BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= P06730 (217 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 4DUM-A nrPDB 456 e-129 5GW6-A nrPDB 406 e-114 5ABX-A nrPDB 212 8e-56 4AXG-A nrPDB 210 4e-55 3M94-A nrPDB 207 2e-54 4UEC-A nrPDB 204 2e-53 6FBZ-A nrPDB 148 1e-36 2IDR-A nrPDB 143 5e-35 2WMC-A nrPDB 134 3e-32 5ME5-A nrPDB 134 4e-32 5ME6-A nrPDB 133 5e-32 2JGB-A nrPDB 128 2e-30 6FC1-A nrPDB 125 1e-29 3HXI-A nrPDB 125 1e-29 4B6U-A nrPDB 81 4e-16 5WB5-A nrPDB 79 1e-15 6O80-A nrPDB 31 0.44 5CIO-A nrPDB 30 0.53 4L8J-A nrPDB 28 3.4 2A1T-A nrPDB 28 4.1 5XYI-Q nrPDB 27 6.0 4D3C-L nrPDB 27 9.9 >4DUM-A nrPDB Length = 240 Score = 456 bits (1172), Expect = e-129, Method: Compositional matrix adjust. Identities = 217/217 (100%), Positives = 217/217 (100%) Query: 1 MATVEPETTPTPNPPTTEEEKTESNQEVANPEHYIKHPLQNRWALWFFKNDKSKTWQANL 60 MATVEPETTPTPNPPTTEEEKTESNQEVANPEHYIKHPLQNRWALWFFKNDKSKTWQANL Sbjct: 24 MATVEPETTPTPNPPTTEEEKTESNQEVANPEHYIKHPLQNRWALWFFKNDKSKTWQANL 83 Query: 61 RLISKFDTVEDFWALYNHIQLSSNLMPGCDYSLFKDGIEPMWEDEKNKRGGRWLITLNKQ 120 RLISKFDTVEDFWALYNHIQLSSNLMPGCDYSLFKDGIEPMWEDEKNKRGGRWLITLNKQ Sbjct: 84 RLISKFDTVEDFWALYNHIQLSSNLMPGCDYSLFKDGIEPMWEDEKNKRGGRWLITLNKQ 143 Query: 121 QRRSDLDRFWLETLLCLIGESFDDYSDDVCGAVVNVRAKGDKIAIWTTECENREAVTHIG 180 QRRSDLDRFWLETLLCLIGESFDDYSDDVCGAVVNVRAKGDKIAIWTTECENREAVTHIG Sbjct: 144 QRRSDLDRFWLETLLCLIGESFDDYSDDVCGAVVNVRAKGDKIAIWTTECENREAVTHIG 203 Query: 181 RVYKERLGLPPKIVIGYQSHADTATKSGSTTKNRFVV 217 RVYKERLGLPPKIVIGYQSHADTATKSGSTTKNRFVV Sbjct: 204 RVYKERLGLPPKIVIGYQSHADTATKSGSTTKNRFVV 240 >5GW6-A nrPDB Length = 196 Score = 406 bits (1043), Expect = e-114, Method: Compositional matrix adjust. Identities = 192/195 (98%), Positives = 192/195 (98%) Query: 23 ESNQEVANPEHYIKHPLQNRWALWFFKNDKSKTWQANLRLISKFDTVEDFWALYNHIQLS 82 ESNQEVANPEHYIKHPLQNRWALWFFKNDKSKTWQANLRLISKFDTVEDFWALYNHIQLS Sbjct: 2 ESNQEVANPEHYIKHPLQNRWALWFFKNDKSKTWQANLRLISKFDTVEDFWALYNHIQLS 61 Query: 83 SNLMPGCDYSLFKDGIEPMWEDEKNKRGGRWLITLNKQQRRSDLDRFWLETLLCLIGESF 142 SNLMPGCDYSLFKDGIEPMWED N RGGRWLITLNKQQRRSDLDRFWLETLLCLIGESF Sbjct: 62 SNLMPGCDYSLFKDGIEPMWEDAANARGGRWLITLNKQQRRSDLDRFWLETLLCLIGESF 121 Query: 143 DDYSDDVCGAVVNVRAKGDKIAIWTTECENREAVTHIGRVYKERLGLPPKIVIGYQSHAD 202 DDYSDDVCGAVVNVRAKGDKIAIWTTECENREAVTHIGRVYKERLGLPPKIVIGYQSHAD Sbjct: 122 DDYSDDVCGAVVNVRAKGDKIAIWTