >4G01-B nrPDB Length = 181 Score = 84.0 bits (206), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 58/180 (32%), Positives = 89/180 (49%), Gaps = 20/180 (11%) Query: 1 MSQQVGNSIRRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVAD-VEVDGRRVE 59 M+ SI KLV++GD GK+ L++ F K QF E T+ + + + V+ V+ Sbjct: 3 MAAAGNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVK 62 Query: 60 LALWDTAGQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVP--- 116 +WDTAGQE Y L P+ Y + +I F + S E + KW+ E+ QG P Sbjct: 63 FEIWDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAK-KWVQELQ--AQGNPNMV 119 Query: 117 IILVGCKVDLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVF 176 + L G K DL + + VT+++ Q+ A + G + E SAKT V+E+F Sbjct: 120 MALAGNKSDLLD------------ARKVTAEDAQTYAQENG-LFFMETSAKTATNVKEIF 166 >5CM8-B nrPDB Length = 203 Score = 83.6 bits (205), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 71/205 (34%), Positives = 107/205 (52%), Gaps = 23/205 (11%) Query: 12 KLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDTAGQEDY 71 K+++VG G GK+ L + F +F E Y PT ++Y V +DG V++ + DTAGQEDY Sbjct: 15 KVIMVGSGGVGKSALTLQFMYDEFVEDYEPTKADSYRKKVVLDGEEVQIDILDTAGQEDY 74 Query: 72 DRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFC--QGVPIILVGCKVDLRND 129 +R + L FSI +S + QE + ++L + +P +LVG K DL ND Sbjct: 75 AAIRDNYFRSGEGFLCVFSITDDESFQATQE-FREQILRVKNDESIPFLLVGNKCDL-ND 132 Query: 130 PQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVF-----EAATRASL 184 + + P++ E Q A Q A Y E SAKT V +VF E +R + Sbjct: 133 KRKV---------PLS--ECQLRAQQ-WAVPYVETSAKTRENVDKVFFDLMREIRSRKTE 180 Query: 185 MGKSKTNGKAKKNTTEKKKKKCVLL 209 K+ T+G+A K+ +K++ KC LL Sbjct: 181 DSKA-TSGRA-KDRCKKRRLKCTLL 203 >4M8N-E nrPDB Length = 199 Score = 83.6 bits (205), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 55/172 (31%), Positives = 87/172 (50%), Gaps = 15/172 (8%) Query: 12 KLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDTAGQEDY 71 KLV++G G GK+ L + F +G F E Y PT+ ++Y VEVD ++ L + DTAG E + Sbjct: 8 KLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDAQQCMLEILDTAGTEQF 67 Query: 72 DRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHF--CQGVPIILVGCKVDLRND 129 +R L + + +SI + ++Q+ ++L VP+ILVG K DL Sbjct: 68 TAMRDLYMKNGQGFALVYSITAQSTFNDLQD-LREQILRVKDTDDVPMILVGNKCDL--- 123 Query: 130 PQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATR 181 E ++ V ++GQ++A Q + E SAK+ V E+F R Sbjct: 124 ---------EDERVVGKEQGQNLARQWNNCAFLESSAKSKINVNEIFYDLVR 166 >5SZH-B nrPDB Length = 203 Score = 82.4 bits (202), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 53/190 (27%), Positives = 97/190 (51%), Gaps = 18/190 (9%) Query: 12 KLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENY-VADVEVDGRRVELALWDTAGQED 70 KL+++GD GK+CLL+ F+ + E Y+ T+ ++ + +E+DG+ ++L +WDTAGQE Sbjct: 12 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQER 71 Query: 71 YDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFC-QGVPIILVGCKVDLRND 129 + + Y ++ +++ + + +S NV++ W+ E+ + + V +LVG K DL Sbjct: 72 FRTITSSYYRGAHGIIVVYDVTDQESYANVKQ-WLQEIDRYASENVNKLLVGNKSDLTT- 129 Query: 130 PQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVF--EAATRASLMGK 187 ++ V + + AD +G + E SAK V + F AA MG Sbjct: 130 -----------KKVVDNTTAKEFADSLGIP-FLETSAKNATNVEQAFMTMAAEIKKRMGP 177 Query: 188 SKTNGKAKKN 197 +G + N Sbjct: 178 GAASGGERPN 187 >4KLZ-A nrPDB Length = 173 Score = 82.4 bits (202), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 56/177 (31%), Positives = 88/177 (49%), Gaps = 14/177 (7%) Query: 6 GNSIRRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDT 65 G+S KLV++G G GK+ + + F +FPE + PT+ + Y + +D L + DT Sbjct: 1 GSSREYKLVMLGAGGVGKSAMTMQFISHRFPEDHDPTIEDAYKIRIRIDDEPANLDILDT 60 Query: 66 AGQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQE-KWIAEVLHFCQGVPIILVGCKV 124 AGQ ++ +R +IC+SI S V+E K + + P++LVG K Sbjct: 61 AGQAEFTAMRDQYMRAGEGFIICYSITDRRSFHEVREFKQLIYRVRRTDDTPVVLVGNKS 120 Query: 125 DLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATR 181 DL+ QLRQ VT +EG ++A + ++E SA Y + +VF A R Sbjct: 121 DLK-------QLRQ-----VTKEEGLALAREFSCP-FFETSAAYRYYIDDVFHALVR 164 >5SZI-A nrPDB Length = 209 Score = 81.6 bits (200), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 48/172 (27%), Positives = 86/172 (50%), Gaps = 16/172 (9%) Query: 12 KLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENY-VADVEVDGRRVELALWDTAGQED 70 KL+++GD GKTC+L FS+ F ++ T+ ++ + +E+DG+R++L +WDTAGQE Sbjct: 12 KLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQER 71 Query: 71 YDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEV-LHFCQGVPIILVGCKVDLRND 129 + + Y + +++ + I S +N++ WI + H V +++G K D+ + Sbjct: 72 FRTITTAYYRGAMGIMLVYDITNEKSFDNIRN-WIRNIEEHASADVEKMILGNKCDVNDK 130 Query: 130 PQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATR 181 Q V+ + G+ +A G + E SAK V F R Sbjct: 131 RQ------------VSKERGEKLALDYGIK-FMETSAKANINVENAFFTLAR 169 >4LHX-A nrPDB Length = 186 Score = 81.6 bits (200), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 48/172 (27%), Positives = 86/172 (50%), Gaps = 16/172 (9%) Query: 12 KLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENY-VADVEVDGRRVELALWDTAGQED 70 KL+++GD GKTC+L FS+ F ++ T+ ++ + +E+DG+R++L +WDTAGQE Sbjct: 12 KLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQER 71 Query: 71 YDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEV-LHFCQGVPIILVGCKVDLRND 129 + + Y + +++ + I S +N++ WI + H V +++G K D+ + Sbjct: 72 FRTITTAYYRGAMGIMLVYDITNEKSFDNIRN-WIRNIEEHASADVEKMILGNKCDVNDK 130 Query: 130 PQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATR 181 Q V+ + G+ +A G + E SAK V F R Sbjct: 131 RQ------------VSKERGEKLALDYGIK-FMETSAKANINVENAFFTLAR 169 >4RKF-A nrPDB Length = 190 Score = 81.3 bits (199), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 51/168 (30%), Positives = 87/168 (51%), Gaps = 16/168 (9%) Query: 12 KLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENY-VADVEVDGRRVELALWDTAGQED 70 KL+I+G+ + GKT L ++ F +V TV ++ V V +RV+L +WDTAG E Sbjct: 25 KLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRVKLQIWDTAGLER 84 Query: 71 YDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFC-QGVPIILVGCKVDLRND 129 Y + Y + ++ + + DS +VQ+ W+ ++ + +ILVG K D+ Sbjct: 85 YRTITTAYYRGAMGFILMYDVTNEDSFNSVQD-WVTQIKTYSWDNAQVILVGNKCDM--- 140 Query: 130 PQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFE 177 E Q+ ++ + G+ +ADQ+G ++E SAK V+ VFE Sbjct: 141 ---------EDQRVISFERGRQLADQLGVE-FFETSAKENVNVKAVFE 178 >2P5S-A nrPDB Length = 199 Score = 81.3 bits (199), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 57/167 (34%), Positives = 87/167 (52%), Gaps = 14/167 (8%) Query: 12 KLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENY-VADVEVDGRRVELALWDTAGQED 70 K+V+ GD A GK+ L+ K +F E T+ ++ + + VDG R L LWDTAGQE Sbjct: 30 KIVLAGDAAVGKSSFLMRLCKNEFRENISATLGVDFQMKTLIVDGERTVLQLWDTAGQER 89 Query: 71 YDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKW---IAEVLHFCQGVPIILVGCKVDLR 127 + + + ++ VL+ + + S N++E W I + H + VPI+LVG K D+R Sbjct: 90 FRSIAKSYFRKADGVLLLYDVTCEKSFLNIRE-WVDMIEDAAH--ETVPIMLVGNKADIR 146 Query: 128 NDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVRE 174 + T EGQ+ V G+ +A GA + E SAK G + E Sbjct: 147 DTAAT------EGQKCVPGHFGEKLAMTYGAL-FCETSAKDGSNIVE 186 >2WWX-A nrPDB Length = 175 Score = 81.3 bits (199), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 47/167 (28%), Positives = 88/167 (52%), Gaps = 16/167 (9%) Query: 12 KLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENY-VADVEVDGRRVELALWDTAGQED 70 KL+++GD GK+CLL+ F+ + E Y+ T+ ++ + +E+DG+ ++L +WDTAGQE Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQER 69 Query: 71 YDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFC-QGVPIILVGCKVDLRND 129 + + Y ++ +++ + + +S NV++ W+ E+ + + V +LVG K DL Sbjct: 70 FRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYASENVNKLLVGIKCDLTT- 127 Query: 130 PQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVF 176 ++ V + AD +G + E SAK V + F Sbjct: 128 -----------KKVVDYTTAKEFADSLGIP-FLETSAKNATNVEQSF 162 >3L0I-B nrPDB Length = 199 Score = 80.9 bits (198), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 47/167 (28%), Positives = 88/167 (52%), Gaps = 16/167 (9%) Query: 12 KLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENY-VADVEVDGRRVELALWDTAGQED 70 KL+++GD GK+CLL+ F+ + E Y+ T+ ++ + +E+DG+ ++L +WDTAGQE Sbjct: 35 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQER 94 Query: 71 YDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFC-QGVPIILVGCKVDLRND 129 + + Y ++ +++ + + +S NV++ W+ E+ + + V +LVG K DL Sbjct: 95 FRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYASENVNKLLVGNKCDLTT- 152 Query: 130 PQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVF 176 ++ V + AD +G + E SAK V + F Sbjct: 153 -----------KKVVDYTTAKEFADSLGIP-FLETSAKNATNVEQSF 187 >4DXA-A nrPDB Length = 169 Score = 80.5 bits (197), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 54/172 (31%), Positives = 86/172 (50%), Gaps = 15/172 (8%) Query: 12 KLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDTAGQEDY 71 KLV++G GK+ L + F +G F E Y PT+ ++Y VEVD ++ L + DTAG E + Sbjct: 7 KLVVLGSVGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDAQQCMLEILDTAGTEQF 66 Query: 72 DRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHF--CQGVPIILVGCKVDLRND 129 +R L + + +SI + ++Q+ ++L VP+ILVG K DL Sbjct: 67 TAMRDLYMKNGQGFALVYSITAQSTFNDLQD-LREQILRVKDTDDVPMILVGNKCDL--- 122 Query: 130 PQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATR 181 E ++ V ++GQ++A Q + E SAK+ V E+F R Sbjct: 123 ---------EDERVVGKEQGQNLARQWNNCAFLESSAKSKINVNEIFYDLVR 165 >5LDD-C nrPDB Length = 207 Score = 80.5 bits (197), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 49/180 (27%), Positives = 89/180 (49%), Gaps = 18/180 (10%) Query: 12 KLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVA-DVEVDGRRVELALWDTAGQED 70 K++I+GD GKT L+ + +F Y T+ +++ +V VD R+V + LWDTAGQE Sbjct: 12 KVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTREVMVDDRQVTMQLWDTAGQER 71 Query: 71 YDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVL-----HFCQGVPIILVGCKVD 125 + L Y ++ ++ F ++ S + + + W E L + P +++G K+D Sbjct: 72 FQSLGVAFYRGADCCVLVFDVNNAKSFDAL-DSWRDEFLIQASPRDPENFPFVVLGIKID 130 Query: 126 LRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRASLM 185 + +E ++ ++++ Q+ G Y+E SAK V E F+ R +LM Sbjct: 131 V-----------EESKRVISTKRAQTFCQSKGGIPYFETSAKEAINVEEAFQVIARNALM 179 >6O62-A nrPDB Length = 184 Score = 80.1 bits (196), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 50/167 (29%), Positives = 86/167 (51%), Gaps = 16/167 (9%) Query: 12 KLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENY-VADVEVDGRRVELALWDTAGQED 70 KL++VGD GK+CLL+ F + +F ++ T+ ++ + +E G+R++L +WDTAGQE Sbjct: 16 KLLLVGDSGVGKSCLLLRFVEDKFNPSFITTIGIDFKIRTIESKGKRIKLQVWDTAGQER 75 Query: 71 YDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVL-HFCQGVPIILVGCKVDLRND 129 + + Y + +++ + + S ENV E W V H + I LVG K D Sbjct: 76 FRTITTAYYRGAMGIVLIYDVTDSRSFENV-ENWFQTVTQHANEDAQIFLVGNKCD---- 130 Query: 130 PQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVF 176 E + V+ ++GQ +A ++ + E SAK+ V +F Sbjct: 131 --------DEVNRQVSKEQGQELAAKLNVP-FLEASAKSNENVDSIF 168 >2GIL-A nrPDB Length = 162 Score = 80.1 bits (196), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 56/173 (32%), Positives = 86/173 (49%), Gaps = 16/173 (9%) Query: 12 KLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVAD-VEVDGRRVELALWDTAGQED 70 KLV +G+ + GKT L+ F F Y T+ ++++ + ++ R V L LWDTAGQE Sbjct: 3 KLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 62 Query: 71 YDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEV-LHFCQGVPIILVGCKVDLRND 129 + L P DS V ++ + I +S + KWI +V V I+LVG K DL + Sbjct: 63 FRSLIPSYIRDSTVAVVVYDITNVNSFQQTT-KWIDDVRTERGSDVIIMLVGNKTDLADK 121 Query: 130 PQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRA 182 Q V+ +EG+ A ++ + E SAK GY V+++F A Sbjct: 122 RQ------------VSIEEGERKAKELNVM-FIETSAKAGYNVKQLFRRVAAA 161 >1Z0A-A nrPDB Length = 174 Score = 79.7 bits (195), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 50/167 (29%), Positives = 86/167 (51%), Gaps = 16/167 (9%) Query: 12 KLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVAD-VEVDGRRVELALWDTAGQED 70 K +I+GD GK+CLL+ F+ +F V+ T+ + A + +DG++++L +WDTAGQE Sbjct: 12 KYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQES 71 Query: 71 YDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVL-HFCQGVPIILVGCKVDLRND 129 + + Y + L+ + I D+ ++ W+ + H + I+L+G K DL Sbjct: 72 FRSITRSYYRGAAGALLVYDITRRDTFNHLT-TWLEDARQHSNSNMVIMLIGNKSDL--- 127 Query: 130 PQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVF 176 E ++ V +EG++ A + G + E SAKT V E F Sbjct: 128 ---------ESRREVKKEEGEAFAREHGLI-FMETSAKTASNVEEAF 164 >4KYI-B nrPDB Length = 170 Score = 79.3 bits (194), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 55/174 (31%), Positives = 84/174 (48%), Gaps = 20/174 (11%) Query: 12 KLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVAD-VEVDGRRVELALWDTAGQED 70 KLV++G+ A GK+ L++ F KGQF E T+ ++ V +D V+ +WDTAG E Sbjct: 11 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGLER 70 Query: 71 YDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVP---IILVGCKVDLR 127 Y L P+ Y + ++ + I D+ + W+ E+ Q P I L G K DL Sbjct: 71 YHSLAPMYYRGAQAAIVVYDITNTDTFARAK-NWVKELQR--QASPNIVIALAGNKADLA 127 Query: 128 NDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATR 181 + ++ V QE Q+ AD + + E SAKT V E+F A + Sbjct: 128 S------------KRAVEFQEAQAYADD-NSLLFMETSAKTAMNVNEIFMAIAK 168 >5LPN-A nrPDB Length = 177 Score = 79.0 bits (193), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 46/167 (27%), Positives = 87/167 (52%), Gaps = 16/167 (9%) Query: 12 KLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENY-VADVEVDGRRVELALWDTAGQED 70 KL+++GD GKTC+L FS F ++ T+ ++ + VE+ G++++L +WDTAGQE Sbjct: 13 KLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQER 72 Query: 71 YDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEV-LHFCQGVPIILVGCKVDLRND 129 + + Y + +++ + I S EN+ KW+ + H + V +L+G K D+ Sbjct: 73 FHTITTSYYRGAMGIMLVYDITNGKSFENIS-KWLRNIDEHANEDVERMLLGNKCDM--- 128 Query: 130 PQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVF 176 + ++ V +G+ +A + G ++E SAK + + F Sbjct: 129 ---------DDKRVVPKGKGEQIAREHGIR-FFETSAKANINIEKAF 165 >3CPH-A nrPDB Length = 213 Score = 78.6 bits (192), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 45/167 (26%), Positives = 90/167 (53%), Gaps = 17/167 (10%) Query: 12 KLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENY-VADVEVDGRRVELALWDTAGQED 70 K++++GD GK+CLL+ F + +F ++ T+ ++ + V+++G++V+L LWDTAGQE Sbjct: 22 KILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQER 81 Query: 71 YDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVL-HFCQGVPIILVGCKVDLRND 129 + + Y + +++ + + + N+++ W V H ++LVG K D+ Sbjct: 82 FRTITTAYYRGAMGIILVYDVTDERTFTNIKQ-WFKTVNEHANDEAQLLLVGNKSDMET- 139 Query: 130 PQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVF 176 + VT+ +G+++A ++G + E SAK V E+F Sbjct: 140 ------------RVVTADQGEALAKELGIP-FIESSAKNDDNVNEIF 173 >5SZJ-A nrPDB Length = 202 Score = 78.6 bits (192), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 46/167 (27%), Positives = 87/167 (52%), Gaps = 16/167 (9%) Query: 12 KLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENY-VADVEVDGRRVELALWDTAGQED 70 KL+++GD GKTC+L FS F ++ T+ ++ + VE+ G++++L +WDTAGQE Sbjct: 13 KLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQER 72 Query: 71 YDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEV-LHFCQGVPIILVGCKVDLRND 129 + + Y + +++ + I S EN+ KW+ + H + V +L+G K D+ Sbjct: 73 FHTITTSYYRGAMGIMLVYDITNGKSFENIS-KWLRNIDEHANEDVERMLLGNKCDM--- 128 Query: 130 PQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVF 176 + ++ V +G+ +A + G ++E SAK + + F Sbjct: 129 ---------DDKRVVPKGKGEQIAREHGIR-FFETSAKANINIEKAF 165 >2GF0-A nrPDB Length = 199 Score = 78.2 bits (191), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 58/195 (29%), Positives = 93/195 (47%), Gaps = 24/195 (12%) Query: 23 KTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDTAGQEDYDRLRPLSYPDS 82 K+ L++ F KG F + Y+PT+ + Y + D L + DT G + ++ LS Sbjct: 21 KSSLVLRFVKGTFRDTYIPTIEDTYRQVISCDKSVCTLQITDTTGSHQFPAMQRLSISKG 80 Query: 83 NVVLICFSIDLPDSLENVQE--KWIAEVLHFCQGVPIILVGCKVDLRNDPQTIEQLRQEG 140 + ++ FS+ SLE + K I ++ + +P++LVG K D E Sbjct: 81 HAFILVFSVTSKQSLEELGPIYKLIVQIKGSVEDIPVMLVGNKCD-------------ET 127 Query: 141 QQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVF------EAATRASLMGKSKTNGKA 194 Q+ V ++E Q+VA Q + E SAK Y V+E+F E SL K +GK Sbjct: 128 QREVDTREAQAVA-QEWKCAFMETSAKMNYNVKELFQELLTLETRRNMSLNIDGKRSGKQ 186 Query: 195 KKNTTEKKKKKCVLL 209 K+ T++ K KC L+ Sbjct: 187 KR--TDRVKGKCTLM 199 >2A5J-A nrPDB Length = 191 Score = 78.2 bits (191), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 50/167 (29%), Positives = 86/167 (51%), Gaps = 16/167 (9%) Query: 12 KLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVAD-VEVDGRRVELALWDTAGQED 70 K +I+GD GK+CLL+ F+ +F V+ T+ + A V +DG++++L +WDTAGQE Sbjct: 23 KYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWDTAGQES 82 Query: 71 YDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVL-HFCQGVPIILVGCKVDLRND 129 + + Y + L+ + I ++ ++ W+ + H + I+L+G K DL Sbjct: 83 FRSITRSYYRGAAGALLVYDITRRETFNHLT-SWLEDARQHSSSNMVIMLIGNKSDL--- 138 Query: 130 PQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVF 176 E ++ V +EG++ A + G + E SAKT V E F Sbjct: 139 ---------ESRRDVKREEGEAFAREHGLI-FMETSAKTACNVEEAF 175 >3DZ8-A nrPDB Length = 191 Score = 78.2 bits (191), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 52/168 (30%), Positives = 87/168 (51%), Gaps = 16/168 (9%) Query: 12 KLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENY-VADVEVDGRRVELALWDTAGQED 70 KL+I+G+ + GKT L ++ F +V TV ++ V V +RV+L +WDTAGQE Sbjct: 25 KLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTVYRHEKRVKLQIWDTAGQER 84 Query: 71 YDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFC-QGVPIILVGCKVDLRND 129 Y + Y + ++ + I +S VQ+ W ++ + +ILVG K D+ Sbjct: 85 YRTITTAYYRGAMGFILMYDITNEESFNAVQD-WATQIKTYSWDNAQVILVGNKCDM--- 140 Query: 130 PQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFE 177 E ++ V +++GQ +A+Q+G ++E SAK VR+ FE Sbjct: 141 ---------EEERVVPTEKGQLLAEQLGF-DFFEASAKENISVRQAFE 178 >2OCY-C nrPDB Length = 170 Score = 77.8 bits (190), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 45/167 (26%), Positives = 90/167 (53%), Gaps = 17/167 (10%) Query: 12 KLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENY-VADVEVDGRRVELALWDTAGQED 70 K++++GD GK+CLL+ F + +F ++ T+ ++ + V+++G++V+L LWDTAGQE Sbjct: 5 KILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQER 64 Query: 71 YDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEV-LHFCQGVPIILVGCKVDLRND 129 + + Y + +++ + + + N+++ W V H ++LVG K D+ Sbjct: 65 FRTITTAYYRGAMGIILVYDVTDERTFTNIKQ-WFKTVNEHANDEAQLLLVGNKSDMET- 122 Query: 130 PQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVF 176 + VT+ +G+++A ++G + E SAK V E+F Sbjct: 123 ------------RVVTADQGEALAKELGIP-FIESSAKNDDNVNEIF 156 >2GF9-A nrPDB Length = 189 Score = 77.8 bits (190), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 52/174 (29%), Positives = 89/174 (51%), Gaps = 16/174 (9%) Query: 6 GNSIRRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENY-VADVEVDGRRVELALWD 64 G+ KL+++G+ + GKT L ++ F +V TV ++ V V +R++L +WD Sbjct: 18 GSDYMFKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTVYRHDKRIKLQIWD 77 Query: 65 TAGQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFC-QGVPIILVGCK 123 TAGQE Y + Y + L+ + I +S VQ+ W ++ + +ILVG K Sbjct: 78 TAGQERYRTITTAYYRGAMGFLLMYDIANQESFAAVQD-WATQIKTYSWDNAQVILVGNK 136 Query: 124 VDLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFE 177 DL E ++ V +++G+ +AD +G ++E SAK V++VFE Sbjct: 137 CDL------------EDERVVPAEDGRRLADDLGFE-FFEASAKENINVKQVFE 177 >2HEI-A nrPDB Length = 179 Score = 77.4 bits (189), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 54/174 (31%), Positives = 85/174 (48%), Gaps = 20/174 (11%) Query: 12 KLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVA-DVEVDGRRVELALWDTAGQED 70 KLV++G+ A GK+ L++ F KGQF E T+ ++ V +D V+ +WDTAGQE Sbjct: 10 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQER 69 Query: 71 YDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVP---IILVGCKVDLR 127 Y L P+ Y + ++ + I ++ + W+ E+ Q P I L G K DL Sbjct: 70 YHSLAPMYYRGAQAAIVVYDITNQETFARAK-TWVKELQR--QASPSIVIALAGNKADLA 126 Query: 128 NDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATR 181 N ++ V +E Q+ AD + + E SAKT V ++F A + Sbjct: 127 N------------KRMVEYEEAQAYADD-NSLLFMETSAKTAMNVNDLFLAIAK 167 >5YOZ-A nrPDB Length = 177 Score = 77.4 bits (189), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 52/175 (29%), Positives = 91/175 (52%), Gaps = 15/175 (8%) Query: 4 QVGNSIRRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVAD-VEVDGRRVELAL 62 Q+ + K+V++G+ GK+ + + F++ +F T+ +++ V +DGR ++ + Sbjct: 9 QLMEATSAKIVMLGESGAGKSSIALRFTRNEFLANQETTIGAAFLSKTVMIDGRALKYEI 68 Query: 63 WDTAGQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQ-GVPIILVG 121 WDTAG E + L P+ Y ++ L+ + I +SL+ Q WI E+ + I+LVG Sbjct: 69 WDTAGLERFRSLAPIYYRGASGALVVYDITNSESLKKAQ-TWIKELRANADPSLIIVLVG 127 Query: 122 CKVDLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVF 176 K DL + LRQ V+ ++GQ +A + +YE SAK V +VF Sbjct: 128 NKKDLGS-------LRQ-----VSFEDGQRLAAEEQLAAFYEASAKDNNNVEQVF 170 >1D5C-A nrPDB Length = 162 Score = 77.0 bits (188), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 57/170 (33%), Positives = 88/170 (51%), Gaps = 16/170 (9%) Query: 10 RRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVAD-VEVDGRRVELALWDTAGQ 68 + KLV +G+ A GKT ++ F F Y T+ ++++ + +D V L LWDTAGQ Sbjct: 1 KYKLVFLGEQAVGKTSIITRFMYDTFDNNYQSTIGIDFLSKTLYLDEGPVRLQLWDTAGQ 60 Query: 69 EDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLH-FCQGVPIILVGCKVDLR 127 E + L P DS ++ + I S EN KWI ++L+ + V I LVG K DL Sbjct: 61 ERFRSLIPSYIRDSAAAIVVYDITNRQSFENTT-KWIQDILNERGKDVIIALVGNKTDLG 119 Query: 128 NDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFE 177 + LR+ VT +EG A + T ++E SAK G+ ++ +F+ Sbjct: 120 D-------LRK-----VTYEEGMQKAQEYN-TMFHETSAKAGHNIKVLFK 156 >3RAB-A nrPDB Length = 169 Score = 76.6 bits (187), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 47/168 (27%), Positives = 87/168 (51%), Gaps = 16/168 (9%) Query: 12 KLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENY-VADVEVDGRRVELALWDTAGQED 70 K++I+G+ + GKT L ++ F +V TV ++ V + + +R++L +WDTAGQE Sbjct: 7 KILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTAGQER 66 Query: 71 YDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFC-QGVPIILVGCKVDLRND 129 Y + Y + ++ + I +S VQ+ W ++ + ++LVG K D+ Sbjct: 67 YRTITTAYYRGAMGFILMYDITNEESFNAVQD-WSTQIKTYSWDNAQVLLVGNKCDM--- 122 Query: 130 PQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFE 177 E ++ V+S+ G+ +AD +G ++E SAK V++ FE Sbjct: 123 ---------EDERVVSSERGRQLADHLGFE-FFEASAKDNINVKQTFE 160 >2HUP-A nrPDB Length = 201 Score = 76.3 bits (186), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 54/167 (32%), Positives = 84/167 (50%), Gaps = 15/167 (8%) Query: 12 KLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENY-VADVEVDGRRVELALWDTAGQED 70 KLV+VGD + GKTC++ F G F E T+ ++ + +E+ G+RV+L +WDTAGQE Sbjct: 31 KLVLVGDASVGKTCVVQRFKTGAFSERQGSTIGVDFTMKTLEIQGKRVKLQIWDTAGQER 90 Query: 71 YDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFC-QGVPIILVGCKVDLRND 129 + + Y +N ++ + I S +V WI +V + + +L+G K DL Sbjct: 91 FRTITQSYYRSANGAILAYDITKRSSFLSVPH-WIEDVRKYAGSNIVQLLIGNKSDL--- 146 Query: 130 PQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVF 176 +LR+ V+ E QS+A+ E SAK V E F Sbjct: 147 ----SELRE-----VSLAEAQSLAEHYDILCAIETSAKDSSNVEEAF 184 >2IL1-A nrPDB Length = 192 Score = 76.3 bits (186), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 45/167 (26%), Positives = 86/167 (51%), Gaps = 15/167 (8%) Query: 12 KLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENY-VADVEVDGRRVELALWDTAGQED 70 +++I+G GKT L+ F+ F E TV ++ + VE+ G+++ L +WDTAGQE Sbjct: 28 QVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRGKKIRLQIWDTAGQER 87 Query: 71 YDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFC-QGVPIILVGCKVDLRND 129 ++ + Y + +++ + I ++ +++ KW+ + + + ++LVG K+D D Sbjct: 88 FNSITSAYYRSAKGIILVYDITKKETFDDL-PKWMKMIDKYASEDAELLLVGNKLDCETD 146 Query: 130 PQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVF 176 + +T Q+G+ A QI + E SAK + V E+F Sbjct: 147 ------------REITRQQGEKFAQQITGMRFCEASAKDNFNVDEIF 181 >2EW1-A nrPDB Length = 201 Score = 75.9 bits (185), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 50/167 (29%), Positives = 86/167 (51%), Gaps = 16/167 (9%) Query: 12 KLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENY-VADVEVDGRRVELALWDTAGQED 70 K+V++G+ GKTCL+ F++G FP T+ ++ + VE++G +V+L +WDTAGQE Sbjct: 28 KIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWDTAGQER 87 Query: 71 YDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQG-VPIILVGCKVDLRND 129 + + Y +N +++ + I +S + E W+ E+ + V +LVG K+DL Sbjct: 88 FRSITQSYYRSANALILTYDITCEESFRCLPE-WLREIEQYASNKVITVLVGNKIDLAER 146 Query: 130 PQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVF 176 + +Q +E E Q + Y E SAK V ++F Sbjct: 147 REVSQQRAEE------FSEAQDMY-------YLETSAKESDNVEKLF 180 >1Z22-A nrPDB Length = 168 Score = 75.9 bits (185), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 49/173 (28%), Positives = 88/173 (50%), Gaps = 15/173 (8%) Query: 6 GNSIRRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVA-DVEVDGRRVELALWD 64 G+ + K+V+VG+GA GK+ ++ + KG F + Y T+ +++ ++V+ V L LWD Sbjct: 1 GSEVAIKMVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQIQVNDEDVRLMLWD 60 Query: 65 TAGQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVPIILVGCKV 124 TAGQE++D + Y + ++ FS +S E + W +V+ +P LV K+ Sbjct: 61 TAGQEEFDAITKAYYRGAQACVLVFSTTDRESFEAIS-SWREKVVAEVGDIPTALVQNKI 119 Query: 125 DLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFE 177 DL +D + ++E + +A ++ +Y S K V EVF+ Sbjct: 120 DLLDDS------------CIKNEEAEGLAKRLKLR-FYRTSVKEDLNVSEVFK 159 >3CUE-F nrPDB Length = 206 Score = 75.9 bits (185), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 40/125 (32%), Positives = 73/125 (58%), Gaps = 4/125 (3%) Query: 12 KLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENY-VADVEVDGRRVELALWDTAGQED 70 KL+++G+ GK+CLL+ FS + Y+ T+ ++ + VE+DG+ V+L +WDTAGQE Sbjct: 10 KLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWDTAGQER 69 Query: 71 YDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVPI-ILVGCKVDLRND 129 + + Y S+ ++I + + +S V+ W+ E+ + + +LVG K DL+ D Sbjct: 70 FRTITSSYYRGSHGIIIVYDVTDQESFNGVK-MWLQEIDRYATSTVLKLLVGNKCDLK-D 127 Query: 130 PQTIE 134 + +E Sbjct: 128 KRVVE 132 >2KE5-A nrPDB Length = 174 Score = 75.9 bits (185), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 57/168 (33%), Positives = 84/168 (50%), Gaps = 15/168 (8%) Query: 11 RKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDTAGQED 70 K+++VG G GK+ L + F +F E Y PT ++Y V +DG V++ + DTAG ED Sbjct: 4 HKVIMVGSGGVGKSALTLQFMYDEFVEDYEPTKADSYRKKVVLDGEEVQIDILDTAGLED 63 Query: 71 YDRLRPLSYPDSNVVLICFSIDLPDSLENVQE--KWIAEVLHFCQGVPIILVGCKVDLRN 128 Y +R + L+ FSI +S E + I V +P+++VG K DL Sbjct: 64 YAAIRDNYFRSGEGFLLVFSITEHESFTATAEFREQILRVKAEEDKIPLLVVGNKSDL-- 121 Query: 129 DPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVF 176 E+ RQ V +E +S A++ G Y E SAKT V +VF Sbjct: 122 -----EERRQ-----VPVEEARSKAEEWGVQ-YVETSAKTRANVDKVF 158 >4FMC-F nrPDB Length = 117 Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 36/116 (31%), Positives = 71/116 (61%), Gaps = 3/116 (2%) Query: 13 LVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENY-VADVEVDGRRVELALWDTAGQEDY 71 L+++GD GK+CLL+ F+ + E Y+ T+ ++ + +E+DG+ ++L +WDTAGQE + Sbjct: 1 LLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERF 60 Query: 72 DRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFC-QGVPIILVGCKVDL 126 + Y ++ +++ + + +S NV++ W+ E+ + + V +LVG K DL Sbjct: 61 RTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYASENVNKLLVGNKCDL 115 >1YZN-A nrPDB Length = 185 Score = 74.3 bits (181), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 40/125 (32%), Positives = 73/125 (58%), Gaps = 4/125 (3%) Query: 12 KLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENY-VADVEVDGRRVELALWDTAGQED 70 KL+++G+ GK+CLL+ FS + Y+ T+ ++ + VE+DG+ V+L +WDTAGQE Sbjct: 23 KLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWDTAGQER 82 Query: 71 YDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVPI-ILVGCKVDLRND 129 + + Y S+ ++I + + +S V+ W+ E+ + + +LVG K DL+ D Sbjct: 83 FRTITSSYYRGSHGIIIVYDVTDQESFNGVK-MWLQEIDRYATSTVLKLLVGNKCDLK-D 140 Query: 130 PQTIE 134 + +E Sbjct: 141 KRVVE 145 >1X3S-A nrPDB Length = 195 Score = 73.9 bits (180), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 52/169 (30%), Positives = 84/169 (49%), Gaps = 18/169 (10%) Query: 12 KLVIVGDGACGKTCLLIVFSKGQF-PEVYVPTVFENYVADVEVDGRRVELALWDTAGQED 70 K++I+G+ GK+ LL+ F+ F PE+ + V + VDG + +LA+WDTAGQE Sbjct: 17 KILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQER 76 Query: 71 YDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVPII--LVGCKVDLRN 128 + L P Y + V++ + + D+ + + W+ E+ +C I+ LVG K+D N Sbjct: 77 FRTLTPSYYRGAQGVILVYDVTRRDTFVKL-DNWLNELETYCTRNDIVNMLVGNKIDKEN 135 Query: 129 DPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFE 177 + V EG A + + + E SAKT GV+ FE Sbjct: 136 -------------REVDRNEGLKFARK-HSMLFIEASAKTCDGVQCAFE 170 >2F9L-A nrPDB Length = 199 Score = 73.6 bits (179), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 53/168 (31%), Positives = 84/168 (50%), Gaps = 16/168 (9%) Query: 12 KLVIVGDGACGKTCLLIVFSKGQFPEVYVPTV-FENYVADVEVDGRRVELALWDTAGQED 70 K+V++GD GK+ LL F++ +F T+ E ++VDG+ ++ +WDTAGQE Sbjct: 7 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQER 66 Query: 71 YDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVL-HFCQGVPIILVGCKVDLRND 129 Y R+ Y + L+ + I + ENV E+W+ E+ H + I+LVG K DLR Sbjct: 67 YRRITSAYYRGAVGALLVYDIAKHLTYENV-ERWLKELRDHADSNIVIMLVGNKSDLR-- 123 Query: 130 PQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFE 177 LR V + E ++ A++ + E SA V E F+ Sbjct: 124 -----HLR-----AVPTDEARAFAEK-NNLSFIETSALDSTNVEEAFK 160 >4KU4-A nrPDB Length = 206 Score = 73.6 bits (179), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 59/194 (30%), Positives = 88/194 (45%), Gaps = 34/194 (17%) Query: 9 IRRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDTAGQ 68 I K+ ++G+G GKT L + +K F E Y PT+ ++Y +DG L + DTAGQ Sbjct: 13 ITDKIAMLGEGGVGKTSLTVNLTKHVFSETYDPTLEDSYRRQCVIDGIPSHLEILDTAGQ 72 Query: 69 EDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVL-----------HFCQGVP- 116 E+Y LR + + +I F + S E E+ EV+ H P Sbjct: 73 EEYGALREQWIRQNELFVIVFDVTRRSSFE-AAERLFEEVIQTKRKLDETRRHPGDRHPD 131 Query: 117 --------IILVGCKVDLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKT 168 ++LVG K DL + ++ V + EG S+A ++G G+ E SAK Sbjct: 132 DLPFAPSLVVLVGNKCDL------------DTRREVGTLEGSSLAKKLGC-GFVETSAKL 178 Query: 169 GYGVREVFEAATRA 182 G V E F + RA Sbjct: 179 GTNVEEAFFSVVRA 192 >1ZC4-A nrPDB Length = 175 Score = 73.6 bits (179), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 54/168 (32%), Positives = 83/168 (49%), Gaps = 16/168 (9%) Query: 11 RKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDTAGQED 70 K+++VG G GK+ L + F +F E Y PT ++Y V +DG V++ + DTAG ED Sbjct: 7 HKVIMVGSGGVGKSALTLQFMYDEFVEDYEPTKADSYRKKVVLDGEEVQIDILDTAGLED 66 Query: 71 YDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFC--QGVPIILVGCKVDLRN 128 Y +R + L FSI +S + + ++L + VP +LVG K DL Sbjct: 67 YAAIRDNYFRSGEGFLCVFSITEMESFAATAD-FREQILRVKEDENVPFLLVGNKSDL-- 123 Query: 129 DPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVF 176 E ++ V+ +E ++ A+Q Y E SAKT V +VF Sbjct: 124 ----------EDKRQVSVEEAKNRAEQWN-VNYVETSAKTRANVDKVF 160 >1ZBD-A nrPDB Length = 203 Score = 73.6 bits (179), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 46/168 (27%), Positives = 86/168 (51%), Gaps = 16/168 (9%) Query: 12 KLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENY-VADVEVDGRRVELALWDTAGQED 70 K++I+G+ + GKT L ++ F +V TV ++ V + + +R++L +WDTAG E Sbjct: 10 KILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTAGLER 69 Query: 71 YDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFC-QGVPIILVGCKVDLRND 129 Y + Y + ++ + I +S VQ+ W ++ + ++LVG K D+ Sbjct: 70 YRTITTAYYRGAMGFILMYDITNEESFNAVQD-WSTQIKTYSWDNAQVLLVGNKCDM--- 125 Query: 130 PQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFE 177 E ++ V+S+ G+ +AD +G ++E SAK V++ FE Sbjct: 126 ---------EDERVVSSERGRQLADHLGFE-FFEASAKDNINVKQTFE 163 >2N1B-A nrPDB Length = 261 Score = 73.2 bits (178), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 49/177 (27%), Positives = 86/177 (48%), Gaps = 17/177 (9%) Query: 1 MSQQVGNSIRRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTV-FENYVADVEVDGRRVE 59 M+ Q ++ KLV+VGDG GKT + G+F + YV T+ E + + ++ Sbjct: 42 MAAQGEPQVQFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIK 101 Query: 60 LALWDTAGQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVPIIL 119 +WDTAGQE + LR Y + +I F + + +NV W +++ C+ +PI+L Sbjct: 102 FNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNV-PNWHRDLVRVCENIPIVL 160 Query: 120 VGCKVDLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVF 176 G KVD+++ R+ + + +++ YY+ SAK+ Y + F Sbjct: 161 CGNKVDIKD--------RKVKAKSIVFHRKKNLQ-------YYDISAKSNYNFEKPF 202 >5UWI-A nrPDB Length = 237 Score = 72.8 bits (177), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 49/177 (27%), Positives = 86/177 (48%), Gaps = 17/177 (9%) Query: 1 MSQQVGNSIRRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTV-FENYVADVEVDGRRVE 59 M+ Q ++ KLV+VGDG GKT + G+F + YV T+ E + + ++ Sbjct: 22 MAAQGEPQVQFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIK 81 Query: 60 LALWDTAGQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVPIIL 119 +WDTAGQE + LR Y + +I F + + +NV W +++ C+ +PI+L Sbjct: 82 FNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNV-PNWHRDLVRVCENIPIVL 140 Query: 120 VGCKVDLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVF 176 G KVD+++ R+ + + +++ YY+ SAK+ Y + F Sbjct: 141 CGNKVDIKD--------RKVKAKSIVFHRKKNLQ-------YYDISAKSNYNFEKPF 182 >5CLL-A nrPDB Length = 191 Score = 72.8 bits (177), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 50/182 (27%), Positives = 87/182 (47%), Gaps = 17/182 (9%) Query: 1 MSQQVGNSIRRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTV-FENYVADVEVDGRRVE 59 M+ Q ++ KLV+VGDG GKT + G+F + YV T+ E + + ++ Sbjct: 1 MAAQGEPQVQFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIK 60 Query: 60 LALWDTAGQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVPIIL 119 +WDTAGQE + LR Y + +I F + + +NV W +++ C+ +PI+L Sbjct: 61 FNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPN-WHRDLVRVCENIPIVL 119 Query: 120 VGCKVDLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAA 179 G KVD+++ R+ + + +++ YY+ SAK+ Y + F Sbjct: 120 CGNKVDIKD--------RKVKAKSIVFHRKKNLQ-------YYDISAKSNYNFEKPFLWL 164 Query: 180 TR 181 R Sbjct: 165 AR 166 >2ERX-A nrPDB Length = 172 Score = 72.4 bits (176), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 47/168 (27%), Positives = 82/168 (48%), Gaps = 15/168 (8%) Query: 12 KLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDTAGQEDY 71 ++ + G G GK+ L++ F KG F E Y+PTV + Y + D L + DT G + Sbjct: 5 RVAVFGAGGVGKSSLVLRFVKGTFRESYIPTVEDTYRQVISCDKSICTLQITDTTGSHQF 64 Query: 72 DRLRPLSYPDSNVVLICFSIDLPDSLENVQEKW--IAEVLHFCQGVPIILVGCKVDLRND 129 ++ LS + ++ +SI SLE ++ + I E+ + +PI+LVG K D Sbjct: 65 PAMQRLSISKGHAFILVYSITSRQSLEELKPIYEQICEIKGDVESIPIMLVGNKCD---- 120 Query: 130 PQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFE 177 + + V S E +++A + + E SAK + V+E+F+ Sbjct: 121 --------ESPSREVQSSEAEALA-RTWKCAFMETSAKLNHNVKELFQ 159 >4RKE-A nrPDB Length = 176 Score = 72.4 bits (176), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 46/167 (27%), Positives = 85/167 (50%), Gaps = 16/167 (9%) Query: 12 KLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVAD-VEVDGRRVELALWDTAGQED 70 K +I+GD GK+CLL+ F+ +F V+ T+ + A + +DG++++L +WDTAG E Sbjct: 12 KYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGLEA 71 Query: 71 YDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVL-HFCQGVPIILVGCKVDLRND 129 + + Y + L+ + I ++ ++ W+ + H + I+L+G K DL Sbjct: 72 FRSITRSYYRGAAGALLVYDITRRETFNHLT-TWLEDARQHSNSNMVIMLIGNKSDL--- 127 Query: 130 PQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVF 176 + ++ V +EG++ A + G + E SA+T V E F Sbjct: 128 ---------DSRREVKKEEGEAFAREHGLV-FMETSARTAANVEEAF 164 >5XOJ-A nrPDB Length = 182 Score = 71.6 bits (174), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 47/171 (27%), Positives = 82/171 (47%), Gaps = 17/171 (9%) Query: 12 KLVIVGDGACGKTCLLIVFSKGQFPEVYVPTV-FENYVADVEVDGRRVELALWDTAGQED 70 KLV+VGDG GKT + G+F + Y+ T+ E + + ++ +WDTAG E Sbjct: 14 KLVLVGDGGTGKTTFVKRHLTGEFEKKYIATIGVEVHPLSFYTNFGEIKFDVWDTAGLEK 73 Query: 71 YDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVPIILVGCKVDLRNDP 130 + LR Y ++ +I F + + +NV W +++ C+ +PI+L G KVD++ Sbjct: 74 FGGLRDGYYINAQCAIIMFDVTSRITYKNVPN-WHRDLVRVCENIPIVLCGNKVDVKE-- 130 Query: 131 QTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATR 181 R+ + +T +++ YY+ SAK+ Y + F R Sbjct: 131 ------RKVKAKTITFHRKKNLQ-------YYDISAKSNYNFEKPFLWLAR 168 >1Z0F-A nrPDB Length = 179 Score = 70.9 bits (172), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 55/173 (31%), Positives = 85/173 (49%), Gaps = 17/173 (9%) Query: 12 KLVIVGDGACGKTCLLIVFSKGQFPEVYVPTV-FENYVADVEVDGRRVELALWDTAGQED 70 K +I+GD GK+CLL F++ +F T+ E +EV G++++L +WDTAGQE Sbjct: 17 KYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQER 76 Query: 71 YDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQ-GVPIILVGCKVDLRND 129 + + Y + L+ + I S N W+ + + IIL+G K DL Sbjct: 77 FRAVTRSYYRGAAGALMVYDIT-RRSTYNHLSSWLTDARNLTNPNTVIILIGNKADL--- 132 Query: 130 PQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVF-EAATR 181 E Q+ VT +E + A++ G + E SAKTG V + F EAA + Sbjct: 133 ---------EAQRDVTYEEAKQFAEENGLL-FLEASAKTGENVEDAFLEAAKK 175 >3WYF-A nrPDB Length = 219 Score = 70.5 bits (171), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 46/166 (27%), Positives = 81/166 (48%), Gaps = 17/166 (10%) Query: 12 KLVIVGDGACGKTCLLIVFSKGQFPEVYVPTV-FENYVADVEVDGRRVELALWDTAGQED 70 KLV+VGDG GKT + G+F + Y+ T+ E + + ++ +WDTAG E Sbjct: 14 KLVLVGDGGTGKTTFVKRHLTGEFEKKYIATIGVEVHPLSFYTNFGEIKFDVWDTAGLEK 73 Query: 71 YDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVPIILVGCKVDLRNDP 130 + LR Y ++ +I F + + +NV W +++ C+ +PI+L G KVD++ Sbjct: 74 FGGLRDGYYINAQCAIIMFDVTSRITYKNVPN-WHRDLVRVCENIPIVLCGNKVDVKE-- 130 Query: 131 QTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVF 176 R+ + +T +++ YY+ SAK+ Y + F Sbjct: 131 ------RKVKAKTITFHRKKNLQ-------YYDISAKSNYNFEKPF 163 >5FBL-B nrPDB Length = 221 Score = 70.5 bits (171), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 52/168 (30%), Positives = 84/168 (50%), Gaps = 16/168 (9%) Query: 12 KLVIVGDGACGKTCLLIVFSKGQFPEVYVPTV-FENYVADVEVDGRRVELALWDTAGQED 70 K+V++GD GK+ LL F++ +F T+ E ++VDG+ ++ +WDTAGQE Sbjct: 18 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQER 77 Query: 71 YDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVL-HFCQGVPIILVGCKVDLRND 129 Y + Y + L+ + I + ENV E+W+ E+ H + I+LVG K DLR Sbjct: 78 YRAITSAYYRGAVGALLVYDIAKHLTYENV-ERWLKELRDHADSNIVIMLVGNKSDLR-- 134 Query: 130 PQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFE 177 LR V + E ++ A++ G + + E SA V F+ Sbjct: 135 -----HLR-----AVPTDEARAFAEKNGLS-FIETSALDSTNVEAAFQ 171 >1Z06-A nrPDB Length = 189 Score = 70.5 bits (171), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 46/133 (34%), Positives = 71/133 (53%), Gaps = 7/133 (5%) Query: 12 KLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVAD-VEVDGRRVELALWDTAGQED 70 K++++GD GKTCL F G+FP+ T+ ++ V++DG R+++ LWDTAGQE Sbjct: 22 KIIVIGDSNVGKTCLTYRFCAGRFPDRTEATIGVDFRERAVDIDGERIKIQLWDTAGQER 81 Query: 71 YDRLRPLSYPDSNVVLICFSIDLPD--SLENVQEKWIAEVLH--FCQGVPIILVGCKVDL 126 + R + + NV + F D+ + S ++ WI E +P ILVG K DL Sbjct: 82 F-RKSMVQHYYRNVHAVVFVYDMTNMASFHSL-PAWIEECKQHLLANDIPRILVGNKCDL 139 Query: 127 RNDPQTIEQLRQE 139 R+ Q L Q+ Sbjct: 140 RSAIQVPTDLAQK 152 >2G77-B nrPDB Length = 198 Score = 69.7 bits (169), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 45/132 (34%), Positives = 69/132 (52%), Gaps = 5/132 (3%) Query: 12 KLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVAD-VEVDGRRVELALWDTAGQED 70 K++++GD GKTCL F G+FP+ T+ ++ V++DG R+++ LWDTAGQE Sbjct: 31 KIIVIGDSNVGKTCLTYRFCAGRFPDRTEATIGVDFRERAVDIDGERIKIQLWDTAGQER 90 Query: 71 YDRLRPLSYPDSNVVLICFSIDLPDSLE-NVQEKWIAEVLH--FCQGVPIILVGCKVDLR 127 + R + + NV + F D+ + + WI E +P ILVG K DLR Sbjct: 91 F-RKSMVQHYYRNVHAVVFVYDMTNMASFHSLPAWIEECKQHLLANDIPRILVGNKCDLR 149 Query: 128 NDPQTIEQLRQE 139 + Q L Q+ Sbjct: 150 SAIQVPTDLAQK 161 >4PHF-A nrPDB Length = 184 Score = 68.9 bits (167), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 47/180 (26%), Positives = 86/180 (47%), Gaps = 19/180 (10%) Query: 12 KLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVA-DVEVDGRRVE-LALWDTAGQE 69 K++I+GD GKT L+ + ++ Y T+ +++ +V VDG +V + +WDTAGQE Sbjct: 12 KVIILGDSGVGKTSLMHRYVNDKYSCQYKATIGADFLTKEVTVDGDKVATMQVWDTAGQE 71 Query: 70 DYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFC-----QGVPIILVGCKV 124 + L Y ++ ++ + + S EN++ W E L + P +++G K+ Sbjct: 72 RFQSLGVAFYRGADCCVLVYDVTNASSFENIKS-WRDEFLVHANVNSPETFPFVILGNKI 130 Query: 125 DLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRASL 184 D +E ++ V+ + Q +A +G + SAK V FE R++L Sbjct: 131 D-----------AEESKKIVSEKSAQELAKSLGDIPLFLTSAKNAINVDTAFEEIARSAL 179 >6HUF-A nrPDB Length = 182 Score = 68.6 bits (166), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 47/169 (27%), Positives = 84/169 (49%), Gaps = 17/169 (10%) Query: 12 KLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVAD-VEVDGRRVELALWDTAGQED 70 K + +GD GKT +L ++ G+F ++ TV ++ + + +R++L LWDTAG E Sbjct: 11 KFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKTIYRNDKRIKLQLWDTAGLER 70 Query: 71 YDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEV-LH-FCQGVPIILVGCKVDLRN 128 + L + D+ L+ F + +S NV+ WI+++ H + + I+L G K DL Sbjct: 71 FRSLTTAFFRDAMGFLLLFDLTNEESFLNVR-NWISQLKTHAYSENPDIVLCGNKSDL-- 127 Query: 129 DPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFE 177 E ++ V + E + +A+ G Y+E SA G + + E Sbjct: 128 ----------EDERVVAAAEARQLAEHYGIP-YFETSAANGTNISQAIE 165 >3T5G-A nrPDB Length = 181 Score = 68.6 bits (166), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 51/169 (30%), Positives = 89/169 (52%), Gaps = 18/169 (10%) Query: 11 RKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDTAGQED 70 RK+ I+G + GK+ L I F +GQF + Y PT+ + + V+G+ L L DTAGQ++ Sbjct: 7 RKIAILGYRSVGKSSLTIQFVEGQFVDSYDPTIENTFTKLITVNGQEYHLQLVDTAGQDE 66 Query: 71 YDRLRPLSYP-DSNVVLICFSIDLPDSLENVQ--EKWIAEVLHFCQGVPIILVGCKVDLR 127 Y + P +Y D N ++ +S+ S E ++ + +++ Q +PI+LVG K DL Sbjct: 67 YS-IFPQTYSIDINGYILVYSVTSIKSFEVIKVIHGKLLDMVGKVQ-IPIMLVGNKKDLH 124 Query: 128 NDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVF 176 ++ ++ +EG+++A+ A + E SAK +VF Sbjct: 125 M------------ERVISYEEGKALAESWNA-AFLESSAKENQTAVDVF 160 >2F7S-A nrPDB Length = 217 Score = 68.2 bits (165), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 50/179 (27%), Positives = 83/179 (46%), Gaps = 27/179 (15%) Query: 12 KLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEV-----------DGRRVEL 60 KL+ +GD GKT L ++ +F ++ TV ++ V +V L Sbjct: 27 KLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVHL 86 Query: 61 ALWDTAGQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVL--HFCQGVPII 118 LWDTAGQE + L + D+ L+ F + S NV+ W++++ +C+ I+ Sbjct: 87 QLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVR-NWMSQLQANAYCENPDIV 145 Query: 119 LVGCKVDLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFE 177 L+G K DL + Q+ V ++ + +AD+ G Y+E SA TG V + E Sbjct: 146 LIGNKADLPD------------QREVNERQARELADKYGIP-YFETSAATGQNVEKAVE 191 >4UJ4-A nrPDB Length = 185 Score = 67.8 bits (164), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 51/168 (30%), Positives = 83/168 (49%), Gaps = 16/168 (9%) Query: 12 KLVIVGDGACGKTCLLIVFSKGQFPEVYVPTV-FENYVADVEVDGRRVELALWDTAGQED 70 K+V++GD GK+ LL F++ +F T+ E ++VDG+ ++ +WDTAG E Sbjct: 12 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGLER 71 Query: 71 YDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVL-HFCQGVPIILVGCKVDLRND 129 Y + Y + L+ + I + ENV E+W+ E+ H + I+LVG K DLR Sbjct: 72 YRAITSAYYRGAVGALLVYDIAKHLTYENV-ERWLKELRDHADSNIVIMLVGNKSDLR-- 128 Query: 130 PQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFE 177 LR V + E ++ A++ G + + E SA V F+ Sbjct: 129 -----HLR-----AVPTDEARAFAEKNGLS-FIETSALDSTNVEAAFQ 165 >5UB8-A nrPDB Length = 222 Score = 67.8 bits (164), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 42/117 (35%), Positives = 64/117 (54%), Gaps = 3/117 (2%) Query: 12 KLVIVGDGACGKTCLLIVFSKGQFPEVYVPTV-FENYVADVEVDGRRVELALWDTAGQED 70 K+V++GD GK+ LL F++ +F T+ E +E+DG+RV+ +WDTAGQE Sbjct: 17 KIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGKRVKAQIWDTAGQER 76 Query: 71 YDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVL-HFCQGVPIILVGCKVDL 126 Y + Y + LI + I +S E+V +W+ E+ H + I LVG K DL Sbjct: 77 YRAITSAYYRGAVGALIVYDIAKTESYESVS-RWLKELKEHADANIIIELVGNKSDL 132 >3BC1-A nrPDB Length = 195 Score = 67.8 bits (164), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 50/179 (27%), Positives = 83/179 (46%), Gaps = 27/179 (15%) Query: 12 KLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEV-----------DGRRVEL 60 K + +GD GKT +L ++ G+F ++ TV ++ V G+R+ L Sbjct: 13 KFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKRVVYRANGPDGAVGRGQRIHL 72 Query: 61 ALWDTAGQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEV-LH-FCQGVPII 118 LWDTAG E + L + D+ L+ F + S NV+ WI+++ +H + + I+ Sbjct: 73 QLWDTAGLERFRSLTTAFFRDAMGFLLLFDLTNEQSFLNVR-NWISQLQMHAYSENPDIV 131 Query: 119 LVGCKVDLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFE 177 L G K DL E Q+ V +E + +A++ G Y+E SA G + E Sbjct: 132 LCGNKSDL------------EDQRAVKEEEARELAEKYGIP-YFETSAANGTNISHAIE 177 >2ERY-A nrPDB Length = 172 Score = 67.0 bits (162), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 50/161 (31%), Positives = 74/161 (45%), Gaps = 16/161 (9%) Query: 23 KTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDTAGQEDYDRLRPLSYPDS 82 K+ L I F + F Y PT+ ++Y +D R L + DTAGQE++ +R Sbjct: 18 KSALTIQFIQSYFVTDYDPTIEDSYTKQCVIDDRAARLDILDTAGQEEFGAMREQYMRTG 77 Query: 83 NVVLICFSIDLPDSLENVQEKWIAEVLHFCQG--VPIILVGCKVDLRNDPQTIEQLRQEG 140 L+ FS+ S E + K+ ++L P+IL+G K DL + Sbjct: 78 EGFLLVFSVTDRGSFEEIY-KFQRQILRVKDRDEFPMILIGNKADL------------DH 124 Query: 141 QQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATR 181 Q+ VT +EGQ +A Q+ T Y E SAK V + F R Sbjct: 125 QRQVTQEEGQQLARQLKVT-YMEASAKIRMNVDQAFHELVR 164 >2IEY-A nrPDB Length = 195 Score = 66.6 bits (161), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 51/179 (28%), Positives = 86/179 (48%), Gaps = 27/179 (15%) Query: 12 KLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENY-----VADVE-VDGR-----RVEL 60 KL+ +GD GKT L ++ +F ++ TV ++ V D + DG +V L Sbjct: 13 KLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYDTQGADGASGKAFKVHL 72 Query: 61 ALWDTAGQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVL--HFCQGVPII 118 LWDTAG E + L + D+ L+ F + S NV+ W++++ +C+ I+ Sbjct: 73 QLWDTAGLERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVR-NWMSQLQANAYCENPDIV 131 Query: 119 LVGCKVDLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFE 177 L+G K DL + Q+ V ++ + +A++ G Y+E SA TG V + E Sbjct: 132 LIGNKADLPD------------QREVNERQARELAEKYGIP-YFETSAATGQNVEKSVE 177 >2FG5-A nrPDB Length = 192 Score = 66.6 bits (161), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 49/179 (27%), Positives = 87/179 (48%), Gaps = 17/179 (9%) Query: 6 GNSIRR-KLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVE-LALW 63 G++IR K+ ++GD GK+ ++ F + F PT+ +++ G + +W Sbjct: 18 GSAIRELKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIW 77 Query: 64 DTAGQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVL-HFCQGVPIILVGC 122 DTAGQE + L P+ Y S +I + I DS ++ KW+ E+ H + + + + G Sbjct: 78 DTAGQERFHSLAPMYYRGSAAAVIVYDITKQDSFYTLK-KWVKELKEHGPENIVMAIAGN 136 Query: 123 KVDLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATR 181 K DL + +R+ V ++ + A+ IGA E SAK + E+F+ +R Sbjct: 137 KCDLSD-------IRE-----VPLKDAKEYAESIGAI-VVETSAKNAINIEELFQGISR 182 >2IEZ-A nrPDB Length = 220 Score = 66.2 bits (160), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 51/179 (28%), Positives = 86/179 (48%), Gaps = 27/179 (15%) Query: 12 KLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENY-----VADVE-VDGR-----RVEL 60 KL+ +GD GKT L ++ +F ++ TV ++ V D + DG +V L Sbjct: 13 KLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYDTQGADGASGKAFKVHL 72 Query: 61 ALWDTAGQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVL--HFCQGVPII 118 LWDTAG E + L + D+ L+ F + S NV+ W++++ +C+ I+ Sbjct: 73 QLWDTAGLERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVR-NWMSQLQANAYCENPDIV 131 Query: 119 LVGCKVDLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFE 177 L+G K DL + Q+ V ++ + +A++ G Y+E SA TG V + E Sbjct: 132 LIGNKADLPD------------QREVNERQARELAEKYGIP-YFETSAATGQNVEKSVE 177 >2ATV-A nrPDB Length = 196 Score = 66.2 bits (160), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 54/175 (30%), Positives = 81/175 (46%), Gaps = 14/175 (8%) Query: 3 QQVGNSIRRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELAL 62 Q + S KL I G GK+ L++ F +F Y PT+ Y +D V + + Sbjct: 21 QSMAKSAEVKLAIFGRAGVGKSALVVRFLTKRFIWEYDPTLESTYRHQATIDDEVVSMEI 80 Query: 63 WDTAGQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVPIILVGC 122 DTAGQED + VL+ D E + K I + + + V +ILVG Sbjct: 81 LDTAGQEDTIQREGHMRWGEGFVLVYDITDRGSFEEVLPLKNILDEIKKPKNVTLILVGN 140 Query: 123 KVDLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYG-VREVF 176 K DL + Q V+++EG+ +A ++ A +YECSA TG G + E+F Sbjct: 141 KADLDHSRQ------------VSTEEGEKLATEL-ACAFYECSACTGEGNITEIF 182 >3CPJ-B nrPDB Length = 223 Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 39/117 (33%), Positives = 61/117 (52%), Gaps = 3/117 (2%) Query: 12 KLVIVGDGACGKTCLLIVFSKGQFPEVYVPTV-FENYVADVEVDGRRVELALWDTAGQED 70 K+V++GD GK+ LL F+K +F T+ E +E++G+R++ +WDTAGQE Sbjct: 15 KIVLIGDSGVGKSNLLSRFTKNEFNMDSKSTIGVEFATRTLEIEGKRIKAQIWDTAGQER 74 Query: 71 YDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFC-QGVPIILVGCKVDL 126 Y + Y + LI + I S EN W++E+ V + L+G K DL Sbjct: 75 YRAITSAYYRGAVGALIVYDISKSSSYENCNH-WLSELRENADDNVAVGLIGNKSDL 130 >6IYB-A nrPDB Length = 199 Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 47/179 (26%), Positives = 83/179 (46%), Gaps = 21/179 (11%) Query: 12 KLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVA-DVEVDGRRVELALWDTAGQED 70 K++I+GD GKT L+ + +F Y T+ +++ +V VD R V + +WDTAG E Sbjct: 15 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGLER 74 Query: 71 YDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVL-----HFCQGVPIILVGCKVD 125 + Y ++ ++ F + P++ + + + W E L + P +++G K+D Sbjct: 75 FQSGVAF-YRGADCCVLVFDVTAPNTFKTL-DSWRDEFLIQASPRDPENFPFVVLGNKID 132 Query: 126 LRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRASL 184 L N RQ V ++ Q+ Y+E SAK V + F+ R +L Sbjct: 133 LEN--------RQ-----VATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNAL 178 >3OES-A nrPDB Length = 201 Score = 63.9 bits (154), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 54/161 (33%), Positives = 82/161 (50%), Gaps = 20/161 (12%) Query: 11 RKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDTAGQED 70 RK+VI+G GKT L F +G+F E Y PTV Y V + L L DTAGQ++ Sbjct: 25 RKVVILGYRCVGKTSLAHQFVEGEFSEGYDPTVENTYSKIVTLGKDEFHLHLVDTAGQDE 84 Query: 71 YDRLRPLSY-PDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQG---VPIILVGCKVDL 126 Y L P S+ + ++ +S+ S + ++ + + LH G VP++LVG K DL Sbjct: 85 YSIL-PYSFIIGVHGYVLVYSVTSLHSFQVIESLY--QKLHEGHGKTRVPVVLVGNKADL 141 Query: 127 RNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAK 167 P ++ V + EG+ +A+ GAT + E SA+ Sbjct: 142 --SP----------EREVQAVEGKKLAESWGAT-FMESSAR 169 >5XR6-A nrPDB Length = 194 Score = 63.5 bits (153), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 38/119 (31%), Positives = 63/119 (52%), Gaps = 3/119 (2%) Query: 12 KLVIVGDGACGKTCLLIVFSKGQFPEVYVPTV-FENYVADVEVDGRRVELALWDTAGQED 70 KLV++GD GK+ LL F+K +F T+ E +V+G+ V+ +WDTAGQE Sbjct: 27 KLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTTKVEGKVVKAQIWDTAGQER 86 Query: 71 YDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVL-HFCQGVPIILVGCKVDLRN 128 Y + Y + L+ + + + EN +W+ E+ H + ++L+G K DLR+ Sbjct: 87 YRAITSAYYRGAVGALLIYDVTRHATFENAA-RWLRELRGHTDPNIVVMLIGNKCDLRH 144 >5WDQ-A nrPDB Length = 170 Score = 60.8 bits (146), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 56/177 (31%), Positives = 82/177 (46%), Gaps = 15/177 (8%) Query: 6 GNSIRRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDT 65 G+ KLV+VG G GK+ L I + F + Y PT+ ++Y V +DG L + DT Sbjct: 3 GHMTEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDT 62 Query: 66 AGQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENV-QEKWIAEVLHFCQGVPIILVGCKV 124 AGQE+Y +R L F+I+ S E++ Q + + + VP++LVG K Sbjct: 63 AGQEEYSAMRDQYMRTGEGFLCVFAINNTKSFEDIHQYREQIKRVKDSDDVPMVLVGNKC 122 Query: 125 DLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATR 181 D + V S++ Q +A G Y E SAKT GV + F R Sbjct: 123 DA-------------AARTVESRQAQDLARSYG-IPYIETSAKTRQGVEDAFYTLVR 165 >5WDR-A nrPDB Length = 171 Score = 60.5 bits (145), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 50/161 (31%), Positives = 72/161 (44%), Gaps = 16/161 (9%) Query: 23 KTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDTAGQEDYDRLRPLSYPDS 82 K+ L I + F Y PT+ ++Y V +D L + DTAGQEDY +R Sbjct: 20 KSALTIQLIQQHFVTEYDPTIEDSYRKHVSIDDEACLLDILDTAGQEDYSAMRDQYMRTG 79 Query: 83 NVVLICFSIDLPDSLENVQEKWIAEVLHFCQG--VPIILVGCKVDLRNDPQTIEQLRQEG 140 L +SID SL+ + + ++L VP+ILVG K DL E Sbjct: 80 EGFLCVYSIDSQQSLDEIH-SFREQILRVKDQDEVPMILVGNKCDL------------EE 126 Query: 141 QQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATR 181 + V+++ GQ+VA + + E SAK V E F R Sbjct: 127 HREVSTEAGQAVAKSY-SIPFMETSAKKRINVEEAFYQLVR 166 >3BFK-A nrPDB Length = 181 Score = 60.5 bits (145), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 38/120 (31%), Positives = 64/120 (53%), Gaps = 4/120 (3%) Query: 12 KLVIVGDGACGKTCLLIVFSKGQFPEVYVPTV-FENYVADVEVDGRRVELA-LWDTAGQE 69 K+V++GD GK+ LL F++ +F T+ E +++ ++ A +WDTAGQE Sbjct: 9 KIVLIGDSGVGKSNLLSRFTRDEFNLESKSTIGVEFATKSIQLKNNKIIKAQIWDTAGQE 68 Query: 70 DYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFC-QGVPIILVGCKVDLRN 128 Y + Y + L+ + I +S EN+ EKW+ E+ + I+LVG K DL++ Sbjct: 69 RYRAITSAYYRGAVGALLVYDITKKNSFENI-EKWLKELRDNADSNIVILLVGNKSDLKH 127 >2FN4-A nrPDB Length = 181 Score = 59.7 bits (143), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 59/177 (33%), Positives = 80/177 (45%), Gaps = 22/177 (12%) Query: 11 RKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDTAGQED 70 KLV+VG G GK+ L I F + F Y PT+ ++Y VDG L + DTAGQE+ Sbjct: 10 HKLVVVGGGGVGKSALTIQFIQSYFVSDYDPTIEDSYTKICSVDGIPARLDILDTAGQEE 69 Query: 71 YDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFC--QGVPIILVGCKVDLRN 128 + +R + L+ F+I+ S V K ++L P++LVG K DL Sbjct: 70 FGAMREQYMRAGHGFLLVFAINDRQSFNEVG-KLFTQILRVKDRDDFPVVLVGNKADL-- 126 Query: 129 DPQTIEQLRQEGQQPVTSQEGQSVADQIGAT---GYYECSAKTGYGVREVFEAATRA 182 E Q+ V E A GA+ Y+E SAK V E FE RA Sbjct: 127 ----------ESQRQVPRSE----ASAFGASHHVAYFEASAKLRLNVDEAFEQLVRA 169 >2BMD-A nrPDB Length = 186 Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 50/175 (28%), Positives = 77/175 (44%), Gaps = 16/175 (9%) Query: 12 KLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADV-EVDGRRVELALWDTAGQED 70 K +++G+ GK+CLL F + +F + T+ + + + V G+ V+L +WDTAGQE Sbjct: 12 KFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWDTAGQER 71 Query: 71 YDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFC-QGVPIILVGCKVDLRND 129 + + Y + L+ + I ++ N W+ + Q + IIL G K DL D Sbjct: 72 FRSVTRSYYRGAAGALLVYDITSRETY-NALTNWLTDARMLASQNIVIILCGNKKDLDAD 130 Query: 130 PQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRASL 184 + VT E A Q + E SA TG V E F R L Sbjct: 131 ------------REVTFLEASRFA-QENELMFLETSALTGENVEEAFVQCARKIL 172 >1YVD-A nrPDB Length = 169 Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 42/172 (24%), Positives = 79/172 (45%), Gaps = 16/172 (9%) Query: 12 KLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVAD-VEVDGRRVELALWDTAGQED 70 K+ ++GD GK+ ++ F + F PT+ +++ V+ + +WDTAGQE Sbjct: 7 KVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQER 66 Query: 71 YDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVL-HFCQGVPIILVGCKVDLRND 129 + L P+ Y S +I + I ++ ++ W+ E+ H + + + G K DL + Sbjct: 67 FRALAPMYYRGSAAAIIVYDITKEETFSTLK-NWVRELRQHGPPSIVVAIAGNKCDLTDV 125 Query: 130 PQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATR 181 + +E ++ + AD I A + E SAK + E+F +R Sbjct: 126 REVME------------RDAKDYADSIHAI-FVETSAKNAININELFIEISR 164 >4WA7-A nrPDB Length = 170 Score = 57.0 bits (136), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 49/169 (28%), Positives = 75/169 (44%), Gaps = 17/169 (10%) Query: 23 KTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDTAGQEDYDRLRPLSYPDS 82 K+ L I + F + Y PT+ ++Y V +DG L + DTAG E+Y +R Sbjct: 17 KSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGLEEYSAMRDQYMRTG 76 Query: 83 NVVLICFSIDLPDSLENVQE--KWIAEVLHFCQGVPIILVGCKVDLRNDPQTIEQLRQEG 140 L F+I+ S E++ + I V + VP++LVG K DL + Sbjct: 77 EGFLCVFAINNTKSFEDIHHYREQIKRVKD-SEDVPMVLVGNKCDLPS------------ 123 Query: 141 QQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRASLMGKSK 189 + V +++ Q +A G + E SAKT GV + F R K K Sbjct: 124 -RTVDTKQAQDLARSYGIP-FIETSAKTRQGVDDAFYTLVREIRKHKEK 170 >3RAP-R nrPDB Length = 167 Score = 56.6 bits (135), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 49/161 (30%), Positives = 82/161 (50%), Gaps = 16/161 (9%) Query: 23 KTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDTAGQEDYDRLRPLSYPDS 82 K+ L + F G F E Y PT+ + Y ++EVD L + DTAG E + +R L + Sbjct: 16 KSALTVQFVTGTFIEKYDPTIEDFYRKEIEVDSSPSVLEILDTAGTEQFASMRDLYIKNG 75 Query: 83 NVVLICFSIDLPDSLENVQ--EKWIAEVLHFCQGVPIILVGCKVDLRNDPQTIEQLRQEG 140 ++ +S+ S ++++ I V + + VP+ILVG KVDL + Sbjct: 76 QGFILVYSLVNQQSFQDIKPMRDQIIRVKRY-EKVPVILVGNKVDLES------------ 122 Query: 141 QQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATR 181 ++ V+S EG+++A++ G + E SAK+ V E+F R Sbjct: 123 EREVSSSEGRALAEEWGCP-FMETSAKSKTMVDELFAEIVR 162 >2O52-A nrPDB Length = 200 Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 50/175 (28%), Positives = 77/175 (44%), Gaps = 16/175 (9%) Query: 12 KLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADV-EVDGRRVELALWDTAGQED 70 K +++G GK+CLL F + +F + T+ + + V V G+ V+L +WDTAGQE Sbjct: 27 KFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWDTAGQER 86 Query: 71 YDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQ-GVPIILVGCKVDLRND 129 + + Y + L+ + I ++ N W+ + + +IL G K DL D Sbjct: 87 FRSVTRSYYRGAAGALLVYDITSRETY-NSLAAWLTDARTLASPNIVVILCGNKKDL--D 143 Query: 130 PQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRASL 184 P ++ VT E A Q + E SA TG V E F R L Sbjct: 144 P----------EREVTFLEASRFA-QENELMFLETSALTGENVEEAFLKCARTIL 187 >3CON-A nrPDB Length = 190 Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 47/161 (29%), Positives = 70/161 (43%), Gaps = 17/161 (10%) Query: 23 KTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDTAGQEDYDRLRPLSYPDS 82 K+ L I + F + Y PT+ ++Y V +DG L + DTAGQE+Y +R Sbjct: 34 KSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTG 93 Query: 83 NVVLICFSIDLPDSLE--NVQEKWIAEVLHFCQGVPIILVGCKVDLRNDPQTIEQLRQEG 140 L F+I+ S N+ + I V VP++LVG K DL Sbjct: 94 EGFLCVFAINNSKSFADINLYREQIKRVKD-SDDVPMVLVGNKCDLPT------------ 140 Query: 141 QQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATR 181 + V +++ +A G + E SAKT GV + F R Sbjct: 141 -RTVDTKQAHELAKSYGIP-FIETSAKTRQGVEDAFYTLVR 179 >5UHV-A nrPDB Length = 166 Score = 54.7 bits (130), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 47/161 (29%), Positives = 70/161 (43%), Gaps = 17/161 (10%) Query: 23 KTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDTAGQEDYDRLRPLSYPDS 82 K+ L I + F + Y PT+ ++Y V +DG L + DTAGQE+Y +R Sbjct: 16 KSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTG 75 Query: 83 NVVLICFSIDLPDSLE--NVQEKWIAEVLHFCQGVPIILVGCKVDLRNDPQTIEQLRQEG 140 L F+I+ S N+ + I V VP++LVG K DL Sbjct: 76 EGFLCVFAINNSKSFADINLYREQIKRVKD-SDDVPMVLVGNKCDLPT------------ 122 Query: 141 QQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATR 181 + V +++ +A G + E SAKT GV + F R Sbjct: 123 -RTVDTKQAHELAKSYG-IPFIETSAKTRQGVEDAFYTLVR 161 >3RWM-B nrPDB Length = 185 Score = 54.7 bits (130), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 36/117 (30%), Positives = 57/117 (48%), Gaps = 3/117 (2%) Query: 12 KLVIVGDGACGKTCLLIVFSKGQFPEVYVPTV-FENYVADVEVDGRRVELALWDTAGQED 70 K+V++GD GK+ LL F+ +F T+ E +EV+ ++++ +WDTAG E Sbjct: 12 KIVLIGDSGVGKSNLLSRFTTDEFNIESKSTIGVEFATRTIEVENKKIKAQIWDTAGLER 71 Query: 71 YDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFC-QGVPIILVGCKVDL 126 Y + Y + LI + I S EN W+ E+ V + L+G K DL Sbjct: 72 YRAITSAYYRGAVGALIVYDISKSSSYENCNH-WLTELRENADDNVAVGLIGNKSDL 127 >3PIR-A nrPDB Length = 183 Score = 53.1 bits (126), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 53/158 (33%), Positives = 82/158 (51%), Gaps = 16/158 (10%) Query: 12 KLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDTAGQEDY 71 KLV+VGDG GK+ L I F + F Y PT+ ++Y+ E+D + L + DTAGQE++ Sbjct: 20 KLVVVGDGGVGKSALTIQFFQKIFVPEYDPTIEDSYLKHTEIDNQWAILDVLDTAGQEEF 79 Query: 72 DRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFC--QGVPIILVGCKVDLRND 129 +R + LI +S+ S E+V +++ +L + P+ILV KVDL + Sbjct: 80 SAMREQYMRTGDGFLIVYSVTDKASFEHV-DRFHQLILRVKDRESFPMILVANKVDLMH- 137 Query: 130 PQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAK 167 LR+ VT +G+ +A + Y E SAK Sbjct: 138 ------LRK-----VTRDQGKEMATKYN-IPYIETSAK 163 >4DJT-A nrPDB Length = 218 Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 41/162 (25%), Positives = 78/162 (48%), Gaps = 17/162 (10%) Query: 12 KLVIVGDGACGKTCLLIVFSKGQFPEVYVPTV--FENYVADVEVDGRRVELALWDTAGQE 69 K+ ++GDG GKT + G+F + Y TV + V ++ G ++ +WDTAGQE Sbjct: 13 KICLIGDGGVGKTTYINRVLDGRFEKNYNATVGAVNHPVTFLDDQGNVIKFNVWDTAGQE 72 Query: 70 DYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQG-VPIILVGCKVDLRN 128 L+ + Y ++ ++ F + + +N+ +W+ E PI++ K+D++N Sbjct: 73 KKAVLKDVYYIGASGAILFFDVTSRITCQNLA-RWVKEFQAVVGNEAPIVVCANKIDIKN 131 Query: 129 DPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGY 170 + ++L E +G++ Y+E SAKT + Sbjct: 132 RQKISKKLVME------VLKGKNYE-------YFEISAKTAH 160 >6FF8-A nrPDB Length = 181 Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 46/170 (27%), Positives = 76/170 (44%), Gaps = 20/170 (11%) Query: 12 KLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADV-EVDGRR-VELALWDTAGQE 69 K++++G+ GKT ++ + F + Y T+ ++ V D R V L LWD AG E Sbjct: 10 KVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGLE 69 Query: 70 DYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEV---LHFCQGVPI--ILVGCKV 124 + + + Y ++ + F I + E V KW +++ +H G PI +L+ K Sbjct: 70 RFGNMTRVYYKEAVGAFVVFDISRSSTFEAVL-KWKSDLDSKVHLPNGSPIPAVLLANKC 128 Query: 125 DLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVRE 174 D Q + Q P SQ Q + G G++E SAK + E Sbjct: 129 D---------QNKDSSQSP--SQVDQFCKEH-GFAGWFETSAKDNINIEE 166 >4CZ2-A nrPDB Length = 230 Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 44/174 (25%), Positives = 75/174 (43%), Gaps = 28/174 (16%) Query: 12 KLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADV-EVDGRR-VELALWDTAGQE 69 K++++G+ GKT ++ + F + Y T+ ++ V D R V L LWD AG E Sbjct: 32 KVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGLE 91 Query: 70 DYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEV---LHFCQGVPI--ILVGCKV 124 + + + Y ++ + F I + E V KW +++ +H G PI +L+ K Sbjct: 92 RFGNMTRVYYKEAMGAFVVFDISRSSTFEAVL-KWKSDLDSKVHLPNGSPIPAVLLANKC 150 Query: 125 DLRND----PQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVRE 174 D D P ++Q +E G G++E SAK + E Sbjct: 151 DQNKDSSMSPSQMDQFCKEH----------------GFAGWFETSAKDNINIEE 188 >3TSO-A nrPDB Length = 178 Score = 50.8 bits (120), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 49/174 (28%), Positives = 75/174 (43%), Gaps = 28/174 (16%) Query: 12 KLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELA-------LWD 64 K+V++G+ GKT LL F++ +F T+ VE R V L +WD Sbjct: 12 KVVLIGESGVGKTNLLSRFTRNEFSHDSRTTI------GVEFSTRTVMLGTAAVKAQIWD 65 Query: 65 TAGQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVL-HFCQGVPIILVGCK 123 TAG E Y + Y + L+ F + + V E+W+ E+ H + ++LVG K Sbjct: 66 TAGLERYRAITSAYYRGAVGALLVFDLTKHQTYA-VVERWLKELYDHAEATIVVMLVGNK 124 Query: 124 VDLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFE 177 DL Q R+ V ++E + A+ G + E SA V FE Sbjct: 125 SDL-------SQARE-----VPTEEARMFAENNGLL-FLETSALDSTNVELAFE 165 >3E5H-A nrPDB Length = 178 Score = 50.1 bits (118), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 37/129 (28%), Positives = 69/129 (53%), Gaps = 6/129 (4%) Query: 6 GNSIRR-KLVIVGDGACGKTCLLIVFSKGQFPEVYVPTV-FENYVADVEVDGR-RVELAL 62 G+ +R+ K+V++GDGA GKT L F++ F + Y T+ + ++ + + G V L + Sbjct: 1 GSHMRQLKIVVLGDGASGKTSLTTCFAQETFGKQYKQTIGLDFFLRRITLPGNLNVTLQI 60 Query: 63 WDTAGQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKW--IAEVLHFCQGVPII-L 119 WD GQ ++ + VL+ + I S EN+++ + + +V + P++ L Sbjct: 61 WDIGGQTIGGKMLDKYIYGAQGVLLVYDITNYQSFENLEDWYTVVKKVSEESETQPLVAL 120 Query: 120 VGCKVDLRN 128 VG K+DL + Sbjct: 121 VGNKIDLEH 129 >3CBQ-A nrPDB Length = 195 Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 50/175 (28%), Positives = 75/175 (42%), Gaps = 20/175 (11%) Query: 12 KLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFEN-YVADVEVDGRRVELALWDTAGQED 70 K+++VG+ GK+ L F Q + P E+ Y + VD V L ++D Q D Sbjct: 25 KVMLVGESGVGKSTLAGTFGGLQGDSAHEPENPEDTYERRIMVDKEEVTLVVYDIWEQGD 84 Query: 71 YDR-LRPLSYPDSNVVLICFSIDLPDSLENVQEKWI---AEVLHFCQGVPIILVGCKVDL 126 LR + LI FS+ S V E + A H +P+ILVG K DL Sbjct: 85 AGGWLRDHCLQTGDAFLIVFSVTDRRSFSKVPETLLRLRAGRPH--HDLPVILVGNKSDL 142 Query: 127 RNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATR 181 + V+ +EG+ +A + + + E SA + RE+FE A R Sbjct: 143 AR------------SREVSLEEGRHLAGTL-SCKHIETSAALHHNTRELFEGAVR 184 >3CLV-A nrPDB Length = 208 Score = 47.4 bits (111), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 30/120 (25%), Positives = 53/120 (44%), Gaps = 16/120 (13%) Query: 57 RVELALWDTAGQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVP 116 ++ +WDTAGQE Y + PL Y + ++ F I ++L+ + W+ + L Sbjct: 92 NIKFDIWDTAGQERYASIVPLYYRGATCAIVVFDISNSNTLDRAKT-WVNQ-LKISSNYI 149 Query: 117 IILVGCKVDLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVF 176 IILV K+D I ++++ Q + + SAKTG ++ +F Sbjct: 150 IILVANKIDKNKFQVDILEVQKYAQD--------------NNLLFIQTSAKTGTNIKNIF 195 >5XC3-A nrPDB Length = 176 Score = 47.0 bits (110), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 30/118 (25%), Positives = 60/118 (50%), Gaps = 4/118 (3%) Query: 12 KLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVAD--VEVDGRRVELALWDTAGQE 69 K++++G GK+ ++ F + PT+ + + + +G+ ++L +WDTAGQE Sbjct: 7 KIILIGSSGVGKSSIVHQFLFNRKISNVSPTIGAAFASKQVIAKNGKTLKLNIWDTAGQE 66 Query: 70 DYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVPIIL-VGCKVDL 126 + + + Y +S L+ F + +S ++V WI ++ C IL V K+D+ Sbjct: 67 RFRSITKMYYTNSLGCLVVFDVTDRESFDDVYY-WINDLRINCHTTYYILVVANKIDI 123 >3C5C-A nrPDB Length = 187 Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 50/176 (28%), Positives = 81/176 (46%), Gaps = 22/176 (12%) Query: 12 KLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDTAGQEDY 71 L I+G GK+ L + F +F Y P + + Y ++ VD + V L + DTA D Sbjct: 23 NLAILGRRGAGKSALTVKFLTKRFISEYDPNLEDTYSSEETVDHQPVHLRVMDTA---DL 79 Query: 72 DRLRPLS-YPD-SNVVLICFSIDLPDSLENVQEKWIAEVLHFCQ---GVPIILVGCKVDL 126 D R Y + ++ L+ +S+D S ++ LH + +P +L+G K+D+ Sbjct: 80 DTPRNCERYLNWAHAFLVVYSVDSRQSFDSSSSYLELLALHAKETQRSIPALLLGNKLDM 139 Query: 127 RNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGY-GVREVFEAATR 181 Q RQ VT EG ++A + G ++E SA + V+ VF A R Sbjct: 140 -------AQYRQ-----VTKAEGVALAGRFGCL-FFEVSACLDFEHVQHVFHEAVR 182 >2AL7-A nrPDB Length = 186 Score = 43.1 bits (100), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 41/143 (28%), Positives = 63/143 (44%), Gaps = 23/143 (16%) Query: 6 GNSIRRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDT 65 G+ +L +VG GKT + V + GQF E +PTV N +V V + +WD Sbjct: 18 GSKEEMELTLVGLQYSGKTTFVNVIASGQFSEDMIPTVGFNM---RKVTKGNVTIKIWDI 74 Query: 66 AGQEDYDRLRPLSYPDSNVVLICFSIDLPD---------SLENVQEKWIAEVLHFCQGVP 116 GQ + + N I + ID D L N+ +K QG+P Sbjct: 75 GGQPRFRSMWERYCRGVNA--IVYMIDAADREKIEASRNELHNLLDK------PQLQGIP 126 Query: 117 IILVGCKVDLRN---DPQTIEQL 136 ++++G K DL N + Q IE++ Sbjct: 127 VLVLGNKRDLPNALDEKQLIEKM 149 >3D6T-B nrPDB Length = 171 Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 32/126 (25%), Positives = 58/126 (46%), Gaps = 6/126 (4%) Query: 12 KLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENY-VADVEV---DGRRVELAL--WDT 65 KL+IVG+ GKT LL K + ++ + + V D + D R+ +L L WD Sbjct: 2 KLMIVGNTGSGKTTLLQQLMKTKKSDLGMQSATVGIDVKDWPIQIRDKRKRDLVLNVWDF 61 Query: 66 AGQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVPIILVGCKVD 125 AG+E++ P + L + + + + + W+ + P+ILVG +D Sbjct: 62 AGREEFYSTHPHFMTQRALYLAVYDLSKGQAEVDAMKPWLFNIKARASSSPVILVGTHLD 121 Query: 126 LRNDPQ 131 + ++ Q Sbjct: 122 VSDEKQ 127 >3Q85-A nrPDB Length = 169 Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 47/175 (26%), Positives = 74/175 (42%), Gaps = 20/175 (11%) Query: 12 KLVIVGDGACGKTCLLIVFSKGQFPEVY-VPTVFENYVADVEVDGRRVELALWDTAGQED 70 K+++VG+ GK+ L F Q + + + Y + VD V L ++D Q D Sbjct: 4 KVMLVGESGVGKSTLAGTFGGLQGDHAHEMENSEDTYERRIMVDKEEVTLIVYDIWEQGD 63 Query: 71 YDR-LRPLSYPDSNVVLICFSIDLPDSLENVQEKWI---AEVLHFCQGVPIILVGCKVDL 126 L+ + LI FS+ S V E + A H +P+ILVG K DL Sbjct: 64 AGGWLQDHCLQTGDAFLIVFSVTDRRSFSKVPETLLRLRAGRPH--HDLPVILVGNKSDL 121 Query: 127 RNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATR 181 + V+ +EG+ +A + + + E SA + RE+FE A R Sbjct: 122 AR------------SREVSLEEGRHLAGTL-SCKHIETSAALHHNTRELFEGAVR 163 >2NZJ-A nrPDB Length = 175 Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 47/169 (27%), Positives = 74/169 (43%), Gaps = 16/169 (9%) Query: 12 KLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDTAGQEDY 71 ++V++GD GKT L +F+ Q +++ + Y + VDG L + DT E Sbjct: 6 RVVLLGDPGVGKTSLASLFAGKQERDLHEQLGEDVYERTLTVDGEDTTLVVVDTWEAEKL 65 Query: 72 DR--LRPLSYPDSNVVLICFSIDLPDSLENVQEKWI-AEVLHFCQGVPIILVGCKVDLRN 128 D+ + + +I +SI S E+ E I H VPIILVG K DL Sbjct: 66 DKSWSQESCLQGGSAYVIVYSIADRGSFESASELRIQLRRTHQADHVPIILVGNKADLAR 125 Query: 129 DPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFE 177 + V+ +EG++ A + + E SA + V E+FE Sbjct: 126 ------------CREVSVEEGRACA-VVFDCKFIETSATLQHNVAELFE 161 >5C1S-A nrPDB Length = 391 Score = 40.0 bits (92), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 37/157 (23%), Positives = 67/157 (42%), Gaps = 20/157 (12%) Query: 12 KLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDTAGQEDY 71 +L++VG GKT L F E + E V++D + +++ D AGQ+ + Sbjct: 64 RLLVVGSSGVGKTTLCDCFF-----ESHQSQGEETREKHVQIDNDFIRISISDIAGQQSF 118 Query: 72 DRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQ-GVPIILVGCKVDLRNDP 130 Y + +L+ + I S +++ W+ ++ +C II++G K D Sbjct: 119 YACDN-PYDGYDAILVMYDITELKSFTDLKTMWLPDIFLYCNIDTQIIIIGNKKD----- 172 Query: 131 QTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAK 167 QE + +T +E + A Q +YE S K Sbjct: 173 -------QEIDRIITRKEAEQFA-QDRLCQFYEISTK 201 Score = 36.2 bits (82), Expect = 0.011, Method: Compositional matrix adjust. Identities = 38/162 (23%), Positives = 70/162 (43%), Gaps = 22/162 (13%) Query: 9 IRRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPT--VFENYVAD-VEVDGRRVELALWDT 65 I+ ++++VGD GKT + F+ + PT F N + E++ + E+ + D Sbjct: 221 IKIRMLMVGDQNVGKTTFIRKFA------LQDPTGHDFMNAITTRFEMEKIKYEIIMIDW 274 Query: 66 AGQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVPIILVGCKVD 125 + P +LI + I +S +N+ K+ + + V ++VG K D Sbjct: 275 GFYNKLLQTNPAISRTIEAILIVYDITNEESFQNIHRKYYPLINNKFSDVAGVIVGYKTD 334 Query: 126 LRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAK 167 L E Q+ +T + ++AD +G Y E S+K Sbjct: 335 L------------EAQRKITMGDALTLADWLGYK-YVEMSSK 363 >4ILE-A nrPDB Length = 184 Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust. Identities = 37/125 (29%), Positives = 55/125 (44%), Gaps = 22/125 (17%) Query: 12 KLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDTAGQEDY 71 +L +VG GKT + V + GQF E +PTV N ++ V + LWD GQ Sbjct: 24 ELTLVGLQYSGKTTFVNVIASGQFNEDMIPTVGFNM---RKITKGNVTIKLWDIGGQP-- 78 Query: 72 DRLRPL-SYPDSNVVLICFSIDLPD---------SLENVQEKWIAEVLHFCQGVPIILVG 121 R R + V I + +D D L N+ +K QG+P++++G Sbjct: 79 -RFRSMWERYCRGVSAIVYMVDAADQEKIEASKNELHNLLDK------PQLQGIPVLVLG 131 Query: 122 CKVDL 126 K DL Sbjct: 132 NKRDL 136 >2CJW-A nrPDB Length = 192 Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust. Identities = 48/202 (23%), Positives = 84/202 (41%), Gaps = 27/202 (13%) Query: 12 KLVIVGDGACGKTCLLIVF-----SKGQFPEVYVPTVFENYVADVEVDGRR---VELALW 63 ++V++G+ GK+ L +F S EV +E + VDG + L +W Sbjct: 8 RVVLIGEQGVGKSTLANIFAGVHDSMDSDCEVLGEDTYERTLM---VDGESATIILLDMW 64 Query: 64 DTAGQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIA-EVLHFCQGVPIILVGC 122 + G+ ++ + D+ LI +SI S E E I + +PIILVG Sbjct: 65 ENKGENEWLHDHCMQVGDA--YLIVYSITDRASFEKASELRIQLRRARQTEDIPIILVGN 122 Query: 123 KVDLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRA 182 K DL + V+ EG++ A + + E SA + V+E+FE R Sbjct: 123 KSDLVR------------CREVSVSEGRACA-VVFDCKFIETSAAVQHNVKELFEGIVRQ 169 Query: 183 SLMGKSKTNGKAKKNTTEKKKK 204 + + ++ +K+K+ Sbjct: 170 VRLRRDSKEKNERRLAYQKRKE 191 >2G3Y-A nrPDB Length = 211 Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust. Identities = 50/190 (26%), Positives = 81/190 (42%), Gaps = 28/190 (14%) Query: 1 MSQQVGNSIRRKLVIVGDGACGKTCLLIVF-----SKGQFPEVYVPTVFENYVADVEVDG 55 +S + GN+ R +V++G+ GK+ L +F S EV +E + VDG Sbjct: 29 ISSESGNTYYR-VVLIGEQGVGKSTLANIFAGVHDSMDSDCEVLGEDTYERTLM---VDG 84 Query: 56 RR---VELALWDTAGQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIA-EVLHF 111 + L +W+ G+ ++ + D+ LI +SI S E E I Sbjct: 85 ESATIILLDMWENKGENEWLHDHCMQVGDA--YLIVYSITDRASFEKASELRIQLRRARQ 142 Query: 112 CQGVPIILVGCKVDLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYG 171 + +PIILVG K DL + V+ EG++ A + + E SA + Sbjct: 143 TEDIPIILVGNKSDLVR------------CREVSVSEGRACA-VVFDCKFIETSAAVQHN 189 Query: 172 VREVFEAATR 181 V+E+FE R Sbjct: 190 VKELFEGIVR 199 >4YLG-A nrPDB Length = 173 Score = 35.4 bits (80), Expect = 0.017, Method: Compositional matrix adjust. Identities = 27/85 (31%), Positives = 42/85 (49%), Gaps = 8/85 (9%) Query: 12 KLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDTAGQEDY 71 ++++VG A GKT +L G+ +PT+ N V VE + + +WD GQ Sbjct: 15 RILMVGLDAAGKTSILYKLKLGEIVTT-IPTIGFN-VETVEY--KNISFTVWDVGGQ--- 67 Query: 72 DRLRPL-SYPDSNVVLICFSIDLPD 95 D++RPL + N I F +D D Sbjct: 68 DKIRPLWRHYYQNTQAIIFVVDSND 92 >3LRP-A nrPDB Length = 181 Score = 35.4 bits (80), Expect = 0.017, Method: Compositional matrix adjust. Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 8/85 (9%) Query: 12 KLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDTAGQEDY 71 ++++VG A GKT +L G+ +PT+ N V VE R + +WD GQ Sbjct: 19 RILMVGLDAAGKTTILYKVKLGEVVTT-IPTIGFN-VETVEF--RNISFTVWDVGGQ--- 71 Query: 72 DRLRPL-SYPDSNVVLICFSIDLPD 95 D++RPL + SN + F +D D Sbjct: 72 DKIRPLWRHYYSNTDGLIFVVDSND 96 >2H16-A nrPDB Length = 183 Score = 35.0 bits (79), Expect = 0.024, Method: Compositional matrix adjust. Identities = 23/82 (28%), Positives = 38/82 (46%), Gaps = 4/82 (4%) Query: 6 GNSIRRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDT 65 G+ K++IVG GKT +L FS + PT+ N V ++ ++ R +WD Sbjct: 18 GSHQEHKVIIVGLDNAGKTTILYQFSMNEVVHTS-PTIGSN-VEEIVINNTR--FLMWDI 73 Query: 66 AGQEDYDRLRPLSYPDSNVVLI 87 GQE Y ++ V++ Sbjct: 74 GGQESLRSSWNTYYTNTEFVIV 95 >3DPU-A nrPDB Length = 535 Score = 33.5 bits (75), Expect = 0.061, Method: Compositional matrix adjust. Identities = 42/190 (22%), Positives = 69/190 (36%), Gaps = 34/190 (17%) Query: 12 KLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENY-----------VADVEVDGRRVE- 59 K+ ++GDG GKT LL K E + P + + + +E D E Sbjct: 43 KVHLIGDGMAGKTSLL----KQLIGETFDPKESQTHGLNVVTKQAPNIKGLENDDELKEC 98 Query: 60 -LALWDTAGQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVPII 118 WD GQE S+V ++ L ++ + W+ + + P+I Sbjct: 99 LFHFWDFGGQEIMHASHQFFMTRSSVYMLL----LDSRTDSNKHYWLRHIEKYGGKSPVI 154 Query: 119 LVGCKVDLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEA 178 +V K+D N IEQ + + P ++ S K G GV + ++ Sbjct: 155 VVMNKID-ENPSYNIEQKKINERFPAIENR------------FHRISCKNGDGVESIAKS 201 Query: 179 ATRASLMGKS 188 A L S Sbjct: 202 LKSAVLHPDS 211 >2YC4-C nrPDB Length = 208 Score = 32.0 bits (71), Expect = 0.18, Method: Compositional matrix adjust. Identities = 42/148 (28%), Positives = 68/148 (45%), Gaps = 15/148 (10%) Query: 5 VGNSIRRKLVIVGDGACGKTCLLIVF-SKG-QFPEVYVPTV-FENYVADVEVDGR--RVE 59 + ++R K+ +VG+ GK+ L+ +F SKG +F + Y T E VA V + VE Sbjct: 15 ITATLRCKVAVVGEATVGKSALISMFTSKGSKFLKDYAMTSGVEVVVAPVTIPDTTVSVE 74 Query: 60 LALWDTAGQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFC-----QG 114 L L DTAG + Y + ++ F + +S E+ + W E+L + Sbjct: 75 LFLLDTAGSDLYKEQISQYWNGVYYAILVFDVSSMESFESCK-AWF-ELLKSARPDRERP 132 Query: 115 VPIILVGCKVDLRNDPQTIEQLRQEGQQ 142 + +LV K DL P Q+R + Q Sbjct: 133 LRAVLVANKTDL---PPQRHQVRLDMAQ 157 >3Q72-A nrPDB Length = 166 Score = 31.2 bits (69), Expect = 0.35, Method: Compositional matrix adjust. Identities = 42/172 (24%), Positives = 67/172 (38%), Gaps = 17/172 (9%) Query: 12 KLVIVGDGACGKTCLLIVFSKGQ-FPEVYVPTVFENYVADVEVDGRRVELALWDTAGQED 70 K++++G GK+ L +F + PE Y + VDG L ++D Q+ Sbjct: 4 KVLLLGAPGVGKSALARIFGGVEDGPEA--EAAGHTYDRSIVVDGEEASLMVYDIWEQDG 61 Query: 71 YDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWI-AEVLHFCQGVPIILVGCKVDLRND 129 L + +I +S+ S E E + VPIILVG K DL Sbjct: 62 GRWLPGHCMAMGDAYVIVYSVTDKGSFEKASELRVQLRRARQTDDVPIILVGNKSDLVR- 120 Query: 130 PQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATR 181 + V+ EG++ A + + E SA + V+ +FE R Sbjct: 121 -----------SREVSVDEGRACA-VVFDCKFIETSAALHHNVQALFEGVVR 160 >3CB4-D nrPDB Length = 599 Score = 30.8 bits (68), Expect = 0.48, Method: Compositional matrix adjust. Identities = 35/133 (26%), Positives = 58/133 (43%), Gaps = 26/133 (19%) Query: 54 DGRRVELALWDTAGQEDYDRLRPLSYPDSNVVLIC-FSIDLPDSLENVQEKWIAEVLHFC 112 DG +L DT G D+ SY S + C ++ + D+ + V+ + +A Sbjct: 67 DGETYQLNFIDTPGHVDF------SYEVSRSLAACEGALLVVDAGQGVEAQTLANCYTAM 120 Query: 113 Q-GVPIILVGCKVDL-RNDPQTIEQLRQEGQQPVTSQEGQSVADQIG--ATGYYECSAKT 168 + + ++ V K+DL DP+ + + + D +G AT CSAKT Sbjct: 121 EMDLEVVPVLNKIDLPAADPERV---------------AEEIEDIVGIDATDAVRCSAKT 165 Query: 169 GYGVREVFEAATR 181 G GV++V E R Sbjct: 166 GVGVQDVLERLVR 178 >6HLU-A nrPDB Length = 974 Score = 30.4 bits (67), Expect = 0.54, Method: Composition-based stats. Identities = 41/186 (22%), Positives = 68/186 (36%), Gaps = 34/186 (18%) Query: 12 KLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENY-----------VADVEVDGRRVE- 59 K+ ++GDG GKT LL K E + P + + + +E D E Sbjct: 482 KVHLIGDGMAGKTSLL----KQLIGETFDPKESQTHGLNVVTKQAPNIKGLENDDELKEC 537 Query: 60 -LALWDTAGQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVPII 118 WD GQE S+V ++ L ++ + W+ + + P+I Sbjct: 538 LFHFWDFGGQEIMHASHQFFMTRSSVYMLL----LDSRTDSNKHYWLRHIEKYGGKSPVI 593 Query: 119 LVGCKVDLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEA 178 +V K+D N IEQ + + P ++ S K G GV + ++ Sbjct: 594 VVMNKID-ENPSYNIEQKKINERFPAIENR------------FHRISCKNGDGVESIAKS 640 Query: 179 ATRASL 184 A L Sbjct: 641 LKSAVL 646 >6DQW-A nrPDB Length = 585 Score = 30.0 bits (66), Expect = 0.73, Method: Compositional matrix adjust. Identities = 19/72 (26%), Positives = 34/72 (47%), Gaps = 13/72 (18%) Query: 38 VYVPTVFENYVADVEVDGRRVELALWDTAGQEDYDRLRPLSYPDSNVVLICFSIDLPDSL 97 +Y P + E++V +E + +W G E R P+S CF++ +PD + Sbjct: 78 LYKPELKESFVEMIERGWMSISSPVWANMGTE---RGLPIS---------CFNVHVPDKI 125 Query: 98 ENVQEKWIAEVL 109 E + K + EV+ Sbjct: 126 EGITHK-LGEVI 136 >5YMX-A nrPDB Length = 203 Score = 30.0 bits (66), Expect = 0.76, Method: Compositional matrix adjust. Identities = 47/199 (23%), Positives = 83/199 (41%), Gaps = 34/199 (17%) Query: 12 KLVIVGDGACGKTCLLIVF-------SKGQFPEVYVP---TVFENY--VADVEVDGRRVE 59 K+V G G CGKT L +KG+ + T+F ++ ++ E+ G + Sbjct: 14 KIVYYGPGLCGKTTNLQYIYNKTAAETKGKLISLSTETDRTLFFDFLPLSLGEIRGFKTR 73 Query: 60 LALWDTAGQEDYDRLRPLSYPDSNVVLICFSIDLP------DSLENVQEKWIAEVLHFCQ 113 L+ GQ YD R L + V+ + +SLEN++ +AE + Sbjct: 74 FHLYTVPGQVFYDASRKLILKGVDGVVFVADSQIERMEANMESLENLRIN-LAEQGYDLN 132 Query: 114 GVPIILVGCKVDLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVR 173 +P ++ K DL N T+E++R+ + +++ + Y+ A TG GV Sbjct: 133 KIPYVIQYNKRDLPN-AVTVEEMRK-------ALNHRNIPE-------YQAVAPTGVGVF 177 Query: 174 EVFEAATRASLMGKSKTNG 192 + +A + L K G Sbjct: 178 DTLKAVAKLVLTELKKGGG 196 >3J4J-A nrPDB Length = 569 Score = 29.6 bits (65), Expect = 0.89, Method: Compositional matrix adjust. Identities = 43/170 (25%), Positives = 73/170 (42%), Gaps = 22/170 (12%) Query: 13 LVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDTAGQEDYD 72 +VI+G GKT LL K + E + + +V EV + + DT G E + Sbjct: 76 VVIMGHVDHGKTTLLDYLRKSRIAEKEAGGITQ-HVGAFEVKTPQGTVVFIDTPGHEAFT 134 Query: 73 RLRPLSYPDSNVVLICFSID---LPDSLENVQEKWIAEVLHFCQGVPIILVGCKVDL-RN 128 +R +++ +I + D +P + E + G +I K+DL + Sbjct: 135 TIRQRGAKVADIAVIVIAADDGIMPQTEEAIAHAK-------AAGAKLIFAINKIDLPQA 187 Query: 129 DPQTIE-QLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFE 177 DP+ ++ QL + G P G ++ I SAKTG GV+++ E Sbjct: 188 DPEKVKRQLMERGFVP-EEYGGDAIVIPI--------SAKTGQGVQDLLE 228 >4KJZ-A nrPDB Length = 473 Score = 29.6 bits (65), Expect = 1.0, Method: Compositional matrix adjust. Identities = 43/170 (25%), Positives = 73/170 (42%), Gaps = 22/170 (12%) Query: 13 LVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDTAGQEDYD 72 +VI+G GKT LL K + E + + +V EV + + DT G E + Sbjct: 75 VVIMGHVDHGKTTLLDYLRKSRIAEKEAGGITQ-HVGAFEVKTPQGTVVFIDTPGHEAFT 133 Query: 73 RLRPLSYPDSNVVLICFSID---LPDSLENVQEKWIAEVLHFCQGVPIILVGCKVDL-RN 128 +R +++ +I + D +P + E + G +I K+DL + Sbjct: 134 TIRQRGAKVADIAVIVIAADDGIMPQTEEAIAHAK-------AAGAKLIFAINKIDLPQA 186 Query: 129 DPQTIE-QLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFE 177 DP+ ++ QL + G P G ++ I SAKTG GV+++ E Sbjct: 187 DPEKVKRQLMERGFVP-EEYGGDAIVIPI--------SAKTGQGVQDLLE 227 >4B44-A nrPDB Length = 363 Score = 29.6 bits (65), Expect = 1.1, Method: Compositional matrix adjust. Identities = 43/170 (25%), Positives = 73/170 (42%), Gaps = 22/170 (12%) Query: 13 LVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDTAGQEDYD 72 +VI+G GKT LL K + E + + +V EV + + DT G E + Sbjct: 76 VVIMGHVDHGKTTLLDYLRKSRIAEKEAGGITQ-HVGAFEVKTPQGTVVFIDTPGHEAFT 134 Query: 73 RLRPLSYPDSNVVLICFSID---LPDSLENVQEKWIAEVLHFCQGVPIILVGCKVDL-RN 128 +R +++ +I + D +P + E + G +I K+DL + Sbjct: 135 TIRQRGAKVADIAVIVIAADDGIMPQTEEAIAHAK-------AAGAKLIFAINKIDLPQA 187 Query: 129 DPQTIE-QLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFE 177 DP+ ++ QL + G P G ++ I SAKTG GV+++ E Sbjct: 188 DPEKVKRQLMERGFVP-EEYGGDAIVIPI--------SAKTGQGVQDLLE 228 >4WNR-A nrPDB Length = 349 Score = 28.9 bits (63), Expect = 1.7, Method: Compositional matrix adjust. Identities = 25/119 (21%), Positives = 48/119 (40%), Gaps = 13/119 (10%) Query: 12 KLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDG-----RRVELALWDTA 66 K+++VGDG GKT LL K E + + +++ G + +++ WD Sbjct: 43 KVLLVGDGEAGKTSLL----KRLLGEGFDGNEHQTQGINIKKWGFKDKDKEIKVNFWDFG 98 Query: 67 GQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVPIILVGCKVD 125 GQE ++ ++ L + E W+ + F P+++ K+D Sbjct: 99 GQEIMHATHQFFLSKRSLYILV----LDSRRDEKAEYWLKHIRSFGGDSPVLVALNKID 153 >5XW2-A nrPDB Length = 419 Score = 28.1 bits (61), Expect = 2.9, Method: Compositional matrix adjust. Identities = 16/79 (20%), Positives = 38/79 (48%), Gaps = 10/79 (12%) Query: 66 AGQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVPIILVGCKVD 125 A ++ +D + L+YP V ++ + +P + ++ E W+ E++H V Sbjct: 137 ADRDTFDLMTALAYP-LPVTVVAELLSIPSADRHLFEGWMTEIVHSL---------GDVS 186 Query: 126 LRNDPQTIEQLRQEGQQPV 144 + + P+ E++ + G P+ Sbjct: 187 MEDAPEDQERIFEAGMAPM 205 >2DYK-A nrPDB Length = 161 Score = 28.1 bits (61), Expect = 2.9, Method: Compositional matrix adjust. Identities = 44/133 (33%), Positives = 58/133 (43%), Gaps = 24/133 (18%) Query: 11 RKLVIVGDGACGKTCLLIVFSKGQFPEVY-VPTVFENYVADVEVDGRRVELALWDTAG-- 67 K+VIVG GK+ L K + V VP V + V V+ R L DT G Sbjct: 2 HKVVIVGRPNVGKSSLFNRLLKKRSAVVADVPGVTRDLKEGV-VETDRGRFLLVDTGGLW 60 Query: 68 ---------QEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVPII 118 QE DR + D+ VVL F++D L + +AE L +G P+I Sbjct: 61 SGDKWEKKIQEKVDR----ALEDAEVVL--FAVDGRAELTQADYE-VAEYLR-RKGKPVI 112 Query: 119 LVGCKVDLRNDPQ 131 LV KVD DP+ Sbjct: 113 LVATKVD---DPK 122 >5HXT-A nrPDB Length = 233 Score = 27.3 bits (59), Expect = 5.1, Method: Compositional matrix adjust. Identities = 14/55 (25%), Positives = 26/55 (47%), Gaps = 3/55 (5%) Query: 114 GVPIILVGCKVDLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKT 168 GV + ++GCK DL P T+++ ++ +G + + GYY+ T Sbjct: 90 GVRVSIIGCKTDL---PMTLQKCIALTEETTKGNKGLHLVIALNYGGYYDILQAT 141 >2QAG-A nrPDB Length = 361 Score = 26.9 bits (58), Expect = 6.9, Method: Compositional matrix adjust. Identities = 14/49 (28%), Positives = 26/49 (53%), Gaps = 1/49 (2%) Query: 13 LVIVGDGACGKTCLL-IVFSKGQFPEVYVPTVFENYVADVEVDGRRVEL 60 L++VG+ GK+ L+ +F +PE +P E V+++ VE+ Sbjct: 40 LMVVGESGLGKSTLINSLFLTDLYPERVIPGAAEKIERTVQIEASTVEI 88 >5X5J-A nrPDB Length = 137 Score = 26.6 bits (57), Expect = 7.4, Method: Compositional matrix adjust. Identities = 12/36 (33%), Positives = 21/36 (58%) Query: 109 LHFCQGVPIILVGCKVDLRNDPQTIEQLRQEGQQPV 144 LH Q + +IL+ K+ N + + ++RQ+ Q PV Sbjct: 51 LHASQPIDLILLDIKLPELNGWEVLNKIRQKAQTPV 86 >3WKX-A nrPDB Length = 669 Score = 26.6 bits (57), Expect = 7.8, Method: Compositional matrix adjust. Identities = 16/67 (23%), Positives = 28/67 (41%), Gaps = 11/67 (16%) Query: 2 SQQVGNSIRRKLVIVGDGACGKTCLLIVFS-----------KGQFPEVYVPTVFENYVAD 50 S VG S + D G+TC + S KG++ +V +F +A Sbjct: 317 STHVGESFTYDYDLPNDTMYGETCASVAMSMFAQQMLDLEPKGEYADVLEKELFNGSIAG 376 Query: 51 VEVDGRR 57 + +DG++ Sbjct: 377 ISLDGKQ 383 >3FTQ-A nrPDB Length = 274 Score = 26.6 bits (57), Expect = 8.6, Method: Compositional matrix adjust. Identities = 14/49 (28%), Positives = 26/49 (53%), Gaps = 1/49 (2%) Query: 13 LVIVGDGACGKTCLL-IVFSKGQFPEVYVPTVFENYVADVEVDGRRVEL 60 L++VG+ GK+ L+ +F +PE +P E V+++ VE+ Sbjct: 8 LMVVGESGLGKSTLINSLFLTDLYPERIIPGAAEKIERTVQIEASTVEI 56 >2YWH-A nrPDB Length = 600 Score = 26.2 bits (56), Expect = 9.4, Method: Compositional matrix adjust. Identities = 30/127 (23%), Positives = 59/127 (46%), Gaps = 20/127 (15%) Query: 54 DGRRVELALWDTAGQEDYDRLRPLSYPDSNVVLICF-SIDLPDSLENVQEKWIAEVLHFC 112 DG +L L DT G D+ SY S + C ++ L D+ + ++ + +A Sbjct: 69 DGNTYKLHLIDTPGHVDF------SYEVSRALAACEGALLLIDASQGIEAQTVANFWKAV 122 Query: 113 -QGVPIILVGCKVDLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYG 171 Q + II V K+DL + +++++++ ++ + +++ SAK G G Sbjct: 123 EQDLVIIPVINKIDLPS--ADVDRVKKQIEEVLGLDPEEAIL----------ASAKEGIG 170 Query: 172 VREVFEA 178 + E+ EA Sbjct: 171 IEEILEA 177 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 3A58-B nrPDB 274 1e-74 5C2K-A nrPDB 271 2e-73 5ZHX-e nrPDB 265 7e-72 5JCP-B nrPDB 259 9e-70 2FV8-A nrPDB 254 3e-68 5ZVP-A nrPDB 250 2e-67 3TH5-A nrPDB 249 7e-67 3RYT-C nrPDB 247 3e-66 2J1L-A nrPDB 243 4e-65 2W2X-A nrPDB 242 8e-65 1RYH-A nrPDB 242 8e-65 2WKQ-A nrPDB 242 9e-65 5VCU-A nrPDB 241 2e-64 2J0V-A nrPDB 240 3e-64 2NTY-C nrPDB 239 6e-64 3BWD-D nrPDB 239 7e-64 2WBL-C nrPDB 238 2e-63 3VHL-B nrPDB 236 5e-63 2ATX-A nrPDB 234 2e-62 4U5X-A nrPDB 232 7e-62 4QXA-A nrPDB 222 6e-59 4MIT-A nrPDB 222 9e-59 2Q3H-A nrPDB 222 1e-58 5SZH-B nrPDB 215 1e-56 2RHD-A nrPDB 213 4e-56 1GWN-A nrPDB 212 7e-56 1WMS-A nrPDB 212 1e-55 1M7B-A nrPDB 211 2e-55 3L0I-B nrPDB 210 3e-55 2OCB-A nrPDB 208 1e-54 5SZI-A nrPDB 206 4e-54 4LHX-A nrPDB 205 9e-54 2WWX-A nrPDB 205 1e-53 3CUE-F nrPDB 205 1e-53 6IF2-B nrPDB 205 2e-53 4M8N-E nrPDB 204 3e-53 5SZJ-A nrPDB 203 5e-53 5FBL-B nrPDB 203 6e-53 5CM8-B nrPDB 203 6e-53 5LPN-A nrPDB 202 8e-53 4G01-B nrPDB 202 9e-53 1Z0A-A nrPDB 202 9e-53 1YZN-A nrPDB 202 1e-52 2A5J-A nrPDB 202 1e-52 3CPH-A nrPDB 202 1e-52 4DXA-A nrPDB 201 2e-52 5LEF-A nrPDB 201 2e-52 2GF9-A nrPDB 201 2e-52 5LDD-C nrPDB 200 2e-52 1Z0F-A nrPDB 200 3e-52 1TU4-A nrPDB 200 4e-52 2OCY-C nrPDB 200 4e-52 1ZBD-A nrPDB 199 6e-52 2F9L-A nrPDB 199 8e-52 6O62-A nrPDB 199 9e-52 2HEI-A nrPDB 197 2e-51 3DZ8-A nrPDB 197 3e-51 2O52-A nrPDB 197 3e-51 4RKF-A nrPDB 197 4e-51 4KYI-B nrPDB 197 4e-51 4KLZ-A nrPDB 197 4e-51 2REX-B nrPDB 197 4e-51 4RKE-A nrPDB 196 5e-51 3RAB-A nrPDB 195 8e-51 2HUP-A nrPDB 195 9e-51 4UJ4-A nrPDB 195 1e-50 2BMD-A nrPDB 195 1e-50 6IYB-A nrPDB 195 1e-50 2G6B-A nrPDB 193 3e-50 2FG5-A nrPDB 193 4e-50 5XR6-A nrPDB 193 5e-50 3CPJ-B nrPDB 192 7e-50 1X3S-A nrPDB 192 7e-50 1EK0-A nrPDB 192 1e-49 4PHF-A nrPDB 191 2e-49 5UB8-A nrPDB 191 2e-49 5YOZ-A nrPDB 189 6e-49 2IL1-A nrPDB 188 1e-48 2F7S-A nrPDB 188 1e-48 3REG-A nrPDB 188 1e-48 2FFQ-A nrPDB 188 2e-48 2EW1-A nrPDB 187 3e-48 1YVD-A nrPDB 187 4e-48 1D5C-A nrPDB 186 5e-48 2ATV-A nrPDB 185 8e-48 6HUF-A nrPDB 185 9e-48 3BFK-A nrPDB 185 2e-47 2KE5-A nrPDB 184 2e-47 2GIL-A nrPDB 184 2e-47 3BC1-A nrPDB 184 2e-47 1ZC4-A nrPDB 184 3e-47 3RWM-B nrPDB 184 3e-47 2IEZ-A nrPDB 184 3e-47 2IEY-A nrPDB 183 4e-47 1YZU-A nrPDB 183 5e-47 1Z06-A nrPDB 183 7e-47 2G77-B nrPDB 182 7e-47 2ERX-A nrPDB 182 8e-47 4KU4-A nrPDB 182 1e-46 3TSO-A nrPDB 182 1e-46 4WA7-A nrPDB 181 2e-46 2P5S-A nrPDB 181 2e-46 3CON-A nrPDB 178 1e-45 5WDQ-A nrPDB 178 2e-45 5HZH-A nrPDB 178 2e-45 1Z22-A nrPDB 177 3e-45 5UHV-A nrPDB 177 4e-45 2CJW-A nrPDB 175 1e-44 2GF0-A nrPDB 175 1e-44 5UWI-A nrPDB 175 2e-44 2N1B-A nrPDB 175 2e-44 5CLL-A nrPDB 174 2e-44 5WDR-A nrPDB 174 2e-44 4FMC-F nrPDB 173 4e-44 2FN4-A nrPDB 171 2e-43 2ERY-A nrPDB 170 4e-43 2G3Y-A nrPDB 170 6e-43 3WYF-A nrPDB 167 2e-42 5XOJ-A nrPDB 166 5e-42 3T5G-A nrPDB 166 6e-42 3PIR-A nrPDB 165 9e-42 3RAP-R nrPDB 161 1e-40 3CBQ-A nrPDB 161 2e-40 4CZ2-A nrPDB 158 1e-39 3OES-A nrPDB 157 3e-39 6FF8-A nrPDB 156 4e-39 2NZJ-A nrPDB 153 6e-38 3Q85-A nrPDB 151 2e-37 5XC3-A nrPDB 146 7e-36 3E5H-A nrPDB 145 2e-35 4DJT-A nrPDB 143 6e-35 3CLV-A nrPDB 142 1e-34 5C1S-A nrPDB 131 2e-31 3C5C-A nrPDB 128 2e-30 2AL7-A nrPDB 116 5e-27 4ILE-A nrPDB 109 8e-25 3D6T-B nrPDB 106 5e-24 Sequences not found previously or not previously below threshold: 3Q72-A nrPDB 145 1e-35 3IHW-A nrPDB 91 2e-19 2YC4-C nrPDB 86 1e-17 2IWR-A nrPDB 78 2e-15 2H16-A nrPDB 78 3e-15 6HLU-A nrPDB 77 6e-15 3DPU-A nrPDB 76 1e-14 4WNR-A nrPDB 76 1e-14 1YZG-A nrPDB 75 2e-14 3LVQ-E nrPDB 73 1e-13 2A5F-A nrPDB 70 5e-13 4YLG-A nrPDB 70 6e-13 3LRP-A nrPDB 70 6e-13 6BBQ-A nrPDB 68 2e-12 5NZV-F nrPDB 68 3e-12 1Z6X-A nrPDB 68 3e-12 3O47-A nrPDB 66 7e-12 6FAE-B nrPDB 66 1e-11 6DFF-C nrPDB 65 2e-11 3AQ4-A nrPDB 65 2e-11 4ZI3-A nrPDB 64 4e-11 5UF8-A nrPDB 64 5e-11 2B6H-A nrPDB 63 6e-11 1MOZ-A nrPDB 63 8e-11 5EE5-B nrPDB 63 8e-11 1J2J-A nrPDB 63 1e-10 1KSG-A nrPDB 62 2e-10 4C0K-A nrPDB 61 5e-10 3BH6-A nrPDB 60 6e-10 5DE3-A nrPDB 58 3e-09 2H57-A nrPDB 58 3e-09 4V0N-A nrPDB 57 4e-09 4ARZ-A nrPDB 56 1e-08 2LKD-A nrPDB 55 2e-08 6CES-A nrPDB 54 5e-08 2GAO-A nrPDB 53 1e-07 2YWH-A nrPDB 52 1e-07 2GJ9-A nrPDB 51 3e-07 6GNI-B nrPDB 50 5e-07 1M2O-B nrPDB 50 5e-07 3GEH-A nrPDB 50 7e-07 1F6B-A nrPDB 50 9e-07 3J8G-X nrPDB 49 2e-06 2X77-A nrPDB 48 4e-06 2DYK-A nrPDB 47 7e-06 3T1O-A nrPDB 46 8e-06 5YMX-A nrPDB 46 9e-06 1XZP-A nrPDB 46 9e-06 4BAS-A nrPDB 46 1e-05 1WF3-A nrPDB 45 2e-05 5IMR-C nrPDB 44 3e-05 5J8B-z nrPDB 44 3e-05 5DN8-A nrPDB 44 4e-05 5DI3-B nrPDB 44 5e-05 6GB2-BC nrPDB 44 6e-05 4M9Q-A nrPDB 44 6e-05 2QAG-A nrPDB 43 6e-05 3FTQ-A nrPDB 43 7e-05 3CB4-D nrPDB 43 7e-05 5KU1-A nrPDB 43 9e-05 5LAD-A nrPDB 43 1e-04 3EC1-A nrPDB 43 1e-04 5KSO-A nrPDB 43 1e-04 1MKY-A nrPDB 43 1e-04 6D4G-A nrPDB 42 2e-04 3GEE-A nrPDB 42 2e-04 3T5D-A nrPDB 42 2e-04 6GDG-D nrPDB 42 2e-04 6IAE-A nrPDB 41 3e-04 4KJZ-A nrPDB 40 6e-04 4B44-A nrPDB 40 7e-04 3J4J-A nrPDB 39 0.001 5ZZM-A nrPDB 39 0.001 3IEU-A nrPDB 39 0.002 6F1T-i nrPDB 39 0.002 6F1Y-j nrPDB 38 0.003 3LLU-A nrPDB 38 0.003 3C5H-A nrPDB 38 0.003 3IZY-P nrPDB 38 0.003 3R9W-A nrPDB 38 0.004 2QAG-C nrPDB 38 0.004 5CYO-A nrPDB 38 0.004 2E87-A nrPDB 37 0.005 5KUT-A nrPDB 37 0.006 4DCU-A nrPDB 37 0.007 2Q3F-A nrPDB 36 0.008 6CES-C nrPDB 36 0.009 4V7F-o nrPDB 36 0.010 3H2Y-A nrPDB 36 0.010 4YMS-J nrPDB 36 0.010 2CXX-A nrPDB 36 0.011 1HEY-A nrPDB 36 0.015 3PR1-A nrPDB 35 0.020 5NON-A nrPDB 35 0.024 2VNE-A nrPDB 35 0.024 5IRR-A nrPDB 34 0.030 5KH0-A nrPDB 34 0.030 5YT0-A nrPDB 34 0.031 4TN1-B nrPDB 34 0.033 3JB9-B nrPDB 34 0.039 1SHZ-A nrPDB 34 0.039 6G79-A nrPDB 34 0.043 1ZCB-A nrPDB 34 0.044 5FG3-A nrPDB 34 0.048 4NCL-A nrPDB 34 0.049 4N3G-A nrPDB 34 0.051 1PUJ-A nrPDB 34 0.059 5M04-A nrPDB 33 0.097 2GTP-A nrPDB 33 0.11 1ZO1-I nrPDB 33 0.11 3JCN-b nrPDB 33 0.12 4CSU-9 nrPDB 33 0.13 5OCH-A nrPDB 33 0.14 6HZK-A nrPDB 32 0.16 2QTH-A nrPDB 32 0.20 3V00-C nrPDB 32 0.21 5B3F-A nrPDB 32 0.22 3K53-A nrPDB 32 0.22 1WDT-A nrPDB 32 0.22 2YYZ-A nrPDB 31 0.27 1YE8-A nrPDB 31 0.32 4U00-A nrPDB 31 0.32 2IYT-A nrPDB 31 0.35 5C78-A nrPDB 31 0.38 4Z54-A nrPDB 31 0.38 1LNZ-A nrPDB 31 0.38 4TLD-A nrPDB 31 0.41 4MKI-B nrPDB 31 0.48 3S1A-A nrPDB 31 0.48 2GZA-A nrPDB 31 0.52 5X4B-A nrPDB 31 0.54 4WQY-BZ nrPDB 30 0.61 2IW3-A nrPDB 30 0.63 4KV9-A nrPDB 30 0.65 4MYH-A nrPDB 30 0.66 1ZCA-A nrPDB 30 0.68 4KXX-A nrPDB 30 0.70 1WXQ-A nrPDB 30 0.72 4V89-AW nrPDB 30 0.73 1ZE1-A nrPDB 30 0.81 5JSZ-B nrPDB 30 0.85 5VHD-D nrPDB 30 0.88 5IDV-A nrPDB 30 0.91 1R6B-X nrPDB 30 0.93 5AR1-A nrPDB 29 0.98 3B5X-A nrPDB 29 1.0 5MKK-A nrPDB 29 1.1 4RY2-A nrPDB 29 1.2 2P8Y-T nrPDB 29 1.2 5OFO-C nrPDB 29 1.2 3FVQ-A nrPDB 29 1.3 4CIU-A nrPDB 29 1.3 3BE4-A nrPDB 29 1.3 1QVR-A nrPDB 29 1.3 6FEC-S nrPDB 29 1.3 6O81-S nrPDB 29 1.3 6I3O-A nrPDB 29 1.3 5MRE-WW nrPDB 29 1.3 2NQL-A nrPDB 29 1.3 5H7J-A nrPDB 29 1.4 1JBK-A nrPDB 29 1.4 4YPL-A nrPDB 29 1.5 4RI0-A nrPDB 29 1.5 3LLM-A nrPDB 29 1.5 6QUZ-B nrPDB 29 1.5 2YV5-A nrPDB 29 1.5 5GM6-Y nrPDB 29 1.5 5ZME-A nrPDB 29 1.6 6ED3-A nrPDB 29 1.6 6G2G-A nrPDB 29 1.7 4N1A-A nrPDB 29 1.7 5H7K-A nrPDB 29 1.8 4YPN-A nrPDB 29 1.8 5D4W-A nrPDB 29 1.8 3D0O-A nrPDB 29 1.8 4HSE-A nrPDB 29 1.9 3GD7-A nrPDB 29 1.9 2QU8-A nrPDB 29 1.9 1YR7-A nrPDB 29 2.1 3N5F-A nrPDB 29 2.1 6HA8-V nrPDB 28 2.1 1IY1-A nrPDB 28 2.2 4Q7L-A nrPDB 28 2.2 1U0L-A nrPDB 28 2.2 6H7G-A nrPDB 28 2.2 6OIK-A nrPDB 28 2.2 6D00-1 nrPDB 28 2.2 2ZBL-A nrPDB 28 2.2 5CA8-A nrPDB 28 2.3 3PV0-A nrPDB 28 2.3 3J3U-A nrPDB 28 2.3 2PJZ-A nrPDB 28 2.4 4AC9-A nrPDB 28 2.4 3PXG-A nrPDB 28 2.4 2KHQ-A nrPDB 28 2.4 3PXI-A nrPDB 28 2.5 5NIK-J nrPDB 28 2.5 2DHR-A nrPDB 28 2.5 1Z6G-A nrPDB 28 2.5 4XGC-D nrPDB 28 2.6 4HZI-A nrPDB 28 2.7 5LJA-A nrPDB 28 2.7 4QJ3-A nrPDB 28 2.7 2BCJ-Q nrPDB 28 2.8 2P4Q-A nrPDB 28 2.9 2OCP-A nrPDB 28 2.9 2QAG-B nrPDB 28 2.9 3VX4-A nrPDB 28 2.9 2RGK-A nrPDB 28 2.9 2BDT-A nrPDB 28 3.0 5GKO-A nrPDB 28 3.1 2IT1-A nrPDB 28 3.1 6QUZ-A nrPDB 28 3.2 5LKM-A nrPDB 28 3.2 6FA9-A nrPDB 28 3.2 5DO7-A nrPDB 28 3.5 1S0U-A nrPDB 28 3.5 5D0U-A nrPDB 28 3.5 2P65-A nrPDB 28 3.6 6OIJ-A nrPDB 28 3.6 4O0M-A nrPDB 28 3.8 1LZ5-A nrPDB 28 3.9 3DEF-A nrPDB 28 3.9 6D9H-A nrPDB 28 4.1 3P1J-A nrPDB 28 4.1 4Q7K-A nrPDB 28 4.3 5I8Q-A nrPDB 28 4.4 4QIW-C nrPDB 28 4.4 5JWO-A nrPDB 28 4.6 4XRP-A nrPDB 28 4.6 5ZLU-EE nrPDB 28 4.7 6FT6-s nrPDB 27 4.8 1P9P-A nrPDB 27 4.8 3Q06-A nrPDB 27 4.8 5JZV-A nrPDB 27 5.0 5EE0-A nrPDB 27 5.1 5EUM-A nrPDB 27 5.2 1T9H-A nrPDB 27 5.5 2P5T-B nrPDB 27 5.6 6EM8-A nrPDB 27 5.7 6EMW-E nrPDB 27 5.8 4F4J-A nrPDB 27 6.0 1EZ4-A nrPDB 27 6.0 4YDS-A nrPDB 27 6.1 4BQQ-A nrPDB 27 6.6 3EPJ-A nrPDB 27 7.1 2XTP-A nrPDB 27 7.3 2ODE-A nrPDB 27 7.5 3KAO-A nrPDB 27 7.9 2YK0-A nrPDB 26 9.3 2E21-A nrPDB 26 9.9 >3A58-B nrPDB Length = 188 Score = 274 bits (702), Expect = 1e-74, Method: Composition-based stats. Identities = 187/188 (99%), Positives = 187/188 (99%) Query: 1 MSQQVGNSIRRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVEL 60 MSQQVGNSIRRKLVIVGDGACGKTCLLIV SKGQFPEVYVPTVFENYVADVEVDGRRVEL Sbjct: 1 MSQQVGNSIRRKLVIVGDGACGKTCLLIVNSKGQFPEVYVPTVFENYVADVEVDGRRVEL 60 Query: 61 ALWDTAGQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVPIILV 120 ALWDTAGQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVPIILV Sbjct: 61 ALWDTAGQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVPIILV 120 Query: 121 GCKVDLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAAT 180 GCKVDLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAAT Sbjct: 121 GCKVDLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAAT 180 Query: 181 RASLMGKS 188 RASLMGKS Sbjct: 181 RASLMGKS 188 >5C2K-A nrPDB Length = 415 Score = 271 bits (693), Expect = 2e-73, Method: Composition-based stats. Identities = 138/207 (66%), Positives = 160/207 (77%), Gaps = 11/207 (5%) Query: 3 QQVGNSIRRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELAL 62 +IR+KLVIVGDGACGKTCLLIVFSK QFPEVYVPTVFENYVAD+EVDG++VELAL Sbjct: 5 SSGMAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELAL 64 Query: 63 WDTAGQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVPIILVGC 122 WDTAGQEDYDRLRPLSYPD++V+L+CFSID PDSLEN+ EKW EV HFC VPIILVG Sbjct: 65 WDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGN 124 Query: 123 KVDLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRA 182 K DLRND T +L + Q+PV +EG+ +A++IGA GY ECSAKT GVREVFE ATRA Sbjct: 125 KKDLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRA 184 Query: 183 SLMGKSKTNGKAKKNTTEKKKKKCVLL 209 +L + KKK C++L Sbjct: 185 ALQARRG-----------KKKSGCLVL 200 >5ZHX-e nrPDB Length = 198 Score = 265 bits (679), Expect = 7e-72, Method: Composition-based stats. Identities = 137/204 (67%), Positives = 159/204 (77%), Gaps = 11/204 (5%) Query: 5 VGNSIRRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWD 64 +IR+KLVIVGDGACGKTCLLIVFSK QFPEVYVPTVFENYVAD+EVDG++VELALWD Sbjct: 5 SMAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWD 64 Query: 65 TAGQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVPIILVGCKV 124 TAGQEDYDRLRPLSYPD++V+L+CFSID PDSLEN+ EKW EV HFC VPIILVG K Sbjct: 65 TAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKK 124 Query: 125 DLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRASL 184 DLRND T +L + Q+PV +EG+ +A++IGA GY ECSAKT GVREVFE ATRA+L Sbjct: 125 DLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAAL 184 Query: 185 MGKSKTNGKAKKNTTEKKKKKCVL 208 + KKK C++ Sbjct: 185 QARRG-----------KKKSGCLV 197 >5JCP-B nrPDB Length = 419 Score = 259 bits (661), Expect = 9e-70, Method: Composition-based stats. Identities = 132/179 (73%), Positives = 151/179 (84%) Query: 8 SIRRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDTAG 67 +IR+KLVIVGDGACGKTCLLIV SK QFPEVYVPTVFENYVAD+EVDG++VELALWDTAG Sbjct: 241 AIRKKLVIVGDGACGKTCLLIVNSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAG 300 Query: 68 QEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVPIILVGCKVDLR 127 QEDYDRLRPLSYPD++V+L+CFSID PDSLEN+ EKW EV HFC VPIILVG K DLR Sbjct: 301 QEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLR 360 Query: 128 NDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRASLMG 186 ND T +L + Q+PV +EG+ +A++IGA GY ECSAKT GVREVFE ATRA+L Sbjct: 361 NDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQA 419 >2FV8-A nrPDB Length = 207 Score = 254 bits (648), Expect = 3e-68, Method: Composition-based stats. Identities = 124/185 (67%), Positives = 151/185 (81%) Query: 7 NSIRRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDTA 66 + IR+KLV+VGDGACGKTCLLIVFSK +FPEVYVPTVFENYVAD+EVDG++VELALWDTA Sbjct: 22 SMIRKKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTA 81 Query: 67 GQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVPIILVGCKVDL 126 GQEDYDRLRPLSYPD++V+L+CFS+D PDSLEN+ EKW+ EV HFC VPIILV K DL Sbjct: 82 GQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPNVPIILVANKKDL 141 Query: 127 RNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRASLMG 186 R+D +L + Q+PV + +G+++A +I A Y ECSAKT GVREVFE ATRA+L Sbjct: 142 RSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAALQK 201 Query: 187 KSKTN 191 + + Sbjct: 202 RYGSQ 206 >5ZVP-A nrPDB Length = 181 Score = 250 bits (640), Expect = 2e-67, Method: Composition-based stats. Identities = 141/179 (78%), Positives = 160/179 (89%) Query: 8 SIRRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDTAG 67 IRRKLVIVGDGACGKTCLLIV SKG FPEVYVPTVFENYVADVEVDG+ VELALWDTAG Sbjct: 3 EIRRKLVIVGDGACGKTCLLIVNSKGTFPEVYVPTVFENYVADVEVDGKHVELALWDTAG 62 Query: 68 QEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVPIILVGCKVDLR 127 QEDYDRLRPLSYPDS+V+LICF+ID PDSL+NVQEKWI+EVLHFCQG+PIILVGCK DLR Sbjct: 63 QEDYDRLRPLSYPDSHVILICFAIDSPDSLDNVQEKWISEVLHFCQGLPIILVGCKKDLR 122 Query: 128 NDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRASLMG 186 +DP+TIE+L + Q+PVT ++G+ V +IGA Y ECSA+T GVREVFEAATRA+L+ Sbjct: 123 HDPKTIEELHKTSQKPVTPEQGEEVRKKIGAYKYLECSARTNEGVREVFEAATRAALLT 181 >3TH5-A nrPDB Length = 204 Score = 249 bits (636), Expect = 7e-67, Method: Composition-based stats. Identities = 101/173 (58%), Positives = 126/173 (72%) Query: 12 KLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDTAGQEDY 71 K V+VGDGA GKTCLLI ++ FP Y+PTVF+NY A+V VDG+ V L LWDTAGQEDY Sbjct: 32 KCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAGQEDY 91 Query: 72 DRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVPIILVGCKVDLRNDPQ 131 DRLRPLSYP ++V LICFS+ P S ENV+ KW EV H C PIILVG K+DLR+D Sbjct: 92 DRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCPNTPIILVGTKLDLRDDKD 151 Query: 132 TIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRASL 184 TIE+L+++ P+T +G ++A +IGA Y ECSA T G++ VF+ A RA L Sbjct: 152 TIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQRGLKTVFDEAIRAVL 204 >3RYT-C nrPDB Length = 180 Score = 247 bits (630), Expect = 3e-66, Method: Composition-based stats. Identities = 100/178 (56%), Positives = 126/178 (70%) Query: 7 NSIRRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDTA 66 + K V+VGDGA GKTCLLI ++ FP Y+PTVF+NY A+V VDG+ V L LWDTA Sbjct: 3 HMQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTA 62 Query: 67 GQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVPIILVGCKVDL 126 G EDYDRLRPLSYP ++V LICFS+ P S ENV+ KW EV H C PIILVG K+DL Sbjct: 63 GLEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCPNTPIILVGTKLDL 122 Query: 127 RNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRASL 184 R+D TIE+L+++ P+T +G ++A +IGA Y ECSA T G++ VF+ A RA L Sbjct: 123 RDDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQRGLKTVFDEAIRAVL 180 >2J1L-A nrPDB Length = 214 Score = 243 bits (620), Expect = 4e-65, Method: Composition-based stats. Identities = 92/179 (51%), Positives = 125/179 (69%) Query: 12 KLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDTAGQEDY 71 K+V+VGDG CGKT LL+VF+ G FPE Y PTVFE Y+ +++V G+ V L +WDTAGQ+DY Sbjct: 36 KVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQDDY 95 Query: 72 DRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVPIILVGCKVDLRNDPQ 131 DRLRPL YPD++V+L+CF + P+S +N+ +W EV HFC+ VPII+VGCK DLR D Sbjct: 96 DRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTDLRKDKS 155 Query: 132 TIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRASLMGKSKT 190 + +LR+ G +PVT GQ +A +GA Y ECSA+ V VF+ A +L + + Sbjct: 156 LVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVALSSRGRN 214 >2W2X-A nrPDB Length = 185 Score = 242 bits (618), Expect = 8e-65, Method: Composition-based stats. Identities = 99/180 (55%), Positives = 125/180 (69%) Query: 5 VGNSIRRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWD 64 G S K V+VGD A GKTCLLI ++ FP Y+PTVF+NY A+V VD + V L LWD Sbjct: 4 SGGSQAIKCVVVGDVAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDSKPVNLGLWD 63 Query: 65 TAGQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVPIILVGCKV 124 TAGQEDYDRLRPLSYP ++V LICFS+ P S ENV+ KW EV H C PIILVG K+ Sbjct: 64 TAGQEDYDRLRPLSYPQTDVFLICFSLVSPASYENVRAKWFPEVRHHCPSTPIILVGTKL 123 Query: 125 DLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRASL 184 DLR+D TIE+L+++ P+T +G ++A +I + Y ECSA T G++ VF+ A RA L Sbjct: 124 DLRDDKDTIEKLKEKKLAPITYPQGLALAKEIDSVKYLECSALTQRGLKTVFDEAIRAVL 183 >1RYH-A nrPDB Length = 203 Score = 242 bits (618), Expect = 8e-65, Method: Composition-based stats. Identities = 102/198 (51%), Positives = 128/198 (64%), Gaps = 19/198 (9%) Query: 6 GNSIRRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDT 65 G+ K V+VGDGA GKTCLLI ++ FP Y+PTVF+NY A+V VDG+ V L LWDT Sbjct: 1 GSMQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDT 60 Query: 66 AGQEDYDRLRPLSYPD-------------------SNVVLICFSIDLPDSLENVQEKWIA 106 AGQEDYDRLRPLSYP ++V LICFS+ P S ENV+ KW Sbjct: 61 AGQEDYDRLRPLSYPQTVGETYGKDITSRGKDKPIADVFLICFSLVSPASFENVRAKWYP 120 Query: 107 EVLHFCQGVPIILVGCKVDLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSA 166 EV H C PIILVG K+DLR+D TIE+L+++ P+T +G ++A +IGA Y ECSA Sbjct: 121 EVRHHCPNTPIILVGTKLDLRDDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSA 180 Query: 167 KTGYGVREVFEAATRASL 184 T G++ VF+ A RA L Sbjct: 181 LTQRGLKTVFDEAIRAVL 198 >2WKQ-A nrPDB Length = 332 Score = 242 bits (618), Expect = 9e-65, Method: Composition-based stats. Identities = 98/177 (55%), Positives = 124/177 (70%) Query: 8 SIRRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDTAG 67 K V+VGDGA GKTCLLI ++ FP Y+PTVF+NY A+V VDG+ V L LWDTAG Sbjct: 153 KELIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAG 212 Query: 68 QEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVPIILVGCKVDLR 127 EDYDRLRPLSYP ++V LICFS+ P S +V+ KW EV H C PIILVG K+DLR Sbjct: 213 LEDYDRLRPLSYPQTDVFLICFSLVSPASFHHVRAKWYPEVRHHCPNTPIILVGTKLDLR 272 Query: 128 NDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRASL 184 +D TIE+L+++ P+T +G ++A +IGA Y ECSA T G++ VF+ A RA L Sbjct: 273 DDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQRGLKTVFDEAIRAVL 329 >5VCU-A nrPDB Length = 208 Score = 241 bits (615), Expect = 2e-64, Method: Composition-based stats. Identities = 97/198 (48%), Positives = 132/198 (66%), Gaps = 2/198 (1%) Query: 12 KLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDTAGQEDY 71 K V+VGDGA GKT LLI +S G FPE YVPTVF+NY ++ V +AL+DTAGQEDY Sbjct: 13 KCVVVGDGAVGKTALLIAYSSGCFPEDYVPTVFDNYNKNIPYGDGIVSIALYDTAGQEDY 72 Query: 72 DRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVPIILVGCKVDLRNDPQ 131 DRLRPLSYPD++V L+CFS++ P+SLEN KW E+ H+ PI+LVG K+DL+ D + Sbjct: 73 DRLRPLSYPDTDVFLVCFSLENPNSLENCHSKWAEELKHYNPDTPIVLVGTKLDLKKDEE 132 Query: 132 TIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRASLMGKSKTN 191 +++L+++ PVT+++GQ + D+I A GY ECSAKT + E F A ++ K + Sbjct: 133 YVKKLKEKKISPVTTEQGQEMKDKIKACGYIECSAKTMENLTEAFNMAIDIAM--KQRLK 190 Query: 192 GKAKKNTTEKKKKKCVLL 209 +KKKC LL Sbjct: 191 DAPPTANARNQKKKCQLL 208 >2J0V-A nrPDB Length = 212 Score = 240 bits (613), Expect = 3e-64, Method: Composition-based stats. Identities = 86/206 (41%), Positives = 122/206 (59%), Gaps = 6/206 (2%) Query: 3 QQVGNSIRRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELAL 62 + S K V VGDGA GKTC+LI ++ +FP Y+PTVF+N+ A+V VDG+ V L L Sbjct: 2 SHMSVSKFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVAVDGQIVNLGL 61 Query: 63 WDTAGQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVPIILVGC 122 WDTAGQEDY RLRPLSY +++ ++ FS+ S ENV +KW+ E+ F VPI+LVG Sbjct: 62 WDTAGQEDYSRLRPLSYRGADIFVLAFSLISKASYENVLKKWMPELRRFAPNVPIVLVGT 121 Query: 123 KVDLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRA 182 K+DLR+D + +TS +G+ + QIGA Y ECS+KT V+ VF+ A + Sbjct: 122 KLDLRDDKGYLAD----HTNVITSTQGEELRKQIGAAAYIECSSKTQQNVKAVFDTAIKV 177 Query: 183 SLMGKSKTNGKAKKNTTEKKKKKCVL 208 L + + ++ C + Sbjct: 178 VLQPPRRKE--VPRRRKNHRRSGCSI 201 >2NTY-C nrPDB Length = 180 Score = 239 bits (611), Expect = 6e-64, Method: Composition-based stats. Identities = 91/181 (50%), Positives = 120/181 (66%), Gaps = 2/181 (1%) Query: 5 VGNSIRRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWD 64 + S K V VGDGA GKTC+LI ++ FP YVPTVF+N+ A+V VDG V L LWD Sbjct: 1 MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWD 60 Query: 65 TAGQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVPIILVGCKV 124 TAGQEDY+RLRPLSY ++V ++ FS+ S ENV +KWI E+ H+ GVPIILVG K+ Sbjct: 61 TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKL 120 Query: 125 DLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRASL 184 DLR+D Q + G P+T+ +G+ + IG+ Y ECS+KT V+ VF+AA + L Sbjct: 121 DLRDDKQFF--IDHPGAVPITTNQGEELKKLIGSPIYIECSSKTQQNVKAVFDAAIKVVL 178 Query: 185 M 185 Sbjct: 179 Q 179 >3BWD-D nrPDB Length = 182 Score = 239 bits (610), Expect = 7e-64, Method: Composition-based stats. Identities = 91/182 (50%), Positives = 120/182 (65%), Gaps = 2/182 (1%) Query: 4 QVGNSIRRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALW 63 + S K V VGDGA GKTCLLI ++ FP YVPTVF+N+ A+V V+G V L LW Sbjct: 2 SMSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGATVNLGLW 61 Query: 64 DTAGQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVPIILVGCK 123 DTAGQEDY+RLRPLSY ++V ++ FS+ S ENV +KWI E+ H+ GVPI+LVG K Sbjct: 62 DTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTK 121 Query: 124 VDLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRAS 183 +DLR+D Q + G P+T+ +G+ + IGA Y ECS+K+ V+ VF+AA R Sbjct: 122 LDLRDDKQFF--IDHPGAVPITTVQGEELKKLIGAPAYIECSSKSQENVKGVFDAAIRVV 179 Query: 184 LM 185 L Sbjct: 180 LQ 181 >2WBL-C nrPDB Length = 180 Score = 238 bits (607), Expect = 2e-63, Method: Composition-based stats. Identities = 87/181 (48%), Positives = 120/181 (66%), Gaps = 2/181 (1%) Query: 5 VGNSIRRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWD 64 + + K V VGDGA GKTC+LI ++ FP YVPTVF+N+ A+V VDG V L LWD Sbjct: 1 MSTARFIKCVTVGDGAVGKTCMLISYTGNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60 Query: 65 TAGQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVPIILVGCKV 124 TAGQEDY+RLRPLSY ++V L+ FS+ S EN+ +KW+ E+ H+ G+PI+LVG K+ Sbjct: 61 TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENIHKKWLPELKHYAPGIPIVLVGTKL 120 Query: 125 DLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRASL 184 DLR+D Q ++ G +T+ +G+ + IGA Y ECS+KT V+ VF+ A R +L Sbjct: 121 DLRDDKQFLKD--HPGAASITTAQGEELRKMIGAVRYLECSSKTQQNVKAVFDTAIRVAL 178 Query: 185 M 185 Sbjct: 179 R 179 >3VHL-B nrPDB Length = 195 Score = 236 bits (602), Expect = 5e-63, Method: Composition-based stats. Identities = 91/192 (47%), Positives = 122/192 (63%) Query: 2 SQQVGNSIRRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELA 61 S K V+VGDGA GK CLLI ++ +FP YVPTVF+NY V + G L Sbjct: 2 SSGSSGMQTIKCVVVGDGAVGKNCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLG 61 Query: 62 LWDTAGQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVPIILVG 121 L+DTAGQEDYDRLRPLSYP ++V L+CFS+ P S ENV+EKW+ E+ H C P +LVG Sbjct: 62 LFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVG 121 Query: 122 CKVDLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATR 181 ++DLR+DP TIE+L + Q+P+T + + +A + A Y ECSA T G++ VF+ A Sbjct: 122 TQIDLRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAIL 181 Query: 182 ASLMGKSKTNGK 193 A+L + Sbjct: 182 AALEPPEPKKSR 193 >2ATX-A nrPDB Length = 194 Score = 234 bits (598), Expect = 2e-62, Method: Composition-based stats. Identities = 88/182 (48%), Positives = 126/182 (69%) Query: 3 QQVGNSIRRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELAL 62 ++ K V+VGDGA GKTCLL+ ++ FPE YVPTVF++Y V V G++ L L Sbjct: 11 AHGPGALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGL 70 Query: 63 WDTAGQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVPIILVGC 122 +DTAGQEDYDRLRPLSYP ++V LICFS+ P S +NV+E+W+ E+ + VP +L+G Sbjct: 71 YDTAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPFLLIGT 130 Query: 123 KVDLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRA 182 ++DLR+DP+T+ +L ++P+ ++GQ +A +IGA Y ECSA T G++ VF+ A A Sbjct: 131 QIDLRDDPKTLARLNDMKEKPICVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIA 190 Query: 183 SL 184 L Sbjct: 191 IL 192 >4U5X-A nrPDB Length = 178 Score = 232 bits (593), Expect = 7e-62, Method: Composition-based stats. Identities = 83/180 (46%), Positives = 116/180 (64%), Gaps = 2/180 (1%) Query: 6 GNSIRRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDT 65 G++ K V VGDGA GKTC+LI ++ +FP Y+PTVF+N+ A+V VDG V L LWDT Sbjct: 1 GSTRFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVSVDGSVVNLGLWDT 60 Query: 66 AGQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVPIILVGCKVD 125 AG EDY RLRPLSY ++V ++ FS+ S ENVQ+KW+ E+ F GVP++LVG K+D Sbjct: 61 AGLEDYSRLRPLSYRGADVFILSFSLISRASYENVQKKWMPELRRFAPGVPVVLVGTKLD 120 Query: 126 LRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRASLM 185 LR D + +T+++G+ + IGA Y ECS+KT ++ VF+ A + L Sbjct: 121 LREDRAYLAD--HPASSIITTEQGEELRKLIGAVAYIECSSKTQRNIKAVFDTAIKVVLQ 178 >4QXA-A nrPDB Length = 208 Score = 222 bits (567), Expect = 6e-59, Method: Composition-based stats. Identities = 56/206 (27%), Positives = 97/206 (47%), Gaps = 20/206 (9%) Query: 5 VGNSIRRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYV-ADVEVDGRRVELALW 63 G S K++++GDG GK+ L+ + +F T+ ++ D+EVDG V + +W Sbjct: 3 AGKSSLFKIILLGDGGVGKSSLMNRYVTNKFDSQLFHTIGVEFLNKDLEVDGHFVTMQIW 62 Query: 64 DTAGQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFC-----QGVPII 118 DTAG E + LR Y S+ L+ FS+D S +N+ W E +++ + P + Sbjct: 63 DTAGLERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLS-NWKKEFIYYADVKEPESFPFV 121 Query: 119 LVGCKVDLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEA 178 ++G K D+ ++ V+++E Q+ G Y+E SAK V FE Sbjct: 122 ILGNKTDI-------------KERQVSTEEAQAWCKDNGDYPYFETSAKDSTNVAAAFEE 168 Query: 179 ATRASLMGKSKTNGKAKKNTTEKKKK 204 A R L + ++ + +T +K Sbjct: 169 AVRRILATEDRSEHLIQTDTVNLHRK 194 >4MIT-A nrPDB Length = 186 Score = 222 bits (566), Expect = 9e-59, Method: Composition-based stats. Identities = 89/184 (48%), Positives = 123/184 (66%) Query: 3 QQVGNSIRRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELAL 62 KLV+VGDGA GKTCLLI +S +FPE Y+PTVF+NYV + R+++LAL Sbjct: 3 AMSEKPTSIKLVVVGDGAVGKTCLLISYSIRKFPEDYIPTVFDNYVVSLTAGTRQIQLAL 62 Query: 63 WDTAGQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVPIILVGC 122 WDTAG E+YD+LRPLSY +++ LICFS+ S +NV KW EV+HF VPIILVG Sbjct: 63 WDTAGLEEYDQLRPLSYSSASIFLICFSVTSSVSYDNVITKWHPEVIHFAPKVPIILVGT 122 Query: 123 KVDLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRA 182 K+D RNDP +++L ++G + + +G+ + ++I A Y ECSAKT ++ VF+ A + Sbjct: 123 KLDTRNDPAIVKRLTEQGMTVINTAKGEELKNRIKAVKYIECSAKTSENLKTVFDEAVKT 182 Query: 183 SLMG 186 LM Sbjct: 183 VLMN 186 >2Q3H-A nrPDB Length = 201 Score = 222 bits (565), Expect = 1e-58, Method: Composition-based stats. Identities = 78/180 (43%), Positives = 116/180 (64%) Query: 12 KLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDTAGQEDY 71 K V+VGDGA GKT L++ ++ +P Y+PT F+N+ A V VDGR V L L DTAGQ+++ Sbjct: 22 KCVLVGDGAVGKTSLVVSYTTNGYPTEYIPTAFDNFSAVVSVDGRPVRLQLCDTAGQDEF 81 Query: 72 DRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVPIILVGCKVDLRNDPQ 131 D+LRPL Y ++++ L+CFS+ P S +NV EKW+ E+ C PIILVG + DLR D + Sbjct: 82 DKLRPLCYTNTDIFLLCFSVVSPSSFQNVSEKWVPEIRCHCPKAPIILVGTQSDLREDVK 141 Query: 132 TIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRASLMGKSKTN 191 + +L + ++PV + + +A++I A Y ECSA T ++EVF+AA A + Sbjct: 142 VLIELDKCKEKPVPEEAAKLLAEEIKAASYIECSALTQKNLKEVFDAAIVAGIQYSDTQQ 201 >5SZH-B nrPDB Length = 203 Score = 215 bits (548), Expect = 1e-56, Method: Composition-based stats. Identities = 51/194 (26%), Positives = 95/194 (48%), Gaps = 18/194 (9%) Query: 8 SIRRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENY-VADVEVDGRRVELALWDTA 66 KL+++GD GK+CLL+ F+ + E Y+ T+ ++ + +E+DG+ ++L +WDTA Sbjct: 8 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTA 67 Query: 67 GQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFC-QGVPIILVGCKVD 125 GQE + + Y ++ +++ + + +S NV++ W+ E+ + + V +LVG K D Sbjct: 68 GQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQ-WLQEIDRYASENVNKLLVGNKSD 126 Query: 126 LRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRAS-- 183 L ++ V + + AD +G + E SAK V + F Sbjct: 127 LTT------------KKVVDNTTAKEFADSLG-IPFLETSAKNATNVEQAFMTMAAEIKK 173 Query: 184 LMGKSKTNGKAKKN 197 MG +G + N Sbjct: 174 RMGPGAASGGERPN 187 >2RHD-A nrPDB Length = 175 Score = 213 bits (543), Expect = 4e-56, Method: Composition-based stats. Identities = 52/175 (29%), Positives = 92/175 (52%), Gaps = 16/175 (9%) Query: 8 SIRRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENY-VADVEVDGRRVELALWDTA 66 KL+++GD GK+CLL+ F+ + + Y+ T+ ++ + + ++ + V+L +WDTA Sbjct: 7 DYLFKLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTISLENKTVKLQIWDTA 66 Query: 67 GQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFC-QGVPIILVGCKVD 125 GQE + + Y ++ ++I + + DS +NV++ WI E+ + + V +LVG K D Sbjct: 67 GQERFRTITSSYYRGAHGIIIVYDVTDRDSFDNVKQ-WIQEIDRYAMENVNKLLVGNKCD 125 Query: 126 LRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAAT 180 L ++ VTS EG+ +AD G + E SAK Y V + F Sbjct: 126 LV------------SKRVVTSDEGRELADSHG-IKFIETSAKNAYNVEQAFHTMA 167 >1GWN-A nrPDB Length = 205 Score = 212 bits (541), Expect = 7e-56, Method: Composition-based stats. Identities = 92/180 (51%), Positives = 122/180 (67%), Gaps = 1/180 (0%) Query: 8 SIRRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDTAG 67 +++ K+V+VGD CGKT LL VF+K FPE YVPTVFENY A E+D +R+EL+LWDT+G Sbjct: 26 NVKCKIVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENYTASFEIDTQRIELSLWDTSG 85 Query: 68 QEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVPIILVGCKVDLR 127 YD +RPLSYPDS+ VLICF I P++L++V +KW E+ FC ++LVGCK DLR Sbjct: 86 SPYYDNVRPLSYPDSDAVLICFDISRPETLDSVLKKWKGEIQEFCPNTKMLLVGCKSDLR 145 Query: 128 NDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYG-VREVFEAATRASLMG 186 D T+ +L Q PV+ +G ++A QIGA Y ECSA VR++F AT A + Sbjct: 146 TDVSTLVELSNHRQTPVSYDQGANMAKQIGAATYIECSALQSENSVRDIFHVATLACVNK 205 >1WMS-A nrPDB Length = 177 Score = 212 bits (539), Expect = 1e-55, Method: Composition-based stats. Identities = 55/190 (28%), Positives = 92/190 (48%), Gaps = 20/190 (10%) Query: 5 VGNSIRRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYV-ADVEVDGRRVELALW 63 G S K++++GDG GK+ L+ + +F T+ ++ D+EVDG V + +W Sbjct: 2 AGKSSLFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIW 61 Query: 64 DTAGQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFC-----QGVPII 118 DTAGQE + LR Y S+ L+ FS+D S +N+ W E +++ + P + Sbjct: 62 DTAGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLS-NWKKEFIYYADVKEPESFPFV 120 Query: 119 LVGCKVDLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEA 178 ++G K+D+ ++ V+++E Q+ G Y+E SAK V FE Sbjct: 121 ILGNKIDI-------------SERQVSTEEAQAWCRDNGDYPYFETSAKDATNVAAAFEE 167 Query: 179 ATRASLMGKS 188 A R L + Sbjct: 168 AVRRVLATED 177 >1M7B-A nrPDB Length = 184 Score = 211 bits (537), Expect = 2e-55, Method: Composition-based stats. Identities = 92/183 (50%), Positives = 122/183 (66%), Gaps = 1/183 (0%) Query: 5 VGNSIRRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWD 64 +++ K+V+VGD CGKT LL VF+K FPE YVPTVFENY A E+D +R+EL+LWD Sbjct: 2 SNQNVKCKIVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENYTASFEIDTQRIELSLWD 61 Query: 65 TAGQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVPIILVGCKV 124 T+G YD +RPLSYPDS+ VLICF I P++L++V +KW E+ FC ++LVGCK Sbjct: 62 TSGSPYYDNVRPLSYPDSDAVLICFDISRPETLDSVLKKWKGEIQEFCPNTKMLLVGCKS 121 Query: 125 DLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYG-VREVFEAATRAS 183 DLR D T+ +L Q PV+ +G ++A QIGA Y ECSA VR++F AT A Sbjct: 122 DLRTDVSTLVELSNHRQTPVSYDQGANMAKQIGAATYIECSALQSENSVRDIFHVATLAC 181 Query: 184 LMG 186 + Sbjct: 182 VNK 184 >3L0I-B nrPDB Length = 199 Score = 210 bits (535), Expect = 3e-55, Method: Composition-based stats. Identities = 47/183 (25%), Positives = 88/183 (48%), Gaps = 16/183 (8%) Query: 8 SIRRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENY-VADVEVDGRRVELALWDTA 66 KL+++GD GK+CLL+ F+ + E Y+ T+ ++ + +E+DG+ ++L +WDTA Sbjct: 31 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTA 90 Query: 67 GQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFC-QGVPIILVGCKVD 125 GQE + + Y ++ +++ + + +S NV++ W+ E+ + + V +LVG K D Sbjct: 91 GQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYASENVNKLLVGNKCD 149 Query: 126 LRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRASLM 185 L ++ V + AD +G + E SAK V + F Sbjct: 150 LTT------------KKVVDYTTAKEFADSLG-IPFLETSAKNATNVEQSFMTMAAEIKK 196 Query: 186 GKS 188 Sbjct: 197 RMG 199 >2OCB-A nrPDB Length = 180 Score = 208 bits (530), Expect = 1e-54, Method: Composition-based stats. Identities = 59/193 (30%), Positives = 94/193 (48%), Gaps = 20/193 (10%) Query: 5 VGNSIRRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYV-ADVEVDGRRVELALW 63 G S+ K++++GDG GK+ L+ + +F T+ ++ D+EVDGR V L +W Sbjct: 2 SGKSLLLKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFVTLQIW 61 Query: 64 DTAGQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFC-----QGVPII 118 DTAGQE + LR Y ++ L+ FS+D S EN+ W E +++ + P + Sbjct: 62 DTAGQERFKSLRTPFYRGADCCLLTFSVDDRQSFENLG-NWQKEFIYYADVKDPEHFPFV 120 Query: 119 LVGCKVDLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEA 178 ++G KVD + + VT++E Q+ + G Y E SAK V FE Sbjct: 121 VLGNKVDKED-------------RQVTTEEAQTWCMENGDYPYLETSAKDDTNVTVAFEE 167 Query: 179 ATRASLMGKSKTN 191 A R L + + Sbjct: 168 AVRQVLAVEEQLE 180 >5SZI-A nrPDB Length = 209 Score = 206 bits (525), Expect = 4e-54, Method: Composition-based stats. Identities = 50/199 (25%), Positives = 94/199 (47%), Gaps = 17/199 (8%) Query: 8 SIRRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENY-VADVEVDGRRVELALWDTA 66 KL+++GD GKTC+L FS+ F ++ T+ ++ + +E+DG+R++L +WDTA Sbjct: 8 DYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTA 67 Query: 67 GQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEV-LHFCQGVPIILVGCKVD 125 GQE + + Y + +++ + I S +N++ WI + H V +++G K D Sbjct: 68 GQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIR-NWIRNIEEHASADVEKMILGNKCD 126 Query: 126 LRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRASLM 185 + + ++ V+ + G+ +A G + E SAK V F R Sbjct: 127 VND------------KRQVSKERGEKLALDYG-IKFMETSAKANINVENAFFTLARDIKA 173 Query: 186 GKSKT-NGKAKKNTTEKKK 203 K G + + + + K Sbjct: 174 KMDKKLEGNSPQGSNQGVK 192 >4LHX-A nrPDB Length = 186 Score = 205 bits (523), Expect = 9e-54, Method: Composition-based stats. Identities = 48/185 (25%), Positives = 88/185 (47%), Gaps = 16/185 (8%) Query: 8 SIRRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENY-VADVEVDGRRVELALWDTA 66 KL+++GD GKTC+L FS+ F ++ T+ ++ + +E+DG+R++L +WDTA Sbjct: 8 DYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTA 67 Query: 67 GQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEV-LHFCQGVPIILVGCKVD 125 GQE + + Y + +++ + I S +N++ WI + H V +++G K D Sbjct: 68 GQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIR-NWIRNIEEHASADVEKMILGNKCD 126 Query: 126 LRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRASLM 185 + + ++ V+ + G+ +A G + E SAK V F R Sbjct: 127 VND------------KRQVSKERGEKLALDYG-IKFMETSAKANINVENAFFTLARDIKA 173 Query: 186 GKSKT 190 K Sbjct: 174 KMDKK 178 >2WWX-A nrPDB Length = 175 Score = 205 bits (522), Expect = 1e-53, Method: Composition-based stats. Identities = 47/184 (25%), Positives = 88/184 (47%), Gaps = 16/184 (8%) Query: 8 SIRRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENY-VADVEVDGRRVELALWDTA 66 KL+++GD GK+CLL+ F+ + E Y+ T+ ++ + +E+DG+ ++L +WDTA Sbjct: 6 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTA 65 Query: 67 GQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFC-QGVPIILVGCKVD 125 GQE + + Y ++ +++ + + +S NV++ W+ E+ + + V +LVG K D Sbjct: 66 GQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYASENVNKLLVGIKCD 124 Query: 126 LRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRASLM 185 L ++ V + AD +G + E SAK V + F Sbjct: 125 LTT------------KKVVDYTTAKEFADSLG-IPFLETSAKNATNVEQSFMTMAAEIKK 171 Query: 186 GKSK 189 Sbjct: 172 RMGP 175 >3CUE-F nrPDB Length = 206 Score = 205 bits (521), Expect = 1e-53, Method: Composition-based stats. Identities = 53/200 (26%), Positives = 94/200 (47%), Gaps = 19/200 (9%) Query: 8 SIRRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENY-VADVEVDGRRVELALWDTA 66 KL+++G+ GK+CLL+ FS + Y+ T+ ++ + VE+DG+ V+L +WDTA Sbjct: 6 DYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWDTA 65 Query: 67 GQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVPI-ILVGCKVD 125 GQE + + Y S+ ++I + + +S V+ W+ E+ + + +LVG K D Sbjct: 66 GQERFRTITSSYYRGSHGIIIVYDVTDQESFNGVK-MWLQEIDRYATSTVLKLLVGNKCD 124 Query: 126 LRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRASLM 185 L++ ++ V + AD + E SA V + F R Sbjct: 125 LKD------------KRVVEYDVAKEFADA-NKMPFLETSALDSTNVEDAFLTMARQI-- 169 Query: 186 GKSKTNGKAKKNTTEKKKKK 205 K + + TT+KK+ K Sbjct: 170 -KESMSQQNLNETTQKKEDK 188 >6IF2-B nrPDB Length = 186 Score = 205 bits (521), Expect = 2e-53, Method: Composition-based stats. Identities = 54/186 (29%), Positives = 91/186 (48%), Gaps = 15/186 (8%) Query: 11 RKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENY-VADVEVDGRRVELALWDTAGQE 69 KL+I+GD GK+ LL+ F+ F Y+ T+ ++ + VE++G +V+L +WDTAG E Sbjct: 15 FKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAGLE 74 Query: 70 DYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVPIILVGCKVDLRND 129 + + Y ++ V++ + + +S NV+ +W+ E+ C V ILVG K D Sbjct: 75 RFRTITSTYYRGTHGVIVVYDVTSAESFVNVK-RWLHEINQNCDDVCRILVGNKND---- 129 Query: 130 PQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRASLMGKSK 189 ++ V +++ A Q+G + E SAK V E+F T L K Sbjct: 130 --------DPERKVVETEDAYKFAGQMGIQLF-ETSAKENVNVEEMFNCITELVLRAKKD 180 Query: 190 TNGKAK 195 K + Sbjct: 181 NLAKQQ 186 >4M8N-E nrPDB Length = 199 Score = 204 bits (519), Expect = 3e-53, Method: Composition-based stats. Identities = 53/178 (29%), Positives = 86/178 (48%), Gaps = 13/178 (7%) Query: 7 NSIRRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDTA 66 + KLV++G G GK+ L + F +G F E Y PT+ ++Y VEVD ++ L + DTA Sbjct: 3 HMREYKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDAQQCMLEILDTA 62 Query: 67 GQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVL-HFCQGVPIILVGCKVD 125 G E + +R L + + +SI + ++Q+ + VP+ILVG K D Sbjct: 63 GTEQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTDDVPMILVGNKCD 122 Query: 126 LRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRAS 183 L + ++ V ++GQ++A Q + E SAK+ V E+F R Sbjct: 123 LED------------ERVVGKEQGQNLARQWNNCAFLESSAKSKINVNEIFYDLVRQI 168 >5SZJ-A nrPDB Length = 202 Score = 203 bits (516), Expect = 5e-53, Method: Composition-based stats. Identities = 47/181 (25%), Positives = 89/181 (49%), Gaps = 16/181 (8%) Query: 8 SIRRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENY-VADVEVDGRRVELALWDTA 66 + KL+++GD GKTC+L FS F ++ T+ ++ + VE+ G++++L +WDTA Sbjct: 9 DLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTA 68 Query: 67 GQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEV-LHFCQGVPIILVGCKVD 125 GQE + + Y + +++ + I S EN+ KW+ + H + V +L+G K D Sbjct: 69 GQERFHTITTSYYRGAMGIMLVYDITNGKSFENIS-KWLRNIDEHANEDVERMLLGNKCD 127 Query: 126 LRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRASLM 185 + + ++ V +G+ +A + G ++E SAK + + F L Sbjct: 128 MDD------------KRVVPKGKGEQIAREHG-IRFFETSAKANINIEKAFLTLAEDILR 174 Query: 186 G 186 Sbjct: 175 K 175 >5FBL-B nrPDB Length = 221 Score = 203 bits (516), Expect = 6e-53, Method: Composition-based stats. Identities = 50/193 (25%), Positives = 87/193 (45%), Gaps = 16/193 (8%) Query: 8 SIRRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENY-VADVEVDGRRVELALWDTA 66 K+V++GD GK+ LL F++ +F T+ + ++VDG+ ++ +WDTA Sbjct: 14 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTA 73 Query: 67 GQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVL-HFCQGVPIILVGCKVD 125 GQE Y + Y + L+ + I + ENV E+W+ E+ H + I+LVG K D Sbjct: 74 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENV-ERWLKELRDHADSNIVIMLVGNKSD 132 Query: 126 LRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRASLM 185 LR+ + V + E ++ A++ G + E SA V F+ Sbjct: 133 LRH------------LRAVPTDEARAFAEKNG-LSFIETSALDSTNVEAAFQTILTEIYR 179 Query: 186 GKSKTNGKAKKNT 198 S+ ++ Sbjct: 180 IVSQKQMSDRREN 192 >5CM8-B nrPDB Length = 203 Score = 203 bits (516), Expect = 6e-53, Method: Composition-based stats. Identities = 67/209 (32%), Positives = 97/209 (46%), Gaps = 19/209 (9%) Query: 6 GNSIRRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDT 65 K+++VG G GK+ L + F +F E Y PT ++Y V +DG V++ + DT Sbjct: 9 AGPALHKVIMVGSGGVGKSALTLQFMYDEFVEDYEPTKADSYRKKVVLDGEEVQIDILDT 68 Query: 66 AGQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFC--QGVPIILVGCK 123 AGQEDY +R + L FSI +S + QE + ++L + +P +LVG K Sbjct: 69 AGQEDYAAIRDNYFRSGEGFLCVFSITDDESFQATQE-FREQILRVKNDESIPFLLVGNK 127 Query: 124 VDLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRAS 183 DL + ++ V E Q A Q A Y E SAKT V +VF R Sbjct: 128 CDLND------------KRKVPLSECQLRAQQW-AVPYVETSAKTRENVDKVFFDLMREI 174 Query: 184 LMGK---SKTNGKAKKNTTEKKKKKCVLL 209 K SK K+ +K++ KC LL Sbjct: 175 RSRKTEDSKATSGRAKDRCKKRRLKCTLL 203 >5LPN-A nrPDB Length = 177 Score = 202 bits (514), Expect = 8e-53, Method: Composition-based stats. Identities = 47/181 (25%), Positives = 89/181 (49%), Gaps = 16/181 (8%) Query: 8 SIRRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENY-VADVEVDGRRVELALWDTA 66 + KL+++GD GKTC+L FS F ++ T+ ++ + VE+ G++++L +WDTA Sbjct: 9 DLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTA 68 Query: 67 GQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEV-LHFCQGVPIILVGCKVD 125 GQE + + Y + +++ + I S EN+ KW+ + H + V +L+G K D Sbjct: 69 GQERFHTITTSYYRGAMGIMLVYDITNGKSFENIS-KWLRNIDEHANEDVERMLLGNKCD 127 Query: 126 LRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRASLM 185 + + ++ V +G+ +A + G ++E SAK + + F L Sbjct: 128 MDD------------KRVVPKGKGEQIAREHG-IRFFETSAKANINIEKAFLTLAEDILR 174 Query: 186 G 186 Sbjct: 175 K 175 >4G01-B nrPDB Length = 181 Score = 202 bits (514), Expect = 9e-53, Method: Composition-based stats. Identities = 58/193 (30%), Positives = 89/193 (46%), Gaps = 17/193 (8%) Query: 1 MSQQVGNSIRRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFE-NYVADVEVDGRRVE 59 M+ SI KLV++GD GK+ L++ F K QF E T+ + + V+ V+ Sbjct: 3 MAAAGNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVK 62 Query: 60 LALWDTAGQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFC-QGVPII 118 +WDTAGQE Y L P+ Y + +I F + S E + KW+ E+ + + Sbjct: 63 FEIWDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAK-KWVQELQAQGNPNMVMA 121 Query: 119 LVGCKVDLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEA 178 L G K DL + + VT+++ Q+ A + G + E SAKT V+E+F Sbjct: 122 LAGNKSDLLD------------ARKVTAEDAQTYAQENG-LFFMETSAKTATNVKEIFYE 168 Query: 179 ATRASLMGKSKTN 191 R L T Sbjct: 169 IARR-LPRVQPTE 180 >1Z0A-A nrPDB Length = 174 Score = 202 bits (514), Expect = 9e-53, Method: Composition-based stats. Identities = 48/177 (27%), Positives = 84/177 (47%), Gaps = 14/177 (7%) Query: 8 SIRRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENY-VADVEVDGRRVELALWDTA 66 + K +I+GD GK+CLL+ F+ +F V+ T+ + + +DG++++L +WDTA Sbjct: 8 AYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTA 67 Query: 67 GQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVPIILVGCKVDL 126 GQE + + Y + L+ + I D+ ++ H + I+L+G K DL Sbjct: 68 GQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDL 127 Query: 127 RNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRAS 183 E ++ V +EG++ A + G + E SAKT V E F + Sbjct: 128 ------------ESRREVKKEEGEAFAREHGLI-FMETSAKTASNVEEAFINTAKEI 171 >1YZN-A nrPDB Length = 185 Score = 202 bits (513), Expect = 1e-52, Method: Composition-based stats. Identities = 47/178 (26%), Positives = 84/178 (47%), Gaps = 16/178 (8%) Query: 8 SIRRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENY-VADVEVDGRRVELALWDTA 66 KL+++G+ GK+CLL+ FS + Y+ T+ ++ + VE+DG+ V+L +WDTA Sbjct: 19 DYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWDTA 78 Query: 67 GQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVPI-ILVGCKVD 125 GQE + + Y S+ ++I + + +S V+ W+ E+ + + +LVG K D Sbjct: 79 GQERFRTITSSYYRGSHGIIIVYDVTDQESFNGVK-MWLQEIDRYATSTVLKLLVGNKCD 137 Query: 126 LRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRAS 183 L++ ++ V + AD + E SA V + F R Sbjct: 138 LKD------------KRVVEYDVAKEFADA-NKMPFLETSALDSTNVEDAFLTMARQI 182 >2A5J-A nrPDB Length = 191 Score = 202 bits (513), Expect = 1e-52, Method: Composition-based stats. Identities = 49/178 (27%), Positives = 84/178 (47%), Gaps = 14/178 (7%) Query: 7 NSIRRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENY-VADVEVDGRRVELALWDT 65 S K +I+GD GK+CLL+ F+ +F V+ T+ + V +DG++++L +WDT Sbjct: 18 GSYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWDT 77 Query: 66 AGQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVPIILVGCKVD 125 AGQE + + Y + L+ + I ++ ++ H + I+L+G K D Sbjct: 78 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNKSD 137 Query: 126 LRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRAS 183 L E ++ V +EG++ A + G + E SAKT V E F + Sbjct: 138 L------------ESRRDVKREEGEAFAREHGLI-FMETSAKTACNVEEAFINTAKEI 182 >3CPH-A nrPDB Length = 213 Score = 202 bits (513), Expect = 1e-52, Method: Composition-based stats. Identities = 46/196 (23%), Positives = 94/196 (47%), Gaps = 19/196 (9%) Query: 1 MSQQVGN----SIRRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENY-VADVEVDG 55 +S GN K++++GD GK+CLL+ F + +F ++ T+ ++ + V+++G Sbjct: 7 VSASSGNGKSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDING 66 Query: 56 RRVELALWDTAGQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGV 115 ++V+L LWDTAGQE + + Y + +++ + + + N+++ + H Sbjct: 67 KKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEA 126 Query: 116 PIILVGCKVDLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREV 175 ++LVG K D+ + VT+ +G+++A ++G + E SAK V E+ Sbjct: 127 QLLLVGNKSDMET-------------RVVTADQGEALAKELG-IPFIESSAKNDDNVNEI 172 Query: 176 FEAATRASLMGKSKTN 191 F + Sbjct: 173 FFTLAKLIQEKIDSNK 188 >4DXA-A nrPDB Length = 169 Score = 201 bits (512), Expect = 2e-52, Method: Composition-based stats. Identities = 53/179 (29%), Positives = 86/179 (48%), Gaps = 13/179 (7%) Query: 6 GNSIRRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDT 65 G+ KLV++G GK+ L + F +G F E Y PT+ ++Y VEVD ++ L + DT Sbjct: 1 GSMREYKLVVLGSVGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDAQQCMLEILDT 60 Query: 66 AGQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVL-HFCQGVPIILVGCKV 124 AG E + +R L + + +SI + ++Q+ + VP+ILVG K Sbjct: 61 AGTEQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTDDVPMILVGNKC 120 Query: 125 DLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRAS 183 DL + ++ V ++GQ++A Q + E SAK+ V E+F R Sbjct: 121 DLED------------ERVVGKEQGQNLARQWNNCAFLESSAKSKINVNEIFYDLVRQI 167 >5LEF-A nrPDB Length = 191 Score = 201 bits (511), Expect = 2e-52, Method: Composition-based stats. Identities = 62/205 (30%), Positives = 103/205 (50%), Gaps = 18/205 (8%) Query: 4 QVGNSIR-RKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYV-ADVEVDGRRVELA 61 +GN +R KLV +G+ + GKT L+ F F Y T+ +++ + ++ R V L Sbjct: 2 AMGNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQ 61 Query: 62 LWDTAGQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVL-HFCQGVPIILV 120 LWDTAG E + L P DS V ++ + I +S + KWI +V V I+LV Sbjct: 62 LWDTAGLERFRSLIPSYIRDSTVAVVVYDITNVNSFQQT-TKWIDDVRTERGSDVIIMLV 120 Query: 121 GCKVDLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAAT 180 G K DL + ++ V+ +EG+ A ++ + E SAK GY V+++F Sbjct: 121 GNKTDLAD------------KRQVSIEEGERKAKELNVM-FIETSAKAGYNVKQLFRRVA 167 Query: 181 RASLMGKSKTNGKAKKNTTEKKKKK 205 A+L G T +++++ + K +K Sbjct: 168 -AALPGMESTQDRSREDMIDIKLEK 191 >2GF9-A nrPDB Length = 189 Score = 201 bits (511), Expect = 2e-52, Method: Composition-based stats. Identities = 51/180 (28%), Positives = 89/180 (49%), Gaps = 16/180 (8%) Query: 6 GNSIRRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENY-VADVEVDGRRVELALWD 64 G+ KL+++G+ + GKT L ++ F +V TV ++ V V +R++L +WD Sbjct: 18 GSDYMFKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTVYRHDKRIKLQIWD 77 Query: 65 TAGQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFC-QGVPIILVGCK 123 TAGQE Y + Y + L+ + I +S VQ+ W ++ + +ILVG K Sbjct: 78 TAGQERYRTITTAYYRGAMGFLLMYDIANQESFAAVQD-WATQIKTYSWDNAQVILVGNK 136 Query: 124 VDLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRAS 183 DL + ++ V +++G+ +AD +G ++E SAK V++VFE Sbjct: 137 CDLED------------ERVVPAEDGRRLADDLGF-EFFEASAKENINVKQVFERLVDVI 183 >5LDD-C nrPDB Length = 207 Score = 200 bits (510), Expect = 2e-52, Method: Composition-based stats. Identities = 52/216 (24%), Positives = 96/216 (44%), Gaps = 23/216 (10%) Query: 2 SQQVGNSIRRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYV-ADVEVDGRRVEL 60 S + K++I+GD GKT L+ + +F Y T+ +++ +V VD R+V + Sbjct: 2 SMSSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTREVMVDDRQVTM 61 Query: 61 ALWDTAGQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVL-----HFCQGV 115 LWDTAGQE + L Y ++ ++ F ++ S + + + W E L + Sbjct: 62 QLWDTAGQERFQSLGVAFYRGADCCVLVFDVNNAKSFDAL-DSWRDEFLIQASPRDPENF 120 Query: 116 PIILVGCKVDLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREV 175 P +++G K+D+ +E ++ ++++ Q+ G Y+E SAK V E Sbjct: 121 PFVVLGIKIDV-----------EESKRVISTKRAQTFCQSKGGIPYFETSAKEAINVEEA 169 Query: 176 FEAATRASLMGKSKTN-----GKAKKNTTEKKKKKC 206 F+ R +LM + E ++ C Sbjct: 170 FQVIARNALMQEESEEFSGDFQDPINIHIENERDGC 205 >1Z0F-A nrPDB Length = 179 Score = 200 bits (510), Expect = 3e-52, Method: Composition-based stats. Identities = 51/178 (28%), Positives = 85/178 (47%), Gaps = 16/178 (8%) Query: 8 SIRRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENY-VADVEVDGRRVELALWDTA 66 S K +I+GD GK+CLL F++ +F T+ + +EV G++++L +WDTA Sbjct: 13 SYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTA 72 Query: 67 GQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFC-QGVPIILVGCKVD 125 GQE + + Y + L+ + I + ++ W+ + + IIL+G K D Sbjct: 73 GQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSS-WLTDARNLTNPNTVIILIGNKAD 131 Query: 126 LRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRAS 183 L E Q+ VT +E + A++ G + E SAKTG V + F A + Sbjct: 132 L------------EAQRDVTYEEAKQFAEENGLL-FLEASAKTGENVEDAFLEAAKKI 176 >1TU4-A nrPDB Length = 171 Score = 200 bits (509), Expect = 4e-52, Method: Composition-based stats. Identities = 59/181 (32%), Positives = 89/181 (49%), Gaps = 17/181 (9%) Query: 5 VGNSI-RRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVAD-VEVDGRRVELAL 62 +GN I + KLV++G+ A GK+ L++ F KGQF E T+ ++ V +D V+ + Sbjct: 1 MGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEI 60 Query: 63 WDTAGQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFC-QGVPIILVG 121 WDTAGQE Y L P+ Y + ++ + I +S + W+ E+ + I L G Sbjct: 61 WDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAK-NWVKELQRQASPNIVIALSG 119 Query: 122 CKVDLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATR 181 K DL N ++ V QE QS AD + + E SAKT V E+F A + Sbjct: 120 NKADLAN------------KRAVDFQEAQSYADD-NSLLFMETSAKTSMNVNEIFMAIAK 166 Query: 182 A 182 Sbjct: 167 K 167 >2OCY-C nrPDB Length = 170 Score = 200 bits (509), Expect = 4e-52, Method: Composition-based stats. Identities = 43/181 (23%), Positives = 90/181 (49%), Gaps = 15/181 (8%) Query: 11 RKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENY-VADVEVDGRRVELALWDTAGQE 69 K++++GD GK+CLL+ F + +F ++ T+ ++ + V+++G++V+L LWDTAGQE Sbjct: 4 MKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQE 63 Query: 70 DYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVPIILVGCKVDLRND 129 + + Y + +++ + + + N+++ + H ++LVG K D+ Sbjct: 64 RFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSDMET- 122 Query: 130 PQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRASLMGKSK 189 + VT+ +G+++A ++G + E SAK V E+F + Sbjct: 123 ------------RVVTADQGEALAKELG-IPFIESSAKNDDNVNEIFFTLAKLIQEKIDS 169 Query: 190 T 190 Sbjct: 170 N 170 >1ZBD-A nrPDB Length = 203 Score = 199 bits (507), Expect = 6e-52, Method: Composition-based stats. Identities = 49/199 (24%), Positives = 93/199 (46%), Gaps = 16/199 (8%) Query: 8 SIRRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENY-VADVEVDGRRVELALWDTA 66 K++I+G+ + GKT L ++ F +V TV ++ V + + +R++L +WDTA Sbjct: 6 DYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTA 65 Query: 67 GQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFC-QGVPIILVGCKVD 125 G E Y + Y + ++ + I +S VQ+ W ++ + ++LVG K D Sbjct: 66 GLERYRTITTAYYRGAMGFILMYDITNEESFNAVQD-WSTQIKTYSWDNAQVLLVGNKCD 124 Query: 126 LRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRASLM 185 + + ++ V+S+ G+ +AD +G ++E SAK V++ FE Sbjct: 125 MED------------ERVVSSERGRQLADHLGF-EFFEASAKDNINVKQTFERLVDVICE 171 Query: 186 GKSKTNGKAKKNTTEKKKK 204 S++ A T K+ Sbjct: 172 KMSESLDTADPAVTGAKQG 190 >2F9L-A nrPDB Length = 199 Score = 199 bits (506), Expect = 8e-52, Method: Composition-based stats. Identities = 50/174 (28%), Positives = 84/174 (48%), Gaps = 16/174 (9%) Query: 8 SIRRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENY-VADVEVDGRRVELALWDTA 66 K+V++GD GK+ LL F++ +F T+ + ++VDG+ ++ +WDTA Sbjct: 3 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTA 62 Query: 67 GQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVL-HFCQGVPIILVGCKVD 125 GQE Y R+ Y + L+ + I + ENV E+W+ E+ H + I+LVG K D Sbjct: 63 GQERYRRITSAYYRGAVGALLVYDIAKHLTYENV-ERWLKELRDHADSNIVIMLVGNKSD 121 Query: 126 LRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAA 179 LR+ + V + E ++ A++ + E SA V E F+ Sbjct: 122 LRH------------LRAVPTDEARAFAEK-NNLSFIETSALDSTNVEEAFKNI 162 >6O62-A nrPDB Length = 184 Score = 199 bits (506), Expect = 9e-52, Method: Composition-based stats. Identities = 47/171 (27%), Positives = 85/171 (49%), Gaps = 14/171 (8%) Query: 11 RKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENY-VADVEVDGRRVELALWDTAGQE 69 KL++VGD GK+CLL+ F + +F ++ T+ ++ + +E G+R++L +WDTAGQE Sbjct: 15 MKLLLVGDSGVGKSCLLLRFVEDKFNPSFITTIGIDFKIRTIESKGKRIKLQVWDTAGQE 74 Query: 70 DYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVPIILVGCKVDLRND 129 + + Y + +++ + + S ENV+ + H + I LVG K D Sbjct: 75 RFRTITTAYYRGAMGIVLIYDVTDSRSFENVENWFQTVTQHANEDAQIFLVGNKCD---- 130 Query: 130 PQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAAT 180 E + V+ ++GQ +A ++ + E SAK+ V +F Sbjct: 131 --------DEVNRQVSKEQGQELAAKLN-VPFLEASAKSNENVDSIFYELA 172 >2HEI-A nrPDB Length = 179 Score = 197 bits (502), Expect = 2e-51, Method: Composition-based stats. Identities = 52/175 (29%), Positives = 85/175 (48%), Gaps = 16/175 (9%) Query: 10 RRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVAD-VEVDGRRVELALWDTAGQ 68 + KLV++G+ A GK+ L++ F KGQF E T+ ++ V +D V+ +WDTAGQ Sbjct: 8 QFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQ 67 Query: 69 EDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFC-QGVPIILVGCKVDLR 127 E Y L P+ Y + ++ + I ++ + W+ E+ + I L G K DL Sbjct: 68 ERYHSLAPMYYRGAQAAIVVYDITNQETFARAKT-WVKELQRQASPSIVIALAGNKADLA 126 Query: 128 NDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRA 182 N ++ V +E Q+ AD + + E SAKT V ++F A + Sbjct: 127 N------------KRMVEYEEAQAYADD-NSLLFMETSAKTAMNVNDLFLAIAKK 168 >3DZ8-A nrPDB Length = 191 Score = 197 bits (501), Expect = 3e-51, Method: Composition-based stats. Identities = 55/187 (29%), Positives = 90/187 (48%), Gaps = 16/187 (8%) Query: 4 QVGNSIRRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENY-VADVEVDGRRVELAL 62 Q KL+I+G+ + GKT L ++ F +V TV ++ V V +RV+L + Sbjct: 17 QGNFDYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTVYRHEKRVKLQI 76 Query: 63 WDTAGQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFC-QGVPIILVG 121 WDTAGQE Y + Y + ++ + I +S VQ+ W ++ + +ILVG Sbjct: 77 WDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQD-WATQIKTYSWDNAQVILVG 135 Query: 122 CKVDLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATR 181 K D+ E ++ V +++GQ +A+Q+G ++E SAK VR+ FE Sbjct: 136 NKCDM------------EEERVVPTEKGQLLAEQLGF-DFFEASAKENISVRQAFERLVD 182 Query: 182 ASLMGKS 188 A S Sbjct: 183 AICDKMS 189 >2O52-A nrPDB Length = 200 Score = 197 bits (501), Expect = 3e-51, Method: Composition-based stats. Identities = 46/192 (23%), Positives = 79/192 (41%), Gaps = 16/192 (8%) Query: 7 NSIRRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENY-VADVEVDGRRVELALWDT 65 + K +++G GK+CLL F + +F + T+ + V V G+ V+L +WDT Sbjct: 22 SDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWDT 81 Query: 66 AGQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFC-QGVPIILVGCKV 124 AGQE + + Y + L+ + I ++ ++ W+ + + +IL G K Sbjct: 82 AGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAA-WLTDARTLASPNIVVILCGNKK 140 Query: 125 DLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRASL 184 DL + ++ VT E A + + E SA TG V E F R L Sbjct: 141 DL------------DPEREVTFLEASRFAQE-NELMFLETSALTGENVEEAFLKCARTIL 187 Query: 185 MGKSKTNGKAKK 196 ++ Sbjct: 188 NKIDSGELDPER 199 >4RKF-A nrPDB Length = 190 Score = 197 bits (500), Expect = 4e-51, Method: Composition-based stats. Identities = 51/189 (26%), Positives = 89/189 (47%), Gaps = 16/189 (8%) Query: 2 SQQVGNSIRRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENY-VADVEVDGRRVEL 60 + KL+I+G+ + GKT L ++ F +V TV ++ V V +RV+L Sbjct: 15 AADQNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRVKL 74 Query: 61 ALWDTAGQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFC-QGVPIIL 119 +WDTAG E Y + Y + ++ + + DS +VQ+ W+ ++ + +IL Sbjct: 75 QIWDTAGLERYRTITTAYYRGAMGFILMYDVTNEDSFNSVQD-WVTQIKTYSWDNAQVIL 133 Query: 120 VGCKVDLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAA 179 VG K D+ + Q+ ++ + G+ +ADQ+G ++E SAK V+ VFE Sbjct: 134 VGNKCDMED------------QRVISFERGRQLADQLG-VEFFETSAKENVNVKAVFERL 180 Query: 180 TRASLMGKS 188 S Sbjct: 181 VDIICDKMS 189 >4KYI-B nrPDB Length = 170 Score = 197 bits (500), Expect = 4e-51, Method: Composition-based stats. Identities = 55/182 (30%), Positives = 87/182 (47%), Gaps = 17/182 (9%) Query: 4 QVGNSI-RRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVAD-VEVDGRRVELA 61 +G+ I + KLV++G+ A GK+ L++ F KGQF E T+ ++ V +D V+ Sbjct: 2 AMGSKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFE 61 Query: 62 LWDTAGQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFC-QGVPIILV 120 +WDTAG E Y L P+ Y + ++ + I D+ + W+ E+ + I L Sbjct: 62 IWDTAGLERYHSLAPMYYRGAQAAIVVYDITNTDTFARAK-NWVKELQRQASPNIVIALA 120 Query: 121 GCKVDLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAAT 180 G K DL ++ V QE Q+ AD + + E SAKT V E+F A Sbjct: 121 GNKADLA------------SKRAVEFQEAQAYADD-NSLLFMETSAKTAMNVNEIFMAIA 167 Query: 181 RA 182 + Sbjct: 168 KK 169 >4KLZ-A nrPDB Length = 173 Score = 197 bits (500), Expect = 4e-51, Method: Composition-based stats. Identities = 52/183 (28%), Positives = 87/183 (47%), Gaps = 14/183 (7%) Query: 6 GNSIRRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDT 65 G+S KLV++G G GK+ + + F +FPE + PT+ + Y + +D L + DT Sbjct: 1 GSSREYKLVMLGAGGVGKSAMTMQFISHRFPEDHDPTIEDAYKIRIRIDDEPANLDILDT 60 Query: 66 AGQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQE-KWIAEVLHFCQGVPIILVGCKV 124 AGQ ++ +R +IC+SI S V+E K + + P++LVG K Sbjct: 61 AGQAEFTAMRDQYMRAGEGFIICYSITDRRSFHEVREFKQLIYRVRRTDDTPVVLVGNKS 120 Query: 125 DLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRASL 184 DL+ + VT +EG ++A + + ++E SA Y + +VF A R Sbjct: 121 DLK------------QLRQVTKEEGLALAREF-SCPFFETSAAYRYYIDDVFHALVREIR 167 Query: 185 MGK 187 + Sbjct: 168 RKE 170 >2REX-B nrPDB Length = 197 Score = 197 bits (500), Expect = 4e-51, Method: Composition-based stats. Identities = 82/187 (43%), Positives = 119/187 (63%), Gaps = 1/187 (0%) Query: 10 RRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDTAGQE 69 R KLV+VGD CGKT +L V +K +PE YVPTVFENY A +E + +RVEL+LWDT+G Sbjct: 10 RCKLVLVGDVQCGKTAMLQVLAKDCYPETYVPTVFENYTACLETEEQRVELSLWDTSGSP 69 Query: 70 DYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVPIILVGCKVDLRND 129 YD +RPL Y DS+ VL+CF I P+++++ +KW E+L +C ++L+GCK DLR D Sbjct: 70 YYDNVRPLCYSDSDAVLLCFDISRPETVDSALKKWRTEILDYCPSTRVLLIGCKTDLRTD 129 Query: 130 PQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGY-GVREVFEAATRASLMGKS 188 T+ +L + Q P++ ++G ++A Q+GA Y E SA T + +F A+ L S Sbjct: 130 LSTLMELSHQKQAPISYEQGCAIAKQLGAEIYLEGSAFTSEKSIHSIFRTASMLCLNKPS 189 Query: 189 KTNGKAK 195 K+ Sbjct: 190 PLPQKSP 196 >4RKE-A nrPDB Length = 176 Score = 196 bits (499), Expect = 5e-51, Method: Composition-based stats. Identities = 44/183 (24%), Positives = 85/183 (46%), Gaps = 14/183 (7%) Query: 2 SQQVGNSIRRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENY-VADVEVDGRRVEL 60 + + + K +I+GD GK+CLL+ F+ +F V+ T+ + + +DG++++L Sbjct: 2 AMGMSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKL 61 Query: 61 ALWDTAGQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVPIILV 120 +WDTAG E + + Y + L+ + I ++ ++ H + I+L+ Sbjct: 62 QIWDTAGLEAFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIMLI 121 Query: 121 GCKVDLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAAT 180 G K DL + ++ V +EG++ A + G + E SA+T V E F Sbjct: 122 GNKSDL------------DSRREVKKEEGEAFAREHGLV-FMETSARTAANVEEAFINTA 168 Query: 181 RAS 183 + Sbjct: 169 KEI 171 >3RAB-A nrPDB Length = 169 Score = 195 bits (497), Expect = 8e-51, Method: Composition-based stats. Identities = 46/178 (25%), Positives = 87/178 (48%), Gaps = 16/178 (8%) Query: 8 SIRRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENY-VADVEVDGRRVELALWDTA 66 K++I+G+ + GKT L ++ F +V TV ++ V + + +R++L +WDTA Sbjct: 3 DYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTA 62 Query: 67 GQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFC-QGVPIILVGCKVD 125 GQE Y + Y + ++ + I +S VQ+ W ++ + ++LVG K D Sbjct: 63 GQERYRTITTAYYRGAMGFILMYDITNEESFNAVQD-WSTQIKTYSWDNAQVLLVGNKCD 121 Query: 126 LRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRAS 183 + + ++ V+S+ G+ +AD +G ++E SAK V++ FE Sbjct: 122 MED------------ERVVSSERGRQLADHLGF-EFFEASAKDNINVKQTFERLVDVI 166 >2HUP-A nrPDB Length = 201 Score = 195 bits (497), Expect = 9e-51, Method: Composition-based stats. Identities = 53/181 (29%), Positives = 83/181 (45%), Gaps = 15/181 (8%) Query: 11 RKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENY-VADVEVDGRRVELALWDTAGQE 69 KLV+VGD + GKTC++ F G F E T+ ++ + +E+ G+RV+L +WDTAGQE Sbjct: 30 FKLVLVGDASVGKTCVVQRFKTGAFSERQGSTIGVDFTMKTLEIQGKRVKLQIWDTAGQE 89 Query: 70 DYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFC-QGVPIILVGCKVDLRN 128 + + Y +N ++ + I S +V WI +V + + +L+G K DL Sbjct: 90 RFRTITQSYYRSANGAILAYDITKRSSFLSVPH-WIEDVRKYAGSNIVQLLIGNKSDLSE 148 Query: 129 DPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRASLMGKS 188 + V+ E QS+A+ E SAK V E F +M Sbjct: 149 ------------LREVSLAEAQSLAEHYDILCAIETSAKDSSNVEEAFLRVATELIMRHG 196 Query: 189 K 189 Sbjct: 197 G 197 >4UJ4-A nrPDB Length = 185 Score = 195 bits (496), Expect = 1e-50, Method: Composition-based stats. Identities = 49/192 (25%), Positives = 86/192 (44%), Gaps = 16/192 (8%) Query: 8 SIRRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENY-VADVEVDGRRVELALWDTA 66 K+V++GD GK+ LL F++ +F T+ + ++VDG+ ++ +WDTA Sbjct: 8 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTA 67 Query: 67 GQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVL-HFCQGVPIILVGCKVD 125 G E Y + Y + L+ + I + ENV E+W+ E+ H + I+LVG K D Sbjct: 68 GLERYRAITSAYYRGAVGALLVYDIAKHLTYENV-ERWLKELRDHADSNIVIMLVGNKSD 126 Query: 126 LRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRASLM 185 LR+ + V + E ++ A++ G + E SA V F+ Sbjct: 127 LRH------------LRAVPTDEARAFAEKNG-LSFIETSALDSTNVEAAFQTILTEIYR 173 Query: 186 GKSKTNGKAKKN 197 S+ ++ Sbjct: 174 IVSQKQMSDRRE 185 >2BMD-A nrPDB Length = 186 Score = 195 bits (496), Expect = 1e-50, Method: Composition-based stats. Identities = 49/188 (26%), Positives = 78/188 (41%), Gaps = 16/188 (8%) Query: 11 RKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENY-VADVEVDGRRVELALWDTAGQE 69 K +++G+ GK+CLL F + +F + T+ + + V G+ V+L +WDTAGQE Sbjct: 11 FKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWDTAGQE 70 Query: 70 DYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFC-QGVPIILVGCKVDLRN 128 + + Y + L+ + I ++ N W+ + Q + IIL G K DL Sbjct: 71 RFRSVTRSYYRGAAGALLVYDITSRETY-NALTNWLTDARMLASQNIVIILCGNKKDLDA 129 Query: 129 DPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRASLMGKS 188 D + VT E A + + E SA TG V E F R L Sbjct: 130 D------------REVTFLEASRFAQE-NELMFLETSALTGENVEEAFVQCARKILNKIE 176 Query: 189 KTNGKAKK 196 ++ Sbjct: 177 SGELDPER 184 >6IYB-A nrPDB Length = 199 Score = 195 bits (495), Expect = 1e-50, Method: Composition-based stats. Identities = 46/197 (23%), Positives = 87/197 (44%), Gaps = 21/197 (10%) Query: 1 MSQQVGNSIRRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYV-ADVEVDGRRVE 59 M + K++I+GD GKT L+ + +F Y T+ +++ +V VD R V Sbjct: 4 MGSTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVT 63 Query: 60 LALWDTAGQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVL-----HFCQG 114 + +WDTAG E + Y ++ ++ F + P++ + + + W E L + Sbjct: 64 MQIWDTAGLERFQS-GVAFYRGADCCVLVFDVTAPNTFKTL-DSWRDEFLIQASPRDPEN 121 Query: 115 VPIILVGCKVDLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVRE 174 P +++G K+DL N + V ++ Q+ Y+E SAK V + Sbjct: 122 FPFVVLGNKIDLEN-------------RQVATKRAQAWCYSKNNIPYFETSAKEAINVEQ 168 Query: 175 VFEAATRASLMGKSKTN 191 F+ R +L +++ Sbjct: 169 AFQTIARNALKQETEVE 185 >2G6B-A nrPDB Length = 180 Score = 193 bits (492), Expect = 3e-50, Method: Composition-based stats. Identities = 57/187 (30%), Positives = 95/187 (50%), Gaps = 17/187 (9%) Query: 8 SIRRKLVIVGDGACGKTCLLIVFSKGQF-PEVYVPTVFENYVADV-EVDGRRVELALWDT 65 + K+++VGD GKTCLL+ F G F ++ TV ++ V +VDG +V+L +WDT Sbjct: 8 DVAFKVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVLDVDGVKVKLQMWDT 67 Query: 66 AGQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQ-GVPIILVGCKV 124 AGQE + + Y D++ +L+ + + S +N+Q W+ E+ + Q V ++L+G KV Sbjct: 68 AGQERFRSVTHAYYRDAHALLLLYDVTNKASFDNIQA-WLTEIHEYAQHDVALMLLGNKV 126 Query: 125 DLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRASL 184 D ++ V ++G+ +A + G + E SAKTG V F A + Sbjct: 127 D------------SAHERVVKREDGEKLAKEYG-LPFMETSAKTGLNVDLAFTAIAKELK 173 Query: 185 MGKSKTN 191 K Sbjct: 174 RRSMKAP 180 >2FG5-A nrPDB Length = 192 Score = 193 bits (491), Expect = 4e-50, Method: Composition-based stats. Identities = 48/181 (26%), Positives = 85/181 (46%), Gaps = 17/181 (9%) Query: 6 GNSIR-RKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYV-ADVEVDGRRVELALW 63 G++IR K+ ++GD GK+ ++ F + F PT+ +++ V + +W Sbjct: 18 GSAIRELKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIW 77 Query: 64 DTAGQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVL-HFCQGVPIILVGC 122 DTAGQE + L P+ Y S +I + I DS ++ KW+ E+ H + + + + G Sbjct: 78 DTAGQERFHSLAPMYYRGSAAAVIVYDITKQDSFYTLK-KWVKELKEHGPENIVMAIAGN 136 Query: 123 KVDLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRA 182 K DL + + V ++ + A+ IGA E SAK + E+F+ +R Sbjct: 137 KCDLSDI------------REVPLKDAKEYAESIGAIV-VETSAKNAINIEELFQGISRQ 183 Query: 183 S 183 Sbjct: 184 I 184 >5XR6-A nrPDB Length = 194 Score = 193 bits (490), Expect = 5e-50, Method: Composition-based stats. Identities = 47/186 (25%), Positives = 82/186 (44%), Gaps = 16/186 (8%) Query: 8 SIRRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENY-VADVEVDGRRVELALWDTA 66 KLV++GD GK+ LL F+K +F T+ + +V+G+ V+ +WDTA Sbjct: 23 DYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTTKVEGKVVKAQIWDTA 82 Query: 67 GQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVL-HFCQGVPIILVGCKVD 125 GQE Y + Y + L+ + + + EN +W+ E+ H + ++L+G K D Sbjct: 83 GQERYRAITSAYYRGAVGALLIYDVTRHATFENAA-RWLRELRGHTDPNIVVMLIGNKCD 141 Query: 126 LRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRASLM 185 LR+ V ++E ++ A++ + + E SA V F Sbjct: 142 LRHLVA------------VKTEEAKAFAERE-SLYFMETSALDATNVENAFTEVLTQIHK 188 Query: 186 GKSKTN 191 SK + Sbjct: 189 IVSKRS 194 >3CPJ-B nrPDB Length = 223 Score = 192 bits (489), Expect = 7e-50, Method: Composition-based stats. Identities = 49/186 (26%), Positives = 82/186 (44%), Gaps = 16/186 (8%) Query: 8 SIRRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENY-VADVEVDGRRVELALWDTA 66 + K+V++GD GK+ LL F+K +F T+ + +E++G+R++ +WDTA Sbjct: 11 DLLFKIVLIGDSGVGKSNLLSRFTKNEFNMDSKSTIGVEFATRTLEIEGKRIKAQIWDTA 70 Query: 67 GQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFC-QGVPIILVGCKVD 125 GQE Y + Y + LI + I S EN W++E+ V + L+G K D Sbjct: 71 GQERYRAITSAYYRGAVGALIVYDISKSSSYENCNH-WLSELRENADDNVAVGLIGNKSD 129 Query: 126 LRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRASLM 185 L + + V ++E ++ A + + E SA V + FE Sbjct: 130 LAH------------LRAVPTEESKTFAQE-NQLLFTETSALNSENVDKAFEELINTIYQ 176 Query: 186 GKSKTN 191 SK Sbjct: 177 KVSKHQ 182 >1X3S-A nrPDB Length = 195 Score = 192 bits (489), Expect = 7e-50, Method: Composition-based stats. Identities = 50/180 (27%), Positives = 85/180 (47%), Gaps = 18/180 (10%) Query: 12 KLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENY-VADVEVDGRRVELALWDTAGQED 70 K++I+G+ GK+ LL+ F+ F T+ ++ V + VDG + +LA+WDTAGQE Sbjct: 17 KILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQER 76 Query: 71 YDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFC--QGVPIILVGCKVDLRN 128 + L P Y + V++ + + D+ + + W+ E+ +C + +LVG K+D N Sbjct: 77 FRTLTPSYYRGAQGVILVYDVTRRDTFVKL-DNWLNELETYCTRNDIVNMLVGNKIDKEN 135 Query: 129 DPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRASLMGKS 188 + V EG A + + + E SAKT GV+ FE + Sbjct: 136 -------------REVDRNEGLKFARKH-SMLFIEASAKTCDGVQCAFEELVEKIIQTPG 181 >1EK0-A nrPDB Length = 170 Score = 192 bits (488), Expect = 1e-49, Method: Composition-based stats. Identities = 51/173 (29%), Positives = 90/173 (52%), Gaps = 13/173 (7%) Query: 9 IRRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVAD-VEVDGRRVELALWDTAG 67 KLV++G+ A GK+ +++ F F E PT+ ++ V ++ V+ +WDTAG Sbjct: 2 TSIKLVLLGEAAVGKSSIVLRFVSNDFAENKEPTIGAAFLTQRVTINEHTVKFEIWDTAG 61 Query: 68 QEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQ-GVPIILVGCKVDL 126 QE + L P+ Y ++ L+ + + P S + W+ E+ + I LVG K+D+ Sbjct: 62 QERFASLAPMYYRNAQAALVVYDVTKPQSFIKARH-WVKELHEQASKDIIIALVGNKIDM 120 Query: 127 RNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAA 179 L++ G++ V +EG+ +A++ G ++E SAKTG V +VF Sbjct: 121 ---------LQEGGERKVAREEGEKLAEEKGLL-FFETSAKTGENVNDVFLGI 163 >4PHF-A nrPDB Length = 184 Score = 191 bits (486), Expect = 2e-49, Method: Composition-based stats. Identities = 47/185 (25%), Positives = 86/185 (46%), Gaps = 19/185 (10%) Query: 12 KLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYV-ADVEVDGRRV-ELALWDTAGQE 69 K++I+GD GKT L+ + ++ Y T+ +++ +V VDG +V + +WDTAGQE Sbjct: 12 KVIILGDSGVGKTSLMHRYVNDKYSCQYKATIGADFLTKEVTVDGDKVATMQVWDTAGQE 71 Query: 70 DYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFC-----QGVPIILVGCKV 124 + L Y ++ ++ + + S EN++ W E L + P +++G K+ Sbjct: 72 RFQSLGVAFYRGADCCVLVYDVTNASSFENIKS-WRDEFLVHANVNSPETFPFVILGNKI 130 Query: 125 DLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRASL 184 D +E ++ V+ + Q +A +G + SAK V FE R++L Sbjct: 131 D-----------AEESKKIVSEKSAQELAKSLGDIPLFLTSAKNAINVDTAFEEIARSAL 179 Query: 185 MGKSK 189 Sbjct: 180 QQNQA 184 >5UB8-A nrPDB Length = 222 Score = 191 bits (485), Expect = 2e-49, Method: Composition-based stats. Identities = 48/178 (26%), Positives = 81/178 (45%), Gaps = 16/178 (8%) Query: 8 SIRRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENY-VADVEVDGRRVELALWDTA 66 K+V++GD GK+ LL F++ +F T+ + +E+DG+RV+ +WDTA Sbjct: 13 EYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGKRVKAQIWDTA 72 Query: 67 GQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQ-GVPIILVGCKVD 125 GQE Y + Y + LI + I +S E+V +W+ E+ + I LVG K D Sbjct: 73 GQERYRAITSAYYRGAVGALIVYDIAKTESYESVS-RWLKELKEHADANIIIELVGNKSD 131 Query: 126 LRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRAS 183 L + + V ++E ++ A + + E SA + V F + Sbjct: 132 LDH------------LRAVPTEEAKNFAMENNLL-FTEASALSSDNVDLSFHQLLKNI 176 >5YOZ-A nrPDB Length = 177 Score = 189 bits (481), Expect = 6e-49, Method: Composition-based stats. Identities = 49/179 (27%), Positives = 87/179 (48%), Gaps = 15/179 (8%) Query: 4 QVGNSIRRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYV-ADVEVDGRRVELAL 62 Q+ + K+V++G+ GK+ + + F++ +F T+ ++ V +DGR ++ + Sbjct: 9 QLMEATSAKIVMLGESGAGKSSIALRFTRNEFLANQETTIGAAFLSKTVMIDGRALKYEI 68 Query: 63 WDTAGQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQ-GVPIILVG 121 WDTAG E + L P+ Y ++ L+ + I +SL+ Q WI E+ + I+LVG Sbjct: 69 WDTAGLERFRSLAPIYYRGASGALVVYDITNSESLKKAQT-WIKELRANADPSLIIVLVG 127 Query: 122 CKVDLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAAT 180 K DL + V+ ++GQ +A + +YE SAK V +VF Sbjct: 128 NKKDL------------GSLRQVSFEDGQRLAAEEQLAAFYEASAKDNNNVEQVFLDLA 174 >2IL1-A nrPDB Length = 192 Score = 188 bits (479), Expect = 1e-48, Method: Composition-based stats. Identities = 46/180 (25%), Positives = 88/180 (48%), Gaps = 15/180 (8%) Query: 10 RRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENY-VADVEVDGRRVELALWDTAGQ 68 + +++I+G GKT L+ F+ F E TV ++ + VE+ G+++ L +WDTAGQ Sbjct: 26 KLQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRGKKIRLQIWDTAGQ 85 Query: 69 EDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFC-QGVPIILVGCKVDLR 127 E ++ + Y + +++ + I ++ +++ KW+ + + + ++LVG K+D Sbjct: 86 ERFNSITSAYYRSAKGIILVYDITKKETFDDLP-KWMKMIDKYASEDAELLLVGNKLDCE 144 Query: 128 NDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRASLMGK 187 D + +T Q+G+ A QI + E SAK + V E+F L Sbjct: 145 TD------------REITRQQGEKFAQQITGMRFCEASAKDNFNVDEIFLKLVDDILKKM 192 >2F7S-A nrPDB Length = 217 Score = 188 bits (479), Expect = 1e-48, Method: Composition-based stats. Identities = 52/201 (25%), Positives = 89/201 (44%), Gaps = 27/201 (13%) Query: 8 SIRRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEV------DGR----- 56 KL+ +GD GKT L ++ +F ++ TV ++ V +G Sbjct: 23 DYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAF 82 Query: 57 RVELALWDTAGQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVL--HFCQG 114 +V L LWDTAGQE + L + D+ L+ F + S NV+ W++++ +C+ Sbjct: 83 KVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVR-NWMSQLQANAYCEN 141 Query: 115 VPIILVGCKVDLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVRE 174 I+L+G K DL + Q+ V ++ + +AD+ G Y+E SA TG V + Sbjct: 142 PDIVLIGNKADLPD------------QREVNERQARELADKYG-IPYFETSAATGQNVEK 188 Query: 175 VFEAATRASLMGKSKTNGKAK 195 E + + K + Sbjct: 189 AVETLLDLIMKRMEQCVEKTQ 209 >3REG-A nrPDB Length = 194 Score = 188 bits (478), Expect = 1e-48, Method: Composition-based stats. Identities = 82/176 (46%), Positives = 106/176 (60%), Gaps = 10/176 (5%) Query: 12 KLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDTAGQEDY 71 K+V+VGDGA GKTCLL+ FSKG+ P YVPTVFEN+ ++ L LWDTAGQE+Y Sbjct: 25 KIVVVGDGAVGKTCLLLAFSKGEIPTAYVPTVFENFSHVMKYKNEEFILHLWDTAGQEEY 84 Query: 72 DRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVPIILVGCKVDLRNDPQ 131 DRLRPLSY DS+VVL+CF+++ S +N+ KW E+ H+ +LVG KVDLR D Sbjct: 85 DRLRPLSYADSDVVLLCFAVNNRTSFDNISTKWEPEIKHYIDTAKTVLVGLKVDLRKD-- 142 Query: 132 TIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRASLMGK 187 G VT QEG + ++G Y E S+ G+ EVFE + K Sbjct: 143 --------GSDDVTKQEGDDLCQKLGCVAYIEASSVAKIGLNEVFEKSVDCIFSNK 190 >2FFQ-A nrPDB Length = 171 Score = 188 bits (477), Expect = 2e-48, Method: Composition-based stats. Identities = 57/177 (32%), Positives = 90/177 (50%), Gaps = 16/177 (9%) Query: 10 RRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYV-ADVEVDGRRVELALWDTAGQ 68 + KLV +G+ + GKT L+ F F Y T+ +++ + ++ R V L LWDTAGQ Sbjct: 2 KFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 61 Query: 69 EDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVL-HFCQGVPIILVGCKVDLR 127 E + L P DS V ++ + I +S + KWI +V V I+LVG K DL Sbjct: 62 ERFRSLIPSYIRDSTVAVVVYDITNLNSFQQTS-KWIDDVRTERGSDVIIMLVGNKTDLA 120 Query: 128 NDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRASL 184 + ++ +T +EG+ A ++ + + E SAKTGY V+++F A L Sbjct: 121 D------------KRQITIEEGEQRAKEL-SVMFIETSAKTGYNVKQLFRRVASALL 164 >2EW1-A nrPDB Length = 201 Score = 187 bits (475), Expect = 3e-48, Method: Composition-based stats. Identities = 48/172 (27%), Positives = 85/172 (49%), Gaps = 16/172 (9%) Query: 11 RKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYV-ADVEVDGRRVELALWDTAGQE 69 K+V++G+ GKTCL+ F++G FP T+ +++ VE++G +V+L +WDTAGQE Sbjct: 27 FKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWDTAGQE 86 Query: 70 DYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQG-VPIILVGCKVDLRN 128 + + Y +N +++ + I +S + E W+ E+ + V +LVG K+DL Sbjct: 87 RFRSITQSYYRSANALILTYDITCEESFRCLPE-WLREIEQYASNKVITVLVGNKIDLAE 145 Query: 129 DPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAAT 180 ++ V+ Q + + Y E SAK V ++F Sbjct: 146 ------------RREVSQQRAEEF-SEAQDMYYLETSAKESDNVEKLFLDLA 184 >1YVD-A nrPDB Length = 169 Score = 187 bits (474), Expect = 4e-48, Method: Composition-based stats. Identities = 43/180 (23%), Positives = 80/180 (44%), Gaps = 16/180 (8%) Query: 6 GNSIRRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYV-ADVEVDGRRVELALWD 64 G+ K+ ++GD GK+ ++ F + F PT+ +++ V+ + +WD Sbjct: 1 GSLRELKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWD 60 Query: 65 TAGQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVL-HFCQGVPIILVGCK 123 TAGQE + L P+ Y S +I + I ++ ++ W+ E+ H + + + G K Sbjct: 61 TAGQERFRALAPMYYRGSAAAIIVYDITKEETFSTLK-NWVRELRQHGPPSIVVAIAGNK 119 Query: 124 VDLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRAS 183 DL + + V ++ + AD I A + E SAK + E+F +R Sbjct: 120 CDLTDV------------REVMERDAKDYADSIHAI-FVETSAKNAININELFIEISRRI 166 >1D5C-A nrPDB Length = 162 Score = 186 bits (473), Expect = 5e-48, Method: Composition-based stats. Identities = 55/173 (31%), Positives = 84/173 (48%), Gaps = 16/173 (9%) Query: 10 RRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYV-ADVEVDGRRVELALWDTAGQ 68 + KLV +G+ A GKT ++ F F Y T+ +++ + +D V L LWDTAGQ Sbjct: 1 KYKLVFLGEQAVGKTSIITRFMYDTFDNNYQSTIGIDFLSKTLYLDEGPVRLQLWDTAGQ 60 Query: 69 EDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVL-HFCQGVPIILVGCKVDLR 127 E + L P DS ++ + I S EN KWI ++L + V I LVG K DL Sbjct: 61 ERFRSLIPSYIRDSAAAIVVYDITNRQSFENT-TKWIQDILNERGKDVIIALVGNKTDLG 119 Query: 128 NDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAAT 180 + + VT +EG A + T ++E SAK G+ ++ +F+ Sbjct: 120 D------------LRKVTYEEGMQKAQEYN-TMFHETSAKAGHNIKVLFKKTA 159 >2ATV-A nrPDB Length = 196 Score = 185 bits (471), Expect = 8e-48, Method: Composition-based stats. Identities = 54/187 (28%), Positives = 84/187 (44%), Gaps = 16/187 (8%) Query: 3 QQVGNSIRRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELAL 62 Q + S KL I G GK+ L++ F +F Y PT+ Y +D V + + Sbjct: 21 QSMAKSAEVKLAIFGRAGVGKSALVVRFLTKRFIWEYDPTLESTYRHQATIDDEVVSMEI 80 Query: 63 WDTAGQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQE-KWIAEVLHFCQGVPIILVG 121 DTAGQED + R ++ + I S E V K I + + + V +ILVG Sbjct: 81 LDTAGQEDTIQ-REGHMRWGEGFVLVYDITDRGSFEEVLPLKNILDEIKKPKNVTLILVG 139 Query: 122 CKVDLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGY-GVREVFEAAT 180 K DL + + V+++EG+ +A ++ A +YECSA TG + E+F Sbjct: 140 NKADLDHS------------RQVSTEEGEKLATEL-ACAFYECSACTGEGNITEIFYELC 186 Query: 181 RASLMGK 187 R + Sbjct: 187 REVRRRR 193 >6HUF-A nrPDB Length = 182 Score = 185 bits (471), Expect = 9e-48, Method: Composition-based stats. Identities = 46/190 (24%), Positives = 88/190 (46%), Gaps = 17/190 (8%) Query: 8 SIRRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYV-ADVEVDGRRVELALWDTA 66 K + +GD GKT +L ++ G+F ++ TV ++ + + +R++L LWDTA Sbjct: 7 DYLIKFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKTIYRNDKRIKLQLWDTA 66 Query: 67 GQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVL--HFCQGVPIILVGCKV 124 G E + L + D+ L+ F + +S NV+ WI+++ + + I+L G K Sbjct: 67 GLERFRSLTTAFFRDAMGFLLLFDLTNEESFLNVR-NWISQLKTHAYSENPDIVLCGNKS 125 Query: 125 DLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRASL 184 DL + ++ V + E + +A+ G Y+E SA G + + E + Sbjct: 126 DLED------------ERVVAAAEARQLAEHYG-IPYFETSAANGTNISQAIEMLLDLIM 172 Query: 185 MGKSKTNGKA 194 ++ K+ Sbjct: 173 KRMERSVDKS 182 >3BFK-A nrPDB Length = 181 Score = 185 bits (469), Expect = 2e-47, Method: Composition-based stats. Identities = 43/187 (22%), Positives = 78/187 (41%), Gaps = 17/187 (9%) Query: 8 SIRRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENY-VADVEV-DGRRVELALWDT 65 K+V++GD GK+ LL F++ +F T+ + +++ + + ++ +WDT Sbjct: 5 DYLFKIVLIGDSGVGKSNLLSRFTRDEFNLESKSTIGVEFATKSIQLKNNKIIKAQIWDT 64 Query: 66 AGQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQ-GVPIILVGCKV 124 AGQE Y + Y + L+ + I +S EN+ EKW+ E+ + I+LVG K Sbjct: 65 AGQERYRAITSAYYRGAVGALLVYDITKKNSFENI-EKWLKELRDNADSNIVILLVGNKS 123 Query: 125 DLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRASL 184 DL++ + + + A + + E SA V F Sbjct: 124 DLKH------------LRVINDNDATQYAKKEK-LAFIETSALEATNVELAFHQLLNEIY 170 Query: 185 MGKSKTN 191 + K Sbjct: 171 NVRQKKQ 177 >2KE5-A nrPDB Length = 174 Score = 184 bits (467), Expect = 2e-47, Method: Composition-based stats. Identities = 58/184 (31%), Positives = 86/184 (46%), Gaps = 15/184 (8%) Query: 11 RKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDTAGQED 70 K+++VG G GK+ L + F +F E Y PT ++Y V +DG V++ + DTAG ED Sbjct: 4 HKVIMVGSGGVGKSALTLQFMYDEFVEDYEPTKADSYRKKVVLDGEEVQIDILDTAGLED 63 Query: 71 YDRLRPLSYPDSNVVLICFSIDLPDSLENVQE--KWIAEVLHFCQGVPIILVGCKVDLRN 128 Y +R + L+ FSI +S E + I V +P+++VG K DL Sbjct: 64 YAAIRDNYFRSGEGFLLVFSITEHESFTATAEFREQILRVKAEEDKIPLLVVGNKSDL-- 121 Query: 129 DPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRASLMGKS 188 E ++ V +E +S A++ G Y E SAKT V +VF R K Sbjct: 122 ----------EERRQVPVEEARSKAEEWG-VQYVETSAKTRANVDKVFFDLMREIRTKKM 170 Query: 189 KTNG 192 N Sbjct: 171 SENK 174 >2GIL-A nrPDB Length = 162 Score = 184 bits (467), Expect = 2e-47, Method: Composition-based stats. Identities = 55/175 (31%), Positives = 87/175 (49%), Gaps = 16/175 (9%) Query: 10 RRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYV-ADVEVDGRRVELALWDTAGQ 68 + KLV +G+ + GKT L+ F F Y T+ +++ + ++ R V L LWDTAGQ Sbjct: 1 KFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 60 Query: 69 EDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVL-HFCQGVPIILVGCKVDLR 127 E + L P DS V ++ + I +S + KWI +V V I+LVG K DL Sbjct: 61 ERFRSLIPSYIRDSTVAVVVYDITNVNSFQQT-TKWIDDVRTERGSDVIIMLVGNKTDLA 119 Query: 128 NDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRA 182 + ++ V+ +EG+ A ++ + E SAK GY V+++F A Sbjct: 120 D------------KRQVSIEEGERKAKELNVM-FIETSAKAGYNVKQLFRRVAAA 161 >3BC1-A nrPDB Length = 195 Score = 184 bits (467), Expect = 2e-47, Method: Composition-based stats. Identities = 49/200 (24%), Positives = 86/200 (43%), Gaps = 27/200 (13%) Query: 8 SIRRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEV-----------DGR 56 K + +GD GKT +L ++ G+F ++ TV ++ V G+ Sbjct: 9 DYLIKFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKRVVYRANGPDGAVGRGQ 68 Query: 57 RVELALWDTAGQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVL--HFCQG 114 R+ L LWDTAG E + L + D+ L+ F + S NV+ WI+++ + + Sbjct: 69 RIHLQLWDTAGLERFRSLTTAFFRDAMGFLLLFDLTNEQSFLNVR-NWISQLQMHAYSEN 127 Query: 115 VPIILVGCKVDLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVRE 174 I+L G K DL + Q+ V +E + +A++ G Y+E SA G + Sbjct: 128 PDIVLCGNKSDLED------------QRAVKEEEARELAEKYG-IPYFETSAANGTNISH 174 Query: 175 VFEAATRASLMGKSKTNGKA 194 E + ++ K+ Sbjct: 175 AIEMLLDLIMKRMERSVDKS 194 >1ZC4-A nrPDB Length = 175 Score = 184 bits (467), Expect = 3e-47, Method: Composition-based stats. Identities = 55/179 (30%), Positives = 85/179 (47%), Gaps = 16/179 (8%) Query: 11 RKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDTAGQED 70 K+++VG G GK+ L + F +F E Y PT ++Y V +DG V++ + DTAG ED Sbjct: 7 HKVIMVGSGGVGKSALTLQFMYDEFVEDYEPTKADSYRKKVVLDGEEVQIDILDTAGLED 66 Query: 71 YDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFC--QGVPIILVGCKVDLRN 128 Y +R + L FSI +S + + ++L + VP +LVG K DL + Sbjct: 67 YAAIRDNYFRSGEGFLCVFSITEMESFAATAD-FREQILRVKEDENVPFLLVGNKSDLED 125 Query: 129 DPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRASLMGK 187 ++ V+ +E ++ A+Q Y E SAKT V +VF R K Sbjct: 126 ------------KRQVSVEEAKNRAEQWN-VNYVETSAKTRANVDKVFFDLMREIRARK 171 >3RWM-B nrPDB Length = 185 Score = 184 bits (467), Expect = 3e-47, Method: Composition-based stats. Identities = 46/186 (24%), Positives = 76/186 (40%), Gaps = 16/186 (8%) Query: 8 SIRRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENY-VADVEVDGRRVELALWDTA 66 K+V++GD GK+ LL F+ +F T+ + +EV+ ++++ +WDTA Sbjct: 8 DYLFKIVLIGDSGVGKSNLLSRFTTDEFNIESKSTIGVEFATRTIEVENKKIKAQIWDTA 67 Query: 67 GQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFC-QGVPIILVGCKVD 125 G E Y + Y + LI + I S EN W+ E+ V + L+G K D Sbjct: 68 GLERYRAITSAYYRGAVGALIVYDISKSSSYENCNH-WLTELRENADDNVAVGLIGNKSD 126 Query: 126 LRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRASLM 185 L + + V + E ++ A + + E SA V + F A Sbjct: 127 LAH------------LRAVPTDEAKNFAME-NQMLFTETSALNSDNVDKAFRELIVAIFQ 173 Query: 186 GKSKTN 191 SK Sbjct: 174 MVSKHQ 179 >2IEZ-A nrPDB Length = 220 Score = 184 bits (467), Expect = 3e-47, Method: Composition-based stats. Identities = 52/207 (25%), Positives = 88/207 (42%), Gaps = 28/207 (13%) Query: 8 SIRRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEV------DGR----- 56 KL+ +GD GKT L ++ +F ++ TV ++ V DG Sbjct: 9 DYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYDTQGADGASGKAF 68 Query: 57 RVELALWDTAGQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVL--HFCQG 114 +V L LWDTAG E + L + D+ L+ F + S NV+ W++++ +C+ Sbjct: 69 KVHLQLWDTAGLERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVR-NWMSQLQANAYCEN 127 Query: 115 VPIILVGCKVDLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVRE 174 I+L+G K DL + Q+ V ++ + +A++ G Y+E SA TG V + Sbjct: 128 PDIVLIGNKADLPD------------QREVNERQARELAEKYG-IPYFETSAATGQNVEK 174 Query: 175 VFEAATRASLMGKSK-TNGKAKKNTTE 200 E + K +T Sbjct: 175 SVETLLDLIMKRMEKCVEKTQVPDTVN 201 >2IEY-A nrPDB Length = 195 Score = 183 bits (465), Expect = 4e-47, Method: Composition-based stats. Identities = 52/201 (25%), Positives = 88/201 (43%), Gaps = 27/201 (13%) Query: 8 SIRRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEV------DGR----- 56 KL+ +GD GKT L ++ +F ++ TV ++ V DG Sbjct: 9 DYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYDTQGADGASGKAF 68 Query: 57 RVELALWDTAGQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVL--HFCQG 114 +V L LWDTAG E + L + D+ L+ F + S NV+ W++++ +C+ Sbjct: 69 KVHLQLWDTAGLERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVR-NWMSQLQANAYCEN 127 Query: 115 VPIILVGCKVDLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVRE 174 I+L+G K DL + Q+ V ++ + +A++ G Y+E SA TG V + Sbjct: 128 PDIVLIGNKADLPD------------QREVNERQARELAEKYG-IPYFETSAATGQNVEK 174 Query: 175 VFEAATRASLMGKSKTNGKAK 195 E + K K + Sbjct: 175 SVETLLDLIMKRMEKCVEKTQ 195 >1YZU-A nrPDB Length = 170 Score = 183 bits (465), Expect = 5e-47, Method: Composition-based stats. Identities = 54/182 (29%), Positives = 99/182 (54%), Gaps = 16/182 (8%) Query: 5 VGNSIRRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYV-ADVEVDGRRVELALW 63 + K+V++G+G GKT L++ + + +F + ++ T+ +++ + + G+RV LA+W Sbjct: 1 GSRAYSFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIW 60 Query: 64 DTAGQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQG-VPIILVGC 122 DTAGQE + L P+ Y DSN ++ + I DS + V+ W+ E+ + + +VG Sbjct: 61 DTAGQERFHALGPIYYRDSNGAILVYDITDEDSFQKVK-NWVKELRKMLGNEICLCIVGN 119 Query: 123 KVDLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRA 182 K+DL E ++ V+ QE +S A+ +GA +Y SAK G+ E+F + Sbjct: 120 KIDL------------EKERHVSIQEAESYAESVGA-KHYHTSAKQNKGIEELFLDLCKR 166 Query: 183 SL 184 + Sbjct: 167 MI 168 >1Z06-A nrPDB Length = 189 Score = 183 bits (464), Expect = 7e-47, Method: Composition-based stats. Identities = 52/184 (28%), Positives = 81/184 (44%), Gaps = 21/184 (11%) Query: 4 QVGNSIRRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVAD-VEVDGRRVELAL 62 + S K++++GD GKTCL F G+FP+ T+ ++ V++DG R+++ L Sbjct: 14 RGSRSRIFKIIVIGDSNVGKTCLTYRFCAGRFPDRTEATIGVDFRERAVDIDGERIKIQL 73 Query: 63 WDTAGQEDYD-RLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHF--CQGVPIIL 119 WDTAGQE + + Y + + V+ + + S ++ WI E +P IL Sbjct: 74 WDTAGQERFRKSMVQHYYRNVHAVVFVYDMTNMASFHSLPA-WIEECKQHLLANDIPRIL 132 Query: 120 VGCKVDLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAK---TGYGVREVF 176 VG K DLR+ Q V + Q AD + E SAK V +F Sbjct: 133 VGNKCDLRSAIQ------------VPTDLAQKFADTHSMPLF-ETSAKNPNDNDHVEAIF 179 Query: 177 EAAT 180 Sbjct: 180 MTLA 183 >2G77-B nrPDB Length = 198 Score = 182 bits (463), Expect = 7e-47, Method: Composition-based stats. Identities = 51/177 (28%), Positives = 79/177 (44%), Gaps = 21/177 (11%) Query: 11 RKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVAD-VEVDGRRVELALWDTAGQE 69 K++++GD GKTCL F G+FP+ T+ ++ V++DG R+++ LWDTAGQE Sbjct: 30 FKIIVIGDSNVGKTCLTYRFCAGRFPDRTEATIGVDFRERAVDIDGERIKIQLWDTAGQE 89 Query: 70 DYD-RLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHF--CQGVPIILVGCKVDL 126 + + Y + + V+ + + S ++ WI E +P ILVG K DL Sbjct: 90 RFRKSMVQHYYRNVHAVVFVYDMTNMASFHSLPA-WIEECKQHLLANDIPRILVGNKCDL 148 Query: 127 RNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAK---TGYGVREVFEAAT 180 R+ Q V + Q AD + E SAK V +F Sbjct: 149 RSAIQ------------VPTDLAQKFADTHSMPLF-ETSAKNPNDNDHVEAIFMTLA 192 >2ERX-A nrPDB Length = 172 Score = 182 bits (463), Expect = 8e-47, Method: Composition-based stats. Identities = 47/171 (27%), Positives = 81/171 (47%), Gaps = 15/171 (8%) Query: 11 RKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDTAGQED 70 ++ + G G GK+ L++ F KG F E Y+PTV + Y + D L + DT G Sbjct: 4 YRVAVFGAGGVGKSSLVLRFVKGTFRESYIPTVEDTYRQVISCDKSICTLQITDTTGSHQ 63 Query: 71 YDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKW--IAEVLHFCQGVPIILVGCKVDLRN 128 + ++ LS + ++ +SI SLE ++ + I E+ + +PI+LVG K D Sbjct: 64 FPAMQRLSISKGHAFILVYSITSRQSLEELKPIYEQICEIKGDVESIPIMLVGNKCD--- 120 Query: 129 DPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAA 179 + + V S E +++A + E SAK + V+E+F+ Sbjct: 121 ---------ESPSREVQSSEAEALARTWK-CAFMETSAKLNHNVKELFQEL 161 >4KU4-A nrPDB Length = 206 Score = 182 bits (462), Expect = 1e-46, Method: Composition-based stats. Identities = 56/213 (26%), Positives = 90/213 (42%), Gaps = 32/213 (15%) Query: 3 QQVGNSIRRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELAL 62 I K+ ++G+G GKT L + +K F E Y PT+ ++Y +DG L + Sbjct: 7 SPGAGKITDKIAMLGEGGVGKTSLTVNLTKHVFSETYDPTLEDSYRRQCVIDGIPSHLEI 66 Query: 63 WDTAGQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVL------------- 109 DTAGQE+Y LR + + +I F + S E + + + Sbjct: 67 LDTAGQEEYGALREQWIRQNELFVIVFDVTRRSSFEAAERLFEEVIQTKRKLDETRRHPG 126 Query: 110 -HFCQGVP-----IILVGCKVDLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYE 163 +P ++LVG K DL ++ V + EG S+A ++G G+ E Sbjct: 127 DRHPDDLPFAPSLVVLVGNKCDLDT------------RREVGTLEGSSLAKKLG-CGFVE 173 Query: 164 CSAKTGYGVREVFEAATRASLMGKSKTNGKAKK 196 SAK G V E F + RA K + + ++ Sbjct: 174 TSAKLGTNVEEAFFSVVRADRRRKREVTDEEQR 206 >3TSO-A nrPDB Length = 178 Score = 182 bits (462), Expect = 1e-46, Method: Composition-based stats. Identities = 45/181 (24%), Positives = 76/181 (41%), Gaps = 16/181 (8%) Query: 11 RKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENY-VADVEVDGRRVELALWDTAGQE 69 K+V++G+ GKT LL F++ +F T+ + V + V+ +WDTAG E Sbjct: 11 FKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTAGLE 70 Query: 70 DYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQ-GVPIILVGCKVDLRN 128 Y + Y + L+ F + + V E+W+ E+ + + ++LVG K DL Sbjct: 71 RYRAITSAYYRGAVGALLVFDLTKHQTYAVV-ERWLKELYDHAEATIVVMLVGNKSDLS- 128 Query: 129 DPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRASLMGKS 188 + V ++E + A+ G + E SA V FE + S Sbjct: 129 -----------QAREVPTEEARMFAENNGLL-FLETSALDSTNVELAFETVLKEIFAKVS 176 Query: 189 K 189 K Sbjct: 177 K 177 >4WA7-A nrPDB Length = 170 Score = 181 bits (459), Expect = 2e-46, Method: Composition-based stats. Identities = 47/168 (27%), Positives = 74/168 (44%), Gaps = 15/168 (8%) Query: 23 KTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDTAGQEDYDRLRPLSYPDS 82 K+ L I + F + Y PT+ ++Y V +DG L + DTAG E+Y +R Sbjct: 17 KSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGLEEYSAMRDQYMRTG 76 Query: 83 NVVLICFSIDLPDSLENVQEKWIA-EVLHFCQGVPIILVGCKVDLRNDPQTIEQLRQEGQ 141 L F+I+ S E++ + + + VP++LVG K DL + Sbjct: 77 EGFLCVFAINNTKSFEDIHHYREQIKRVKDSEDVPMVLVGNKCDLPS------------- 123 Query: 142 QPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRASLMGKSK 189 + V +++ Q +A G + E SAKT GV + F R K K Sbjct: 124 RTVDTKQAQDLARSYG-IPFIETSAKTRQGVDDAFYTLVREIRKHKEK 170 >2P5S-A nrPDB Length = 199 Score = 181 bits (459), Expect = 2e-46, Method: Composition-based stats. Identities = 56/184 (30%), Positives = 90/184 (48%), Gaps = 10/184 (5%) Query: 2 SQQVGNSIRRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENY-VADVEVDGRRVEL 60 ++ + K+V+ GD A GK+ L+ K +F E T+ ++ + + VDG R L Sbjct: 20 AKSFSSQKAYKIVLAGDAAVGKSSFLMRLCKNEFRENISATLGVDFQMKTLIVDGERTVL 79 Query: 61 ALWDTAGQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFC-QGVPIIL 119 LWDTAGQE + + + ++ VL+ + + S N++E W+ + + VPI+L Sbjct: 80 QLWDTAGQERFRSIAKSYFRKADGVLLLYDVTCEKSFLNIRE-WVDMIEDAAHETVPIML 138 Query: 120 VGCKVDLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAA 179 VG K D+R+ T EGQ+ V G+ +A GA + E SAK G + E Sbjct: 139 VGNKADIRDTAAT------EGQKCVPGHFGEKLAMTYGAL-FCETSAKDGSNIVEAVLHL 191 Query: 180 TRAS 183 R Sbjct: 192 AREV 195 >3CON-A nrPDB Length = 190 Score = 178 bits (453), Expect = 1e-45, Method: Composition-based stats. Identities = 45/170 (26%), Positives = 72/170 (42%), Gaps = 17/170 (10%) Query: 23 KTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDTAGQEDYDRLRPLSYPDS 82 K+ L I + F + Y PT+ ++Y V +DG L + DTAGQE+Y +R Sbjct: 34 KSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTG 93 Query: 83 NVVLICFSIDLPDSLENVQEKWIAEVLHF--CQGVPIILVGCKVDLRNDPQTIEQLRQEG 140 L F+I+ S ++ + ++ VP++LVG K DL Sbjct: 94 EGFLCVFAINNSKSFADI-NLYREQIKRVKDSDDVPMVLVGNKCDLPT------------ 140 Query: 141 QQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRASLMGKSKT 190 + V +++ +A G + E SAKT GV + F R + K Sbjct: 141 -RTVDTKQAHELAKSYG-IPFIETSAKTRQGVEDAFYTLVREIRQYRMKK 188 >5WDQ-A nrPDB Length = 170 Score = 178 bits (451), Expect = 2e-45, Method: Composition-based stats. Identities = 55/182 (30%), Positives = 81/182 (44%), Gaps = 15/182 (8%) Query: 6 GNSIRRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDT 65 G+ KLV+VG G GK+ L I + F + Y PT+ ++Y V +DG L + DT Sbjct: 3 GHMTEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDT 62 Query: 66 AGQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIA-EVLHFCQGVPIILVGCKV 124 AGQE+Y +R L F+I+ S E++ + + + VP++LVG K Sbjct: 63 AGQEEYSAMRDQYMRTGEGFLCVFAINNTKSFEDIHQYREQIKRVKDSDDVPMVLVGNKC 122 Query: 125 DLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRASL 184 D + V S++ Q +A G Y E SAKT GV + F R Sbjct: 123 D-------------AAARTVESRQAQDLARSYG-IPYIETSAKTRQGVEDAFYTLVREIR 168 Query: 185 MG 186 Sbjct: 169 QH 170 >5HZH-A nrPDB Length = 332 Score = 178 bits (451), Expect = 2e-45, Method: Composition-based stats. Identities = 73/140 (52%), Positives = 95/140 (67%) Query: 45 ENYVADVEVDGRRVELALWDTAGQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKW 104 + ++ G+ V L LWDTAG EDYDRLRPLSYP ++V LICFS+ P S ENV+ KW Sbjct: 190 DEAAKELGSGGKPVNLGLWDTAGLEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKW 249 Query: 105 IAEVLHFCQGVPIILVGCKVDLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYEC 164 EV H C PIILVG K+DLR+D TIE+L+++ P+T +G ++A +IGA Y EC Sbjct: 250 YPEVRHHCPNTPIILVGTKLDLRDDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLEC 309 Query: 165 SAKTGYGVREVFEAATRASL 184 SA T G++ VF+ A RA L Sbjct: 310 SALTQRGLKTVFDEAIRAVL 329 Score = 78.0 bits (191), Expect = 3e-15, Method: Composition-based stats. Identities = 29/51 (56%), Positives = 36/51 (70%) Query: 5 VGNSIRRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDG 55 G+ K V+VGDGA GKTCLLI ++ FP Y+PTVF+NY A+V VDG Sbjct: 1 GGSMQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDG 51 >1Z22-A nrPDB Length = 168 Score = 177 bits (449), Expect = 3e-45, Method: Composition-based stats. Identities = 50/182 (27%), Positives = 89/182 (48%), Gaps = 15/182 (8%) Query: 6 GNSIRRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYV-ADVEVDGRRVELALWD 64 G+ + K+V+VG+GA GK+ ++ + KG F + Y T+ +++ ++V+ V L LWD Sbjct: 1 GSEVAIKMVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQIQVNDEDVRLMLWD 60 Query: 65 TAGQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVPIILVGCKV 124 TAGQE++D + Y + ++ FS +S E + W +V+ +P LV K+ Sbjct: 61 TAGQEEFDAITKAYYRGAQACVLVFSTTDRESFEAISS-WREKVVAEVGDIPTALVQNKI 119 Query: 125 DLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRASL 184 DL +D + ++E + +A ++ +Y S K V EVF+ L Sbjct: 120 DLLDDS------------CIKNEEAEGLAKRLK-LRFYRTSVKEDLNVSEVFKYLAEKHL 166 Query: 185 MG 186 Sbjct: 167 QK 168 >5UHV-A nrPDB Length = 166 Score = 177 bits (448), Expect = 4e-45, Method: Composition-based stats. Identities = 44/165 (26%), Positives = 70/165 (42%), Gaps = 17/165 (10%) Query: 23 KTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDTAGQEDYDRLRPLSYPDS 82 K+ L I + F + Y PT+ ++Y V +DG L + DTAGQE+Y +R Sbjct: 16 KSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTG 75 Query: 83 NVVLICFSIDLPDSLENVQEKWIAEVLHF--CQGVPIILVGCKVDLRNDPQTIEQLRQEG 140 L F+I+ S ++ + ++ VP++LVG K DL Sbjct: 76 EGFLCVFAINNSKSFADI-NLYREQIKRVKDSDDVPMVLVGNKCDLPT------------ 122 Query: 141 QQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRASLM 185 + V +++ +A G + E SAKT GV + F R Sbjct: 123 -RTVDTKQAHELAKSYG-IPFIETSAKTRQGVEDAFYTLVREIRQ 165 >2CJW-A nrPDB Length = 192 Score = 175 bits (445), Expect = 1e-44, Method: Composition-based stats. Identities = 45/204 (22%), Positives = 80/204 (39%), Gaps = 21/204 (10%) Query: 7 NSIRRKLVIVGDGACGKTCLLIVF--SKGQFPEVYVPTVFENYVADVEVDGRR---VELA 61 ++V++G+ GK+ L +F + Y + VDG + L Sbjct: 3 GMTYYRVVLIGEQGVGKSTLANIFAGVHDSMDSDCEVLGEDTYERTLMVDGESATIILLD 62 Query: 62 LWDTAGQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIA-EVLHFCQGVPIILV 120 +W+ G+ ++ L + LI +SI S E E I + +PIILV Sbjct: 63 MWENKGENEW--LHDHCMQVGDAYLIVYSITDRASFEKASELRIQLRRARQTEDIPIILV 120 Query: 121 GCKVDLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAAT 180 G K DL + V+ EG++ A + + E SA + V+E+FE Sbjct: 121 GNKSDLVR------------CREVSVSEGRACA-VVFDCKFIETSAAVQHNVKELFEGIV 167 Query: 181 RASLMGKSKTNGKAKKNTTEKKKK 204 R + + ++ +K+K+ Sbjct: 168 RQVRLRRDSKEKNERRLAYQKRKE 191 >2GF0-A nrPDB Length = 199 Score = 175 bits (445), Expect = 1e-44, Method: Composition-based stats. Identities = 56/195 (28%), Positives = 93/195 (47%), Gaps = 24/195 (12%) Query: 23 KTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDTAGQEDYDRLRPLSYPDS 82 K+ L++ F KG F + Y+PT+ + Y + D L + DT G + ++ LS Sbjct: 21 KSSLVLRFVKGTFRDTYIPTIEDTYRQVISCDKSVCTLQITDTTGSHQFPAMQRLSISKG 80 Query: 83 NVVLICFSIDLPDSLENVQE--KWIAEVLHFCQGVPIILVGCKVDLRNDPQTIEQLRQEG 140 + ++ FS+ SLE + K I ++ + +P++LVG K D E Sbjct: 81 HAFILVFSVTSKQSLEELGPIYKLIVQIKGSVEDIPVMLVGNKCD-------------ET 127 Query: 141 QQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAAT------RASLMGKSKTNGKA 194 Q+ V ++E Q+VA + + E SAK Y V+E+F+ SL K +GK Sbjct: 128 QREVDTREAQAVAQEWK-CAFMETSAKMNYNVKELFQELLTLETRRNMSLNIDGKRSGKQ 186 Query: 195 KKNTTEKKKKKCVLL 209 K+ T++ K KC L+ Sbjct: 187 KR--TDRVKGKCTLM 199 >5UWI-A nrPDB Length = 237 Score = 175 bits (443), Expect = 2e-44, Method: Composition-based stats. Identities = 49/185 (26%), Positives = 87/185 (47%), Gaps = 17/185 (9%) Query: 1 MSQQVGNSIRRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFEN-YVADVEVDGRRVE 59 M+ Q ++ KLV+VGDG GKT + G+F + YV T+ + + ++ Sbjct: 22 MAAQGEPQVQFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIK 81 Query: 60 LALWDTAGQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVPIIL 119 +WDTAGQE + LR Y + +I F + + +NV W +++ C+ +PI+L Sbjct: 82 FNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVP-NWHRDLVRVCENIPIVL 140 Query: 120 VGCKVDLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAA 179 G KVD+++ R+ + + +++ YY+ SAK+ Y + F Sbjct: 141 CGNKVDIKD--------RKVKAKSIVFHRKKNL-------QYYDISAKSNYNFEKPFLWL 185 Query: 180 TRASL 184 R + Sbjct: 186 ARKLI 190 >2N1B-A nrPDB Length = 261 Score = 175 bits (443), Expect = 2e-44, Method: Composition-based stats. Identities = 49/185 (26%), Positives = 87/185 (47%), Gaps = 17/185 (9%) Query: 1 MSQQVGNSIRRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFEN-YVADVEVDGRRVE 59 M+ Q ++ KLV+VGDG GKT + G+F + YV T+ + + ++ Sbjct: 42 MAAQGEPQVQFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIK 101 Query: 60 LALWDTAGQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVPIIL 119 +WDTAGQE + LR Y + +I F + + +NV W +++ C+ +PI+L Sbjct: 102 FNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVP-NWHRDLVRVCENIPIVL 160 Query: 120 VGCKVDLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAA 179 G KVD+++ R+ + + +++ YY+ SAK+ Y + F Sbjct: 161 CGNKVDIKD--------RKVKAKSIVFHRKKNL-------QYYDISAKSNYNFEKPFLWL 205 Query: 180 TRASL 184 R + Sbjct: 206 ARKLI 210 >5CLL-A nrPDB Length = 191 Score = 174 bits (442), Expect = 2e-44, Method: Composition-based stats. Identities = 49/185 (26%), Positives = 87/185 (47%), Gaps = 17/185 (9%) Query: 1 MSQQVGNSIRRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFEN-YVADVEVDGRRVE 59 M+ Q ++ KLV+VGDG GKT + G+F + YV T+ + + ++ Sbjct: 1 MAAQGEPQVQFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIK 60 Query: 60 LALWDTAGQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVPIIL 119 +WDTAGQE + LR Y + +I F + + +NV W +++ C+ +PI+L Sbjct: 61 FNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVP-NWHRDLVRVCENIPIVL 119 Query: 120 VGCKVDLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAA 179 G KVD+++ R+ + + +++ YY+ SAK+ Y + F Sbjct: 120 CGNKVDIKD--------RKVKAKSIVFHRKKNL-------QYYDISAKSNYNFEKPFLWL 164 Query: 180 TRASL 184 R + Sbjct: 165 ARKLI 169 >5WDR-A nrPDB Length = 171 Score = 174 bits (441), Expect = 2e-44, Method: Composition-based stats. Identities = 50/165 (30%), Positives = 72/165 (43%), Gaps = 16/165 (9%) Query: 23 KTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDTAGQEDYDRLRPLSYPDS 82 K+ L I + F Y PT+ ++Y V +D L + DTAGQEDY +R Sbjct: 20 KSALTIQLIQQHFVTEYDPTIEDSYRKHVSIDDEACLLDILDTAGQEDYSAMRDQYMRTG 79 Query: 83 NVVLICFSIDLPDSLENVQEKWIAEVLHFC--QGVPIILVGCKVDLRNDPQTIEQLRQEG 140 L +SID SL+ + + ++L VP+ILVG K DL E Sbjct: 80 EGFLCVYSIDSQQSLDEI-HSFREQILRVKDQDEVPMILVGNKCDL------------EE 126 Query: 141 QQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRASLM 185 + V+++ GQ+VA + + E SAK V E F R Sbjct: 127 HREVSTEAGQAVAKSY-SIPFMETSAKKRINVEEAFYQLVREIRK 170 >4FMC-F nrPDB Length = 117 Score = 173 bits (439), Expect = 4e-44, Method: Composition-based stats. Identities = 36/118 (30%), Positives = 71/118 (60%), Gaps = 3/118 (2%) Query: 13 LVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENY-VADVEVDGRRVELALWDTAGQEDY 71 L+++GD GK+CLL+ F+ + E Y+ T+ ++ + +E+DG+ ++L +WDTAGQE + Sbjct: 1 LLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERF 60 Query: 72 DRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFC-QGVPIILVGCKVDLRN 128 + Y ++ +++ + + +S NV++ W+ E+ + + V +LVG K DL Sbjct: 61 RTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYASENVNKLLVGNKCDLTT 117 >2FN4-A nrPDB Length = 181 Score = 171 bits (434), Expect = 2e-43, Method: Composition-based stats. Identities = 49/169 (28%), Positives = 71/169 (42%), Gaps = 16/169 (9%) Query: 23 KTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDTAGQEDYDRLRPLSYPDS 82 K+ L I F + F Y PT+ ++Y VDG L + DTAGQE++ +R Sbjct: 22 KSALTIQFIQSYFVSDYDPTIEDSYTKICSVDGIPARLDILDTAGQEEFGAMREQYMRAG 81 Query: 83 NVVLICFSIDLPDSLENVQEKWIAEVLHFC--QGVPIILVGCKVDLRNDPQTIEQLRQEG 140 + L+ F+I+ S V K ++L P++LVG K DL E Sbjct: 82 HGFLLVFAINDRQSFNEVG-KLFTQILRVKDRDDFPVVLVGNKADL------------ES 128 Query: 141 QQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRASLMGKSK 189 Q+ V E + Y+E SAK V E FE RA + + Sbjct: 129 QRQVPRSEASAFGASHH-VAYFEASAKLRLNVDEAFEQLVRAVRKYQEQ 176 >2ERY-A nrPDB Length = 172 Score = 170 bits (431), Expect = 4e-43, Method: Composition-based stats. Identities = 49/169 (28%), Positives = 75/169 (44%), Gaps = 16/169 (9%) Query: 23 KTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDTAGQEDYDRLRPLSYPDS 82 K+ L I F + F Y PT+ ++Y +D R L + DTAGQE++ +R Sbjct: 18 KSALTIQFIQSYFVTDYDPTIEDSYTKQCVIDDRAARLDILDTAGQEEFGAMREQYMRTG 77 Query: 83 NVVLICFSIDLPDSLENVQEKWIAEVLHFCQG--VPIILVGCKVDLRNDPQTIEQLRQEG 140 L+ FS+ S E + K+ ++L P+IL+G K DL + Sbjct: 78 EGFLLVFSVTDRGSFEEIY-KFQRQILRVKDRDEFPMILIGNKADLDH------------ 124 Query: 141 QQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRASLMGKSK 189 Q+ VT +EGQ +A Q+ Y E SAK V + F R + + Sbjct: 125 QRQVTQEEGQQLARQLK-VTYMEASAKIRMNVDQAFHELVRVIRKFQEQ 172 >2G3Y-A nrPDB Length = 211 Score = 170 bits (430), Expect = 6e-43, Method: Composition-based stats. Identities = 46/199 (23%), Positives = 79/199 (39%), Gaps = 22/199 (11%) Query: 1 MSQQVGNSIRRKLVIVGDGACGKTCLLIVF--SKGQFPEVYVPTVFENYVADVEVDGRR- 57 +S + GN+ ++V++G+ GK+ L +F + Y + VDG Sbjct: 29 ISSESGNTY-YRVVLIGEQGVGKSTLANIFAGVHDSMDSDCEVLGEDTYERTLMVDGESA 87 Query: 58 --VELALWDTAGQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIA-EVLHFCQG 114 + L +W+ G+ ++ L + LI +SI S E E I + Sbjct: 88 TIILLDMWENKGENEW--LHDHCMQVGDAYLIVYSITDRASFEKASELRIQLRRARQTED 145 Query: 115 VPIILVGCKVDLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVRE 174 +PIILVG K DL + V+ EG++ A + + E SA + V+E Sbjct: 146 IPIILVGNKSDLVR------------CREVSVSEGRACA-VVFDCKFIETSAAVQHNVKE 192 Query: 175 VFEAATRASLMGKSKTNGK 193 +FE R + + Sbjct: 193 LFEGIVRQVRLRRDSKEKN 211 >3WYF-A nrPDB Length = 219 Score = 167 bits (424), Expect = 2e-42, Method: Composition-based stats. Identities = 47/187 (25%), Positives = 82/187 (43%), Gaps = 17/187 (9%) Query: 3 QQVGNSIRRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFEN-YVADVEVDGRRVELA 61 G KLV+VGDG GKT + G+F + Y+ T+ + + ++ Sbjct: 5 AANGEVPTFKLVLVGDGGTGKTTFVKRHLTGEFEKKYIATIGVEVHPLSFYTNFGEIKFD 64 Query: 62 LWDTAGQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVPIILVG 121 +WDTAG E + LR Y ++ +I F + + +NV W +++ C+ +PI+L G Sbjct: 65 VWDTAGLEKFGGLRDGYYINAQCAIIMFDVTSRITYKNVP-NWHRDLVRVCENIPIVLCG 123 Query: 122 CKVDLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATR 181 KVD++ R+ + +T +++ YY+ SAK+ Y + F R Sbjct: 124 NKVDVKE--------RKVKAKTITFHRKKNL-------QYYDISAKSNYNFEKPFLWLAR 168 Query: 182 ASLMGKS 188 Sbjct: 169 KLAGNPQ 175 >5XOJ-A nrPDB Length = 182 Score = 166 bits (421), Expect = 5e-42, Method: Composition-based stats. Identities = 47/187 (25%), Positives = 82/187 (43%), Gaps = 17/187 (9%) Query: 3 QQVGNSIRRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFEN-YVADVEVDGRRVELA 61 G KLV+VGDG GKT + G+F + Y+ T+ + + ++ Sbjct: 5 AANGEVPTFKLVLVGDGGTGKTTFVKRHLTGEFEKKYIATIGVEVHPLSFYTNFGEIKFD 64 Query: 62 LWDTAGQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVPIILVG 121 +WDTAG E + LR Y ++ +I F + + +NV W +++ C+ +PI+L G Sbjct: 65 VWDTAGLEKFGGLRDGYYINAQCAIIMFDVTSRITYKNVP-NWHRDLVRVCENIPIVLCG 123 Query: 122 CKVDLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATR 181 KVD++ R+ + +T +++ YY+ SAK+ Y + F R Sbjct: 124 NKVDVKE--------RKVKAKTITFHRKKNL-------QYYDISAKSNYNFEKPFLWLAR 168 Query: 182 ASLMGKS 188 Sbjct: 169 KLAGNPQ 175 >3T5G-A nrPDB Length = 181 Score = 166 bits (421), Expect = 6e-42, Method: Composition-based stats. Identities = 50/191 (26%), Positives = 89/191 (46%), Gaps = 16/191 (8%) Query: 5 VGNSIRRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWD 64 + S RK+ I+G + GK+ L I F +GQF + Y PT+ + + V+G+ L L D Sbjct: 1 MPQSKSRKIAILGYRSVGKSSLTIQFVEGQFVDSYDPTIENTFTKLITVNGQEYHLQLVD 60 Query: 65 TAGQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQ--EKWIAEVLHFCQGVPIILVGC 122 TAGQ++Y D N ++ +S+ S E ++ + +++ Q +PI+LVG Sbjct: 61 TAGQDEYSIFPQTYSIDINGYILVYSVTSIKSFEVIKVIHGKLLDMVGKVQ-IPIMLVGN 119 Query: 123 KVDLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRA 182 K DL ++ ++ +EG+++A+ A + E SAK +VF Sbjct: 120 KKDLHM------------ERVISYEEGKALAESWNA-AFLESSAKENQTAVDVFRRIILE 166 Query: 183 SLMGKSKTNGK 193 + + Sbjct: 167 AEKMDGACSQG 177 >3PIR-A nrPDB Length = 183 Score = 165 bits (419), Expect = 9e-42, Method: Composition-based stats. Identities = 46/166 (27%), Positives = 75/166 (45%), Gaps = 17/166 (10%) Query: 23 KTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDTAGQEDYDRLRPLSYPDS 82 K+ L I F + F Y PT+ ++Y+ E+D + L + DTAGQE++ +R Sbjct: 31 KSALTIQFFQKIFVPEYDPTIEDSYLKHTEIDNQWAILDVLDTAGQEEFSAMREQYMRTG 90 Query: 83 NVVLICFSIDLPDSLENVQEKWIAEVLHFC--QGVPIILVGCKVDLRNDPQTIEQLRQEG 140 + LI +S+ S E+V +++ +L + P+ILV KVDL + Sbjct: 91 DGFLIVYSVTDKASFEHV-DRFHQLILRVKDRESFPMILVANKVDLMH------------ 137 Query: 141 QQPVTSQEGQSVADQIGATGYYECSAKT-GYGVREVFEAATRASLM 185 + VT +G+ +A + Y E SAK V + F R Sbjct: 138 LRKVTRDQGKEMATKYN-IPYIETSAKDPPLNVDKTFHDLVRVIRQ 182 >3RAP-R nrPDB Length = 167 Score = 161 bits (409), Expect = 1e-40, Method: Composition-based stats. Identities = 46/162 (28%), Positives = 78/162 (48%), Gaps = 16/162 (9%) Query: 23 KTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDTAGQEDYDRLRPLSYPDS 82 K+ L + F G F E Y PT+ + Y ++EVD L + DTAG E + +R L + Sbjct: 16 KSALTVQFVTGTFIEKYDPTIEDFYRKEIEVDSSPSVLEILDTAGTEQFASMRDLYIKNG 75 Query: 83 NVVLICFSIDLPDSLENVQEKW--IAEVLHFCQGVPIILVGCKVDLRNDPQTIEQLRQEG 140 ++ +S+ S ++++ I V + + VP+ILVG KVDL ++ + Sbjct: 76 QGFILVYSLVNQQSFQDIKPMRDQIIRVKRY-EKVPVILVGNKVDLESEREVSSSE---- 130 Query: 141 QQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRA 182 G+++A++ G + E SAK+ V E+F R Sbjct: 131 --------GRALAEEWG-CPFMETSAKSKTMVDELFAEIVRQ 163 >3CBQ-A nrPDB Length = 195 Score = 161 bits (408), Expect = 2e-40, Method: Composition-based stats. Identities = 48/190 (25%), Positives = 76/190 (40%), Gaps = 16/190 (8%) Query: 4 QVGNSIRRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTV-FENYVADVEVDGRRVELAL 62 Q K+++VG+ GK+ L F Q + P + Y + VD V L + Sbjct: 17 QGQKDGIFKVMLVGESGVGKSTLAGTFGGLQGDSAHEPENPEDTYERRIMVDKEEVTLVV 76 Query: 63 WDTAGQEDYDR-LRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQ-GVPIILV 120 +D Q D LR + LI FS+ S V E + +P+ILV Sbjct: 77 YDIWEQGDAGGWLRDHCLQTGDAFLIVFSVTDRRSFSKVPETLLRLRAGRPHHDLPVILV 136 Query: 121 GCKVDLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAAT 180 G K DL + V+ +EG+ +A + + + E SA + RE+FE A Sbjct: 137 GNKSDLARS------------REVSLEEGRHLAGTL-SCKHIETSAALHHNTRELFEGAV 183 Query: 181 RASLMGKSKT 190 R + + + Sbjct: 184 RQIRLRRGRN 193 >4CZ2-A nrPDB Length = 230 Score = 158 bits (401), Expect = 1e-39, Method: Composition-based stats. Identities = 41/191 (21%), Positives = 77/191 (40%), Gaps = 20/191 (10%) Query: 11 RKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENY-VADVEVDGRR-VELALWDTAGQ 68 K++++G+ GKT ++ + F + Y T+ ++ + + D R V L LWD AG Sbjct: 31 FKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGL 90 Query: 69 EDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEV---LHFCQGVPI--ILVGCK 123 E + + + Y ++ + F I + E V KW +++ +H G PI +L+ K Sbjct: 91 ERFGNMTRVYYKEAMGAFVVFDISRSSTFEAVL-KWKSDLDSKVHLPNGSPIPAVLLANK 149 Query: 124 VDLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRAS 183 D Q ++ + + G G++E SAK + E Sbjct: 150 CD------------QNKDSSMSPSQMDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKM 197 Query: 184 LMGKSKTNGKA 194 L+ + Sbjct: 198 LVNHQSFPNEE 208 >3OES-A nrPDB Length = 201 Score = 157 bits (398), Expect = 3e-39, Method: Composition-based stats. Identities = 50/187 (26%), Positives = 83/187 (44%), Gaps = 14/187 (7%) Query: 10 RRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDTAGQE 69 RK+VI+G GKT L F +G+F E Y PTV Y V + L L DTAGQ+ Sbjct: 24 YRKVVILGYRCVGKTSLAHQFVEGEFSEGYDPTVENTYSKIVTLGKDEFHLHLVDTAGQD 83 Query: 70 DYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVL-HFCQGVPIILVGCKVDLRN 128 +Y L + ++ +S+ S + ++ + H VP++LVG K DL Sbjct: 84 EYSILPYSFIIGVHGYVLVYSVTSLHSFQVIESLYQKLHEGHGKTRVPVVLVGNKADLS- 142 Query: 129 DPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRASLMGKS 188 ++ V + EG+ +A+ GAT + E SA+ + +F + ++ Sbjct: 143 -----------PEREVQAVEGKKLAESWGAT-FMESSARENQLTQGIFTKVIQEIARVEN 190 Query: 189 KTNGKAK 195 + + Sbjct: 191 SYGQERR 197 >6FF8-A nrPDB Length = 181 Score = 156 bits (396), Expect = 4e-39, Method: Composition-based stats. Identities = 41/186 (22%), Positives = 75/186 (40%), Gaps = 20/186 (10%) Query: 11 RKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENY-VADVEVDGRR-VELALWDTAGQ 68 K++++G+ GKT ++ + F + Y T+ ++ + + D R V L LWD AG Sbjct: 9 FKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGL 68 Query: 69 EDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEV---LHFCQGVPI--ILVGCK 123 E + + + Y ++ + F I + E V KW +++ +H G PI +L+ K Sbjct: 69 ERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVL-KWKSDLDSKVHLPNGSPIPAVLLANK 127 Query: 124 VDLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRAS 183 D D + + + G G++E SAK + E Sbjct: 128 CDQNKDSSQ------------SPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKI 175 Query: 184 LMGKSK 189 L+ Sbjct: 176 LVNHQS 181 >2NZJ-A nrPDB Length = 175 Score = 153 bits (386), Expect = 6e-38, Method: Composition-based stats. Identities = 47/175 (26%), Positives = 74/175 (42%), Gaps = 16/175 (9%) Query: 7 NSIRRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDTA 66 + ++V++GD GKT L +F+ Q +++ + Y + VDG L + DT Sbjct: 1 SMALYRVVLLGDPGVGKTSLASLFAGKQERDLHEQLGEDVYERTLTVDGEDTTLVVVDTW 60 Query: 67 GQEDYDRLRPL--SYPDSNVVLICFSIDLPDSLENVQEKWIA-EVLHFCQGVPIILVGCK 123 E D+ + +I +SI S E+ E I H VPIILVG K Sbjct: 61 EAEKLDKSWSQESCLQGGSAYVIVYSIADRGSFESASELRIQLRRTHQADHVPIILVGNK 120 Query: 124 VDLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEA 178 DL + V+ +EG++ A + + E SA + V E+FE Sbjct: 121 ADLAR------------CREVSVEEGRACA-VVFDCKFIETSATLQHNVAELFEG 162 >3Q85-A nrPDB Length = 169 Score = 151 bits (382), Expect = 2e-37, Method: Composition-based stats. Identities = 45/180 (25%), Positives = 73/180 (40%), Gaps = 16/180 (8%) Query: 11 RKLVIVGDGACGKTCLLIVFSKGQFPEVYV-PTVFENYVADVEVDGRRVELALWDTAGQE 69 K+++VG+ GK+ L F Q + + Y + VD V L ++D Q Sbjct: 3 FKVMLVGESGVGKSTLAGTFGGLQGDHAHEMENSEDTYERRIMVDKEEVTLIVYDIWEQG 62 Query: 70 DYDR-LRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQ-GVPIILVGCKVDLR 127 D L+ + LI FS+ S V E + +P+ILVG K DL Sbjct: 63 DAGGWLQDHCLQTGDAFLIVFSVTDRRSFSKVPETLLRLRAGRPHHDLPVILVGNKSDLA 122 Query: 128 NDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRASLMGK 187 + V+ +EG+ +A + + + E SA + RE+FE A R + + Sbjct: 123 RS------------REVSLEEGRHLAGTL-SCKHIETSAALHHNTRELFEGAVRQIRLRR 169 >5XC3-A nrPDB Length = 176 Score = 146 bits (368), Expect = 7e-36, Method: Composition-based stats. Identities = 36/169 (21%), Positives = 71/169 (42%), Gaps = 16/169 (9%) Query: 11 RKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEV--DGRRVELALWDTAGQ 68 K++++G GK+ ++ F + PT+ + + + +G+ ++L +WDTAGQ Sbjct: 6 YKIILIGSSGVGKSSIVHQFLFNRKISNVSPTIGAAFASKQVIAKNGKTLKLNIWDTAGQ 65 Query: 69 EDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVPIIL-VGCKVDLR 127 E + + + Y +S L+ F + +S ++V WI ++ C IL V K+D+ Sbjct: 66 ERFRSITKMYYTNSLGCLVVFDVTDRESFDDVY-YWINDLRINCHTTYYILVVANKIDID 124 Query: 128 NDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVF 176 + V+ E + Y S+ V +F Sbjct: 125 KNNWR-----------VSENEIKKFCRD-NDCDYVFASSFESDTVNNLF 161 >3Q72-A nrPDB Length = 166 Score = 145 bits (366), Expect = 1e-35, Method: Composition-based stats. Identities = 40/178 (22%), Positives = 67/178 (37%), Gaps = 15/178 (8%) Query: 11 RKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDTAGQED 70 K++++G GK+ L +F + Y + VDG L ++D Q+ Sbjct: 3 YKVLLLGAPGVGKSALARIFGGVEDGPEAEA-AGHTYDRSIVVDGEEASLMVYDIWEQDG 61 Query: 71 YDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIA-EVLHFCQGVPIILVGCKVDLRND 129 L + +I +S+ S E E + VPIILVG K DL Sbjct: 62 GRWLPGHCMAMGDAYVIVYSVTDKGSFEKASELRVQLRRARQTDDVPIILVGNKSDLVRS 121 Query: 130 PQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRASLMGK 187 + V+ EG++ A + + E SA + V+ +FE R + + Sbjct: 122 ------------REVSVDEGRACA-VVFDCKFIETSAALHHNVQALFEGVVRQIRLRR 166 >3E5H-A nrPDB Length = 178 Score = 145 bits (366), Expect = 2e-35, Method: Composition-based stats. Identities = 46/188 (24%), Positives = 85/188 (45%), Gaps = 18/188 (9%) Query: 5 VGNSIRRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVF-ENYVADVEVDGR-RVELAL 62 + + K+V++GDGA GKT L F++ F + Y T+ + ++ + + G V L + Sbjct: 1 GSHMRQLKIVVLGDGASGKTSLTTCFAQETFGKQYKQTIGLDFFLRRITLPGNLNVTLQI 60 Query: 63 WDTAGQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKW--IAEVLHFCQGVPII-L 119 WD GQ ++ + VL+ + I S EN+++ + + +V + P++ L Sbjct: 61 WDIGGQTIGGKMLDKYIYGAQGVLLVYDITNYQSFENLEDWYTVVKKVSEESETQPLVAL 120 Query: 120 VGCKVDLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAA 179 VG K+DL E + + ++ + G + ++ SAKTG V F+ Sbjct: 121 VGNKIDL------------EHMRTIKPEKHLRFCQENGFSSHF-VSAKTGDSVFLCFQKV 167 Query: 180 TRASLMGK 187 L K Sbjct: 168 AAEILGIK 175 >4DJT-A nrPDB Length = 218 Score = 143 bits (360), Expect = 6e-35, Method: Composition-based stats. Identities = 42/184 (22%), Positives = 79/184 (42%), Gaps = 17/184 (9%) Query: 8 SIRRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFE--NYVADVEVDGRRVELALWDT 65 + K+ ++GDG GKT + G+F + Y TV + V ++ G ++ +WDT Sbjct: 9 ELTYKICLIGDGGVGKTTYINRVLDGRFEKNYNATVGAVNHPVTFLDDQGNVIKFNVWDT 68 Query: 66 AGQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQG-VPIILVGCKV 124 AGQE L+ + Y ++ ++ F + + +N+ +W+ E PI++ K+ Sbjct: 69 AGQEKKAVLKDVYYIGASGAILFFDVTSRITCQNLA-RWVKEFQAVVGNEAPIVVCANKI 127 Query: 125 DLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRASL 184 D++N + ++L E + + Y+E SAKT + F R Sbjct: 128 DIKNRQKISKKLVMEVLKGKNYE-------------YFEISAKTAHNFGLPFLHLARIFT 174 Query: 185 MGKS 188 Sbjct: 175 GRPD 178 >3CLV-A nrPDB Length = 208 Score = 142 bits (358), Expect = 1e-34, Method: Composition-based stats. Identities = 41/217 (18%), Positives = 79/217 (36%), Gaps = 54/217 (24%) Query: 5 VGNSIRRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENY----------------- 47 + K V++G+ + GK+ +++ +K F E T+ ++ Sbjct: 2 MEKKSSYKTVLLGESSVGKSSIVLRLTKDTFHENTNTTIGASFCTYVVNLNDINIKNNSN 61 Query: 48 ------------VADVEVDGR---------RVELALWDTAGQEDYDRLRPLSYPDSNVVL 86 +V + + ++ +WDTAGQE Y + PL Y + + Sbjct: 62 NEKNNNINSINDDNNVIITNQHNNYNENLCNIKFDIWDTAGQERYASIVPLYYRGATCAI 121 Query: 87 ICFSIDLPDSLENVQEKWIAEVLHFCQGVPIILVGCKVDLRNDPQTIEQLRQEGQQPVTS 146 + F I ++L+ + W+ ++ IILV K+D + + V Sbjct: 122 VVFDISNSNTLDRAKT-WVNQLK-ISSNYIIILVANKID-------------KNKFQVDI 166 Query: 147 QEGQSVADQIGATGYYECSAKTGYGVREVFEAATRAS 183 E Q A + + SAKTG ++ +F Sbjct: 167 LEVQKYAQDNNLL-FIQTSAKTGTNIKNIFYMLAEEI 202 >5C1S-A nrPDB Length = 391 Score = 131 bits (331), Expect = 2e-31, Method: Composition-based stats. Identities = 40/184 (21%), Positives = 75/184 (40%), Gaps = 21/184 (11%) Query: 3 QQVGNSIRRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELAL 62 Q+ +L++VG GKT L F E + E V++D + +++ Sbjct: 55 SQIIGKKEIRLLVVGSSGVGKTTLC-----DCFFESHQSQGEETREKHVQIDNDFIRISI 109 Query: 63 WDTAGQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQ-GVPIILVG 121 D AGQ+ + Y + +L+ + I S +++ W+ ++ +C II++G Sbjct: 110 SDIAGQQSFYAC-DNPYDGYDAILVMYDITELKSFTDLKTMWLPDIFLYCNIDTQIIIIG 168 Query: 122 CKVDLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATR 181 K D QE + +T +E + A +YE S K + +F+ +R Sbjct: 169 NKKD------------QEIDRIITRKEAEQFAQD-RLCQFYEISTKDD-SCQLLFDCISR 214 Query: 182 ASLM 185 L Sbjct: 215 DFLQ 218 Score = 80.7 bits (198), Expect = 4e-16, Method: Composition-based stats. Identities = 38/188 (20%), Positives = 75/188 (39%), Gaps = 22/188 (11%) Query: 8 SIRRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENY---VADVEVDGRRVELALWD 64 I+ ++++VGD GKT + F+ + PT + E++ + E+ + D Sbjct: 220 DIKIRMLMVGDQNVGKTTFIRKFA------LQDPTGHDFMNAITTRFEMEKIKYEIIMID 273 Query: 65 TAGQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVPIILVGCKV 124 + P +LI + I +S +N+ K+ + + V ++VG K Sbjct: 274 WGFYNKLLQTNPAISRTIEAILIVYDITNEESFQNIHRKYYPLINNKFSDVAGVIVGYKT 333 Query: 125 DLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRASL 184 DL E Q+ +T + ++AD +G Y E S+K + +A + Sbjct: 334 DL------------EAQRKITMGDALTLADWLG-YKYVEMSSKDTEDHSSIIKALAHSIR 380 Query: 185 MGKSKTNG 192 + + K Sbjct: 381 INRLKIEQ 388 >3C5C-A nrPDB Length = 187 Score = 128 bits (322), Expect = 2e-30, Method: Composition-based stats. Identities = 46/185 (24%), Positives = 78/185 (42%), Gaps = 22/185 (11%) Query: 7 NSIRRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDTA 66 + L I+G GK+ L + F +F Y P + + Y ++ VD + V L + DTA Sbjct: 18 GPLEVNLAILGRRGAGKSALTVKFLTKRFISEYDPNLEDTYSSEETVDHQPVHLRVMDTA 77 Query: 67 GQEDYDRLRPL--SYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQ---GVPIILVG 121 D D R ++ L+ +S+D S ++ LH + +P +L+G Sbjct: 78 ---DLDTPRNCERYLNWAHAFLVVYSVDSRQSFDSSSSYLELLALHAKETQRSIPALLLG 134 Query: 122 CKVDLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTG-YGVREVFEAAT 180 K+D+ + VT EG ++A + G ++E SA V+ VF A Sbjct: 135 NKLDMAQY------------RQVTKAEGVALAGRFG-CLFFEVSACLDFEHVQHVFHEAV 181 Query: 181 RASLM 185 R + Sbjct: 182 REARR 186 >2AL7-A nrPDB Length = 186 Score = 116 bits (292), Expect = 5e-27, Method: Composition-based stats. Identities = 41/177 (23%), Positives = 66/177 (37%), Gaps = 30/177 (16%) Query: 6 GNSIRRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDT 65 G+ +L +VG GKT + V + GQF E +PTV N V V + +WD Sbjct: 18 GSKEEMELTLVGLQYSGKTTFVNVIASGQFSEDMIPTVGFNMRK---VTKGNVTIKIWDI 74 Query: 66 AGQEDYDRLRPLSYPDSNVVLICFSID---------LPDSLENVQEKWIAEVLHFCQGVP 116 GQ + + N I + ID + L N+ +K QG+P Sbjct: 75 GGQPRFRSMWERYCRGVNA--IVYMIDAADREKIEASRNELHNLLDK------PQLQGIP 126 Query: 117 IILVGCKVDLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVR 173 ++++G K DL N + + + + +E Y S K + Sbjct: 127 VLVLGNKRDLPNALDEKQLIEKMNLSAIQDRE---------ICCY-SISCKEKDNID 173 >4ILE-A nrPDB Length = 184 Score = 109 bits (273), Expect = 8e-25, Method: Composition-based stats. Identities = 38/175 (21%), Positives = 63/175 (36%), Gaps = 30/175 (17%) Query: 8 SIRRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDTAG 67 +L +VG GKT + V + GQF E +PTV N + V + LWD G Sbjct: 20 KEEMELTLVGLQYSGKTTFVNVIASGQFNEDMIPTVGFNMRK---ITKGNVTIKLWDIGG 76 Query: 68 QEDYDRLRPLSYPDSNVVLICFSID---------LPDSLENVQEKWIAEVLHFCQGVPII 118 Q + + + I + +D + L N+ +K QG+P++ Sbjct: 77 QPRFRSMWERYCRGVSA--IVYMVDAADQEKIEASKNELHNLLDK------PQLQGIPVL 128 Query: 119 LVGCKVDLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVR 173 ++G K DL E + + + +E Y S K + Sbjct: 129 VLGNKRDLPGALDEKELIEKMNLSAIQDRE---------ICCY-SISCKEKDNID 173 >3D6T-B nrPDB Length = 171 Score = 106 bits (266), Expect = 5e-24, Method: Composition-based stats. Identities = 32/139 (23%), Positives = 61/139 (43%), Gaps = 8/139 (5%) Query: 11 RKLVIVGDGACGKTCLLIVFSKGQFPEV--YVPTVFENYVADVEVD-----GRRVELALW 63 KL+IVG+ GKT LL K + ++ TV + V D + R + L +W Sbjct: 1 MKLMIVGNTGSGKTTLLQQLMKTKKSDLGMQSATVGID-VKDWPIQIRDKRKRDLVLNVW 59 Query: 64 DTAGQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVPIILVGCK 123 D AG+E++ P + L + + + + + W+ + P+ILVG Sbjct: 60 DFAGREEFYSTHPHFMTQRALYLAVYDLSKGQAEVDAMKPWLFNIKARASSSPVILVGTH 119 Query: 124 VDLRNDPQTIEQLRQEGQQ 142 +D+ ++ Q + + ++ Sbjct: 120 LDVSDEKQRKACMSKITKE 138 >3IHW-A nrPDB Length = 184 Score = 91.5 bits (226), Expect = 2e-19, Method: Composition-based stats. Identities = 34/181 (18%), Positives = 70/181 (38%), Gaps = 17/181 (9%) Query: 10 RRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDTAGQE 69 K+ IVG+ + GK+ L+ + G + + P + ++ VDG+ L + D G Sbjct: 20 ELKVGIVGNLSSGKSALVHRYLTGTYVQEESPEGG-RFKKEIVVDGQSYLLLIRDEGGPP 78 Query: 70 DYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVL-HFCQGVPIILVGCKVDLRN 128 + + V+ FS++ S + V ++ VP++LVG + Sbjct: 79 EL-----QFAAWVDAVVFVFSLEDEISFQTVYNYFLRLCSFRNASEVPMVLVGTQ----- 128 Query: 129 DPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRASLMGKS 188 + + + + + ++ + YYE A G V VF+ + + + Sbjct: 129 -----DAISAANPRVIDDSRARKLSTDLKRCTYYETCATYGLNVERVFQDVAQKVVALRK 183 Query: 189 K 189 K Sbjct: 184 K 184 >2YC4-C nrPDB Length = 208 Score = 86.1 bits (212), Expect = 1e-17, Method: Composition-based stats. Identities = 37/168 (22%), Positives = 63/168 (37%), Gaps = 22/168 (13%) Query: 8 SIRRKLVIVGDGACGKTCLLIVFSKG--QFPEVYVPTVFENYV-ADVEVDGRRV--ELAL 62 ++R K+ +VG+ GK+ L+ +F+ +F + Y T V A V + V EL L Sbjct: 18 TLRCKVAVVGEATVGKSALISMFTSKGSKFLKDYAMTSGVEVVVAPVTIPDTTVSVELFL 77 Query: 63 WDTAGQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQG----VPII 118 DTAG + Y + ++ F + +S E+ + W + + + Sbjct: 78 LDTAGSDLYKEQISQYWNGVYYAILVFDVSSMESFESCKA-WFELLKSARPDRERPLRAV 136 Query: 119 LVGCKVDLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSA 166 LV K DL V Q A +++ SA Sbjct: 137 LVANKTDLPPQRH-----------QVRLDMAQDWATT-NTLDFFDVSA 172 >2IWR-A nrPDB Length = 178 Score = 78.4 bits (192), Expect = 2e-15, Method: Composition-based stats. Identities = 36/186 (19%), Positives = 76/186 (40%), Gaps = 21/186 (11%) Query: 10 RRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDTAGQE 69 +L ++GD GK+ L+ F G + +V T E Y ++ VDG+ + + + AG Sbjct: 7 ELRLGVLGDARSGKSSLIHRFLTGSY-QVLEKTESEQYKKEMLVDGQTHLVLIREEAGAP 65 Query: 70 DYDRLRPLSYPD-SNVVLICFSIDLPDSLENVQ--EKWIAEVLHFC-QGVPIILVGCKVD 125 D + ++ V+ FS++ +S + V ++ + G+ + LVG + Sbjct: 66 D------AKFSGWADAVIFVFSLEDENSFQAVSRLHGQLSSLRGEGRGGLALALVGTQ-- 117 Query: 126 LRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRASLM 185 +++ + V +++ + YYE A G V VF+ + + Sbjct: 118 --------DRISASSPRVVGDARARALCADMKRCSYYETCATYGLNVDRVFQEVAQKVVT 169 Query: 186 GKSKTN 191 + + Sbjct: 170 LRKQQQ 175 >2H16-A nrPDB Length = 183 Score = 78.0 bits (191), Expect = 3e-15, Method: Composition-based stats. Identities = 28/144 (19%), Positives = 57/144 (39%), Gaps = 5/144 (3%) Query: 6 GNSIRRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDT 65 G+ K++IVG GKT +L FS + PT+ N V ++ ++ R + WD Sbjct: 18 GSHQEHKVIIVGLDNAGKTTILYQFSMNEVVHTS-PTIGSN-VEEIVINNTRFLM--WDI 73 Query: 66 AGQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHF-CQGVPIILVGCKV 124 GQE Y ++ V++ + + +E+ + H + +++ K Sbjct: 74 GGQESLRSSWNTYYTNTEFVIVVVDSTDRERISVTREELYKMLAHEDLRKAGLLIFANKQ 133 Query: 125 DLRNDPQTIEQLRQEGQQPVTSQE 148 D++ E + + + Sbjct: 134 DVKECMTVAEISQFLKLTSIKDHQ 157 >6HLU-A nrPDB Length = 974 Score = 76.9 bits (188), Expect = 6e-15, Method: Composition-based stats. Identities = 42/206 (20%), Positives = 70/206 (33%), Gaps = 29/206 (14%) Query: 10 RRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVAD-------VEVDGR--RVEL 60 K+ ++GDG GKT LL F T N V +E D Sbjct: 480 EIKVHLIGDGMAGKTSLLKQLIGETFDPKESQTHGLNVVTKQAPNIKGLENDDELKECLF 539 Query: 61 ALWDTAGQEDYDRLRPLSYPDSNVV-LICFSIDLPDSLENVQEKWIAEVLHFCQGVPIIL 119 WD GQE S+V L+ S + + W+ + + P+I+ Sbjct: 540 HFWDFGGQEIMHASHQFFMTRSSVYMLLLDSRTDSN-----KHYWLRHIEKYGGKSPVIV 594 Query: 120 VGCKVDLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAA 179 V K+D +P + ++ ++ + ++ S K G GV + ++ Sbjct: 595 VMNKID--ENPSYNIEQKKINERFPAIEN-----------RFHRISCKNGDGVESIAKSL 641 Query: 180 TRASLMGKSKTNGKAKKNTTEKKKKK 205 A L G + K K+K Sbjct: 642 KSAVL-HPDSIYGTPLAPSWIKVKEK 666 >3DPU-A nrPDB Length = 535 Score = 76.1 bits (186), Expect = 1e-14, Method: Composition-based stats. Identities = 42/206 (20%), Positives = 70/206 (33%), Gaps = 29/206 (14%) Query: 10 RRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVAD-------VEVDGR--RVEL 60 K+ ++GDG GKT LL F T N V +E D Sbjct: 41 EIKVHLIGDGMAGKTSLLKQLIGETFDPKESQTHGLNVVTKQAPNIKGLENDDELKECLF 100 Query: 61 ALWDTAGQEDYDRLRPLSYPDSNVV-LICFSIDLPDSLENVQEKWIAEVLHFCQGVPIIL 119 WD GQE S+V L+ S + + W+ + + P+I+ Sbjct: 101 HFWDFGGQEIMHASHQFFMTRSSVYMLLLDSRTDSN-----KHYWLRHIEKYGGKSPVIV 155 Query: 120 VGCKVDLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAA 179 V K+D +P + ++ ++ + ++ S K G GV + ++ Sbjct: 156 VMNKID--ENPSYNIEQKKINERFPAIEN-----------RFHRISCKNGDGVESIAKSL 202 Query: 180 TRASLMGKSKTNGKAKKNTTEKKKKK 205 A L G + K K+K Sbjct: 203 KSAVL-HPDSIYGTPLAPSWIKVKEK 227 >4WNR-A nrPDB Length = 349 Score = 75.7 bits (185), Expect = 1e-14, Method: Composition-based stats. Identities = 31/165 (18%), Positives = 57/165 (34%), Gaps = 19/165 (11%) Query: 10 RRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVA-DVEVDGRRVELALWDTAGQ 68 K+++VGDG GKT LL F T N + + +++ WD GQ Sbjct: 41 EVKVLLVGDGEAGKTSLLKRLLGEGFDGNEHQTQGINIKKWGFKDKDKEIKVNFWDFGGQ 100 Query: 69 EDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVPIILVGCKVDLRN 128 E ++ ++ +D + E W+ + F P+++ K+D Sbjct: 101 EIMHATHQFFLSKRSLYILV--LDSRR--DEKAEYWLKHIRSFGGDSPVLVALNKIDENP 156 Query: 129 DPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVR 173 + + QE + G++ S K G+ Sbjct: 157 SFELNRKFLQEKYPSIK--------------GFFRISCKEDRGIE 187 >1YZG-A nrPDB Length = 179 Score = 74.9 bits (183), Expect = 2e-14, Method: Composition-based stats. Identities = 24/121 (19%), Positives = 47/121 (38%), Gaps = 5/121 (4%) Query: 8 SIRRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDTAG 67 + K++IVG GKT +L F + PT+ N V + +WD G Sbjct: 14 NQEHKVIIVGLDNAGKTTILYQFLMNEVVHTS-PTIGSNVEEIVV---KNTHFLMWDIGG 69 Query: 68 QEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHF-CQGVPIILVGCKVDL 126 QE Y ++ +++ + L +E+ + H + +++ K D+ Sbjct: 70 QESLRSSWNTYYSNTEFIILVVDSIDRERLAITKEELYRMLAHEDLRKAAVLIFANKQDM 129 Query: 127 R 127 + Sbjct: 130 K 130 >3LVQ-E nrPDB Length = 497 Score = 72.6 bits (177), Expect = 1e-13, Method: Composition-based stats. Identities = 27/142 (19%), Positives = 57/142 (40%), Gaps = 5/142 (3%) Query: 4 QVGNSIRRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALW 63 + ++ +++++G A GKT +L GQ +PTV N V + V+ +W Sbjct: 316 EGLSNKEMRILMLGLDAAGKTTILYKLKLGQSVTT-IPTVGFN---VETVTYKNVKFNVW 371 Query: 64 DTAGQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVL-HFCQGVPIILVGC 122 D GQ+ L Y + ++ D ++ +++ + + I++ Sbjct: 372 DVGGQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRDAIILIFAN 431 Query: 123 KVDLRNDPQTIEQLRQEGQQPV 144 K DL + + E + G + Sbjct: 432 KQDLPDAMKPHEIQEKLGLTRI 453 >2A5F-A nrPDB Length = 175 Score = 70.3 bits (171), Expect = 5e-13, Method: Composition-based stats. Identities = 27/136 (19%), Positives = 54/136 (39%), Gaps = 5/136 (3%) Query: 10 RRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDTAGQE 69 +++++G A GKT +L GQ +PTV N V + V+ +WD GQ+ Sbjct: 13 EMRILMLGLDAAGKTTILYKLKLGQSVTT-IPTVGFN---VETVTYKNVKFNVWDVGGQD 68 Query: 70 DYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVL-HFCQGVPIILVGCKVDLRN 128 L Y + ++ D ++ +++ + + I++ K DL + Sbjct: 69 KIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRDAIILIFANKQDLPD 128 Query: 129 DPQTIEQLRQEGQQPV 144 + E + G + Sbjct: 129 AMKPHEIQEKLGLTRI 144 >4YLG-A nrPDB Length = 173 Score = 70.3 bits (171), Expect = 6e-13, Method: Composition-based stats. Identities = 34/170 (20%), Positives = 67/170 (39%), Gaps = 17/170 (10%) Query: 1 MSQQVGNSIRRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVEL 60 +S+ +G ++++VG A GKT +L G+ +PT+ N V+ + + Sbjct: 5 LSKLLGKK-EMRILMVGLDAAGKTSILYKLKLGEIVTT-IPTIGFN---VETVEYKNISF 59 Query: 61 ALWDTAGQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVPIILV 120 +WD GQ+ L Y ++ ++ + D + +E+ + + I+LV Sbjct: 60 TVWDVGGQDKIRPLWRHYYQNTQAIIFVVDSNDRDRIGEAREELMKMLNEDEMRNAILLV 119 Query: 121 -GCKVDLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTG 169 K DL E + G Q + +++ Y + S T Sbjct: 120 FANKHDLPQAMSISEVTEKLGLQTIKNRK-----------WYCQTSCATN 158 >3LRP-A nrPDB Length = 181 Score = 70.3 bits (171), Expect = 6e-13, Method: Composition-based stats. Identities = 29/134 (21%), Positives = 56/134 (41%), Gaps = 5/134 (3%) Query: 12 KLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDTAGQEDY 71 ++++VG A GKT +L G+ +PT+ N V+ R + +WD GQ+ Sbjct: 19 RILMVGLDAAGKTTILYKVKLGEVVTT-IPTIGFN---VETVEFRNISFTVWDVGGQDKI 74 Query: 72 DRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVPIILV-GCKVDLRNDP 130 L Y +++ ++ + + +++ +E+ + IILV K DL N Sbjct: 75 RPLWRHYYSNTDGLIFVVDSNDRERIDDAREELHRMINEEELKDAIILVFANKQDLPNAM 134 Query: 131 QTIEQLRQEGQQPV 144 E + + Sbjct: 135 SAAEVTEKLHLNTI 148 >6BBQ-A nrPDB Length = 520 Score = 68.4 bits (166), Expect = 2e-12, Method: Composition-based stats. Identities = 26/136 (19%), Positives = 53/136 (38%), Gaps = 5/136 (3%) Query: 10 RRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDTAGQE 69 +++++G A GKT +L GQ +PTV N V + V+ +WD G + Sbjct: 359 EMRILMLGLDAAGKTTILYKLKLGQSVTT-IPTVGFN---VETVTYKNVKFNVWDVGGLD 414 Query: 70 DYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVL-HFCQGVPIILVGCKVDLRN 128 L Y + ++ D ++ +++ + + I++ K DL + Sbjct: 415 KIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRDAIILIFANKQDLPD 474 Query: 129 DPQTIEQLRQEGQQPV 144 + E + G + Sbjct: 475 AMKPHEIQEKLGLTRI 490 >5NZV-F nrPDB Length = 181 Score = 68.0 bits (165), Expect = 3e-12, Method: Composition-based stats. Identities = 25/137 (18%), Positives = 51/137 (37%), Gaps = 7/137 (5%) Query: 10 RRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDTAGQE 69 ++++VG GKT +L G+ +PT+ N V + + +WD GQ+ Sbjct: 17 EMRILMVGLDGAGKTTVLYKLKLGEVITT-IPTIGFN---VETVQYKNISFTVWDVGGQD 72 Query: 70 DYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQ--GVPIILVGCKVDLR 127 L Y ++ V+ + + +E + +L+ + ++ K DL Sbjct: 73 RIRSLWRHYYRNTEGVIFVVDSNDRSRIGEAREV-MQRMLNEDELRNAAWLVFANKQDLP 131 Query: 128 NDPQTIEQLRQEGQQPV 144 E + G + Sbjct: 132 EAMSAAEITEKLGLHSI 148 >1Z6X-A nrPDB Length = 180 Score = 68.0 bits (165), Expect = 3e-12, Method: Composition-based stats. Identities = 25/130 (19%), Positives = 55/130 (42%), Gaps = 5/130 (3%) Query: 10 RRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDTAGQE 69 + ++++VG A GKT +L G+ +PT+ N V+ + + +WD GQ+ Sbjct: 17 QMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFN---VETVEYKNICFTVWDVGGQD 72 Query: 70 DYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVL-HFCQGVPIILVGCKVDLRN 128 L + ++ ++ + + ++ V ++ +L + ++L K DL N Sbjct: 73 RIRPLWKHYFQNTQGLIFVVDSNDRERIQEVADELQKMLLVDELRDAVLLLFANKQDLPN 132 Query: 129 DPQTIEQLRQ 138 E + Sbjct: 133 AMAISEMTDK 142 >3O47-A nrPDB Length = 329 Score = 66.5 bits (161), Expect = 7e-12, Method: Composition-based stats. Identities = 25/130 (19%), Positives = 53/130 (40%), Gaps = 5/130 (3%) Query: 10 RRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDTAGQE 69 ++++VG A GKT +L G+ +PT+ N V+ + + +WD GQ+ Sbjct: 165 EMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFN---VETVEYKNISFTVWDVGGQD 220 Query: 70 DYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVPIILV-GCKVDLRN 128 L + ++ ++ + + + +E+ + + ++LV K DL N Sbjct: 221 KIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPN 280 Query: 129 DPQTIEQLRQ 138 E + Sbjct: 281 AMNAAEITDK 290 >6FAE-B nrPDB Length = 213 Score = 66.1 bits (160), Expect = 1e-11, Method: Composition-based stats. Identities = 25/129 (19%), Positives = 53/129 (41%), Gaps = 5/129 (3%) Query: 11 RKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDTAGQED 70 ++++VG A GKT +L G+ +PT+ N V+ + + +WD GQ+ Sbjct: 50 MRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFN---VETVEYKNISFTVWDVGGQDK 105 Query: 71 YDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVPIILV-GCKVDLRND 129 L + ++ ++ + + + +E+ + + ++LV K DL N Sbjct: 106 IRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPNA 165 Query: 130 PQTIEQLRQ 138 E + Sbjct: 166 MNAAEITDK 174 >6DFF-C nrPDB Length = 193 Score = 65.3 bits (158), Expect = 2e-11, Method: Composition-based stats. Identities = 25/136 (18%), Positives = 53/136 (38%), Gaps = 5/136 (3%) Query: 4 QVGNSIRRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALW 63 Q ++++VG A GKT +L G+ +PT+ N V+ + + +W Sbjct: 23 QGAMGSEMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFN---VETVEYKNISFTVW 78 Query: 64 DTAGQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVPIILV-GC 122 D G + L + ++ ++ + + + +E+ + + ++LV Sbjct: 79 DVGGLDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFAN 138 Query: 123 KVDLRNDPQTIEQLRQ 138 K DL N E + Sbjct: 139 KQDLPNAMNAAEITDK 154 >3AQ4-A nrPDB Length = 184 Score = 64.9 bits (157), Expect = 2e-11, Method: Composition-based stats. Identities = 25/130 (19%), Positives = 52/130 (40%), Gaps = 5/130 (3%) Query: 10 RRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDTAGQE 69 ++++VG A GKT +L G+ +PT+ N V+ + + +WD GQ+ Sbjct: 20 EMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFN---VETVEYKNISFTVWDVGGQD 75 Query: 70 DYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVPIILV-GCKVDLRN 128 L + ++ ++ + D + +++ + ++LV K DL N Sbjct: 76 KIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPN 135 Query: 129 DPQTIEQLRQ 138 E + Sbjct: 136 AMNAAEITDK 145 >4ZI3-A nrPDB Length = 190 Score = 64.1 bits (155), Expect = 4e-11, Method: Composition-based stats. Identities = 32/185 (17%), Positives = 63/185 (34%), Gaps = 15/185 (8%) Query: 4 QVGNSIRRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALW 63 + +++++G GKT LL + + PT N + V + +L +W Sbjct: 11 KSAPDQEVRILLLGLDNAGKTTLLKQLAS-EDISHITPTQGFNIKS---VQSQGFKLNVW 66 Query: 64 DTAGQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQG-VPIILVGC 122 D GQ + ++++++ E ++ + VP+++ Sbjct: 67 DIGGQRKIRPYWRSYFENTDILIYVIDSADRKRFEETGQELTELLEEEKLSCVPVLIFAN 126 Query: 123 KVDLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRA 182 K DL E + + QI + CSA TG GV++ + Sbjct: 127 KQDLLTAAPASEIAEGLNLHTI-----RDRVWQIQS-----CSALTGEGVQDGMNWVCKN 176 Query: 183 SLMGK 187 K Sbjct: 177 VNAKK 181 >5UF8-A nrPDB Length = 181 Score = 63.8 bits (154), Expect = 5e-11, Method: Composition-based stats. Identities = 27/136 (19%), Positives = 54/136 (39%), Gaps = 5/136 (3%) Query: 10 RRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDTAGQE 69 ++++VG A GKT +L G+ +PT+ N V+ + + +WD GQ+ Sbjct: 17 EMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFN---VETVEYKNISFTVWDVGGQD 72 Query: 70 DYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVPIILV-GCKVDLRN 128 L + ++ ++ + D + +E+ + ++LV K DL N Sbjct: 73 KIRPLWRYYFQNTQGIIFVVDSNDRDRIAEAREELQQMLNEDELRDALLLVFANKQDLPN 132 Query: 129 DPQTIEQLRQEGQQPV 144 E + G + Sbjct: 133 AMNAAEITEKLGLHSI 148 >2B6H-A nrPDB Length = 192 Score = 63.4 bits (153), Expect = 6e-11, Method: Composition-based stats. Identities = 26/134 (19%), Positives = 55/134 (41%), Gaps = 13/134 (9%) Query: 10 RRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDTAGQE 69 + ++++VG A GKT +L G+ +PT+ N V+ + + +WD GQ+ Sbjct: 29 QMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFN---VETVEYKNICFTVWDVGGQD 84 Query: 70 DYDRLRPLSYPDSNVVLICFSIDLP----DSLENVQEKWIAEVLHFCQGVPIILV-GCKV 124 L + ++ ++ + +S + +Q+ + L ++LV K Sbjct: 85 KIRPLWRHYFQNTQGLIFVVDSNDRERVQESADELQKMLQEDELRDA----VLLVFANKQ 140 Query: 125 DLRNDPQTIEQLRQ 138 D+ N E + Sbjct: 141 DMPNAMPVSELTDK 154 >1MOZ-A nrPDB Length = 183 Score = 63.4 bits (153), Expect = 8e-11, Method: Composition-based stats. Identities = 33/179 (18%), Positives = 62/179 (34%), Gaps = 15/179 (8%) Query: 6 GNSIRRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDT 65 G++ +++I+G GKT +L G+ PT+ N + + ++L +WD Sbjct: 14 GSNKELRILILGLDGAGKTTILYRLQIGEVVTT-KPTIGFN---VETLSYKNLKLNVWDL 69 Query: 66 AGQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVL-HFCQGVPIILVGCKV 124 GQ Y D+ V+ D + ++ + Q +++ K Sbjct: 70 GGQTSIRPYWRCYYADTAAVIFVVDSTDKDRMSTASKELHLMLQEEELQDAALLVFANKQ 129 Query: 125 DLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRAS 183 D Q E + + E + + I A SA G G+ E + Sbjct: 130 D-----QPGALSASEVSKELNLVELKDRSWSIVA-----SSAIKGEGITEGLDWLIDVI 178 >5EE5-B nrPDB Length = 171 Score = 63.0 bits (152), Expect = 8e-11, Method: Composition-based stats. Identities = 30/186 (16%), Positives = 59/186 (31%), Gaps = 35/186 (18%) Query: 8 SIRRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDTAG 67 + +++I+G GKT +L G+ +PT+ N V + ++ +WD G Sbjct: 5 TREMRILILGLDGAGKTTILYRLQVGEVVTT-IPTIGFN---VETVTYKNLKFQVWDLGG 60 Query: 68 QEDYDRLRPLSYPDSNVVLICFSIDLPD----SLENVQEKWIAEVLHFCQGVPIILVGCK 123 Y +++ V+ D S + E L +++ K Sbjct: 61 LTSIRPYWRCYYSNTDAVIYVVDSCDRDRIGISKSELVAMLEEEELRKA---ILVVFANK 117 Query: 124 VDLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGY-------YECSAKTGYGVREVF 176 D+ + +A+ +G ++ SA G G+ E Sbjct: 118 QDMEQAMTSS-----------------EMANSLGLPALKDRKWQIFKTSATKGTGLDEAM 160 Query: 177 EAATRA 182 E Sbjct: 161 EWLVET 166 >1J2J-A nrPDB Length = 166 Score = 63.0 bits (152), Expect = 1e-10, Method: Composition-based stats. Identities = 24/129 (18%), Positives = 52/129 (40%), Gaps = 5/129 (3%) Query: 11 RKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDTAGQED 70 ++++VG A GKT +L G+ +PT+ N V+ + + +WD G + Sbjct: 3 MRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFN---VETVEYKNISFTVWDVGGLDK 58 Query: 71 YDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVPIILV-GCKVDLRND 129 L + ++ ++ + + + +E+ + + ++LV K DL N Sbjct: 59 IRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPNA 118 Query: 130 PQTIEQLRQ 138 E + Sbjct: 119 MNAAEITDK 127 >1KSG-A nrPDB Length = 186 Score = 61.8 bits (149), Expect = 2e-10, Method: Composition-based stats. Identities = 24/122 (19%), Positives = 48/122 (39%), Gaps = 5/122 (4%) Query: 7 NSIRRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDTA 66 +L+++G GKT +L F G+ + PT+ N ++ R +L +WD Sbjct: 15 KERELRLLMLGLDNAGKTTILKKF-NGEDVDTISPTLGFNIK---TLEHRGFKLNIWDVG 70 Query: 67 GQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQ-EKWIAEVLHFCQGVPIILVGCKVD 125 GQ+ + ++ ++ +++ Q E V G +++ K D Sbjct: 71 GQKSLRSYWRNYFESTDGLIWVVDSADRQRMQDCQRELQSLLVEERLAGATLLIFANKQD 130 Query: 126 LR 127 L Sbjct: 131 LP 132 >4C0K-A nrPDB Length = 423 Score = 60.7 bits (146), Expect = 5e-10, Method: Composition-based stats. Identities = 29/145 (20%), Positives = 57/145 (39%), Gaps = 8/145 (5%) Query: 1 MSQQVGNSIRRKLVIVGDGACGKTCLLIVFS---KGQFPEVYVPTVFENYVADVEVDGRR 57 ++++ + K ++G GKT + F + T N + V+V G+ Sbjct: 237 LAKRQSSRSVYKCHVIGPKGSGKTGMCRGFLVEDMHKLIGKEFKTNVVNCINSVQVYGQE 296 Query: 58 VELALWDTAGQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQG-VP 116 L L D + D L+P + +V + + P S E V + + ++ + +P Sbjct: 297 KHLILRDIDVRHALDPLQPQEV-NCDVACLVYDSSNPRSFEYVARIY---IKYYAESKIP 352 Query: 117 IILVGCKVDLRNDPQTIEQLRQEGQ 141 +++VG K D+ Q E Sbjct: 353 VMIVGTKCDMDERRQDYLMQPSEFC 377 >3BH6-A nrPDB Length = 164 Score = 60.3 bits (145), Expect = 6e-10, Method: Composition-based stats. Identities = 30/175 (17%), Positives = 60/175 (34%), Gaps = 15/175 (8%) Query: 10 RRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDTAGQE 69 +++++G GKT LL + + PT N + V + +L +WD G Sbjct: 4 EVRILLLGLDNAGKTTLLKQLAS-EDISHITPTQGFNIKS---VQSQGFKLNVWDIGGLR 59 Query: 70 DYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQG-VPIILVGCKVDLRN 128 + ++++++ E ++ + VP+++ K DL Sbjct: 60 KIRPYWRSYFENTDILIYVIDSADRKRFEETGQELTELLEEEKLSCVPVLIFANKQDLLT 119 Query: 129 DPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRAS 183 E + + QI + CSA TG GV++ + Sbjct: 120 AAPASEIAEGLNLHTI-----RDRVWQIQS-----CSALTGEGVQDGMNWVCKNV 164 >5DE3-A nrPDB Length = 169 Score = 58.0 bits (139), Expect = 3e-09, Method: Composition-based stats. Identities = 40/176 (22%), Positives = 70/176 (39%), Gaps = 21/176 (11%) Query: 12 KLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDTAGQEDY 71 +++++G GKT +L S+ + PT N + + DG L +WD GQ+ Sbjct: 2 RILVLGLDNAGKTTILKALSE-EDITTITPTQGFN-IKSLSRDG--FNLKIWDIGGQKSI 57 Query: 72 DRLRPLSYPDSNVVLICFSIDLPDSLENVQEK--WIAEVLHFCQ--GVPIILVGCKVDLR 127 + ++ + + ID DS + + E + E+L + GVP+++ K DL Sbjct: 58 RPYWRNYFDQTDA--LIYVIDSADS-KRLSESEFELTELLQEEKMTGVPLLVFANKQDLV 114 Query: 128 NDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRAS 183 E + + Q A CSAK G G++E E + Sbjct: 115 GALAADEIASTLDLTSIRDRPWQIQA----------CSAKQGTGLKEGMEWMMKQV 160 >2H57-A nrPDB Length = 190 Score = 58.0 bits (139), Expect = 3e-09, Method: Composition-based stats. Identities = 21/134 (15%), Positives = 49/134 (36%), Gaps = 11/134 (8%) Query: 7 NSIRRKLVIVGDGACGKTCLLIVFS-KGQFPEVYVPTVFENYVADVEVDGRRVELALWDT 65 S ++ +G GKT ++ + +PT+ + + ++D Sbjct: 18 GSKEVHVLCLGLDNSGKTTIINKLKPSNAQSQNILPTIGFSIEK---FKSSSLSFTVFDM 74 Query: 66 AGQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKW-----IAEVLHFCQGVPIILV 120 +GQ Y L Y + ++ + +E+ ++ H +PI+ Sbjct: 75 SGQGRYRNLWEHYYKEGQAIIFVIDSSDRLRMVVAKEELDTLLNHPDIKHR--RIPILFF 132 Query: 121 GCKVDLRNDPQTIE 134 K+DLR+ +++ Sbjct: 133 ANKMDLRDAVTSVK 146 >4V0N-A nrPDB Length = 169 Score = 57.2 bits (137), Expect = 4e-09, Method: Composition-based stats. Identities = 30/129 (23%), Positives = 53/129 (41%), Gaps = 13/129 (10%) Query: 5 VGNSIRRKLVIVGDGACGKTCLLIVFS-KGQFPEVYVPTVFENYVADVEVDGRRVELALW 63 S + +++VG GKT ++ + + PTV + D EV+ + ++ Sbjct: 1 GAASKKVNVLVVGLDNSGKTTIIERLKPRPRQAAEVAPTVG--FTVD-EVEKGPLTFTVF 57 Query: 64 DTAGQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQG-----VPII 118 D +G Y L Y +++ + F +D D L V + E+ H + VPI+ Sbjct: 58 DMSGAGRYRTLWEQYYREADA--VVFVVDSADKLRMVVAR--DEMEHMLKHSNMRKVPIL 113 Query: 119 LVGCKVDLR 127 K DL Sbjct: 114 YFANKKDLP 122 >4ARZ-A nrPDB Length = 310 Score = 56.1 bits (134), Expect = 1e-08, Method: Composition-based stats. Identities = 25/157 (15%), Positives = 67/157 (42%), Gaps = 14/157 (8%) Query: 5 VGNSIRRKLVIVGDGACGKTCLLIVFSKG--QFPE-VYVPTVFENYVADVEVDGRRVELA 61 + ++ R+KL+++G GK+ + + F T+ + + + L Sbjct: 1 MSSNNRKKLLLMGRSGSGKSSMRSIIFSNYSAFDTRRLGATIDVEHSHLRFLGN--MTLN 58 Query: 62 LWDTAGQE-----DYDRLRPLSYPDSNVVLICFSIDLPDSLENVQ--EKWIAEVLHFCQG 114 LWD GQ+ + + + + V++ F ++ + L++++ K + ++ + Sbjct: 59 LWDCGGQDVFMENYFTKQKDHIFQMVQVLIHVFDVESTEVLKDIEIFAKALKQLRKYSPD 118 Query: 115 VPIILVGCKVDLR--NDPQTIEQLRQEGQQPVTSQEG 149 I ++ K+DL + + + Q+ + +S+ G Sbjct: 119 AKIFVLLHKMDLVQLDKREELFQIMMKNLSETSSEFG 155 >2LKD-A nrPDB Length = 178 Score = 55.3 bits (132), Expect = 2e-08, Method: Composition-based stats. Identities = 44/184 (23%), Positives = 67/184 (36%), Gaps = 22/184 (11%) Query: 13 LVIVGDGACGKTCLL--IVFSKGQFPEVYVPT--VFENYVADVEVDGRRVELALWDTAGQ 68 + I+G GKT LL I SK E T + V V+ +++ DT G Sbjct: 11 VTIMGHVDHGKTTLLDAIRHSKVTEQEAGGITQHIGA---YQVTVNDKKITF--LDTPGH 65 Query: 69 EDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLH-FCQGVPIILVGCKVDLR 127 E + +R + V I + D + V + + + H VPII+ K+D Sbjct: 66 EAFTTMRA---RGAQVTDIVILVVAAD--DGVMPQTVEAINHAKAANVPIIVAINKMDKP 120 Query: 128 NDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRASLMGK 187 V + G G T + + SAKT G+ + E S M + Sbjct: 121 EANPDRVMQELMEYNLVPEEWG-------GDTIFCKLSAKTKEGLDHLLEMILLVSEMEE 173 Query: 188 SKTN 191 K N Sbjct: 174 LKAN 177 >6CES-A nrPDB Length = 313 Score = 53.7 bits (128), Expect = 5e-08, Method: Composition-based stats. Identities = 23/151 (15%), Positives = 60/151 (39%), Gaps = 14/151 (9%) Query: 8 SIRRKLVIVGDGACGKTCLLIVFSKG---QFPEVYVPTVFENYVADVEVDGRRVELALWD 64 ++++K++++G GKT + + + T+ + + + L LWD Sbjct: 5 AMKKKVLLMGKSGSGKTSMRSIIFANYIARDTRRLGATIDVEHSHVRFLGN--LVLNLWD 62 Query: 65 TAGQE-----DYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKW--IAEVLHFCQGVPI 117 GQ+ + R + + V++ F ++ + +++ + +L I Sbjct: 63 CGGQDTFMENYFTSQRDNIFRNVEVLIYVFDVESRELEKDMHYYQSCLEAILQNSPDAKI 122 Query: 118 ILVGCKVDL--RNDPQTIEQLRQEGQQPVTS 146 + K+DL + I + R+E + ++ Sbjct: 123 FCLVHKMDLVQEDQRDLIFKEREEDLRRLSR 153 >2GAO-A nrPDB Length = 208 Score = 53.0 bits (126), Expect = 1e-07, Method: Composition-based stats. Identities = 38/173 (21%), Positives = 63/173 (36%), Gaps = 9/173 (5%) Query: 12 KLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDTAGQEDY 71 KLV +G GKT LL + + +VPT+ ++ + G + +D G E Sbjct: 37 KLVFLGLDNAGKTTLLHMLKDDR-LGQHVPTLHPT-SEELTIAG--MTFTTFDLGGHEQA 92 Query: 72 DRLRPLSYPDSNVVLICFSIDLPDSL-ENVQEKWIAEVLHFCQGVPIILVGCKVDLRNDP 130 R+ P N ++ L E+ E VPI+++G K+D + Sbjct: 93 RRVWKNYLPAINGIVFLVDCADHSRLVESKVELNALMTDETISNVPILILGNKIDRTDAI 152 Query: 131 QTIEQLRQEGQQPVTSQEGQSVADQIGATGYYE---CSAKTGYGVREVFEAAT 180 + G T+ +G ++ A E CS G E F + Sbjct: 153 SEEKLREIFGLYGQTTGKGNVTLKELNARP-MEVFMCSVLKRQGYGEGFRWLS 204 >2YWH-A nrPDB Length = 600 Score = 52.2 bits (124), Expect = 1e-07, Method: Composition-based stats. Identities = 37/198 (18%), Positives = 58/198 (29%), Gaps = 35/198 (17%) Query: 22 GKTCLLIVF-------SKGQFPEVYVPTVFENYVADVEV------------DGRRVELAL 62 GK+ L S+ + E + T+ + V DG +L L Sbjct: 18 GKSTLADRLLEYTGAISEREKREQLLDTLDVERERGITVKMQAVRMFYKAKDGNTYKLHL 77 Query: 63 WDTAGQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVPIILVGC 122 DT G D+ + L+ + V W Q + II V Sbjct: 78 IDTPGHVDFSYEVSRALAACEGALLLIDASQGIEAQTVANFW----KAVEQDLVIIPVIN 133 Query: 123 KVDLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRA 182 K+DL + + + E + +E SAK G G+ E+ EA Sbjct: 134 KIDLPSADVDRVKKQIEEVLGLDPEEA------------ILASAKEGIGIEEILEAIVNR 181 Query: 183 SLMGKSKTNGKAKKNTTE 200 K K + Sbjct: 182 IPPPKGDPQKPLKALIFD 199 >2GJ9-A nrPDB Length = 172 Score = 51.4 bits (122), Expect = 3e-07, Method: Composition-based stats. Identities = 29/150 (19%), Positives = 55/150 (36%), Gaps = 13/150 (8%) Query: 11 RKLVIVGDGACGKTCLLIVFSKGQ--FPEVYVPTVFENYVADVEVDGRRVELALWDTAGQ 68 K+VI G GK+ LL + + T + + +DG L + DTAG Sbjct: 5 MKVVIAGRPNAGKSSLLNALAGREAAIVTDIAGTTRDVLREHIHIDGMP--LHIIDTAGL 62 Query: 69 -------EDYDRLRP-LSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVPIILV 120 E R ++ VL D+++ E W + +PI +V Sbjct: 63 REASDEVERIGIERAWQEIEQADRVLFMVDGTTTDAVDPA-EIWPEFIARLPAKLPITVV 121 Query: 121 GCKVDLRNDPQTIEQLRQEGQQPVTSQEGQ 150 K D+ + + ++ ++++ G+ Sbjct: 122 RNKADITGETLGMSEVNGHALIRLSARTGE 151 >6GNI-B nrPDB Length = 167 Score = 50.3 bits (119), Expect = 5e-07, Method: Composition-based stats. Identities = 35/173 (20%), Positives = 62/173 (35%), Gaps = 14/173 (8%) Query: 12 KLVIVGDGACGKTCLLIVFSKGQFP---EVYVPTVFENYVADVEVDGRRVELALWDTAGQ 68 KL+ +G GKT LL + + + PT E + ++ +D G Sbjct: 3 KLLFLGLDNAGKTTLLHMLKNDRLATLQPTWHPTSEELAI-------GNIKFTTFDLGGH 55 Query: 69 EDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEV-LHFCQGVPIILVGCKVDLR 127 RL +P+ N ++ P+ + + + A + + VP +++G K+D Sbjct: 56 IQARRLWKDYFPEVNGIVFLVDAADPERFDEARVELDALFNIAELKDVPFVILGNKIDAP 115 Query: 128 NDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAAT 180 N E G T Q + Q + CS G E F+ + Sbjct: 116 NAVSEAELRSALGLLNTTGS--QRIEGQRPVEVFM-CSVVMRNGYLEAFQWLS 165 >1M2O-B nrPDB Length = 190 Score = 50.3 bits (119), Expect = 5e-07, Method: Composition-based stats. Identities = 35/173 (20%), Positives = 62/173 (35%), Gaps = 14/173 (8%) Query: 12 KLVIVGDGACGKTCLLIVFSKGQFP---EVYVPTVFENYVADVEVDGRRVELALWDTAGQ 68 KL+ +G GKT LL + + + PT E + ++ +D G Sbjct: 25 KLLFLGLDNAGKTTLLHMLKNDRLATLQPTWHPTSEELAI-------GNIKFTTFDLGGH 77 Query: 69 EDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEV-LHFCQGVPIILVGCKVDLR 127 RL +P+ N ++ P+ + + + A + + VP +++G K+D Sbjct: 78 IQARRLWKDYFPEVNGIVFLVDAADPERFDEARVELDALFNIAELKDVPFVILGNKIDAP 137 Query: 128 NDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAAT 180 N E G T Q + Q + CS G E F+ + Sbjct: 138 NAVSEAELRSALGLLNTTGS--QRIEGQRPVEVFM-CSVVMRNGYLEAFQWLS 187 >3GEH-A nrPDB Length = 462 Score = 49.9 bits (118), Expect = 7e-07, Method: Composition-based stats. Identities = 34/158 (21%), Positives = 53/158 (33%), Gaps = 33/158 (20%) Query: 12 KLVIVGDGACGKTCLLIVF--SKGQFPEVYVPTVFENYVADVEVDGRRVELALWDTAG-- 67 K+ IVG GK+ LL + S T + + + V G V + DTAG Sbjct: 226 KVAIVGRPNVGKSSLLNAWSQSDRAIVTDLPGTTRDVVESQLVVGGIPV--QVLDTAGIR 283 Query: 68 ----Q------EDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWI---AEVLHFCQG 114 Q E + +++VL+ W E+ + Sbjct: 284 ETSDQVEKIGVERSRQAAN----TADLVLLTID---------AATGWTTGDQEIYEQVKH 330 Query: 115 VPIILVGCKVDLRNDPQ-TIEQLRQEGQQPVTSQEGQS 151 P+ILV K+DL T + + Q V + Q Sbjct: 331 RPLILVMNKIDLVEKQLITSLEYPENITQIVHTAAAQK 368 >1F6B-A nrPDB Length = 198 Score = 49.9 bits (118), Expect = 9e-07, Method: Composition-based stats. Identities = 39/175 (22%), Positives = 64/175 (36%), Gaps = 13/175 (7%) Query: 12 KLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDTAGQEDY 71 KLV +G GKT LL + + +VPT+ ++ + G + +D G Sbjct: 27 KLVFLGLDNAGKTTLLHMLKDDR-LGQHVPTLHPT-SEELTIAG--MTFTTFDLGGHIQA 82 Query: 72 DRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQ---GVPIILVGCKVDLRN 128 R+ P N I F +D D ++ K + L + VPI+++G K+D Sbjct: 83 RRVWKNYLPAING--IVFLVDCADHERLLESKEELDSLMTDETIANVPILILGNKIDRPE 140 Query: 129 DPQTIEQLRQEGQQPVTSQEGQSVADQIGATG---YYECSAKTGYGVREVFEAAT 180 G T+ +G ++ A + CS G E F Sbjct: 141 AISEERLREMFGLYGQTTGKGSVSLKELNARPLEVFM-CSVLKRQGYGEGFRWMA 194 >3J8G-X nrPDB Length = 490 Score = 48.7 bits (115), Expect = 2e-06, Method: Composition-based stats. Identities = 45/203 (22%), Positives = 76/203 (37%), Gaps = 36/203 (17%) Query: 8 SIRRKLVIVGDGACGKTCLLIVFSKGQFPEVYV--PTVFENYVADVEVDGRRVELALWDT 65 S+ KL IVG GK+ L + VY T ++ +E DGR L DT Sbjct: 200 SLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPMERDGREYVLI--DT 257 Query: 66 AG----------QEDYDRLRPLS-YPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQG 114 AG E + ++ L D+NVV++ S +++ + + Sbjct: 258 AGVRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAREGISDQDLS---LLGFILNSGR 314 Query: 115 VPIILVGCKVDLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYE---CSAKTGYG 171 +I+V K D Q V Q +++ ++G + SA G G Sbjct: 315 SLVIVV-NKWD-------------GLSQEVKEQVKETLDFRLGFIDFARVHFISALHGSG 360 Query: 172 VREVFEAATRASLMGKSKTNGKA 194 V +FE+ R + ++ G + Sbjct: 361 VGNLFES-VREAYDSSTRRVGTS 382 Score = 31.8 bits (71), Expect = 0.23, Method: Composition-based stats. Identities = 28/142 (19%), Positives = 48/142 (33%), Gaps = 16/142 (11%) Query: 13 LVIVGDGACGKTCLLIVF--SKGQFPEVYVPTVFENYVADVEVDGRRVELALWDTA---G 67 + +VG GK+ L ++ + + E++GR + + DT G Sbjct: 5 VALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREF-ICI-DTGGIDG 62 Query: 68 QEDYDRLRPLS-----YPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVPIILVGC 122 ED R +++VVL F +D L E + + P LV Sbjct: 63 TEDGVETRMAEQSLLAIEEADVVL--FMVDARAGLMPADEAIAKHLRSREK--PTFLVAN 118 Query: 123 KVDLRNDPQTIEQLRQEGQQPV 144 K D + Q + G + Sbjct: 119 KTDGLDPDQAVVDFYSLGLGEI 140 >2X77-A nrPDB Length = 189 Score = 47.6 bits (112), Expect = 4e-06, Method: Composition-based stats. Identities = 31/176 (17%), Positives = 59/176 (33%), Gaps = 15/176 (8%) Query: 10 RRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDTAGQE 69 + +++++G GKT +L G V TV V + + + +WD GQ Sbjct: 22 KIRVLMLGLDNAGKTSILYRLHLG----DVVTTVPTVGVNLETLQYKNISFEVWDLGGQT 77 Query: 70 DYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVPIILV-GCKVDLRN 128 + D++ V+ D + + + A + ++L+ K DL + Sbjct: 78 GVRPYWRCYFSDTDAVIYVVDSTDRDRMGVAKHELYALLDEDELRKSLLLIFANKQDLPD 137 Query: 129 DPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRASL 184 E Q G + + S+KTG G+ E + Sbjct: 138 AASEAEIAEQLGVSSI-------MNRTWTIVK---SSSKTGDGLVEGMDWLVERLR 183 >2DYK-A nrPDB Length = 161 Score = 46.8 bits (110), Expect = 7e-06, Method: Composition-based stats. Identities = 30/127 (23%), Positives = 45/127 (35%), Gaps = 19/127 (14%) Query: 10 RRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDTAG-- 67 K+VIVG GK+ L K + V + + V+ R L DT G Sbjct: 1 MHKVVIVGRPNVGKSSLFNRLLKKRSAVVADVPGVTRDLKEGVVETDRGRFLLVDTGGLW 60 Query: 68 ---------QEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVPII 118 QE DR + ++ F++D L + + + P+I Sbjct: 61 SGDKWEKKIQEKVDRALE------DAEVVLFAVDGRAELTQADYEVAEYLRRKGK--PVI 112 Query: 119 LVGCKVD 125 LV KVD Sbjct: 113 LVATKVD 119 >3T1O-A nrPDB Length = 198 Score = 46.4 bits (109), Expect = 8e-06, Method: Composition-based stats. Identities = 49/200 (24%), Positives = 76/200 (38%), Gaps = 33/200 (16%) Query: 5 VGNSIRRKLVIVGDGACGKTC-LLIVFSK---GQFPE------VYVPTVFENYV-ADV-E 52 I K+V G G GKT L ++SK G+ E T+F +++ D+ E Sbjct: 9 ANREINFKIVYYGPGLSGKTTNLKWIYSKVPEGRKGEMVSLATEDERTLFFDFLPLDIGE 68 Query: 53 VDGRRVELALWDTAGQEDYDRLRPLSYPDSNVVLICFSID------LPDSLENVQEKWIA 106 V G + L+ GQ Y+ R L + ++ +S+ N++E +A Sbjct: 69 VKGFKTRFHLYTVPGQVFYNASRKLILRGVDGIVFVADSAPNRLRANAESMRNMREN-LA 127 Query: 107 EVLHFCQGVPIILVGCKVDLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSA 166 E VPI++ K DL + L E + V EG+ E A Sbjct: 128 EYGLTLDDVPIVIQVNKRDLPDA------LPVEMVRAVVDPEGK--------FPVLEAVA 173 Query: 167 KTGYGVREVFEAATRASLMG 186 G GV E + +R L Sbjct: 174 TEGKGVFETLKEVSRLVLAR 193 >5YMX-A nrPDB Length = 203 Score = 46.4 bits (109), Expect = 9e-06, Method: Composition-based stats. Identities = 34/161 (21%), Positives = 59/161 (36%), Gaps = 21/161 (13%) Query: 8 SIRRKLVIVGDGACGKTCLLIVFSKGQ-----------FPEVYVPTVFENYV--ADVEVD 54 I K+V G G CGKT L + + T+F +++ + E+ Sbjct: 10 EINCKIVYYGPGLCGKTTNL-QYIYNKTAAETKGKLISLSTETDRTLFFDFLPLSLGEIR 68 Query: 55 GRRVELALWDTAGQEDYDRLRPLSYPDSNVVLICFSI------DLPDSLENVQEKWIAEV 108 G + L+ GQ YD R L + V+ +SLEN++ +AE Sbjct: 69 GFKTRFHLYTVPGQVFYDASRKLILKGVDGVVFVADSQIERMEANMESLENLRIN-LAEQ 127 Query: 109 LHFCQGVPIILVGCKVDLRNDPQTIEQLRQEGQQPVTSQEG 149 + +P ++ K DL N E + + + + Sbjct: 128 GYDLNKIPYVIQYNKRDLPNAVTVEEMRKALNHRNIPEYQA 168 >1XZP-A nrPDB Length = 482 Score = 46.4 bits (109), Expect = 9e-06, Method: Composition-based stats. Identities = 35/203 (17%), Positives = 70/203 (34%), Gaps = 37/203 (18%) Query: 12 KLVIVGDGACGKTCLLIVFS--KGQFPEVYVPTVFENYVADVEVDGRRVELALWDTAG-- 67 ++VIVG GK+ LL T + ++ + G + + DTAG Sbjct: 245 RMVIVGKPNVGKSTLLNRLLNEDRAIVTDIPGTTRDVISEEIVIRG--ILFRIVDTAGVR 302 Query: 68 ------QEDYDRLRPLS-YPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVPIILV 120 E R L +++VL P E+ ++L + ++V Sbjct: 303 SETNDLVERLGIERTLQEIEKADIVLFVLDASSPLDEED------RKILERIKNKRYLVV 356 Query: 121 GCKVDLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYY-ECSAKTGYGVREVFEAA 179 KVD+ + + +++G + + SA G G+ ++ E+ Sbjct: 357 INKVDVVEKINE-----------------EEIKNKLGTDRHMVKISALKGEGLEKLEESI 399 Query: 180 TRASLMGKSKTNGKAKKNTTEKK 202 R + + + N +K+ Sbjct: 400 YRETQEIFERGSDSLITNLRQKQ 422 >4BAS-A nrPDB Length = 199 Score = 46.0 bits (108), Expect = 1e-05, Method: Composition-based stats. Identities = 23/129 (17%), Positives = 44/129 (34%), Gaps = 14/129 (10%) Query: 7 NSIRRKLVIVGDGACGKTCLLIVFSKGQFPEVYV-PTVFENYVADVEVDGRRVELALWDT 65 + + ++V+ G GKT ++ Q ++ TV N + RV ++D Sbjct: 14 SKTKLQVVMCGLDNSGKTTIINQVKPAQSSSKHITATVGYN---VETFEKGRVAFTVFDM 70 Query: 66 AGQEDYDRLRPLSYPDSNVVLICFSIDLP------DSLENVQEKWIAEVLHFCQG---VP 116 G + + L Y + + V+ S K ++ G VP Sbjct: 71 GGAKKFRGLWETYYDNIDAVIFVVDSSDHLRLCVVKSEIQAMLK-HEDIRRELPGGGRVP 129 Query: 117 IILVGCKVD 125 + K+D Sbjct: 130 FLFFANKMD 138 >1WF3-A nrPDB Length = 301 Score = 44.9 bits (105), Expect = 2e-05, Method: Composition-based stats. Identities = 42/203 (20%), Positives = 69/203 (33%), Gaps = 36/203 (17%) Query: 13 LVIVGDGACGKTCLLIVFSKGQFPEVY-VPTVFENYVADVEVDGRRVELALWDTAG---- 67 + IVG GK+ LL + + P + + +GRR ++ DT G Sbjct: 10 VAIVGKPNVGKSTLLNNLLGVKVAPISPRPQTTRKRLRGILTEGRR-QIVFVDTPGLHKP 68 Query: 68 ---------QEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVPII 118 QE Y+ L + N V+ + P + E+ E + VPI+ Sbjct: 69 MDALGEFMDQEVYEALADV-----NAVVWVVDLRHPPTPED--ELVARALKPLVGKVPIL 121 Query: 119 LVGCKVDLRNDPQTIEQLRQE-------------GQQPVTSQEGQSVADQIGATGYY-EC 164 LVG K+D P+ + E ++ V + +A +Y E Sbjct: 122 LVGNKLDAAKYPEEAMKAYHELLPEAEPRMLSALDERQVAELKADLLALMPEGPFFYPED 181 Query: 165 SAKTGYGVREVFEAATRASLMGK 187 AK+ E R M + Sbjct: 182 YAKSDQTFGEWVAEILREEAMKR 204 >5IMR-C nrPDB Length = 610 Score = 44.5 bits (104), Expect = 3e-05, Method: Composition-based stats. Identities = 36/186 (19%), Positives = 56/186 (30%), Gaps = 35/186 (18%) Query: 22 GKTCLLIVF-------SKGQFPEVYVPTVFENYVADVEV------------DGRRVELAL 62 GK+ L S + E ++ ++ + + DG L Sbjct: 21 GKSTLADRILELTHAVSDREMREQFLDSLELERERGITIKASAVRVTYRAKDGEEYVFHL 80 Query: 63 WDTAGQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVPIILVGC 122 DT G D+ + VL+ E + + ++ G II V Sbjct: 81 IDTPGHVDFTYEVSRALAAVEGVLLVVDASQGVEAETLAKFYM----ALEHGHVIIPVIN 136 Query: 123 KVDLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRA 182 K+DL N L E + + E S KTG GV E+ EA + Sbjct: 137 KIDLPNARPLEVALEVEEVLGLPADEA------------IFASGKTGEGVEEILEAIVQR 184 Query: 183 SLMGKS 188 K Sbjct: 185 IPPPKG 190 >5J8B-z nrPDB Length = 679 Score = 44.5 bits (104), Expect = 3e-05, Method: Composition-based stats. Identities = 36/186 (19%), Positives = 56/186 (30%), Gaps = 35/186 (18%) Query: 22 GKTCLLIVF-------SKGQFPEVYVPTVFENYVADVEV------------DGRRVELAL 62 GK+ L S + E ++ ++ + + DG L Sbjct: 90 GKSTLADRILELTHAVSDREMREQFLDSLELERERGITIKASAVRVTYRAKDGEEYVFHL 149 Query: 63 WDTAGQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVPIILVGC 122 DT G D+ + VL+ E + + ++ G II V Sbjct: 150 IDTPGHVDFTYEVSRALAAVEGVLLVVDASQGVEAETLAKFYM----ALEHGHVIIPVIN 205 Query: 123 KVDLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRA 182 K+DL N L E + + E S KTG GV E+ EA + Sbjct: 206 KIDLPNARPLEVALEVEEVLGLPADEA------------IFASGKTGEGVEEILEAIVQR 253 Query: 183 SLMGKS 188 K Sbjct: 254 IPPPKG 259 >5DN8-A nrPDB Length = 446 Score = 44.1 bits (103), Expect = 4e-05, Method: Composition-based stats. Identities = 35/181 (19%), Positives = 65/181 (35%), Gaps = 29/181 (16%) Query: 12 KLVIVGDGACGKTCLLIVFSKGQFPEVYVP--TVFENYVADVEVDGRRVELALWDTAG-- 67 K+ ++G GK+ L+ + VY T ++ + L DTAG Sbjct: 180 KIAMIGRPNVGKSTLINRLLGEERVIVYDQPGTTRDSIYIPFARNDENYTLI--DTAGIR 237 Query: 68 -----Q---EDYDRLRPLS-YPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVPII 118 Q E + ++ L ++VV+ F +D + + + ++ + I Sbjct: 238 RRAKIQDYVEKFSMIKSLQAMHAADVVI--FLLDARQGVTEQDLRLLNRIVEAGVSLIIA 295 Query: 119 LVGCKVDLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEA 178 + K D L E + V + + + A Y+ SA G GV ++F A Sbjct: 296 V--NKWD---------GLNIEERDNVRNAIDRRMPFVDFARRYF-ISALHGTGVGKLFRA 343 Query: 179 A 179 Sbjct: 344 I 344 >5DI3-B nrPDB Length = 263 Score = 43.7 bits (102), Expect = 5e-05, Method: Composition-based stats. Identities = 24/118 (20%), Positives = 47/118 (39%), Gaps = 7/118 (5%) Query: 13 LVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDTAGQEDYD 72 + ++G GKT LL +G+ PT N ++ + ++ ++D G ++ Sbjct: 7 IALLGLDNAGKTTLLNS-IQGEVDRDTTPTFGFN---STTLNEGKYKIEVFDLGGGKNIR 62 Query: 73 RLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLH--FCQGVPIILVGCKVDLRN 128 + + + ++ P E + +AEVL F + PI + K DL Sbjct: 63 GVWKKYLAEVHAIVYVVDAADPGRFEESKMT-MAEVLENQFMRDKPICIFANKQDLPT 119 >6GB2-BC nrPDB Length = 657 Score = 43.7 bits (102), Expect = 6e-05, Method: Composition-based stats. Identities = 39/179 (21%), Positives = 59/179 (32%), Gaps = 23/179 (12%) Query: 13 LVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFEN-----YVADVEVDGRRVELALWDTAG 67 + I+G GKT LL F K Q V T ++ + G ++ DT G Sbjct: 113 VTIMGHVDHGKTTLLDKFRKTQVAA--VETGGITQHIGAFLVSLP-SGEKITF--LDTPG 167 Query: 68 QEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQ-GVPIILVGCKVDL 126 + +R + V I + D + V ++ + + H VPIIL K D Sbjct: 168 HAAFSAMRA---RGAQVTDIVVLVVAAD--DGVMKQTVESIQHAKDAQVPIILAVNKCDK 222 Query: 127 RNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRASLM 185 + V G G SA TG + + EA + M Sbjct: 223 AEADPEKVKKELLAYDVVCEDYG-------GDVQAVPVSALTGDNLMALAEATVALAEM 274 >4M9Q-A nrPDB Length = 227 Score = 43.7 bits (102), Expect = 6e-05, Method: Composition-based stats. Identities = 25/124 (20%), Positives = 48/124 (38%), Gaps = 7/124 (5%) Query: 13 LVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDTAGQEDYD 72 + ++G GKT LL +G+ PT N ++ + ++ ++D G ++ Sbjct: 7 IALLGLDNAGKTTLLNS-IQGEVDRDTTPTFGFN---STTLNEGKYKIEVFDLGGGKNIR 62 Query: 73 RLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLH--FCQGVPIILVGCKVDLRNDP 130 + + + ++ P E + +AEVL F + PI + K DL Sbjct: 63 GVWKKYLAEVHAIVYVVDAADPGRFEESKMT-MAEVLENQFMRDKPICIFANKQDLPTAA 121 Query: 131 QTIE 134 E Sbjct: 122 PAAE 125 >2QAG-A nrPDB Length = 361 Score = 43.3 bits (101), Expect = 6e-05, Method: Composition-based stats. Identities = 20/86 (23%), Positives = 32/86 (37%), Gaps = 10/86 (11%) Query: 3 QQVGNSIRRKLVIVGDGACGKTCLLIV-FSKGQFPEVYVPTVFENYVADVEVDGRRV--- 58 + V L++VG+ GK+ L+ F +PE +P E V+++ V Sbjct: 30 KSVKKGFEFTLMVVGESGLGKSTLINSLFLTDLYPERVIPGAAEKIERTVQIEASTVEIE 89 Query: 59 ------ELALWDTAGQEDYDRLRPLS 78 L + DT G D R Sbjct: 90 ERGVKLRLTVVDTPGYGDAINCRDCF 115 >3FTQ-A nrPDB Length = 274 Score = 43.3 bits (101), Expect = 7e-05, Method: Composition-based stats. Identities = 19/82 (23%), Positives = 30/82 (36%), Gaps = 10/82 (12%) Query: 7 NSIRRKLVIVGDGACGKTCLLIV-FSKGQFPEVYVPTVFENYVADVEVDGRRV------- 58 L++VG+ GK+ L+ F +PE +P E V+++ V Sbjct: 2 KGFEFTLMVVGESGLGKSTLINSLFLTDLYPERIIPGAAEKIERTVQIEASTVEIEERGV 61 Query: 59 --ELALWDTAGQEDYDRLRPLS 78 L + DT G D R Sbjct: 62 KLRLTVVDTPGYGDAINCRDCF 83 >3CB4-D nrPDB Length = 599 Score = 43.3 bits (101), Expect = 7e-05, Method: Composition-based stats. Identities = 39/184 (21%), Positives = 61/184 (33%), Gaps = 41/184 (22%) Query: 22 GKTCL---LIVFSKGQFPEVYVPTVFENY----VADVEV------------DGRRVELAL 62 GK+ L +I G V ++ + + DG +L Sbjct: 16 GKSTLSDRIIQICGGLSDREMEAQVLDSMDLERERGITIKAQSVTLDYKASDGETYQLNF 75 Query: 63 WDTAGQEDYDRLRPLSYPDSNVVLICFSI---DLPDSLENVQEKWIAEVLHFCQGVPIIL 119 DT G D+ S L+ +L N ++ + VP++ Sbjct: 76 IDTPGHVDFSYEVSRSLAACEGALLVVDAGQGVEAQTLANCYTAMEMDL----EVVPVL- 130 Query: 120 VGCKVDLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAA 179 K+DL E++ +E + V I AT CSAKTG GV++V E Sbjct: 131 --NKIDLP--AADPERVAEEIEDIVG----------IDATDAVRCSAKTGVGVQDVLERL 176 Query: 180 TRAS 183 R Sbjct: 177 VRDI 180 >5KU1-A nrPDB Length = 424 Score = 43.0 bits (100), Expect = 9e-05, Method: Composition-based stats. Identities = 27/138 (19%), Positives = 47/138 (34%), Gaps = 15/138 (10%) Query: 11 RKLVIVGDGACGKT----CLLIVFS--KGQFPEVYVPTVFENYVADVEVDGRRVELALWD 64 + ++G CGK+ LL + + E + N V V G+ L L D Sbjct: 243 FRCNVIGVKNCGKSGVLQALLGRNLMRQKKIREDHKSYYAIN---TVYVYGQEKYLLLHD 299 Query: 65 TAGQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVPIILVGCKV 124 + E L +VV + + + P S E + + +P ++V K Sbjct: 300 ISESE---FLTEAEIIC-DVVCLVYDVSNPKSFEYCARIFKQHFMD--SRIPCLIVAAKS 353 Query: 125 DLRNDPQTIEQLRQEGQQ 142 DL Q + + Sbjct: 354 DLHEVKQEYSISPTDFCR 371 >5LAD-A nrPDB Length = 404 Score = 42.6 bits (99), Expect = 1e-04, Method: Composition-based stats. Identities = 26/145 (17%), Positives = 49/145 (33%), Gaps = 20/145 (13%) Query: 10 RRKLVIVGDGACGKTCLLIVFSKG--QFPEVYVPTVFENYVADVEV-DGRRVELALWDTA 66 RR +V+ G GK+ + Y T + +E+ V L DT Sbjct: 9 RRYIVVAGRRNVGKSSFMNALVGQNVSIVSEYAGTTTDPVYKSMELYPVGPVTLV--DTP 66 Query: 67 GQEDYDRL--------RPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVPII 118 G +D L R + Y ++ ++ P E+ E+ +P + Sbjct: 67 GLDDVGELGRLRVEKARRVFYR-ADCGILVTD-SEPTPYEDDVVNLFKEME-----IPFV 119 Query: 119 LVGCKVDLRNDPQTIEQLRQEGQQP 143 +V K+D+ + + E + Sbjct: 120 VVVNKIDVLGEKAEELKGLYESRYE 144 >3EC1-A nrPDB Length = 369 Score = 42.6 bits (99), Expect = 1e-04, Method: Composition-based stats. Identities = 22/81 (27%), Positives = 35/81 (43%), Gaps = 11/81 (13%) Query: 103 KWIAEVLHFCQGVPIILVGCKVDLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYY 162 +I + F PI+LVG K DL +L + ++ +A+++G Sbjct: 87 SFIPGLPRFAADNPILLVGNKADLLPRSVKYPKLLRWMRR---------MAEELGLCPVD 137 Query: 163 EC--SAKTGYGVREVFEAATR 181 C SA G G+ +V EA R Sbjct: 138 VCLVSAAKGIGMAKVMEAINR 158 >5KSO-A nrPDB Length = 190 Score = 42.6 bits (99), Expect = 1e-04, Method: Composition-based stats. Identities = 27/138 (19%), Positives = 47/138 (34%), Gaps = 15/138 (10%) Query: 11 RKLVIVGDGACGKT----CLLIVFS--KGQFPEVYVPTVFENYVADVEVDGRRVELALWD 64 + ++G CGK+ LL + + E + N V V G+ L L D Sbjct: 9 FRCNVIGVKNCGKSGVLQALLGRNLMRQKKIREDHKSYYAIN---TVYVYGQEKYLLLHD 65 Query: 65 TAGQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVPIILVGCKV 124 + E L +VV + + + P S E + + +P ++V K Sbjct: 66 ISESE---FLTEAEIIC-DVVCLVYDVSNPKSFEYCARIFKQHFMD--SRIPCLIVAAKS 119 Query: 125 DLRNDPQTIEQLRQEGQQ 142 DL Q + + Sbjct: 120 DLHEVKQEYSISPTDFCR 137 >1MKY-A nrPDB Length = 439 Score = 42.6 bits (99), Expect = 1e-04, Method: Composition-based stats. Identities = 31/181 (17%), Positives = 59/181 (32%), Gaps = 28/181 (15%) Query: 12 KLVIVGDGACGKTCLLIVFSKGQ--FPEVYVPTVFENYVADVEVDGRRVELALWDTAGQE 69 K+ IVG GK+ L + T + +V +DGR+ DTAG Sbjct: 182 KVAIVGRPNVGKSTLFNAILNKERALVSPIPGTTRDPVDDEVFIDGRKYVFV--DTAGLR 239 Query: 70 DYDRLRP------LSYP------DSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVPI 117 R+ P +Y ++VV+I + ++ + + E Sbjct: 240 RKSRVEPRTVEKYSNYRVVDSIEKADVVVIVLDATQGITRQDQRMAGLMERRGRAS---- 295 Query: 118 ILVGCKVDLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFE 177 ++V K DL + + + + + SA G+ + + + Sbjct: 296 VVVFNKWDLVVHREKRYDEFTKLFRE------KLYFIDYSPLIF--TSADKGWNIDRMID 347 Query: 178 A 178 A Sbjct: 348 A 348 Score = 39.1 bits (90), Expect = 0.002, Method: Composition-based stats. Identities = 31/185 (16%), Positives = 57/185 (30%), Gaps = 40/185 (21%) Query: 13 LVIVGDGACGKTCLLIVFSKGQF--PEVYVPTVFENYVADVEVDGRRVELALWDTAG--- 67 ++IVG GK+ L K + E + VE G+ +L DT G Sbjct: 4 VLIVGRPNVGKSTLFNKLVKKKKAIVEDEEGVTRDPVQDTVEWYGKTFKLV--DTCGVFD 61 Query: 68 ------QEDYDRLRPLSYPDSNVVLICFS----IDLPDSLENVQEKWIAEVLHFCQGVPI 117 + + ++++VL I D E++ + V Sbjct: 62 NPQDIISQKMKEVTLNMIREADLVLFVVDGKRGITKED--ESLADFLRK------STVDT 113 Query: 118 ILVGCKVDLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFE 177 ILV K + +E ++ V + +G SA+ + + E Sbjct: 114 ILVANKA----------ENLREFEREVKPE-----LYSLGFGEPIPVSAEHNINLDTMLE 158 Query: 178 AATRA 182 + Sbjct: 159 TIIKK 163 >6D4G-A nrPDB Length = 271 Score = 41.8 bits (97), Expect = 2e-04, Method: Composition-based stats. Identities = 16/113 (14%), Positives = 40/113 (35%), Gaps = 19/113 (16%) Query: 83 NVVLICFSIDLP--DSLENVQEKWIAEVLHFCQGV--PIILVGCKVDLRNDPQTIEQLRQ 138 + L+ + + ++ Q K+++ + + PI++V K D + Sbjct: 163 DGFLLGIDVSRGMNRNFDD-QLKFVSNLYNQLAKTKKPIVIVLTKCD------------E 209 Query: 139 EGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRASLMGKSKTN 191 ++ + ++ + A E SA++ V F + + KT Sbjct: 210 GVERYI--RDAHTFALSKKNLQVVETSARSNVNVDLAFSTLVQLIDKSRGKTK 260 >3GEE-A nrPDB Length = 476 Score = 41.8 bits (97), Expect = 2e-04, Method: Composition-based stats. Identities = 24/119 (20%), Positives = 44/119 (36%), Gaps = 8/119 (6%) Query: 14 VIVGDGACGKTCLLIVFS-KGQFPEVYVPTVFENYVADVEVDGRRVELALWDTAGQEDYD 72 VI G GK+ LL + + ++P +Y+ + + + L DTAG + Sbjct: 237 VIAGKPNAGKSTLLNTLLGQERAIVSHMPGTTRDYIEECFIHDKT-MFRLTDTAGLREAG 295 Query: 73 ------RLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVPIILVGCKVD 125 +R + LI + +DL + + I E+ + V K+D Sbjct: 296 EEIEHEGIRRSRMKMAEADLILYLLDLGTERLDDELTEIRELKAAHPAAKFLTVANKLD 354 >3T5D-A nrPDB Length = 274 Score = 41.8 bits (97), Expect = 2e-04, Method: Composition-based stats. Identities = 16/72 (22%), Positives = 29/72 (40%), Gaps = 9/72 (12%) Query: 5 VGNSIRRKLVIVGDGACGKTCLLIV-FSKGQFPEVY-------VPTVFENYVADVEVDGR 56 +G+ L++VG+ GK+ L+ F + Y TV + +G Sbjct: 3 LGSGFEFTLMVVGESGLGKSTLINSLFLTDLYSPEYPGPSHRIKKTVQVEQSKVLIKEGG 62 Query: 57 -RVELALWDTAG 67 ++ L + DT G Sbjct: 63 VQLLLTIVDTPG 74 >6GDG-D nrPDB Length = 248 Score = 41.8 bits (97), Expect = 2e-04, Method: Composition-based stats. Identities = 22/134 (16%), Positives = 45/134 (33%), Gaps = 9/134 (6%) Query: 11 RKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDTAGQED 70 +L+++G GK+ ++ + +VD +V ++D GQ D Sbjct: 36 HRLLLLGADNSGKSTIVKQMRILHGGSGGSGGTSGIFETKFQVD--KVNFHMFDVGGQRD 93 Query: 71 YDRLRPLSYPDSNVVLICFSIDLPDSLENV----QEKWIAEVLHFCQGVPIILVGCKVDL 126 R + D ++ + L+ + W L + +IL K DL Sbjct: 94 ERRKWIQCFNDVTAIIFVVDSSDYNRLQEALNLFKSIWNNRWLR---TISVILFLNKQDL 150 Query: 127 RNDPQTIEQLRQEG 140 + + + E Sbjct: 151 LAEKVLAGKSKIED 164 >6IAE-A nrPDB Length = 223 Score = 41.4 bits (96), Expect = 3e-04, Method: Composition-based stats. Identities = 25/228 (10%), Positives = 69/228 (30%), Gaps = 41/228 (17%) Query: 3 QQVGNSIRRKLVIVGDGACGKTCLLIVF--SKGQFPEVYVPTVFENYVA-DVEVDG---- 55 + K++++G GK+ + ++ + Y T + ++ +D Sbjct: 2 AASMSDDLVKILVLGPSKSGKSTVTNFLAGTRDTPTKEYHETNPLRVLEVEIALDDTRRS 61 Query: 56 -------RRVELALWDTAGQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEV 108 ++ + LWD G + P +++ ++ F+ ++ S + + W Sbjct: 62 GRQAAGLKKAVVQLWDVGGSSKHQAGWPAIASNADGIIYVFNPEVKGSEKELL-LWYKNF 120 Query: 109 LHFCQGVPIILVGCKVDLRNDPQTIEQLRQEGQQPVTSQEGQ-SVA----------DQIG 157 + +L +D ++ + A Q+ Sbjct: 121 AL-----------NQDELDDDNNFKMRVTDGHSLIFSHHSSLPEFAVGDNAIPPMPKQLQ 169 Query: 158 ATGYYECSAKTG-YGVREVFEAATRASLMGKSKTNGKAKKNTTEKKKK 204 E S +E F+A + + + +K+++ Sbjct: 170 GIRALETSLDYQSDNFKEAFDALVEQIIASRLAAEEN---DLLQKERE 214 >4KJZ-A nrPDB Length = 473 Score = 40.3 bits (93), Expect = 6e-04, Method: Composition-based stats. Identities = 37/187 (19%), Positives = 67/187 (35%), Gaps = 18/187 (9%) Query: 13 LVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDTAGQEDYD 72 +VI+G GKT LL + + +V EV + + DT G E + Sbjct: 75 VVIMGHVDHGKTTLLD-YLRKSRIAEKEAGGITQHVGAFEVKTPQGTVVFIDTPGHEAFT 133 Query: 73 RLRPLSYPDSNVVLICFSIDL---PDSLENVQEKWIAEVLHFCQGVPIILVGCKVDLRND 129 +R +++ +I + D P + E + A +I K+DL Sbjct: 134 TIRQRGAKVADIAVIVIAADDGIMPQTEEAIAHAKAAGAK-------LIFAINKIDLPQA 186 Query: 130 PQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRASLMGKSK 189 + + + V + G G SAKTG GV+++ E + + + Sbjct: 187 DPEKVKRQLMERGFVPEEYG-------GDAIVIPISAKTGQGVQDLLEMILLLAELEDYR 239 Query: 190 TNGKAKK 196 + A+ Sbjct: 240 ADPNAEP 246 >4B44-A nrPDB Length = 363 Score = 40.3 bits (93), Expect = 7e-04, Method: Composition-based stats. Identities = 37/187 (19%), Positives = 67/187 (35%), Gaps = 18/187 (9%) Query: 13 LVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDTAGQEDYD 72 +VI+G GKT LL + + +V EV + + DT G E + Sbjct: 76 VVIMGHVDHGKTTLLD-YLRKSRIAEKEAGGITQHVGAFEVKTPQGTVVFIDTPGHEAFT 134 Query: 73 RLRPLSYPDSNVVLICFSIDL---PDSLENVQEKWIAEVLHFCQGVPIILVGCKVDLRND 129 +R +++ +I + D P + E + A +I K+DL Sbjct: 135 TIRQRGAKVADIAVIVIAADDGIMPQTEEAIAHAKAAGAK-------LIFAINKIDLPQA 187 Query: 130 PQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRASLMGKSK 189 + + + V + G G SAKTG GV+++ E + + + Sbjct: 188 DPEKVKRQLMERGFVPEEYG-------GDAIVIPISAKTGQGVQDLLEMILLLAELEDYR 240 Query: 190 TNGKAKK 196 + A+ Sbjct: 241 ADPNAEP 247 >3J4J-A nrPDB Length = 569 Score = 39.5 bits (91), Expect = 0.001, Method: Composition-based stats. Identities = 37/187 (19%), Positives = 67/187 (35%), Gaps = 18/187 (9%) Query: 13 LVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDTAGQEDYD 72 +VI+G GKT LL + + +V EV + + DT G E + Sbjct: 76 VVIMGHVDHGKTTLLD-YLRKSRIAEKEAGGITQHVGAFEVKTPQGTVVFIDTPGHEAFT 134 Query: 73 RLRPLSYPDSNVVLICFSIDL---PDSLENVQEKWIAEVLHFCQGVPIILVGCKVDLRND 129 +R +++ +I + D P + E + A +I K+DL Sbjct: 135 TIRQRGAKVADIAVIVIAADDGIMPQTEEAIAHAKAAGAK-------LIFAINKIDLPQA 187 Query: 130 PQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRASLMGKSK 189 + + + V + G G SAKTG GV+++ E + + + Sbjct: 188 DPEKVKRQLMERGFVPEEYG-------GDAIVIPISAKTGQGVQDLLEMILLLAELEDYR 240 Query: 190 TNGKAKK 196 + A+ Sbjct: 241 ADPNAEP 247 >5ZZM-A nrPDB Length = 426 Score = 39.5 bits (91), Expect = 0.001, Method: Composition-based stats. Identities = 39/199 (19%), Positives = 67/199 (33%), Gaps = 48/199 (24%) Query: 4 QVGNSIRRK-----LVIVGDGACGKTCLLIV------FSKGQFPEVYVPTVFENYVADVE 52 + G R K + +VG GK+ L ++ Q PT+ DV Sbjct: 186 EQGRQSRIKADVPTVSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTL---RRIDVA 242 Query: 53 VDGRRVELALWDTAGQEDYDRLRPL-----------SYPDSNVVLICFSIDLPDSLENVQ 101 G V L DT G + R P + ++L EN++ Sbjct: 243 DVGETV---LADTVG---FIRHLPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIE 296 Query: 102 EKWIAEVLHFCQGVPIILVGCKVDLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGY 161 +P +LV K+D+ D + +E + +++ Sbjct: 297 AVNTVLEEIDAHEIPTLLVMNKIDMLEDFEPRIDRDEENKP-----------NRVWL--- 342 Query: 162 YECSAKTGYGVREVFEAAT 180 SA+TG G+ ++F+A T Sbjct: 343 ---SAQTGAGIPQLFQALT 358 >3IEU-A nrPDB Length = 301 Score = 38.7 bits (89), Expect = 0.002, Method: Composition-based stats. Identities = 34/186 (18%), Positives = 59/186 (31%), Gaps = 35/186 (18%) Query: 13 LVIVGDGACGKTCLLIVFSKGQFP-EVYVPTVFENYVADVEVDGRRVELALWDTAGQ--E 69 + IVG GK+ LL + + + + +G + + DT G E Sbjct: 11 IAIVGRPNVGKSTLLNKLLGQKISITSRKAQTTRHRIVGIHTEGAYQAIYV-DTPGLHME 69 Query: 70 DYDRLRPLSYPDS-----NVVLICFSIDLPDSLENVQEKWIAEVLHFCQ-----GVPIIL 119 + + L + +V L+ F ++ +W + P+IL Sbjct: 70 EKRAINRLMNKAASSSIGDVELVIFVVE--------GTRWTPDDEMVLNKLREGKAPVIL 121 Query: 120 VGCKVDLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAA 179 KVD + + Q +A Q+ SA+TG V + A Sbjct: 122 AVNKVDNVQEKADLLPHL------------QFLASQMNFLDIVPISAETGLNVDTI-AAI 168 Query: 180 TRASLM 185 R L Sbjct: 169 VRKHLP 174 >6F1T-i nrPDB Length = 492 Score = 38.7 bits (89), Expect = 0.002, Method: Composition-based stats. Identities = 19/90 (21%), Positives = 32/90 (35%), Gaps = 2/90 (2%) Query: 91 IDLPDSLENVQEKWIAEVLHFCQGVPIILVGCKVDLRNDPQTIEQLRQEGQQPVTSQEGQ 150 + ENV VL G+P+++V K D + + R E + S + Sbjct: 201 LTSGSDEENVALPLGDNVLTHNLGIPVLVVCTKCDAVSVLEKEHDYRDEHLDFIQSHL-R 259 Query: 151 SVADQIGATGYYECSAKTGYGVREVFEAAT 180 Q GA Y S K + +++ Sbjct: 260 RFCLQYGAALIY-TSVKEEKNLDLLYKYIV 288 >6F1Y-j nrPDB Length = 337 Score = 38.3 bits (88), Expect = 0.003, Method: Composition-based stats. Identities = 19/90 (21%), Positives = 32/90 (35%), Gaps = 2/90 (2%) Query: 91 IDLPDSLENVQEKWIAEVLHFCQGVPIILVGCKVDLRNDPQTIEQLRQEGQQPVTSQEGQ 150 + ENV VL G+P+++V K D + + R E + S + Sbjct: 165 LTSGSDEENVALPLGDNVLTHNLGIPVLVVCTKCDAVSVLEKEHDYRDEHLDFIQSHL-R 223 Query: 151 SVADQIGATGYYECSAKTGYGVREVFEAAT 180 Q GA Y S K + +++ Sbjct: 224 RFCLQYGAALIY-TSVKEEKNLDLLYKYIV 252 >3LLU-A nrPDB Length = 196 Score = 38.3 bits (88), Expect = 0.003, Method: Composition-based stats. Identities = 29/183 (15%), Positives = 59/183 (32%), Gaps = 18/183 (9%) Query: 12 KLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDG----RRVELALWDTAG 67 +++++G GK+ + V P T+F + D V +WD G Sbjct: 22 RILLMGLRRSGKSSIQKVVFHKMSPNE---TLFLESTNKIYKDDISNSSFVNFQIWDFPG 78 Query: 68 QEDYDRLR---PLSYPDSNVVLICFSIDLPDSLENVQEKW---IAEVLHFCQGVPIILVG 121 Q D+ + + + + + ID D + +++ + + Sbjct: 79 QMDFFDPTFDYEMIFRGTGA--LIYVIDAQDDYMEALTRLHITVSKAYKVNPDMNFEVFI 136 Query: 122 CKVDLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATR 181 KVD +D IE R Q+ + +Y S + + E F + Sbjct: 137 HKVDGLSDDHKIETQRDIHQRANDDLADAGLEKLH--LSFYLTS-IYDHSIFEAFSKVVQ 193 Query: 182 ASL 184 + Sbjct: 194 KLI 196 >3C5H-A nrPDB Length = 255 Score = 37.9 bits (87), Expect = 0.003, Method: Composition-based stats. Identities = 14/105 (13%), Positives = 37/105 (35%), Gaps = 19/105 (18%) Query: 83 NVVLICFSIDLP--DSLENVQEKWIAEVLHFCQGV--PIILVGCKVDLRNDPQTIEQLRQ 138 + L+ + + ++ Q K+++ + + PI++V K D + Sbjct: 164 DGFLLGIDVSRGMNRNFDD-QLKFVSNLYNQLAKTKKPIVVVLTKCD------------E 210 Query: 139 EGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRAS 183 ++ + ++ + A E SA++ V F + Sbjct: 211 GVERYI--RDAHTFALSKKNLQVVETSARSNVNVDLAFSTLVQLI 253 >3IZY-P nrPDB Length = 537 Score = 37.9 bits (87), Expect = 0.003, Method: Composition-based stats. Identities = 26/132 (19%), Positives = 42/132 (31%), Gaps = 15/132 (11%) Query: 55 GRRVELALWDTAGQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQ- 113 G ++ DT G + +R + V I + D + V ++ + + H Sbjct: 51 GEKITF--LDTPGHAAFSAMRA---RGTQVTDIVILVVAAD--DGVMKQTVESIQHAKDA 103 Query: 114 GVPIILVGCKVDLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVR 173 VPI+L K D + V G G SA TG + Sbjct: 104 HVPIVLAINKCDKAEADPEKVKKELLAYDVVCEDYG-------GDVQAVHVSALTGENMM 156 Query: 174 EVFEAATRASLM 185 + EA + M Sbjct: 157 ALAEATIALAEM 168 >3R9W-A nrPDB Length = 307 Score = 37.6 bits (86), Expect = 0.004, Method: Composition-based stats. Identities = 34/185 (18%), Positives = 54/185 (29%), Gaps = 35/185 (18%) Query: 13 LVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELAL--WDTAG--Q 68 + IVG GK+ LL G + P + + V E + DT G + Sbjct: 12 VAIVGKPNVGKSTLLNNLL-GTKVSIISPKAGTTRMRVLGVKNIPNEAQIIFLDTPGIYE 70 Query: 69 EDYDRLRPLSYPD------SNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGV------P 116 + S + +I F ID E W Q P Sbjct: 71 PKKSDVLGHSMVEIAKQSLEEADVILFMID-------ATEGWRPRDEEIYQNFIKPLNKP 123 Query: 117 IILVGCKVDLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVF 176 +I+V K+D + + L E + T SA G + E+ Sbjct: 124 VIVVINKIDKIGPAKNVLPLIDEIHK-----------KHPELTEIVPISALKGANLDELV 172 Query: 177 EAATR 181 + + Sbjct: 173 KTILK 177 >2QAG-C nrPDB Length = 418 Score = 37.6 bits (86), Expect = 0.004, Method: Composition-based stats. Identities = 15/67 (22%), Positives = 26/67 (38%), Gaps = 9/67 (13%) Query: 10 RRKLVIVGDGACGKTCLLIV-FSKGQFPEVY-------VPTVFENYVADVEVDGR-RVEL 60 L++VG+ GK+ L+ F + Y TV + +G ++ L Sbjct: 31 EFTLMVVGESGLGKSTLINSLFLTDLYSPEYPGPSHRIKKTVQVEQSKVLIKEGGVQLLL 90 Query: 61 ALWDTAG 67 + DT G Sbjct: 91 TIVDTPG 97 >5CYO-A nrPDB Length = 274 Score = 37.6 bits (86), Expect = 0.004, Method: Composition-based stats. Identities = 16/68 (23%), Positives = 28/68 (41%), Gaps = 10/68 (14%) Query: 10 RRKLVIVGDGACGKTCLLIVFSKGQFP-EVYVPTVFENYVADVEV---------DGRRVE 59 +++VG GK+ L+ K + + PT E +E+ G R++ Sbjct: 4 EFNIMVVGQSGLGKSTLINTLFKSKISRKSVQPTSEERIPKTIEIKSITHDIEEKGVRMK 63 Query: 60 LALWDTAG 67 L + DT G Sbjct: 64 LTVIDTPG 71 >2E87-A nrPDB Length = 357 Score = 37.2 bits (85), Expect = 0.005, Method: Composition-based stats. Identities = 33/211 (15%), Positives = 63/211 (29%), Gaps = 44/211 (20%) Query: 13 LVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEV---DGRRVELALWDTAGQE 69 +VI G GK+ LL + + P + V + + DT G Sbjct: 170 VVIAGHPNVGKSTLLKALTTAKPEIASYP----FTTRGINVGQFEDGYFRYQIIDTPGLL 225 Query: 70 DYDRLRPLSYPD-------------SNVVLICFSIDLPDSL---ENVQEKWIAEVLHFCQ 113 D RP+S + N+++ F E + EV + Sbjct: 226 D----RPISERNEIEKQAILALRYLGNLIIYIFDPSEHCGFPLEEQIH--LFEEVHGEFK 279 Query: 114 GVPIILVGCKVDLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVR 173 +P ++V K+D+ ++ + + G + SA G G+ Sbjct: 280 DLPFLVVINKIDVADEENIKRL--------------EKFVKEKGLNP-IKISALKGTGID 324 Query: 174 EVFEAATRASLMGKSKTNGKAKKNTTEKKKK 204 V E + K + + + + Sbjct: 325 LVKEEIIKTLRPLAEKVAREKIERELRRYRS 355 >5KUT-A nrPDB Length = 189 Score = 36.8 bits (84), Expect = 0.006, Method: Composition-based stats. Identities = 28/135 (20%), Positives = 42/135 (31%), Gaps = 18/135 (13%) Query: 15 IVGDGACGKTCLLIVF----SKGQFPEVYVPTVFENYVADVEVDGRRVELALWD--TAGQ 68 +VG GK+ L F Q P + V+V+G+ L L + T G Sbjct: 14 VVGACGVGKSAFLQAFLGRGLGHQDTREQPPGYAID---TVQVNGQEKYLILCEVGTDGL 70 Query: 69 EDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQG-VPIILVGCKVDLR 127 L +V + F P S + + H+ G P + V K DL Sbjct: 71 -----LATSLDATCDVACLMFDGSDPKSFAHCASVYKH---HYMDGQTPCLFVSSKADLP 122 Query: 128 NDPQTIEQLRQEGQQ 142 E + Sbjct: 123 EGVAVSGPSPAEFCR 137 >4DCU-A nrPDB Length = 456 Score = 36.8 bits (84), Expect = 0.007, Method: Composition-based stats. Identities = 34/205 (16%), Positives = 64/205 (31%), Gaps = 25/205 (12%) Query: 7 NSIRRKLVIVGDGACGKTCLLIVFSKGQ--FPEVYVPTVFENYVADVEVDGRRVELALWD 64 N + ++G GK+ L+ + T + + + + D Sbjct: 192 NEEVIQFCLIGRPNVGKSSLVNAMLGEERVIVSNVAGTTRDAVDTSFTYNQQE--FVIVD 249 Query: 65 TAG----------QEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQG 114 TAG E Y LR L D + V+ + + Q+K IA H Sbjct: 250 TAGMRKKGKVYETTEKYSVLRALKAIDRSEVVAV--VLDGEEGIIEQDKRIAGYAHEAGK 307 Query: 115 VPIILVGCKVDLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVRE 174 +I+V K D + ++ + +E + Q + + SA T + Sbjct: 308 AVVIVV-NKWDAVDKDESTMKEFEENIR----DHFQFL--DYAPILFM--SALTKKRIHT 358 Query: 175 VFEAATRASLMGKSKTNGKAKKNTT 199 + A +AS + + Sbjct: 359 LMPAIIKASENHSLRVQTNVLNDVI 383 Score = 30.6 bits (68), Expect = 0.46, Method: Composition-based stats. Identities = 21/134 (15%), Positives = 47/134 (35%), Gaps = 21/134 (15%) Query: 3 QQVGNSIRRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFEN---YVADVEVDGR--R 57 +G + + IVG GK+ + + + + V + + Sbjct: 19 SHMGKPV---VAIVGRPNVGKSTIFNRIAGER-----ISIVEDTPGVTRDRIYSSAEWLN 70 Query: 58 VELALWDTAGQEDYDRLRPLSYPDS------NVVLICFSIDLPDSLENVQEKWIAEVLHF 111 + L DT G + D +I F ++ + + E+ +A++L+ Sbjct: 71 YDFNLIDTGGIDIGDEPFLAQIRQQAEIAMDEADVIIFMVNGREGVTAADEE-VAKILYR 129 Query: 112 CQGVPIILVGCKVD 125 + P++L K+D Sbjct: 130 TKK-PVVLAVNKLD 142 >2Q3F-A nrPDB Length = 181 Score = 36.4 bits (83), Expect = 0.008, Method: Composition-based stats. Identities = 30/189 (15%), Positives = 59/189 (31%), Gaps = 18/189 (9%) Query: 7 NSIRRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDG----RRVELAL 62 ++ +++++G GK+ + V P T+F + + V + Sbjct: 1 GEVKPRILLMGLRRSGKSSIQKVVFHKMSPNE---TLFLESTNKICREDVSNSSFVNFQI 57 Query: 63 WDTAGQEDYDRLR---PLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLH---FCQGVP 116 WD GQ D+ + + + + F ID D + V + Sbjct: 58 WDFPGQIDFFDPTFDYEMIFRGTGA--LIFVIDSQDDYMEALARLHLTVTRAYKVNTDIN 115 Query: 117 IILVGCKVDLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVF 176 + KVD +D IE R Q+ + +Y S + + E F Sbjct: 116 FEVFIHKVDGLSDDHKIETQRDIHQRANDDLADAGLEKIH--LSFYLTS-IYDHSIFEAF 172 Query: 177 EAATRASLM 185 + + Sbjct: 173 SKVVQKLIP 181 >6CES-C nrPDB Length = 399 Score = 36.4 bits (83), Expect = 0.009, Method: Composition-based stats. Identities = 30/188 (15%), Positives = 60/188 (31%), Gaps = 18/188 (9%) Query: 8 SIRRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDG----RRVELALW 63 S + +++++G GK + V P T+F + D V +W Sbjct: 59 SSKPRILLMGLRRSGKNSIQKVVFHKMSPNE---TLFLESTNKIYKDDISNSSFVNFQIW 115 Query: 64 DTAGQEDYDRLR---PLSYPDSNVVLICFSIDLPDSLENVQEKW---IAEVLHFCQGVPI 117 D GQ D+ + + + + + ID D + +++ + Sbjct: 116 DFPGQMDFFDPTFDYEMIFRGTGA--LIYVIDAQDDYMEALTRLHITVSKAYKVNPDMNF 173 Query: 118 ILVGCKVDLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFE 177 + KVD +D IE R Q+ + +Y S + + E F Sbjct: 174 EVFIHKVDGLSDDHKIETQRDIHQRANDDLADAGLEKLH--LSFYLTS-IYDHSIFEAFS 230 Query: 178 AATRASLM 185 + + Sbjct: 231 KVVQKLIP 238 >4V7F-o nrPDB Length = 647 Score = 36.4 bits (83), Expect = 0.010, Method: Composition-based stats. Identities = 35/203 (17%), Positives = 61/203 (30%), Gaps = 25/203 (12%) Query: 13 LVIVGDGACGKTCLLIVFSK-GQFPEVYVPTVFENYVADVEVDGRRVELALWDTAG---- 67 L+I G GK+ L +K + Y T YV D + + DT G Sbjct: 170 LLICGYPNVGKSSFLRCITKSDVDVQPYAFTTKSLYVGHF--DYKYLRFQAIDTPGILDR 227 Query: 68 -QEDYDRLRPLSYPD----SNVVLICFSIDLPDSLE-NVQEKWIAEVLHFCQGVPIILVG 121 E+ + + S + VL + Q K + +++V Sbjct: 228 PTEEMNNIEMQSIYAIAHLRSCVLYFMDLSEQCGFTIEAQVKLFHSIKPLFANKSVMVVI 287 Query: 122 CKVDLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATR 181 K D+ E+ Q + ++ S + V EV A Sbjct: 288 NKTDIIRPEDLDEERAQLLESV----------KEVPGVEIMTSSCQLEENVMEVRNKACE 337 Query: 182 ASLMGK--SKTNGKAKKNTTEKK 202 L + +K +++ N K Sbjct: 338 KLLASRIENKLKSQSRINNVLNK 360 >3H2Y-A nrPDB Length = 368 Score = 36.4 bits (83), Expect = 0.010, Method: Composition-based stats. Identities = 17/79 (21%), Positives = 31/79 (39%), Gaps = 11/79 (13%) Query: 103 KWIAEVLHFCQGVPIILVGCKVDLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATG-- 160 W+ + F ++LVG K DL ++++ + A Q+G Sbjct: 85 SWLPGLHRFVGNNKVLLVGNKADLIPKSVKHDKVKHWMRYS---------AKQLGLKPED 135 Query: 161 YYECSAKTGYGVREVFEAA 179 + SA G G+ E+ +A Sbjct: 136 VFLISAAKGQGIAELADAI 154 Score = 29.9 bits (66), Expect = 0.81, Method: Composition-based stats. Identities = 11/59 (18%), Positives = 23/59 (38%), Gaps = 5/59 (8%) Query: 13 LVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELA----LWDTAG 67 + +VG GK+ + +F + + ++ +D + L L+DT G Sbjct: 163 VYVVGCTNVGKSTFINR-MIKEFSDETENVITTSHFPGTTLDLIDIPLDEESSLYDTPG 220 >4YMS-J nrPDB Length = 240 Score = 36.0 bits (82), Expect = 0.010, Method: Composition-based stats. Identities = 12/49 (24%), Positives = 23/49 (46%), Gaps = 5/49 (10%) Query: 13 LVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELA 61 +VI+G GK+ LL + PT E ++ V+++ +V + Sbjct: 30 VVIIGPSGSGKSTLLRCI-----NLLEEPTKGEVFIDGVKINNGKVNIN 73 >2CXX-A nrPDB Length = 190 Score = 36.0 bits (82), Expect = 0.011, Method: Composition-based stats. Identities = 27/203 (13%), Positives = 59/203 (29%), Gaps = 42/203 (20%) Query: 13 LVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDTAG----- 67 ++ G GK+ L+ + + P V +E++ + + + D G Sbjct: 4 IIFAGRSNVGKSTLIYRLTGKKVRRGKRPGV---TRKIIEIEWKNHK--IIDMPGFGFMM 58 Query: 68 ------QEDYDRLRPLSY----PDSNVVLICFSIDLPDSLENVQEKWIA--EVLHFCQ-- 113 QE + +V ++ + + ++W E+ + Sbjct: 59 GLPKEVQERIKDEIVHFIEDNAKNIDVAVLV---VDGKAAPEIIKRWEKRGEIPIDVEFY 115 Query: 114 ------GVPIILVGCKVDLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAK 167 +P I+ K+D + Q + E V E V + SAK Sbjct: 116 QFLRELDIPTIVAVNKLDKIKNVQEVINFLAEKF-EVPLSEIDKV--------FIPISAK 166 Query: 168 TGYGVREVFEAATRASLMGKSKT 190 G + + + + Sbjct: 167 FGDNIERLKNRIFEVIRERQGRR 189 >1HEY-A nrPDB Length = 128 Score = 35.6 bits (81), Expect = 0.015, Method: Composition-based stats. Identities = 17/96 (17%), Positives = 34/96 (35%), Gaps = 10/96 (10%) Query: 10 RRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALW-----D 64 K ++VG+G GK+ + + + F V + + ++ G ++ W D Sbjct: 4 ELKFLVVGNGGTGKSTVRNLLKELGFNNVEDAEDGVDALNKLQAGGYGFVISDWNMPNMD 63 Query: 65 TAGQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENV 100 G E +R + L + EN+ Sbjct: 64 --GLELLKTIRA---DGAMSALPVLMVTAEAKKENI 94 >3PR1-A nrPDB Length = 195 Score = 35.3 bits (80), Expect = 0.020, Method: Composition-based stats. Identities = 30/195 (15%), Positives = 63/195 (32%), Gaps = 46/195 (23%) Query: 7 NSIRRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELAL---- 62 ++ ++ VG GK+ LL + +V+ R + L Sbjct: 20 PPLKGEVAFVGRSNVGKSSLLNALFNRK----------IAFVSKTPGKTRSINFYLVNSK 69 Query: 63 ---WDTAG--------QED--YDRLRPLSYPDS----NVVLICFSIDLPDSLENVQEKWI 105 D G +E + RL + + V L+ P + + +W+ Sbjct: 70 YYFVDLPGYGYAKVSKKERMLWKRLVEDYFKNRWSLQMVFLLVDGRIPPQDSDLMMVEWM 129 Query: 106 AEVLHFCQGVPIILVGCKVDLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECS 165 + +P +V K+D + ++ +E + V + G S Sbjct: 130 KSL-----NIPFTIVLTKMD----------KVKMSERAKKLEEHRKVFSKYGEYTIIPTS 174 Query: 166 AKTGYGVREVFEAAT 180 + TG G+ E+ + + Sbjct: 175 SVTGEGISELLDLIS 189 >5NON-A nrPDB Length = 165 Score = 34.9 bits (79), Expect = 0.024, Method: Composition-based stats. Identities = 16/45 (35%), Positives = 20/45 (44%), Gaps = 8/45 (17%) Query: 12 KLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGR 56 KL I+GDG G T L + F G+FP Y + VD Sbjct: 51 KLEIIGDGGVG-TILDMTFVPGEFPHEYK-------EKFILVDNE 87 >2VNE-A nrPDB Length = 201 Score = 34.9 bits (79), Expect = 0.024, Method: Composition-based stats. Identities = 16/45 (35%), Positives = 20/45 (44%), Gaps = 8/45 (17%) Query: 12 KLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGR 56 KL I+GDG G T L + F G+FP Y + VD Sbjct: 67 KLEIIGDGGVG-TILDMTFVPGEFPHEYK-------EKFILVDNE 103 >5IRR-A nrPDB Length = 308 Score = 34.5 bits (78), Expect = 0.030, Method: Composition-based stats. Identities = 9/26 (34%), Positives = 12/26 (46%) Query: 7 NSIRRKLVIVGDGACGKTCLLIVFSK 32 KL++VGD GKT L+ Sbjct: 23 KKKYIKLIVVGDSGLGKTTLIKSLIS 48 >5KH0-A nrPDB Length = 396 Score = 34.5 bits (78), Expect = 0.030, Method: Composition-based stats. Identities = 26/149 (17%), Positives = 48/149 (32%), Gaps = 22/149 (14%) Query: 1 MSQQVGNSIRRKLVIVGDGACGKTCLLIVFSKGQ--FPEVYVPTVFENYVADVEVDG-RR 57 M G R+ + I G GK+ + + T + +E+ Sbjct: 1 MIASGG--FRKYIAITGRRNVGKSSFMNALIGQEVSIVSNVAGTTTDPVFKSMELSPVGP 58 Query: 58 VELALWDTAGQEDYDRL--------RPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVL 109 + L DT G +D L + Y +LI I P + E K E+ Sbjct: 59 ITLI--DTPGLDDVGELGIKRIKKAKKSLYRADCGILIVDDI--PGNFEEQIIKLFKELE 114 Query: 110 HFCQGVPIILVGCKVDLRNDPQTIEQLRQ 138 +P + K+D + ++ ++ Sbjct: 115 -----IPYFIAINKIDTIDHENIEKEYKK 138 >5YT0-A nrPDB Length = 364 Score = 34.5 bits (78), Expect = 0.031, Method: Composition-based stats. Identities = 24/133 (18%), Positives = 46/133 (34%), Gaps = 27/133 (20%) Query: 13 LVIVGDGACGKTCLLIVF----SKGQFPEVYVPTVFENYVADVEVDGR--------RVEL 60 +V++G GKT LL + + + V ++ V+L Sbjct: 19 VVVLGHVDHGKTTLLDKIRRTAVAAKEAGGITQHIGASIVPADVIEKIAEPLKKVIPVKL 78 Query: 61 AL-----WDTAGQEDYDRLRPLSYPDSNVVLICFSID---LPDSLENVQEKWIAEVLHFC 112 + DT G E + LR ++ ++ I P + E ++ + E Sbjct: 79 VIPGLLFIDTPGHELFSNLRRRGGSVADFAILVVDIMEGFKPQTYEALE--LLKERR--- 133 Query: 113 QGVPIILVGCKVD 125 VP ++ K+D Sbjct: 134 --VPFLIAANKID 144 >4TN1-B nrPDB Length = 345 Score = 34.5 bits (78), Expect = 0.033, Method: Composition-based stats. Identities = 41/223 (18%), Positives = 70/223 (31%), Gaps = 52/223 (23%) Query: 13 LVIVGDGACGKTCLL--IVFSKGQFPEVYVPT--VFENY---------VADVEVDGR-RV 58 I+G GKT LL I + Q E T + Y A V DG+ Sbjct: 13 CCILGHVRTGKTKLLDKIRQTNVQEGEAGGITQQIGATYFPVEAIKQKTAVVNKDGKFEF 72 Query: 59 E---LALWDTAGQEDYDRLRPLSYPDS---NVVLICFSIDLPDSLENVQEKWIAEVLHFC 112 + L + DT G E + LR S N+ ++ I + ++ + Sbjct: 73 KVPGLLIIDTPGHESFSNLRS---RGSSLCNIAILVVDIMHGLEPQTIESLRLLRERK-- 127 Query: 113 QGVPIILVGCKVD------------LRNDPQTIEQLRQEGQQPVTSQEGQSVADQ-IGAT 159 P ++ K+D R + Q + Q A+Q + Sbjct: 128 --TPFVVALNKIDRLYGWKKIENNGFRESFALQNKAVQNEFRNRLDQVKLQFAEQGFNSE 185 Query: 160 GYYE------------CSAKTGYGVREVFEAATRASLMGKSKT 190 +YE SA TG G+ ++ + + + + Sbjct: 186 LFYENKNFARYVSLVPTSAHTGEGIPDMLKLIVQLCQERMASS 228 >3JB9-B nrPDB Length = 984 Score = 34.1 bits (77), Expect = 0.039, Method: Composition-based stats. Identities = 20/109 (18%), Positives = 35/109 (32%), Gaps = 7/109 (6%) Query: 55 GRRVELALWDTAGQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHF-CQ 113 G+ DT G D+ S+ V++ + E V + H Sbjct: 207 GKTFAFQCIDTPGHVDFVDEVAAPMAISDGVVLVVDVI-----EGVMINTTRIIKHAILH 261 Query: 114 GVPIILVGCKVD-LRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGY 161 +PI+LV KVD L + + + V + ++ Y Sbjct: 262 DMPIVLVLNKVDRLILELRLPPNDAYHKLRHVIDEVNDNICQISKDLKY 310 >1SHZ-A nrPDB Length = 340 Score = 34.1 bits (77), Expect = 0.039, Method: Composition-based stats. Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 10/64 (15%) Query: 8 SIRRKLVIVGDGACGKTCLL--IVFSKGQF-----PEVYVPTVFENYVA--DVEVDGRRV 58 + KL+++G G GK+ L + GQ E + PT++ N + V VD R Sbjct: 10 AREVKLLLLGAGESGKSTFLKQMRIIHGQDFDQRAREEFRPTIYSNVIKGMRVLVDARE- 68 Query: 59 ELAL 62 +L + Sbjct: 69 KLHI 72 Score = 27.9 bits (61), Expect = 3.3, Method: Composition-based stats. Identities = 29/186 (15%), Positives = 54/186 (29%), Gaps = 38/186 (20%) Query: 36 PEVYVPTVFENYVADVEVDG--------RRVELALWDTAGQEDYDRLRPLSYPDSNVVLI 87 Y+P+ + +A G + + ++D GQ + + ++ Sbjct: 150 VPDYIPSQQDILLARRPTKGIHETHFTFKDLHFKMFDVGGQRSERKKWFECFEGVTAIIF 209 Query: 88 CFSIDLPDSLENVQEKWIAEVLHFC-------------QGVPIILVGCKVDLRNDPQTIE 134 C ++ D + + E +H IIL K DL + Sbjct: 210 CVALSDYD--QVLMEDRQTNRMHESMKLFDSICNNKWFTDTSIILFLNKKDLFEEKIKKS 267 Query: 135 QLR---QEGQQPVTSQEGQSV-----------ADQIGATGYYECSAKTGYGVREVFEAAT 180 L E T +E + D ++ C A V+ VF+A T Sbjct: 268 PLTICYPEYAGSNTYEEAAAYIQCQFEDLNKRKDTKEIYTHFTC-ATDTKNVQFVFDAVT 326 Query: 181 RASLMG 186 + Sbjct: 327 DVIIKN 332 >6G79-A nrPDB Length = 225 Score = 34.1 bits (77), Expect = 0.043, Method: Composition-based stats. Identities = 28/194 (14%), Positives = 57/194 (29%), Gaps = 27/194 (13%) Query: 12 KLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDTAGQEDY 71 KL+++G GK+ ++ + + + + + L+D GQ Sbjct: 32 KLLLLGADNSGKSTIVKQ--MKIIHGGSGGSGGTTGIVETHFTFKNLHFRLFDVGGQRSE 89 Query: 72 DRLRPLSYPDSNVVLICFSIDL----PDS---LENVQEKWIAEVLHFCQGVPIILVGCKV 124 + + D ++ C + +S +++ F IIL K Sbjct: 90 RKKWIHCFEDVTAIIFCVDLSDYNRMHESLMLFDSICNN------KFFIDTSIILFLNKK 143 Query: 125 DLRNDPQTIEQLR---QEGQQPVTSQEGQSV--------ADQIGATGYYE-CSAKTGYGV 172 DL + L E P T ++ + Y A Sbjct: 144 DLFGEKIKKSPLTICFPEYTGPNTYEDAAAYIQAQFESKNRSPNKEIYCHMTCATDTNNA 203 Query: 173 REVFEAATRASLMG 186 + +F+A T + Sbjct: 204 QVIFDAVTDIIIAN 217 >1ZCB-A nrPDB Length = 362 Score = 34.1 bits (77), Expect = 0.044, Method: Composition-based stats. Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 10/65 (15%) Query: 7 NSIRRKLVIVGDGACGKTCLL--IVFSKGQF-----PEVYVPTVFENYVA--DVEVDGRR 57 ++ K++++G G GK+ L + GQ E + PT++ N + V VD R Sbjct: 30 SARLVKILLLGAGESGKSTFLKQMRIIHGQDFDQRAREEFRPTIYSNVIKGMRVLVDARE 89 Query: 58 VELAL 62 +L + Sbjct: 90 -KLHI 93 >5FG3-A nrPDB Length = 623 Score = 34.1 bits (77), Expect = 0.048, Method: Composition-based stats. Identities = 24/133 (18%), Positives = 46/133 (34%), Gaps = 27/133 (20%) Query: 13 LVIVGDGACGKTCLLIVF----SKGQFPEVYVPTVFENYVADVEVDGR--------RVEL 60 +V++G GKT LL + + + V ++ V+L Sbjct: 19 VVVLGHVDHGKTTLLDKIRRTAVAAKEAGGITQHIGASIVPADVIEKIAEPLKKVIPVKL 78 Query: 61 AL-----WDTAGQEDYDRLRPLSYPDSNVVLICFSID---LPDSLENVQEKWIAEVLHFC 112 + DT G E + LR ++ ++ I P + E ++ + E Sbjct: 79 VIPGLLFIDTPGHELFSNLRRRGGSVADFAILVVDIMEGFKPQTYEALE--LLKERR--- 133 Query: 113 QGVPIILVGCKVD 125 VP ++ K+D Sbjct: 134 --VPFLIAANKID 144 >4NCL-A nrPDB Length = 457 Score = 34.1 bits (77), Expect = 0.049, Method: Composition-based stats. Identities = 41/223 (18%), Positives = 70/223 (31%), Gaps = 52/223 (23%) Query: 13 LVIVGDGACGKTCLL--IVFSKGQFPEVYVPT--VFENY---------VADVEVDGR-RV 58 I+G GKT LL I + Q E T + Y A V DG+ Sbjct: 13 CCILGHVDTGKTKLLDKIRQTNVQEGEAGGITQQIGATYFPVEAIKQKTAVVNKDGKFEF 72 Query: 59 E---LALWDTAGQEDYDRLRPLSYPDS---NVVLICFSIDLPDSLENVQEKWIAEVLHFC 112 + L + DT G E + LR S N+ ++ I + ++ + Sbjct: 73 KVPGLLIIDTPGHESFSNLRS---RGSSLCNIAILVVDIMHGLEPQTIESLRLLRERK-- 127 Query: 113 QGVPIILVGCKVD------------LRNDPQTIEQLRQEGQQPVTSQEGQSVADQ-IGAT 159 P ++ K+D R + Q + Q A+Q + Sbjct: 128 --TPFVVALNKIDRLYGWKKIENNGFRESFALQNKAVQNEFRNRLDQVKLQFAEQGFNSE 185 Query: 160 GYYE------------CSAKTGYGVREVFEAATRASLMGKSKT 190 +YE SA TG G+ ++ + + + + Sbjct: 186 LFYENKNFARYVSLVPTSAHTGEGIPDMLKLIVQLCQERMASS 228 >4N3G-A nrPDB Length = 603 Score = 33.7 bits (76), Expect = 0.051, Method: Composition-based stats. Identities = 41/223 (18%), Positives = 70/223 (31%), Gaps = 52/223 (23%) Query: 13 LVIVGDGACGKTCLL--IVFSKGQFPEVYVPT--VFENY---------VADVEVDGR-RV 58 I+G GKT LL I + Q E T + Y A V DG+ Sbjct: 13 CCILGHVDTGKTKLLDKIRQTNVQEGEAGGITQQIGATYFPVEAIKQKTAVVNKDGKFEF 72 Query: 59 E---LALWDTAGQEDYDRLRPLSYPDS---NVVLICFSIDLPDSLENVQEKWIAEVLHFC 112 + L + DT G E + LR S N+ ++ I + ++ + Sbjct: 73 KVPGLLIIDTPGHESFSNLRS---RGSSLCNIAILVVDIMHGLEPQTIESLRLLRERK-- 127 Query: 113 QGVPIILVGCKVD------------LRNDPQTIEQLRQEGQQPVTSQEGQSVADQ-IGAT 159 P ++ K+D R + Q + Q A+Q + Sbjct: 128 --TPFVVALNKIDRLYGWKKIENNGFRESFALQNKAVQNEFRNRLDQVKLQFAEQGFNSE 185 Query: 160 GYYE------------CSAKTGYGVREVFEAATRASLMGKSKT 190 +YE SA TG G+ ++ + + + + Sbjct: 186 LFYENKNFARYVSLVPTSAHTGEGIPDMLKLIVQLCQERMASS 228 >1PUJ-A nrPDB Length = 282 Score = 33.7 bits (76), Expect = 0.059, Method: Composition-based stats. Identities = 14/68 (20%), Positives = 23/68 (33%), Gaps = 5/68 (7%) Query: 1 MSQQVGNSIRRKLVIVGDGACGKTCLLIVFSKGQFPEVYV-PTVFENYVADVEVDGRRVE 59 M + + +I+G GK+ L+ +K + P G+ Sbjct: 111 MRAKGVKPRAIRALIIGIPNVGKSTLINRLAKKNIAKTGDRP--GITTSQQWVKVGKE-- 166 Query: 60 LALWDTAG 67 L L DT G Sbjct: 167 LELLDTPG 174 >5M04-A nrPDB Length = 360 Score = 32.9 bits (74), Expect = 0.097, Method: Composition-based stats. Identities = 18/75 (24%), Positives = 36/75 (48%), Gaps = 17/75 (22%) Query: 105 IAEVLHFCQGV---PIILVGCKVDLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIG-ATG 160 I+E+ + Q + P LV K+DL + + ++ +++A+ +G Sbjct: 283 ISELEKYSQDLATKPRWLVFNKIDLLDKVEAE-------------EKAKAIAEALGWEDK 329 Query: 161 YYECSAKTGYGVREV 175 YY SA +G GV+++ Sbjct: 330 YYLISAASGLGVKDL 344 >2GTP-A nrPDB Length = 323 Score = 32.9 bits (74), Expect = 0.11, Method: Composition-based stats. Identities = 31/183 (16%), Positives = 55/183 (30%), Gaps = 34/183 (18%) Query: 37 EVYVPTVFENYVADVEVDG--------RRVELALWDTAGQEDYDRLRPLSYPDSNVVLIC 88 Y+PT + V+ G + + ++D GQ + + ++ C Sbjct: 134 PNYIPTQQDVLRTRVKTTGIVETHFTFKDLHFKMFDVGGQRSERKKWIHCFEGVTAIIFC 193 Query: 89 -----FSIDLPDSLE-NVQEKWIAEVLHFCQG-----VPIILVGCKVDLRNDPQTIEQLR 137 + + L + E N + + C IIL K DL + L Sbjct: 194 VALSDYDLVLAEDEEMNRMHESMKLFDSICNNKWFTDTSIILFLNKKDLFEEKIKKSPLT 253 Query: 138 ---QEGQQPVTSQEGQSV-----------ADQIGATGYYECSAKTGYGVREVFEAATRAS 183 E T +E + D ++ C A V+ VF+A T Sbjct: 254 ICYPEYAGSNTYEEAAAYIQCQFEDLNKRKDTKEIYTHFTC-ATDTKNVQFVFDAVTDVI 312 Query: 184 LMG 186 + Sbjct: 313 IKN 315 Score = 26.8 bits (58), Expect = 6.5, Method: Composition-based stats. Identities = 6/20 (30%), Positives = 12/20 (60%) Query: 10 RRKLVIVGDGACGKTCLLIV 29 KL+++G G GK+ ++ Sbjct: 2 EVKLLLLGAGESGKSTIVKQ 21 >1ZO1-I nrPDB Length = 501 Score = 32.6 bits (73), Expect = 0.11, Method: Composition-based stats. Identities = 30/174 (17%), Positives = 60/174 (34%), Gaps = 18/174 (10%) Query: 13 LVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDTAGQEDYD 72 + I+G GKT LL + + ++ V+ + DT G + Sbjct: 7 VTIMGHVDHGKTSLLE-YIRSTKVASGEAGGITQHIGAYHVETENGMITFLDTPGHAAFT 65 Query: 73 RLRPLSYPDSNVVLICFSIDL---PDSLENVQEKWIAEVLHFCQGVPIILVGCKVDLRND 129 +R +++V++ + D P ++E +Q A+V K+D Sbjct: 66 SMRARGAQATDIVVLVVAADDGVMPQTIEAIQHAKAAQVPVVVAV-------NKIDKPEA 118 Query: 130 PQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRAS 183 + + + G G + + SAK G G+ E+ +A + Sbjct: 119 DPDRVKNELSQYGILPEEWG-------GESQFVHVSAKAGTGIDELLDAILLQA 165 >3JCN-b nrPDB Length = 890 Score = 32.6 bits (73), Expect = 0.12, Method: Composition-based stats. Identities = 30/174 (17%), Positives = 60/174 (34%), Gaps = 18/174 (10%) Query: 13 LVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDTAGQEDYD 72 + I+G GKT LL + + ++ V+ + DT G + Sbjct: 394 VTIMGHVDHGKTSLLD-YIRSTKVASGEAGGITQHIGAYHVETENGMITFLDTPGHAAFT 452 Query: 73 RLRPLSYPDSNVVLICFSIDL---PDSLENVQEKWIAEVLHFCQGVPIILVGCKVDLRND 129 +R +++V++ + D P ++E +Q A+V K+D Sbjct: 453 SMRARGAQATDIVVLVVAADDGVMPQTIEAIQHAKAAQVPVVVAV-------NKIDKPEA 505 Query: 130 PQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRAS 183 + + + G G + + SAK G G+ E+ +A + Sbjct: 506 DPDRVKNELSQYGILPEEWG-------GESQFVHVSAKAGTGIDELLDAILLQA 552 >4CSU-9 nrPDB Length = 390 Score = 32.6 bits (73), Expect = 0.13, Method: Composition-based stats. Identities = 18/75 (24%), Positives = 36/75 (48%), Gaps = 17/75 (22%) Query: 105 IAEVLHFCQGV---PIILVGCKVDLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIG-ATG 160 I+E+ + Q + P LV K+DL + + ++ +++A+ +G Sbjct: 263 ISELEKYSQDLATKPRWLVFNKIDLLDKVEAE-------------EKAKAIAEALGWEDK 309 Query: 161 YYECSAKTGYGVREV 175 YY SA +G GV+++ Sbjct: 310 YYLISAASGLGVKDL 324 >5OCH-A nrPDB Length = 612 Score = 32.6 bits (73), Expect = 0.14, Method: Composition-based stats. Identities = 18/72 (25%), Positives = 21/72 (29%), Gaps = 29/72 (40%) Query: 13 LVIVGDGACGKT---CLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDTAGQE 69 + +VG GKT LL F Y PT V +DGR Sbjct: 394 VALVGQSGGGKTTVASLLERF--------YDPTAGV-----VMLDGR------------- 427 Query: 70 DYDRLRPLSYPD 81 D L P Sbjct: 428 DLRTLDPSWLRG 439 >6HZK-A nrPDB Length = 333 Score = 32.2 bits (72), Expect = 0.16, Method: Composition-based stats. Identities = 7/24 (29%), Positives = 13/24 (54%), Gaps = 3/24 (12%) Query: 12 KLVIVG---DGACGKTCLLIVFSK 32 ++V++G D CGK+ L + Sbjct: 6 RVVLIGVAGDSGCGKSTFLNRLAD 29 >2QTH-A nrPDB Length = 364 Score = 31.8 bits (71), Expect = 0.20, Method: Composition-based stats. Identities = 28/174 (16%), Positives = 57/174 (32%), Gaps = 30/174 (17%) Query: 15 IVGDGACGKTCLLIVFSK-GQFPEVYVPTVFENYVADVEVDGRRVELALWDTAGQED--- 70 IVG GKT L + Q + + T + ++ R++ L DT G Sbjct: 184 IVGYTNSGKTSLFNSLTGLTQKVDTKLFTTMSPKRYAIPINNRKIMLV--DTVGFIRGIP 241 Query: 71 -------YDRLRPLSYPDSNVVLICFSIDLPDSL--ENVQEKWIAEVLHFCQGVPIILVG 121 + L Y S+ +++ ++L E +Q + G PI++ Sbjct: 242 PQIVDAFFVTLSEAKY--SDALILVIDSTFSENLLIETLQSSFEILREIGVSGKPILVTL 299 Query: 122 CKVDLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGY--YECSAKTGYGVR 173 K+D N + + ++ ++ + + SA + Sbjct: 300 NKIDKINGDLYKKLDLV-----------EKLSKELYSPIFDVIPISALKRTNLE 342 >3V00-C nrPDB Length = 356 Score = 31.8 bits (71), Expect = 0.21, Method: Composition-based stats. Identities = 32/186 (17%), Positives = 55/186 (29%), Gaps = 46/186 (24%) Query: 39 YVPTVFENYVADVEVDG--------RRVELALWDTAGQEDYDRLRPLSYPDSNVVLIC-- 88 YVPT + + V+ G + + ++D GQ + + ++ C Sbjct: 169 YVPTEQDVLRSRVKTTGIIETQFSFKDLNFRMFDVGGQRSERKKWIHCFEGVTAIIFCVA 228 Query: 89 ---FSIDLPDSLENVQEKWIAEVLHFCQGVP---------IILVGCKVDLRNDPQTIEQL 136 + + L + E + E +H + IIL K DL + L Sbjct: 229 LSDYDLVLAEDEE---MNRMHESMHLFNSICNNKWFTDTSIILFLNKKDLFEEKIKKSPL 285 Query: 137 R---QEGQQPVTSQEGQSVADQIGATGYYE--------------CSAKTGYGVREVFEAA 179 E T +E A + E A V+ VF+A Sbjct: 286 TICYPEYAGSNTYEE----AGNYIKVQFLELNMRRDVKEIYSHMTCATDTQNVKFVFDAV 341 Query: 180 TRASLM 185 T + Sbjct: 342 TDIIIK 347 >5B3F-A nrPDB Length = 343 Score = 31.8 bits (71), Expect = 0.22, Method: Composition-based stats. Identities = 7/32 (21%), Positives = 12/32 (37%), Gaps = 1/32 (3%) Query: 15 IVGDGACGKTCLLIVFSKGQFPEVYVPTVFEN 46 + GD GK+ F E V ++ + Sbjct: 42 VAGDSGSGKSTFT-RAISDIFGEELVSSITVD 72 >3K53-A nrPDB Length = 271 Score = 31.8 bits (71), Expect = 0.22, Method: Composition-based stats. Identities = 36/202 (17%), Positives = 65/202 (32%), Gaps = 33/202 (16%) Query: 13 LVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDTAGQEDYD 72 + +VG+ GKT + + + P V + + R E + D G Sbjct: 6 VALVGNPNVGKTTIFNALTGLRQHVGNWPGVTVEKKEGIM-EYREKEFLVVDLPGIYSLT 64 Query: 73 R------LRPLSYPDSNVVLICFSIDLPDSLENV---QEKWIAEVLHFCQGVPIILVGCK 123 + D N +I +D + N+ E + EV + IILV K Sbjct: 65 AHSIDELIARNFILDGNADVIVDIVDSTCLMRNLFLTLELFEMEVKN------IILVLNK 118 Query: 124 VDLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRAS 183 DL + + + ++G +AK G GV E+ + Sbjct: 119 FDLLKKKGAKIDI-------------KKMRKELGVPV-IPTNAKKGEGVEELKRMI---A 161 Query: 184 LMGKSKTNGKAKKNTTEKKKKK 205 LM + K ++ ++ Sbjct: 162 LMAEGKVTTNPIIPRYDEDIER 183 >1WDT-A nrPDB Length = 665 Score = 31.8 bits (71), Expect = 0.22, Method: Composition-based stats. Identities = 46/267 (17%), Positives = 79/267 (29%), Gaps = 80/267 (29%) Query: 1 MSQQVGNSIRRKLVIVGDGACGKTCLLI-------------VFSKGQFPEVYVP------ 41 M + G IR + +VG GKT L +G Y P Sbjct: 1 MGTEGGAMIRT-VALVGHAGSGKTTLTEALLYKTGAKERRGRVEEGTTTTDYTPEAKLHR 59 Query: 42 TVFENYVADVEVDGRRVELALWDTAGQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQ 101 T VA + G RV L D G D+ + ++ L+ ++ ++ Sbjct: 60 TTVRTGVAPLLFRGHRVFL--LDAPGYGDFVGEIRGALEAADAALV--AVSAEAGVQVGT 115 Query: 102 EK-W-IAEVLHFCQGVPIILVGCK------------------------------------ 123 E+ W +AE L G+P ++V K Sbjct: 116 ERAWTVAERL----GLPRMVVVTKLDKGGDYYALLEDLRSTLGPILPIDLPLYEGGKWVG 171 Query: 124 -VDLRNDPQTIEQLRQEGQQPVTSQEGQSVAD-------------QIGATGYYECSAKTG 169 +D+ + + +E + V +E + V + Y E TG Sbjct: 172 LIDVFHGKAYRYENGEEREAEVPPEERERVQRFRQEVLEAIVETDEGLLEKYLEGEEVTG 231 Query: 170 YGVREVFEAATRASLMGKSKTNGKAKK 196 + + F A R L+ ++ Sbjct: 232 EALEKAFHEAVRRGLLYPVALASGERE 258 >2YYZ-A nrPDB Length = 359 Score = 31.4 bits (70), Expect = 0.27, Method: Composition-based stats. Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 5/43 (11%) Query: 13 LVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDG 55 + ++G CGKT L++ + +Y PT E Y DV V+ Sbjct: 32 VALLGPSGCGKTTTLLMLAG-----IYKPTSGEIYFDDVLVND 69 >1YE8-A nrPDB Length = 178 Score = 31.4 bits (70), Expect = 0.32, Method: Composition-based stats. Identities = 7/22 (31%), Positives = 12/22 (54%) Query: 11 RKLVIVGDGACGKTCLLIVFSK 32 K++I G+ GKT L+ + Sbjct: 1 MKIIITGEPGVGKTTLVKKIVE 22 >4U00-A nrPDB Length = 244 Score = 31.4 bits (70), Expect = 0.32, Method: Composition-based stats. Identities = 13/48 (27%), Positives = 22/48 (45%), Gaps = 10/48 (20%) Query: 12 KLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVE 59 KLVI+G GK+ L+ ++ + + +V VDG V+ Sbjct: 32 KLVIIGPSGSGKSTLIRTINR----------LEDFQEGEVVVDGLSVK 69 >2IYT-A nrPDB Length = 184 Score = 31.0 bits (69), Expect = 0.35, Method: Composition-based stats. Identities = 11/71 (15%), Positives = 25/71 (35%), Gaps = 6/71 (8%) Query: 12 KLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDTAGQEDY 71 K V+VG GK+ + +K + V + ++ T G++++ Sbjct: 4 KAVLVGLPGSGKSTIGRRLAKALGVGLLDTDVAIEQRTGRSI------ADIFATDGEQEF 57 Query: 72 DRLRPLSYPDS 82 R+ + Sbjct: 58 RRIEEDVVRAA 68 >5C78-A nrPDB Length = 564 Score = 31.0 bits (69), Expect = 0.38, Method: Composition-based stats. Identities = 6/16 (37%), Positives = 11/16 (68%) Query: 12 KLVIVGDGACGKTCLL 27 K+ +G+ CGK+ L+ Sbjct: 377 KIAFIGESGCGKSTLV 392 >4Z54-A nrPDB Length = 287 Score = 31.0 bits (69), Expect = 0.38, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 29/67 (43%), Gaps = 10/67 (14%) Query: 11 RKLVIVGDGACGKTCLLIVFSKGQFP--------EVYVP-TVFENYV-ADVEVDGRRVEL 60 +++VG GK+ L+ K Q E +P TV + +E G +++L Sbjct: 20 FNIMVVGQSGLGKSTLVNTLFKSQVSRKASSWNREEKIPKTVEIKAIGHVIEEGGVKMKL 79 Query: 61 ALWDTAG 67 + DT G Sbjct: 80 TVIDTPG 86 >1LNZ-A nrPDB Length = 342 Score = 31.0 bits (69), Expect = 0.38, Method: Composition-based stats. Identities = 35/198 (17%), Positives = 64/198 (32%), Gaps = 35/198 (17%) Query: 9 IRRKLV----IVGDGACGKTCLLIVF--SKGQFPEVYVPTVFENYVADVEVDGRRVELAL 62 + K++ +VG + GK+ LL V +K + + + T+ N DGR +A Sbjct: 153 LELKVLADVGLVGFPSVGKSTLLSVVSSAKPKIADYHFTTLVPNLGMVETDDGRSFVMA- 211 Query: 63 WD----TAGQEDYDRLRPLSYPDSNVV-LICFSIDL-----PDSLENVQEKW--IAEVLH 110 D G L +I ID+ D ++ ++E Sbjct: 212 -DLPGLIEGAHQGVGLGHQFLRHIERTRVIVHVIDMSGLEGRDPYDDYLTINQELSEYNL 270 Query: 111 FCQGVPIILVGCKVDLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGY 170 P I+V K+D+ + +E +++ + SA T Sbjct: 271 RLTERPQIIVANKMDMPEAAENLEAFKEKLTD---------------DYPVFPISAVTRE 315 Query: 171 GVREVFEAATRASLMGKS 188 G+RE+ Sbjct: 316 GLRELLFEVANQLENTPE 333 >4TLD-A nrPDB Length = 253 Score = 31.0 bits (69), Expect = 0.41, Method: Composition-based stats. Identities = 13/48 (27%), Positives = 16/48 (33%) Query: 3 QQVGNSIRRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVAD 50 G I R ++ G GKT I F E P VF + Sbjct: 32 SHGGLPIGRSTLVSGTSGTGKTLFSIQFLYNGIIEFDEPGVFVTFEET 79 >4MKI-B nrPDB Length = 298 Score = 30.6 bits (68), Expect = 0.48, Method: Composition-based stats. Identities = 9/47 (19%), Positives = 21/47 (44%), Gaps = 5/47 (10%) Query: 15 IVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELA 61 I+G GK+ L+ + P+ + Y+ +++ ++V L Sbjct: 42 IIGHTGSGKSTLIQQL-----NGLLKPSKGKIYINGIDITDKKVSLK 83 >3S1A-A nrPDB Length = 525 Score = 30.6 bits (68), Expect = 0.48, Method: Composition-based stats. Identities = 13/48 (27%), Positives = 16/48 (33%) Query: 3 QQVGNSIRRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVAD 50 G I R ++ G GKT I F E P VF + Sbjct: 32 SHGGLPIGRSTLVSGTSGTGKTLFSIQFLYNGIIEFDEPGVFVTFEET 79 Score = 26.8 bits (58), Expect = 6.7, Method: Composition-based stats. Identities = 6/21 (28%), Positives = 10/21 (47%) Query: 13 LVIVGDGACGKTCLLIVFSKG 33 ++ G GKT L+ F + Sbjct: 284 ILATGATGTGKTLLVSRFVEN 304 >2GZA-A nrPDB Length = 361 Score = 30.6 bits (68), Expect = 0.52, Method: Composition-based stats. Identities = 11/54 (20%), Positives = 22/54 (40%), Gaps = 2/54 (3%) Query: 8 SIRRKLVIVGDGACGKTCLLIVFSKGQ-FPEVYVPTVFENYVADVEVDGRRVEL 60 + R +V+ G+ GKT L+ + F + + T+ + + V L Sbjct: 173 QLERVIVVAGETGSGKTTLMKALMQEIPFDQRLI-TIEDVPELFLPDHPNHVHL 225 >5X4B-A nrPDB Length = 162 Score = 30.6 bits (68), Expect = 0.54, Method: Composition-based stats. Identities = 20/124 (16%), Positives = 44/124 (35%), Gaps = 18/124 (14%) Query: 13 LVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFEN---YVADVEVDGR--RVELALWDTAG 67 + IVG GK+ + + + + V + + + L DT G Sbjct: 5 VAIVGRPNVGKSTIFNRIAGER-----ISIVEDTPGVTRDRIYSSAEWLNYDFNLIDTGG 59 Query: 68 QEDYDRLRPLSYPDS------NVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVPIILVG 121 + D +I F ++ + + E+ +A++L+ + P++L Sbjct: 60 IDIGDEPFLAQIRQQAEIAMDEADVIIFMVNGREGVTAADEE-VAKILYRTKK-PVVLAV 117 Query: 122 CKVD 125 K+D Sbjct: 118 NKLD 121 >4WQY-BZ nrPDB Length = 758 Score = 30.2 bits (67), Expect = 0.61, Method: Composition-based stats. Identities = 12/70 (17%), Positives = 22/70 (31%), Gaps = 4/70 (5%) Query: 56 RRVELALWDTAGQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGV 115 + + + DT G D+ S + ++ F + W + V Sbjct: 142 KDHRINIIDTPGHVDFTIEVERSMRVLDGAIVVFD-SSQGVEPQSETVWRQAEKYK---V 197 Query: 116 PIILVGCKVD 125 P I K+D Sbjct: 198 PRIAFANKMD 207 >2IW3-A nrPDB Length = 986 Score = 30.2 bits (67), Expect = 0.63, Method: Composition-based stats. Identities = 10/43 (23%), Positives = 20/43 (46%), Gaps = 5/43 (11%) Query: 8 SIRRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVAD 50 S+ ++ ++G GK+ L+ V + +PT E Y + Sbjct: 697 SLSSRIAVIGPNGAGKSTLINVLTG-----ELLPTSGEVYTHE 734 >4KV9-A nrPDB Length = 412 Score = 30.2 bits (67), Expect = 0.65, Method: Composition-based stats. Identities = 14/64 (21%), Positives = 27/64 (42%), Gaps = 9/64 (14%) Query: 11 RKLVIVGDGACGKTCLLIVFSKGQF---PEVYVPTVFENYVADVEVD----GRRVELALW 63 ++ VG+ GK+ LL +F P + T + + V D +++L + Sbjct: 42 FNILCVGETGIGKSTLLETLFNQKFDFSPSTHDLT--DPKLKAVTYDLKEANVKLKLTVV 99 Query: 64 DTAG 67 +T G Sbjct: 100 ETCG 103 >4MYH-A nrPDB Length = 598 Score = 30.2 bits (67), Expect = 0.66, Method: Composition-based stats. Identities = 12/51 (23%), Positives = 19/51 (37%), Gaps = 16/51 (31%) Query: 12 KLVIVGDGACGKTC---LLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVE 59 K IVG GK+ L+ F Y P + ++GR ++ Sbjct: 367 KTAIVGSSGSGKSTILKLVFRF--------YDPESG-----RILINGRDIK 404 >1ZCA-A nrPDB Length = 359 Score = 30.2 bits (67), Expect = 0.68, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 30/60 (50%), Gaps = 10/60 (16%) Query: 12 KLVIVGDGACGKTCLL--IVFSKGQ-FPE----VYVPTVFENYVA--DVEVDGRRVELAL 62 K++++G G GK+ L + G+ F + + T+F+N + V VD R +L + Sbjct: 37 KILLLGAGESGKSTFLKQMRIIHGREFDQKALLEFRDTIFDNILKGSRVLVDARD-KLGI 95 >4KXX-A nrPDB Length = 637 Score = 30.2 bits (67), Expect = 0.70, Method: Composition-based stats. Identities = 10/68 (14%), Positives = 17/68 (25%), Gaps = 4/68 (5%) Query: 125 DLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTG---YGVREVFE-AAT 180 DL V +++ +A + S Y E F+ Sbjct: 433 DLAMFRSVPTSTVFYPSDGVATEKAVELAANTKGICFIRTSRPENAIIYNNNEDFQVGQA 492 Query: 181 RASLMGKS 188 + L K Sbjct: 493 KVVLKSKD 500 >1WXQ-A nrPDB Length = 397 Score = 30.2 bits (67), Expect = 0.72, Method: Composition-based stats. Identities = 14/75 (18%), Positives = 29/75 (38%), Gaps = 13/75 (17%) Query: 101 QEKW-IAEVLHFCQGV-----PIILVGCKVDLRNDPQTIEQLRQEGQQ---PVTSQEGQS 151 KW ++L F + P+++ K D +D Q +R+E ++ + + Sbjct: 195 PTKWSQDDLLAFASEIRRVNKPMVIAANKADAASDEQIKRLVREEEKRGYIVIPTSAAAE 254 Query: 152 V----ADQIGATGYY 162 + A + G Y Sbjct: 255 LTLRKAAKAGFIEYI 269 >4V89-AW nrPDB Length = 534 Score = 29.9 bits (66), Expect = 0.73, Method: Composition-based stats. Identities = 18/86 (20%), Positives = 33/86 (38%), Gaps = 6/86 (6%) Query: 58 VELALWDTAGQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVPI 117 + L DT G ED+ + + L+ ID +E+ K + + + PI Sbjct: 82 CLVNLLDTPGHEDFSEDTYRTLTAVDCCLMV--IDAAKGVEDRTRKLME--VTRLRDTPI 137 Query: 118 ILVGCKVDLRNDPQTIEQLRQEGQQP 143 + K+D D + +L E + Sbjct: 138 LTFMNKLD--RDIRDPMELLDEVENE 161 >1ZE1-A nrPDB Length = 309 Score = 29.9 bits (66), Expect = 0.81, Method: Composition-based stats. Identities = 12/63 (19%), Positives = 29/63 (46%), Gaps = 3/63 (4%) Query: 104 WIAEVLHFCQGVPIILVGCKVDLRNDPQTIEQLRQEGQQPVTSQEGQ--SVADQIGATGY 161 W+ V+ + +IL G ++ L + + E + V ++EG+ ++A+ + + Sbjct: 228 WLPRVVVHQESTKMILNGSQIHLEMLKEWDGFKKGEVVR-VFNEEGRLLALAEAERNSSF 286 Query: 162 YEC 164 E Sbjct: 287 LET 289 >5JSZ-B nrPDB Length = 287 Score = 29.9 bits (66), Expect = 0.85, Method: Composition-based stats. Identities = 10/47 (21%), Positives = 18/47 (38%), Gaps = 10/47 (21%) Query: 13 LVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVE 59 + +VG GK+ L+ F + PT +E+ G + Sbjct: 36 IALVGHTGSGKSTLMQ-----HFNALLKPTSG-----KIEIAGYTIT 72 >5VHD-D nrPDB Length = 870 Score = 29.9 bits (66), Expect = 0.88, Method: Composition-based stats. Identities = 9/24 (37%), Positives = 12/24 (50%) Query: 14 VIVGDGACGKTCLLIVFSKGQFPE 37 VI G+ CGKT + F + E Sbjct: 80 VISGETGCGKTTQVTQFILDNYIE 103 >5IDV-A nrPDB Length = 279 Score = 29.9 bits (66), Expect = 0.91, Method: Composition-based stats. Identities = 9/50 (18%), Positives = 23/50 (46%), Gaps = 2/50 (4%) Query: 13 LVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELAL 62 + +VG GKT L+ + +F EV ++ + + +++ + + Sbjct: 68 VALVGRSGAGKTSLVNMLV--RFQEVSSGQIYLDDLPIRDIELSSLRTQI 115 >1R6B-X nrPDB Length = 758 Score = 29.9 bits (66), Expect = 0.93, Method: Composition-based stats. Identities = 10/30 (33%), Positives = 14/30 (46%), Gaps = 4/30 (13%) Query: 14 VIVGDGACGKTC----LLIVFSKGQFPEVY 39 ++VG+ GKT L +G PEV Sbjct: 211 LLVGESGVGKTAIAEGLAWRIVQGDVPEVM 240 >5AR1-A nrPDB Length = 303 Score = 29.5 bits (65), Expect = 0.98, Method: Composition-based stats. Identities = 14/73 (19%), Positives = 26/73 (35%), Gaps = 15/73 (20%) Query: 9 IRRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVD-------------- 54 I ++IVG G++ + Q + T+ E+D Sbjct: 26 ITFTVMIVGQSGSGRSTFINTLCGQQVVDTS-TTILLPTDTSTEIDLQLREETVELEDDE 84 Query: 55 GRRVELALWDTAG 67 G +++L + DT G Sbjct: 85 GVKIQLNIIDTPG 97 >3B5X-A nrPDB Length = 582 Score = 29.5 bits (65), Expect = 1.0, Method: Composition-based stats. Identities = 5/20 (25%), Positives = 12/20 (60%) Query: 13 LVIVGDGACGKTCLLIVFSK 32 + +VG GK+ + +F++ Sbjct: 372 VALVGRSGSGKSTIANLFTR 391 >5MKK-A nrPDB Length = 611 Score = 29.5 bits (65), Expect = 1.1, Method: Composition-based stats. Identities = 12/45 (26%), Positives = 18/45 (40%), Gaps = 11/45 (24%) Query: 12 KLVIVGDGACGKT---CLLIVFSKGQFPEVYVPTVFENYVADVEV 53 K+ +VG GKT L+ F Y P ++ V+V Sbjct: 387 KVALVGATGAGKTSVVSLIARF--------YDPQRGCVFLDGVDV 423 >4RY2-A nrPDB Length = 730 Score = 29.5 bits (65), Expect = 1.2, Method: Composition-based stats. Identities = 10/47 (21%), Positives = 19/47 (40%), Gaps = 10/47 (21%) Query: 13 LVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVE 59 + IVG+ GKT L + Y P + + ++G ++ Sbjct: 518 VAIVGESGSGKTTLAKLLMN-----FYSPEKGD-----ILINGHSIK 554 >2P8Y-T nrPDB Length = 842 Score = 29.5 bits (65), Expect = 1.2, Method: Composition-based stats. Identities = 17/98 (17%), Positives = 35/98 (35%), Gaps = 12/98 (12%) Query: 54 DGRRVELALWDTAGQEDYDRLRPLSYPDSNVVLICFSIDLP---DSLENVQEKWIAEVLH 110 DG + L D+ G D+ + ++ L+ + +++ + Sbjct: 94 DGNSFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDTIEGVCVQTETVLRQALGERIK- 152 Query: 111 FCQGVPIILVGCKVD--LRNDPQTIEQLRQEGQQPVTS 146 P++++ KVD L + E L Q + V S Sbjct: 153 -----PVVVI-NKVDRALLELQVSKEDLYQTFARTVES 184 >5OFO-C nrPDB Length = 871 Score = 29.5 bits (65), Expect = 1.2, Method: Composition-based stats. Identities = 9/28 (32%), Positives = 13/28 (46%), Gaps = 4/28 (14%) Query: 14 VIVGDGACGKTC----LLIVFSKGQFPE 37 V++G+ GKT L G+ PE Sbjct: 207 VLIGEPGVGKTAIVEGLAQRIINGEVPE 234 >3FVQ-A nrPDB Length = 359 Score = 29.1 bits (64), Expect = 1.3, Method: Composition-based stats. Identities = 9/19 (47%), Positives = 11/19 (57%) Query: 13 LVIVGDGACGKTCLLIVFS 31 L I+G CGKT LL + Sbjct: 33 LFIIGASGCGKTTLLRCLA 51 >4CIU-A nrPDB Length = 727 Score = 29.1 bits (64), Expect = 1.3, Method: Composition-based stats. Identities = 9/28 (32%), Positives = 13/28 (46%), Gaps = 4/28 (14%) Query: 14 VIVGDGACGKTC----LLIVFSKGQFPE 37 V++G+ GKT L G+ PE Sbjct: 61 VLIGEPGVGKTAIVEGLAQRIINGEVPE 88 >3BE4-A nrPDB Length = 217 Score = 29.1 bits (64), Expect = 1.3, Method: Composition-based stats. Identities = 12/56 (21%), Positives = 26/56 (46%), Gaps = 3/56 (5%) Query: 6 GNSIRRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELA 61 GNS + L+++G GK F K ++ ++ T + + + +G ++ L Sbjct: 1 GNSKKHNLILIGAPGSGKGTQCE-FIKKEYGLAHLSTG--DMLREAIKNGTKIGLE 53 >1QVR-A nrPDB Length = 854 Score = 29.1 bits (64), Expect = 1.3, Method: Composition-based stats. Identities = 10/28 (35%), Positives = 13/28 (46%), Gaps = 4/28 (14%) Query: 14 VIVGDGACGKTC----LLIVFSKGQFPE 37 V++G+ GKT L KG PE Sbjct: 195 VLIGEPGVGKTAIVEGLAQRIVKGDVPE 222 >6FEC-S nrPDB Length = 422 Score = 29.1 bits (64), Expect = 1.3, Method: Composition-based stats. Identities = 20/91 (21%), Positives = 33/91 (36%), Gaps = 16/91 (17%) Query: 94 PDSLENVQEKWIAEVLHFCQGVPIILVGCKVDLRNDPQTIEQLRQEGQQPV-TSQEGQSV 152 P + E++ I ++ H I+++ K+DL + Q EQ Q T EG Sbjct: 130 PQTSEHLAAIEIMKLKH------ILILQNKIDLVKESQAKEQYEQILAFVQGTVAEG--- 180 Query: 153 ADQIGATGYYECSAKTGYGVREVFEAATRAS 183 SA+ Y + V E + Sbjct: 181 ------APIIPISAQLKYNIEVVCEYIVKKI 205 >6O81-S nrPDB Length = 472 Score = 29.1 bits (64), Expect = 1.3, Method: Composition-based stats. Identities = 20/91 (21%), Positives = 33/91 (36%), Gaps = 16/91 (17%) Query: 94 PDSLENVQEKWIAEVLHFCQGVPIILVGCKVDLRNDPQTIEQLRQEGQQPV-TSQEGQSV 152 P + E++ I ++ H I+++ K+DL + Q EQ Q T EG Sbjct: 168 PQTSEHLAAIEIMKLKH------ILILQNKIDLVKESQAKEQYEQILAFVQGTVAEG--- 218 Query: 153 ADQIGATGYYECSAKTGYGVREVFEAATRAS 183 SA+ Y + V E + Sbjct: 219 ------APIIPISAQLKYNIEVVCEYIVKKI 243 >6I3O-A nrPDB Length = 677 Score = 29.1 bits (64), Expect = 1.3, Method: Composition-based stats. Identities = 6/19 (31%), Positives = 11/19 (57%) Query: 13 LVIVGDGACGKTCLLIVFS 31 L++VG+ GKT + + Sbjct: 31 LIVVGETGSGKTTQVTQYL 49 >5MRE-WW nrPDB Length = 401 Score = 29.1 bits (64), Expect = 1.3, Method: Composition-based stats. Identities = 8/19 (42%), Positives = 11/19 (57%) Query: 11 RKLVIVGDGACGKTCLLIV 29 +K +I G+ GKT LL Sbjct: 95 KKFIITGEPGVGKTVLLSQ 113 >2NQL-A nrPDB Length = 388 Score = 29.1 bits (64), Expect = 1.3, Method: Composition-based stats. Identities = 10/18 (55%), Positives = 12/18 (66%) Query: 60 LALWDTAGQEDYDRLRPL 77 +ALWD AGQE +R L Sbjct: 128 IALWDIAGQEAGKSIRDL 145 >5H7J-A nrPDB Length = 743 Score = 29.1 bits (64), Expect = 1.4, Method: Composition-based stats. Identities = 18/96 (18%), Positives = 37/96 (38%), Gaps = 12/96 (12%) Query: 54 DGRRVELALWDTAGQEDYDRLRPLSYPDSNVVLICFSIDL---PDSLENVQEKWIAEVLH 110 +G+ + L DT G D+ + + V+I P + V++ V Sbjct: 87 EGKDYLINLIDTPGHVDFGGDVTRAMRAIDGVIIVVDAVEGVMPQTETVVRQALREYVK- 145 Query: 111 FCQGVPIILVGCKVD--LRNDPQTIEQLRQEGQQPV 144 P++ + KVD +R T +Q+ + + + Sbjct: 146 -----PVLFI-NKVDRLIRELKLTPQQMMERFSKII 175 >1JBK-A nrPDB Length = 195 Score = 29.1 bits (64), Expect = 1.4, Method: Composition-based stats. Identities = 9/28 (32%), Positives = 13/28 (46%), Gaps = 4/28 (14%) Query: 14 VIVGDGACGKTC----LLIVFSKGQFPE 37 V++G+ GKT L G+ PE Sbjct: 47 VLIGEPGVGKTAIVEGLAQRIINGEVPE 74 >4YPL-A nrPDB Length = 555 Score = 29.1 bits (64), Expect = 1.5, Method: Composition-based stats. Identities = 8/14 (57%), Positives = 9/14 (64%) Query: 13 LVIVGDGACGKTCL 26 LV+VG GKT L Sbjct: 113 LVLVGPPGVGKTSL 126 >4RI0-A nrPDB Length = 332 Score = 29.1 bits (64), Expect = 1.5, Method: Composition-based stats. Identities = 16/71 (22%), Positives = 29/71 (40%), Gaps = 8/71 (11%) Query: 109 LHFCQGVPIILVGCKVDLRNDPQTIEQLRQEG-QQPVTS-------QEGQSVADQIGATG 160 +H + +P++L+G DLR + Q VT+ +EG+ + + Sbjct: 104 IHPKKKLPVLLLGHSADLRPGEFVVAIGSPFALQNTVTTGIVSTAQREGRELGLRDSDMD 163 Query: 161 YYECSAKTGYG 171 Y + A YG Sbjct: 164 YIQTDAIINYG 174 >3LLM-A nrPDB Length = 235 Score = 29.1 bits (64), Expect = 1.5, Method: Composition-based stats. Identities = 8/26 (30%), Positives = 12/26 (46%) Query: 13 LVIVGDGACGKTCLLIVFSKGQFPEV 38 ++I G CGKT + F F + Sbjct: 79 VIIRGATGCGKTTQVPQFILDDFIQN 104 >6QUZ-B nrPDB Length = 599 Score = 29.1 bits (64), Expect = 1.5, Method: Composition-based stats. Identities = 9/23 (39%), Positives = 13/23 (56%), Gaps = 3/23 (13%) Query: 11 RKLVIVGDGACGKTC---LLIVF 30 +K+ +VG GKT LL+ F Sbjct: 382 QKVALVGPTGSGKTTIVNLLMRF 404 >2YV5-A nrPDB Length = 302 Score = 29.1 bits (64), Expect = 1.5, Method: Composition-based stats. Identities = 4/22 (18%), Positives = 10/22 (45%) Query: 13 LVIVGDGACGKTCLLIVFSKGQ 34 ++ G GK+ +L + + Sbjct: 168 CILAGPSGVGKSSILSRLTGEE 189 >5GM6-Y nrPDB Length = 876 Score = 29.1 bits (64), Expect = 1.5, Method: Composition-based stats. Identities = 9/40 (22%), Positives = 16/40 (40%), Gaps = 1/40 (2%) Query: 13 LVIVGDGACGKTCLLIVF-SKGQFPEVYVPTVFENYVADV 51 L+I+G+ GKT L + + F + + V Sbjct: 242 LIIMGETGSGKTTQLPQYLVEDGFTDQGKLQIAITQPRRV 281 >5ZME-A nrPDB Length = 687 Score = 29.1 bits (64), Expect = 1.6, Method: Composition-based stats. Identities = 8/25 (32%), Positives = 15/25 (60%), Gaps = 1/25 (4%) Query: 3 QQVGNSIRRKLVIV-GDGACGKTCL 26 +++ +RK +++ G G GKT L Sbjct: 4 EELAAGQQRKYIMISGKGGVGKTSL 28 >6ED3-A nrPDB Length = 848 Score = 28.7 bits (63), Expect = 1.6, Method: Composition-based stats. Identities = 10/37 (27%), Positives = 14/37 (37%), Gaps = 5/37 (13%) Query: 14 VIVGDGACGKTC----LLIVFSKGQFPEVY-VPTVFE 45 V++G+ GKT L G PE T+ Sbjct: 203 VLIGEPGVGKTAIVEGLAQRIVAGDVPESLRDKTIVA 239 >6G2G-A nrPDB Length = 310 Score = 28.7 bits (63), Expect = 1.7, Method: Composition-based stats. Identities = 6/19 (31%), Positives = 10/19 (52%) Query: 13 LVIVGDGACGKTCLLIVFS 31 LV+ G G GK+ + + Sbjct: 11 LVLSGKGGVGKSSVTTQLA 29 >4N1A-A nrPDB Length = 589 Score = 28.7 bits (63), Expect = 1.7, Method: Composition-based stats. Identities = 12/42 (28%), Positives = 18/42 (42%), Gaps = 5/42 (11%) Query: 14 VIVGDGACGKTCLLIVFSKGQFPEVYVPT----VFENYVADV 51 ++ GD CGK+ LL E Y P +F +Y + Sbjct: 387 LVFGDTECGKSNLL-RLITAGIIERYTPQQARLIFIDYSRSL 427 >5H7K-A nrPDB Length = 397 Score = 28.7 bits (63), Expect = 1.8, Method: Composition-based stats. Identities = 18/96 (18%), Positives = 37/96 (38%), Gaps = 12/96 (12%) Query: 54 DGRRVELALWDTAGQEDYDRLRPLSYPDSNVVLICFSIDL---PDSLENVQEKWIAEVLH 110 +G+ + L DT G D+ + + V+I P + V++ V Sbjct: 87 EGKDYLINLIDTPGHVDFGGDVTRAMRAIDGVIIVVDAVEGVMPQTETVVRQALREYVK- 145 Query: 111 FCQGVPIILVGCKVD--LRNDPQTIEQLRQEGQQPV 144 P++ + KVD +R T +Q+ + + + Sbjct: 146 -----PVLFI-NKVDRLIRELKLTPQQMMERFSKII 175 >4YPN-A nrPDB Length = 293 Score = 28.7 bits (63), Expect = 1.8, Method: Composition-based stats. Identities = 8/14 (57%), Positives = 9/14 (64%) Query: 13 LVIVGDGACGKTCL 26 LV+VG GKT L Sbjct: 146 LVLVGPPGVGKTSL 159 >5D4W-A nrPDB Length = 926 Score = 28.7 bits (63), Expect = 1.8, Method: Composition-based stats. Identities = 5/14 (35%), Positives = 10/14 (71%) Query: 14 VIVGDGACGKTCLL 27 V++G+ GKT ++ Sbjct: 220 VLIGEPGVGKTTIV 233 >3D0O-A nrPDB Length = 317 Score = 28.7 bits (63), Expect = 1.8, Method: Composition-based stats. Identities = 9/53 (16%), Positives = 21/53 (39%), Gaps = 10/53 (18%) Query: 12 KLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWD 64 K+V++G+GA G + + + +++D +V + D Sbjct: 8 KVVLIGNGAVG-SSYAFSLVNQSIVDE---------LVIIDLDTEKVRGDVMD 50 >4HSE-A nrPDB Length = 397 Score = 28.7 bits (63), Expect = 1.9, Method: Composition-based stats. Identities = 10/28 (35%), Positives = 13/28 (46%), Gaps = 4/28 (14%) Query: 14 VIVGDGACGKTC----LLIVFSKGQFPE 37 V++G+ GKT L KG PE Sbjct: 58 VLIGEPGVGKTAIVEGLAQRIVKGDVPE 85 >3GD7-A nrPDB Length = 390 Score = 28.7 bits (63), Expect = 1.9, Method: Composition-based stats. Identities = 12/63 (19%), Positives = 26/63 (41%), Gaps = 16/63 (25%) Query: 11 RKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDTAGQED 70 +++ ++G GK+ LL F + N ++++DG WD+ E Sbjct: 48 QRVGLLGRTGSGKSTLLSAFLR-----------LLNTEGEIQIDGVS-----WDSITLEQ 91 Query: 71 YDR 73 + + Sbjct: 92 WRK 94 >2QU8-A nrPDB Length = 228 Score = 28.7 bits (63), Expect = 1.9, Method: Composition-based stats. Identities = 13/63 (20%), Positives = 26/63 (41%), Gaps = 3/63 (4%) Query: 7 NSIRRKLVIVGDGACGKTCLLIVFSK-GQFPEVYVPTVFENYVADVEVDGRRVELALWDT 65 N ++ +++ G GK+ + + S+ + Y T YV D + + + DT Sbjct: 26 NPHKKTIILSGAPNVGKSSFMNIVSRANVDVQSYSFTTKNLYVGHF--DHKLNKYQIIDT 83 Query: 66 AGQ 68 G Sbjct: 84 PGL 86 >1YR7-A nrPDB Length = 262 Score = 28.7 bits (63), Expect = 2.1, Method: Composition-based stats. Identities = 9/31 (29%), Positives = 13/31 (41%), Gaps = 3/31 (9%) Query: 13 LVIVGDGACGKTCLL---IVFSKGQFPEVYV 40 +V VG GKT L + + + YV Sbjct: 17 VVFVGTAGSGKTTLTGEFGRYLEDNYKVAYV 47 >3N5F-A nrPDB Length = 408 Score = 28.7 bits (63), Expect = 2.1, Method: Composition-based stats. Identities = 9/61 (14%), Positives = 18/61 (29%), Gaps = 10/61 (16%) Query: 65 TAGQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVPIILVGCKV 124 TA + L ++ + + E+ I ++LVG + Sbjct: 31 TAEERRAKDLVASYMREAGLFV----------YEDAAGNLIGRKEGTNPDATVVLVGSHL 80 Query: 125 D 125 D Sbjct: 81 D 81 >6HA8-V nrPDB Length = 548 Score = 28.3 bits (62), Expect = 2.1, Method: Composition-based stats. Identities = 8/23 (34%), Positives = 12/23 (52%) Query: 12 KLVIVGDGACGKTCLLIVFSKGQ 34 K+ I+G GKT LL + + Sbjct: 325 KVAIIGPNGSGKTTLLNIILGQE 347 >1IY1-A nrPDB Length = 254 Score = 28.3 bits (62), Expect = 2.2, Method: Composition-based stats. Identities = 17/64 (26%), Positives = 30/64 (46%), Gaps = 3/64 (4%) Query: 4 QVGNSIRRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYV-ADVEVDGRRVELAL 62 ++G I + +++VG GKT L G+ ++ ++V V V RV L Sbjct: 43 EMGARIPKGVLLVGPPGVGKTHLA-RAVAGEARVPFITASGSDFVEMFVGVGAARVR-DL 100 Query: 63 WDTA 66 ++TA Sbjct: 101 FETA 104 >4Q7L-A nrPDB Length = 256 Score = 28.3 bits (62), Expect = 2.2, Method: Composition-based stats. Identities = 9/23 (39%), Positives = 13/23 (56%), Gaps = 3/23 (13%) Query: 11 RKLVIVGDGACGKTC---LLIVF 30 +K+ +VG GKT LL+ F Sbjct: 32 QKVALVGPTGSGKTTIVNLLMRF 54 >1U0L-A nrPDB Length = 301 Score = 28.3 bits (62), Expect = 2.2, Method: Composition-based stats. Identities = 19/103 (18%), Positives = 46/103 (44%), Gaps = 17/103 (16%) Query: 74 LRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVPIILVGCKVDLRNDPQTI 133 L + + V++ ++ +P++ + +K++ VL + ++V K+DL + Sbjct: 77 LTKPHVANVDQVILVVTVKMPETSTYIIDKFL--VLAEKNELETVMVINKMDLYD----- 129 Query: 134 EQLRQEGQQPVTSQEGQSVADQI-GATGYYECSAKTGYGVREV 175 ++ + V + + + G + SAKTG G+ E+ Sbjct: 130 ----EDDLRKV-----RELEEIYSGLYPIVKTSAKTGMGIEEL 163 >6H7G-A nrPDB Length = 346 Score = 28.3 bits (62), Expect = 2.2, Method: Composition-based stats. Identities = 7/24 (29%), Positives = 12/24 (50%), Gaps = 3/24 (12%) Query: 12 KLVIVG---DGACGKTCLLIVFSK 32 K V++G D CGK+ + + Sbjct: 6 KTVVIGLAADSGCGKSTFMRRMTS 29 >6OIK-A nrPDB Length = 354 Score = 28.3 bits (62), Expect = 2.2, Method: Composition-based stats. Identities = 17/91 (18%), Positives = 36/91 (39%), Gaps = 17/91 (18%) Query: 12 KLVIVGDGACGKTCLLIVF-------SKGQFPEVYVPTVFENYVADVEVDGRRVELALWD 64 KL+++G G GK+ ++ G+ + Y P V+ N + + + D Sbjct: 35 KLLLLGAGESGKSTIVKQMKIIHEDGFSGEDVKQYKPVVYSNTIQSLA-----AIVRAMD 89 Query: 65 TAGQEDYDRLRPLSYPDSNVVLICFSIDLPD 95 T G E D+ ++ ++C + + Sbjct: 90 TLGIEYGDKE-----RKADAKMVCDVVSRME 115 >6D00-1 nrPDB Length = 883 Score = 28.3 bits (62), Expect = 2.2, Method: Composition-based stats. Identities = 9/29 (31%), Positives = 11/29 (37%), Gaps = 4/29 (13%) Query: 14 VIVGDGACGKTC----LLIVFSKGQFPEV 38 +VG+ GKT L KG P Sbjct: 203 CLVGEPGVGKTAIAEGLANRIVKGDIPSS 231 >2ZBL-A nrPDB Length = 421 Score = 28.3 bits (62), Expect = 2.2, Method: Composition-based stats. Identities = 11/61 (18%), Positives = 16/61 (26%), Gaps = 20/61 (32%) Query: 60 LALWDTAGQEDYDRLRPLSYPDSNV-------VLICFSIDLPDSLENVQEKWIAEVLHFC 112 L WD E + + Y N LI + + KW+ L Sbjct: 155 LESWD----EAFSQTED--YRGGNANMHAVEAFLIVYDVTHDK-------KWLDRALRIA 201 Query: 113 Q 113 Sbjct: 202 S 202 >5CA8-A nrPDB Length = 692 Score = 28.3 bits (62), Expect = 2.3, Method: Composition-based stats. Identities = 9/34 (26%), Positives = 14/34 (41%), Gaps = 1/34 (2%) Query: 3 QQVGNSIRRKLVIVGDGACGKTCLLIVFSKGQFP 36 VGN+ + + G + GK+ LL F Sbjct: 52 ADVGNNYHI-ISVFGSQSTGKSTLLNRLFNTNFD 84 >3PV0-A nrPDB Length = 381 Score = 28.3 bits (62), Expect = 2.3, Method: Composition-based stats. Identities = 8/15 (53%), Positives = 10/15 (66%) Query: 13 LVIVGDGACGKTCLL 27 +V VG CGK+ LL Sbjct: 32 VVFVGPSGCGKSTLL 46 >3J3U-A nrPDB Length = 810 Score = 28.3 bits (62), Expect = 2.3, Method: Composition-based stats. Identities = 8/28 (28%), Positives = 12/28 (42%), Gaps = 4/28 (14%) Query: 14 VIVGDGACGKTC----LLIVFSKGQFPE 37 V++G+ GKT L + PE Sbjct: 205 VLIGEPGVGKTAIAEGLAQQIINNEVPE 232 >2PJZ-A nrPDB Length = 263 Score = 28.3 bits (62), Expect = 2.4, Method: Composition-based stats. Identities = 8/16 (50%), Positives = 11/16 (68%) Query: 12 KLVIVGDGACGKTCLL 27 K++I+G GKT LL Sbjct: 32 KVIILGPNGSGKTTLL 47 >4AC9-A nrPDB Length = 482 Score = 28.3 bits (62), Expect = 2.4, Method: Composition-based stats. Identities = 14/62 (22%), Positives = 23/62 (37%), Gaps = 7/62 (11%) Query: 114 GVPIILVGCKVDLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVR 173 +PII+V K D + ++ + + SAKTG+GV Sbjct: 125 NIPIIVVITKSDNAGTEEIKRTEMIMKSILQSTH-------NLKNSSIIPISAKTGFGVD 177 Query: 174 EV 175 E+ Sbjct: 178 EL 179 >3PXG-A nrPDB Length = 468 Score = 28.3 bits (62), Expect = 2.4, Method: Composition-based stats. Identities = 8/28 (28%), Positives = 12/28 (42%), Gaps = 4/28 (14%) Query: 14 VIVGDGACGKTC----LLIVFSKGQFPE 37 V++G+ GKT L + PE Sbjct: 205 VLIGEPGVGKTAIAEGLAQQIINNEVPE 232 >2KHQ-A nrPDB Length = 110 Score = 28.3 bits (62), Expect = 2.4, Method: Composition-based stats. Identities = 13/65 (20%), Positives = 23/65 (35%) Query: 130 PQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRASLMGKSK 189 + R + + + E Q ++ G T YE K +R F+ A + K+ Sbjct: 33 KHIKDHFRHKLLKDIKRTEYQKFLNEYGLTHSYETIRKLNSYIRNAFDDAIHEGYVIKNP 92 Query: 190 TNGKA 194 T Sbjct: 93 TYKAE 97 >3PXI-A nrPDB Length = 758 Score = 28.3 bits (62), Expect = 2.5, Method: Composition-based stats. Identities = 8/28 (28%), Positives = 12/28 (42%), Gaps = 4/28 (14%) Query: 14 VIVGDGACGKTC----LLIVFSKGQFPE 37 V++G+ GKT L + PE Sbjct: 205 VLIGEPGVGKTAIAEGLAQQIINNEVPE 232 >5NIK-J nrPDB Length = 654 Score = 28.3 bits (62), Expect = 2.5, Method: Composition-based stats. Identities = 6/16 (37%), Positives = 9/16 (56%) Query: 13 LVIVGDGACGKTCLLI 28 + IVG GK+ L+ Sbjct: 37 VAIVGASGSGKSTLMN 52 >2DHR-A nrPDB Length = 499 Score = 28.3 bits (62), Expect = 2.5, Method: Composition-based stats. Identities = 17/64 (26%), Positives = 30/64 (46%), Gaps = 3/64 (4%) Query: 4 QVGNSIRRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYV-ADVEVDGRRVELAL 62 ++G I + +++VG GKT L G+ ++ ++V V V RV L Sbjct: 58 EMGARIPKGVLLVGPPGVGKTHLA-RAVAGEARVPFITASGSDFVEMFVGVGAARVR-DL 115 Query: 63 WDTA 66 ++TA Sbjct: 116 FETA 119 >1Z6G-A nrPDB Length = 218 Score = 28.3 bits (62), Expect = 2.5, Method: Composition-based stats. Identities = 12/46 (26%), Positives = 17/46 (36%), Gaps = 1/46 (2%) Query: 13 LVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRV 58 LVI G GK L+ +FP + +V E + V Sbjct: 26 LVICGPSGVGKGTLIKKLL-NEFPNYFYFSVSCTTRKKREKEKEGV 70 >4XGC-D nrPDB Length = 459 Score = 28.3 bits (62), Expect = 2.6, Method: Composition-based stats. Identities = 8/32 (25%), Positives = 15/32 (46%), Gaps = 2/32 (6%) Query: 2 SQQVGNSIRRKLVIVGDGACGKTCLLIVFSKG 33 + ++G S L+++G GKT L+ Sbjct: 43 TAEMGESNS--LLLLGPRGSGKTTLINSVLAD 72 >4HZI-A nrPDB Length = 294 Score = 28.3 bits (62), Expect = 2.7, Method: Composition-based stats. Identities = 13/66 (19%), Positives = 26/66 (39%), Gaps = 18/66 (27%) Query: 13 LVIVGDGACGKTCLLIVF------SKGQ---FPEVYVPTVFENYVADVEVDGRRVELALW 63 V++G GK+ L+ + + G F E Y ++ + R + + Sbjct: 63 CVLLGRNGAGKSTLVNLIYGMIWATSGTIRLFQETYG---------EIAIQDLRKRIGIL 113 Query: 64 DTAGQE 69 D++ QE Sbjct: 114 DSSQQE 119 >5LJA-A nrPDB Length = 231 Score = 28.3 bits (62), Expect = 2.7, Method: Composition-based stats. Identities = 6/16 (37%), Positives = 9/16 (56%) Query: 13 LVIVGDGACGKTCLLI 28 + IVG GK+ L+ Sbjct: 37 VAIVGASGSGKSTLMN 52 >4QJ3-A nrPDB Length = 379 Score = 28.3 bits (62), Expect = 2.7, Method: Composition-based stats. Identities = 31/182 (17%), Positives = 51/182 (28%), Gaps = 32/182 (17%) Query: 36 PEVYVPTVFENYVADVEVDG--------RRVELALWDTAGQ--EDYDRLRPLSYPDSNVV 85 Y+PT + V G + V + D GQ E + S + Sbjct: 189 DPSYLPTQQDVLRVRVPTTGIIEYPFDLQSVIFRMVDVGGQRSERRKWIHCFENVTSIMF 248 Query: 86 LICFSIDLPDSLENVQEKWIAE-------VLHFC--QGVPIILVGCKVDLRNDPQTIEQL 136 L+ S +E+ E + E ++ + Q +IL K DL + L Sbjct: 249 LVALSEYDQVLVESDNENRMEESKALFRTIITYPWFQNSSVILFLNKKDLLEEKIMYSHL 308 Query: 137 RQEGQQPVTSQEGQSVADQIGATGYYE-------------CSAKTGYGVREVFEAATRAS 183 + Q A + + + A +R VF A Sbjct: 309 VDYFPEYDGPQRDAQAAREFILKMFVDLNPDSDKIIYSHFTCATDTENIRFVFAAVKDTI 368 Query: 184 LM 185 L Sbjct: 369 LQ 370 >2BCJ-Q nrPDB Length = 353 Score = 27.9 bits (61), Expect = 2.8, Method: Composition-based stats. Identities = 31/182 (17%), Positives = 51/182 (28%), Gaps = 32/182 (17%) Query: 36 PEVYVPTVFENYVADVEVDG--------RRVELALWDTAGQ--EDYDRLRPLSYPDSNVV 85 Y+PT + V G + V + D GQ E + S + Sbjct: 163 DPSYLPTQQDVLRVRVPTTGIIEYPFDLQSVIFRMVDVGGQRSERRKWIHCFENVTSIMF 222 Query: 86 LICFSIDLPDSLENVQEKWIAE-------VLHFC--QGVPIILVGCKVDLRNDPQTIEQL 136 L+ S +E+ E + E ++ + Q +IL K DL + L Sbjct: 223 LVALSEYDQVLVESDNENRMEESKALFRTIITYPWFQNSSVILFLNKKDLLEEKIMYSHL 282 Query: 137 RQEGQQPVTSQEGQSVADQIGATGYYE-------------CSAKTGYGVREVFEAATRAS 183 + Q A + + + A +R VF A Sbjct: 283 VDYFPEYDGPQRDAQAAREFILKMFVDLNPDSDKIIYSHFTCATDTENIRFVFAAVKDTI 342 Query: 184 LM 185 L Sbjct: 343 LQ 344 >2P4Q-A nrPDB Length = 497 Score = 27.9 bits (61), Expect = 2.9, Method: Composition-based stats. Identities = 8/26 (30%), Positives = 15/26 (57%) Query: 43 VFENYVADVEVDGRRVELALWDTAGQ 68 + + + +VDG+ + + DTAGQ Sbjct: 241 ITRDILKFDDVDGKPLVEKIMDTAGQ 266 >2OCP-A nrPDB Length = 241 Score = 27.9 bits (61), Expect = 2.9, Method: Composition-based stats. Identities = 11/32 (34%), Positives = 17/32 (53%), Gaps = 1/32 (3%) Query: 11 RKLVIVGDGACGKTCLLIVFSKGQFPEVYVPT 42 R+L I G+ A GK+ + +PE +V T Sbjct: 3 RRLSIEGNIAVGKSTFV-KLLTKTYPEWHVAT 33 >2QAG-B nrPDB Length = 427 Score = 27.9 bits (61), Expect = 2.9, Method: Composition-based stats. Identities = 6/28 (21%), Positives = 12/28 (42%) Query: 11 RKLVIVGDGACGKTCLLIVFSKGQFPEV 38 ++ VG+ GK+ L+ +F Sbjct: 43 FNILCVGETGLGKSTLMDTLFNTKFEGE 70 >3VX4-A nrPDB Length = 273 Score = 27.9 bits (61), Expect = 2.9, Method: Composition-based stats. Identities = 7/16 (43%), Positives = 9/16 (56%) Query: 12 KLVIVGDGACGKTCLL 27 K+ +VG GKT L Sbjct: 63 KVSLVGASGSGKTTLA 78 >2RGK-A nrPDB Length = 421 Score = 27.9 bits (61), Expect = 2.9, Method: Composition-based stats. Identities = 10/61 (16%), Positives = 16/61 (26%), Gaps = 20/61 (32%) Query: 60 LALWDTAGQEDYDRLRPLSYPDSNV-------VLICFSIDLPDSLENVQEKWIAEVLHFC 112 L WD E + + Y N LI + + KW+ + Sbjct: 155 LESWD----EAFSKTEE--YRGGNANMHAVEAFLIVYDVTHDK-------KWLDRAIRVA 201 Query: 113 Q 113 Sbjct: 202 S 202 >2BDT-A nrPDB Length = 189 Score = 27.9 bits (61), Expect = 3.0, Method: Composition-based stats. Identities = 9/47 (19%), Positives = 17/47 (36%), Gaps = 4/47 (8%) Query: 10 RRKLVIV-GDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDG 55 +KL I+ G GK+ + Y + + + + V G Sbjct: 1 MKKLYIITGPAGVGKSTTCKRLAAQLDNSAY---IEGDIINHMVVGG 44 >5GKO-A nrPDB Length = 671 Score = 27.9 bits (61), Expect = 3.1, Method: Composition-based stats. Identities = 6/16 (37%), Positives = 9/16 (56%) Query: 13 LVIVGDGACGKTCLLI 28 + IVG GK+ L+ Sbjct: 46 VAIVGQSGSGKSTLMN 61 >2IT1-A nrPDB Length = 362 Score = 27.9 bits (61), Expect = 3.1, Method: Composition-based stats. Identities = 10/47 (21%), Positives = 18/47 (38%), Gaps = 10/47 (21%) Query: 13 LVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVE 59 + ++G GK+ LL + +Y PT + D + V Sbjct: 32 MALLGPSGSGKSTLLYTIAG-----IYKPTSG-----KIYFDEKDVT 68 >6QUZ-A nrPDB Length = 587 Score = 27.9 bits (61), Expect = 3.2, Method: Composition-based stats. Identities = 12/49 (24%), Positives = 23/49 (46%), Gaps = 7/49 (14%) Query: 13 LVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELA 61 + ++G+ GK+ L+ + + PE V + E+D R V+L Sbjct: 372 VAVLGETGSGKSTLMNLIPRLIDPERGR--VEVD-----ELDVRTVKLK 413 >5LKM-A nrPDB Length = 452 Score = 27.9 bits (61), Expect = 3.2, Method: Composition-based stats. Identities = 9/21 (42%), Positives = 13/21 (61%), Gaps = 1/21 (4%) Query: 13 LVIVG-DGACGKTCLLIVFSK 32 LV++G D GK+ LL+ S Sbjct: 90 LVLIGGDPGIGKSTLLLQVST 110 >6FA9-A nrPDB Length = 655 Score = 27.9 bits (61), Expect = 3.2, Method: Composition-based stats. Identities = 6/20 (30%), Positives = 11/20 (55%) Query: 13 LVIVGDGACGKTCLLIVFSK 32 L++VG+ GKT + + Sbjct: 50 LILVGETGSGKTTQIPQYLH 69 >5DO7-A nrPDB Length = 666 Score = 27.9 bits (61), Expect = 3.5, Method: Composition-based stats. Identities = 7/15 (46%), Positives = 9/15 (60%) Query: 13 LVIVGDGACGKTCLL 27 + I+G GKT LL Sbjct: 82 MCILGSSGSGKTTLL 96 >1S0U-A nrPDB Length = 408 Score = 27.9 bits (61), Expect = 3.5, Method: Composition-based stats. Identities = 14/80 (17%), Positives = 26/80 (32%), Gaps = 9/80 (11%) Query: 117 IILVGCKVDLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVF 176 II+V K+DL ++ Q E Q + V ++ SA + V Sbjct: 138 IIIVQNKIDLVDEKQAEENYEQIKE-FVKGTIAEN-------APIIPISAHHEANID-VL 188 Query: 177 EAATRASLMGKSKTNGKAKK 196 A + + + + Sbjct: 189 LKAIQDFIPTPKRDPDATPR 208 >5D0U-A nrPDB Length = 714 Score = 27.9 bits (61), Expect = 3.5, Method: Composition-based stats. Identities = 7/19 (36%), Positives = 10/19 (52%) Query: 13 LVIVGDGACGKTCLLIVFS 31 LV VG+ GKT + + Sbjct: 57 LVFVGETGSGKTTQIPQYV 75 >2P65-A nrPDB Length = 187 Score = 27.9 bits (61), Expect = 3.6, Method: Composition-based stats. Identities = 5/14 (35%), Positives = 10/14 (71%) Query: 14 VIVGDGACGKTCLL 27 +++GD GKT ++ Sbjct: 47 ILLGDPGVGKTAIV 60 >6OIJ-A nrPDB Length = 353 Score = 27.9 bits (61), Expect = 3.6, Method: Composition-based stats. Identities = 31/179 (17%), Positives = 50/179 (27%), Gaps = 32/179 (17%) Query: 39 YVPTVFENYVADVEVDG--------RRVELALWDTAGQ--EDYDRLRPLSYPDSNVVLIC 88 Y+PT + V G + + D GQ E + S + L+ Sbjct: 166 YLPTQQDVLRVRVPTTGIIEYPFDLENIIFRMVDVGGQRSERRKWIHCFENVTSIMFLVA 225 Query: 89 FSIDLPDSLENVQEKWIAE-------VLHFC--QGVPIILVGCKVDLRNDPQTIEQLRQE 139 S +E+ E + E ++ + Q +IL K DL D L Sbjct: 226 LSEYDQVLVESDNENRMEESKALFRTIITYPWFQNSSVILFLNKKDLLEDKILYSHLVDY 285 Query: 140 GQQPVTSQEGQSVADQIGATGYYE-------------CSAKTGYGVREVFEAATRASLM 185 + Q A + + + A +R VF A L Sbjct: 286 FPEFDGPQRDAQAAREFILKMFVDLNPDSDKIIYSHFTCATDTENIRFVFAAVKDTILQ 344 >4O0M-A nrPDB Length = 524 Score = 27.5 bits (60), Expect = 3.8, Method: Composition-based stats. Identities = 7/37 (18%), Positives = 12/37 (32%) Query: 14 VIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVAD 50 ++ G GKT + F P +F + Sbjct: 44 LVSGTSGTGKTLFAVQFLYNGITIFNEPGIFVTFEES 80 >1LZ5-A nrPDB Length = 134 Score = 27.5 bits (60), Expect = 3.9, Method: Composition-based stats. Identities = 7/45 (15%), Positives = 14/45 (31%) Query: 158 ATGYYECSAKTGYGVREVFEAATRASLMGKSKTNGKAKKNTTEKK 202 + CSA + + A R + A +N + + Sbjct: 79 NACHLSCSALLQDNIADAVACAKRVVRDPQGIRAWVAWRNRCQNR 123 >3DEF-A nrPDB Length = 262 Score = 27.5 bits (60), Expect = 3.9, Method: Composition-based stats. Identities = 5/22 (22%), Positives = 11/22 (50%) Query: 13 LVIVGDGACGKTCLLIVFSKGQ 34 ++++G G GK+ + Q Sbjct: 39 VLVLGKGGVGKSSTVNSLIGEQ 60 >6D9H-A nrPDB Length = 355 Score = 27.5 bits (60), Expect = 4.1, Method: Composition-based stats. Identities = 31/183 (16%), Positives = 52/183 (28%), Gaps = 34/183 (18%) Query: 37 EVYVPTVFENYVADVEVDG--------RRVELALWDTAGQEDYDRLRPLSYPDSNVVLIC 88 Y+PT + V+ G + + ++D Q + + ++ C Sbjct: 166 SDYIPTQQDVLRTRVKTTGIVETHFTFKDLHFKMFDVGAQRSERKKWIHCFEGVTAIIFC 225 Query: 89 -----FSIDLPDSLE-NVQEKWIAEVLHFCQG-----VPIILVGCKVDLRNDPQTIEQLR 137 + + L + E N + C IIL K DL + T L Sbjct: 226 VALSAYDLVLAEDEEMNRMHASMKLFDSICNNKWFTDTSIILFLNKKDLFEEKITHSPLT 285 Query: 138 ---QEGQQPVTSQEGQSVADQIG-----------ATGYYECSAKTGYGVREVFEAATRAS 183 E E S ++ CS T V+ VF+A T Sbjct: 286 ICFPEYTGANKYDEAASYIQSKFEDLNKRKDTKEIYTHFTCSTDTK-NVQFVFDAVTDVI 344 Query: 184 LMG 186 + Sbjct: 345 IKN 347 >3P1J-A nrPDB Length = 209 Score = 27.5 bits (60), Expect = 4.1, Method: Composition-based stats. Identities = 5/20 (25%), Positives = 11/20 (55%) Query: 6 GNSIRRKLVIVGDGACGKTC 25 G+ ++++VG GK+ Sbjct: 1 GSRSELRIILVGKTGTGKSA 20 >4Q7K-A nrPDB Length = 250 Score = 27.5 bits (60), Expect = 4.3, Method: Composition-based stats. Identities = 4/16 (25%), Positives = 10/16 (62%) Query: 13 LVIVGDGACGKTCLLI 28 + ++G+ GK+ L+ Sbjct: 34 VAVLGETGSGKSTLMN 49 >5I8Q-A nrPDB Length = 767 Score = 27.5 bits (60), Expect = 4.4, Method: Composition-based stats. Identities = 7/19 (36%), Positives = 10/19 (52%) Query: 13 LVIVGDGACGKTCLLIVFS 31 +V VG+ GKT + F Sbjct: 112 MVFVGETGSGKTTQIPQFV 130 >4QIW-C nrPDB Length = 391 Score = 27.5 bits (60), Expect = 4.4, Method: Composition-based stats. Identities = 12/54 (22%), Positives = 20/54 (37%), Gaps = 9/54 (16%) Query: 17 GDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDG----RRVELALWDTA 66 G GKT + + E + T N+ ++V G R +W+ A Sbjct: 225 GLSGVGKT-----IIRKEGDEYVIYTEGSNFKQVLKVPGVDPTRTRTNNIWEIA 273 >5JWO-A nrPDB Length = 247 Score = 27.5 bits (60), Expect = 4.6, Method: Composition-based stats. Identities = 7/37 (18%), Positives = 12/37 (32%) Query: 14 VIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVAD 50 ++ G GKT + F P +F + Sbjct: 36 LVSGTSGTGKTLFAVQFLYNGITIFNEPGIFVTFEES 72 >4XRP-A nrPDB Length = 312 Score = 27.5 bits (60), Expect = 4.6, Method: Composition-based stats. Identities = 9/38 (23%), Positives = 15/38 (39%), Gaps = 1/38 (2%) Query: 1 MSQQVGNSIRRKL-VIVGDGACGKTCLLIVFSKGQFPE 37 MS + KL ++VG GK+ F + + Sbjct: 1 MSAKNNTHHFPKLLILVGAPGSGKSTFARYFIRTEDNW 38 >5ZLU-EE nrPDB Length = 497 Score = 27.5 bits (60), Expect = 4.7, Method: Composition-based stats. Identities = 8/23 (34%), Positives = 12/23 (52%) Query: 8 SIRRKLVIVGDGACGKTCLLIVF 30 ++ +VGD GK+ LL V Sbjct: 28 HSYDRIGLVGDNGAGKSSLLKVL 50 >6FT6-s nrPDB Length = 520 Score = 27.2 bits (59), Expect = 4.8, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 3/56 (5%) Query: 71 YDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVPIILVGCKVDL 126 YD++ S+V+L P+S + + + E + QG +IL+ KVDL Sbjct: 165 YDKIFKSVIDASDVILYVLDARDPES---TRSRKVEEAVLQSQGKRLILILNKVDL 217 >1P9P-A nrPDB Length = 261 Score = 27.2 bits (59), Expect = 4.8, Method: Composition-based stats. Identities = 13/72 (18%), Positives = 27/72 (37%), Gaps = 11/72 (15%) Query: 94 PDSLE----NVQEKWIAEVLHFCQGVPIILVGCKVDLRNDPQTIEQLRQEGQQP------ 143 DS + EVL + P++L G ++R R ++P Sbjct: 174 EDSFAEGLLDCPHYTRPEVLEGMEVPPVLLSGNHAEIRRWRLKQSLGRTWLRRPELLENL 233 Query: 144 -VTSQEGQSVAD 154 +T ++ + +A+ Sbjct: 234 ALTEEQARLLAE 245 >3Q06-A nrPDB Length = 231 Score = 27.2 bits (59), Expect = 4.8, Method: Composition-based stats. Identities = 9/35 (25%), Positives = 15/35 (42%), Gaps = 3/35 (8%) Query: 42 TVFENYVADVEVDGRRVELALWDTAGQEDYDRLRP 76 T EN +DG L + G+E +++ R Sbjct: 189 TEEENLRKKKTMDGEYFTLQI---RGRERFEQFRE 220 >5JZV-A nrPDB Length = 206 Score = 27.2 bits (59), Expect = 5.0, Method: Composition-based stats. Identities = 6/21 (28%), Positives = 11/21 (52%) Query: 6 GNSIRRKLVIVGDGACGKTCL 26 G+ + +++ G GKT L Sbjct: 33 GSMLLPNILLTGTPGVGKTTL 53 >5EE0-A nrPDB Length = 395 Score = 27.2 bits (59), Expect = 5.1, Method: Composition-based stats. Identities = 20/80 (25%), Positives = 27/80 (33%), Gaps = 18/80 (22%) Query: 8 SIRRKLVIVGDGACGKTCLLIVFSKGQFPEVYVP--TVFENYVADVEVDGRRVE------ 59 S K+ IVG GK+ + +K P P T+ N A V V R + Sbjct: 23 SSHLKIGIVGLPNVGKSTFFNIVTKLSIPAENFPFCTIDPN-EARVYVPDERFDWLCQLY 81 Query: 60 ---------LALWDTAGQED 70 L + D AG Sbjct: 82 KPKSEVSAYLEINDIAGLVR 101 >5EUM-A nrPDB Length = 258 Score = 27.2 bits (59), Expect = 5.2, Method: Composition-based stats. Identities = 6/21 (28%), Positives = 10/21 (47%), Gaps = 3/21 (14%) Query: 13 LVIVGDGACGKTC---LLIVF 30 + +VG GK+ L+ F Sbjct: 48 VALVGRSGSGKSTIANLVTRF 68 >1T9H-A nrPDB Length = 307 Score = 27.2 bits (59), Expect = 5.5, Method: Composition-based stats. Identities = 6/15 (40%), Positives = 7/15 (46%) Query: 14 VIVGDGACGKTCLLI 28 V G GK+ LL Sbjct: 177 VFAGQSGVGKSSLLN 191 >2P5T-B nrPDB Length = 253 Score = 27.2 bits (59), Expect = 5.6, Method: Composition-based stats. Identities = 21/158 (13%), Positives = 50/158 (31%), Gaps = 26/158 (16%) Query: 13 LVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDTAGQEDYD 72 +++ G GKT + + +F V +++ + L L Q++Y Sbjct: 35 ILLGGQSGAGKTT-IHRIKQKEFQGNIVIIDGDSFRSQ-----HPHYLEL-----QQEYG 83 Query: 73 RLRPLSYPDSNVVLICFSIDLPDSL------------ENVQEKWIAEVLHFCQGVPIILV 120 + D ++ + SL +V +K + + V + L+ Sbjct: 84 KDSVEYTKDFAGKMVESLVTKLSSLGYNLLIEGTLRTVDVPKKTAQLLKNKGYEVQLALI 143 Query: 121 GCKVDLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGA 158 K +L +R E + + ++ + Sbjct: 144 ATKPELS---YLSTLIRYEELYIINPNQARATPKEHHD 178 >6EM8-A nrPDB Length = 818 Score = 27.2 bits (59), Expect = 5.7, Method: Composition-based stats. Identities = 5/14 (35%), Positives = 9/14 (64%) Query: 14 VIVGDGACGKTCLL 27 V++G+ GKT + Sbjct: 205 VLIGEPGVGKTAIA 218 >6EMW-E nrPDB Length = 181 Score = 27.2 bits (59), Expect = 5.8, Method: Composition-based stats. Identities = 5/14 (35%), Positives = 9/14 (64%) Query: 14 VIVGDGACGKTCLL 27 V++G+ GKT + Sbjct: 44 VLIGEPGVGKTAIA 57 >4F4J-A nrPDB Length = 202 Score = 27.2 bits (59), Expect = 6.0, Method: Composition-based stats. Identities = 15/70 (21%), Positives = 28/70 (40%), Gaps = 8/70 (11%) Query: 7 NSIRRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADV--EVDGRRVELALWD 64 S+ R +VI G GK+ LL ++P+ + +V EV+G+ D Sbjct: 14 GSMSRPIVISGPSGTGKSTLLKKLFA-EYPDSFGFSVPSTTRTPRAGEVNGKDYNFVSVD 72 Query: 65 TAGQEDYDRL 74 ++ + Sbjct: 73 -----EFKSM 77 >1EZ4-A nrPDB Length = 318 Score = 27.2 bits (59), Expect = 6.0, Method: Composition-based stats. Identities = 8/14 (57%), Positives = 12/14 (85%) Query: 11 RKLVIVGDGACGKT 24 +K+V+VGDGA G + Sbjct: 6 QKVVLVGDGAVGSS 19 >4YDS-A nrPDB Length = 228 Score = 27.2 bits (59), Expect = 6.1, Method: Composition-based stats. Identities = 14/61 (22%), Positives = 24/61 (39%), Gaps = 4/61 (6%) Query: 5 VGNSIRRKLVIVGDGACGKTCLLIVFSKG---QFPEVYVPTVFENYVADVEVDGRRVELA 61 G ++I GD GK+ L F G + YV T + D + + +++ Sbjct: 15 GGIPYPASIMIEGDHGTGKSVLSAQFVLGFLLSDKKGYVITTEQT-TKDYLIKMKEIKID 73 Query: 62 L 62 L Sbjct: 74 L 74 >4BQQ-A nrPDB Length = 396 Score = 26.8 bits (58), Expect = 6.6, Method: Composition-based stats. Identities = 4/29 (13%), Positives = 13/29 (44%) Query: 65 TAGQEDYDRLRPLSYPDSNVVLICFSIDL 93 TA + +++R+ ++I + + Sbjct: 90 TAERPEFERILNECRAGRLNMIIVYDVSR 118 >3EPJ-A nrPDB Length = 409 Score = 26.8 bits (58), Expect = 7.1, Method: Composition-based stats. Identities = 7/21 (33%), Positives = 11/21 (52%) Query: 13 LVIVGDGACGKTCLLIVFSKG 33 +VI G GK+ L I ++ Sbjct: 5 IVIAGTTGVGKSQLSIQLAQK 25 >2XTP-A nrPDB Length = 260 Score = 26.8 bits (58), Expect = 7.3, Method: Composition-based stats. Identities = 5/22 (22%), Positives = 11/22 (50%) Query: 4 QVGNSIRRKLVIVGDGACGKTC 25 Q + ++++VG GK+ Sbjct: 16 QCASRSELRIILVGKTGTGKSA 37 >2ODE-A nrPDB Length = 350 Score = 26.8 bits (58), Expect = 7.5, Method: Composition-based stats. Identities = 6/20 (30%), Positives = 12/20 (60%) Query: 10 RRKLVIVGDGACGKTCLLIV 29 KL+++G G GK+ ++ Sbjct: 32 EVKLLLLGAGESGKSTIVKQ 51 >3KAO-A nrPDB Length = 329 Score = 26.8 bits (58), Expect = 7.9, Method: Composition-based stats. Identities = 6/41 (14%), Positives = 19/41 (46%), Gaps = 2/41 (4%) Query: 81 DSNVVLICFSIDLPDSLENVQEKWIAEVLHFC--QGVPIIL 119 ++ L+ + +D + + ++ +I + C + +P L Sbjct: 125 NAVKFLLYYDVDDAEEINIQKKAYIERIGSECVAEDIPFFL 165 >2YK0-A nrPDB Length = 790 Score = 26.4 bits (57), Expect = 9.3, Method: Composition-based stats. Identities = 8/50 (16%), Positives = 15/50 (30%), Gaps = 13/50 (26%) Query: 88 CFSIDLPDSLENVQEKWIAEVLH-------------FCQGVPIILVGCKV 124 ID + + + E+W+ + L + I L K Sbjct: 566 VIDIDKHITFKVLLERWLKDFLEGYKKSKRKINPCTKDKNSCIKLCINKC 615 >2E21-A nrPDB Length = 317 Score = 26.4 bits (57), Expect = 9.9, Method: Composition-based stats. Identities = 7/39 (17%), Positives = 14/39 (35%) Query: 169 GYGVREVFEAATRASLMGKSKTNGKAKKNTTEKKKKKCV 207 + + F + + +A+K E KK C+ Sbjct: 216 NENLEDTFLKMVKVLRAEREFLEEEAQKLYKEVKKGNCL 254 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.312 0.151 0.452 Lambda K H 0.267 0.0465 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 8,889,356 Number of Sequences: 36641 Number of extensions: 378567 Number of successful extensions: 2642 Number of sequences better than 10.0: 403 Number of HSP's better than 10.0 without gapping: 429 Number of HSP's successfully gapped in prelim test: 135 Number of HSP's that attempted gapping in prelim test: 1596 Number of HSP's gapped (non-prelim): 618 length of query: 209 length of database: 10,336,785 effective HSP length: 93 effective length of query: 116 effective length of database: 6,929,172 effective search space: 803783952 effective search space used: 803783952 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.2 bits) S2: 57 (26.4 bits)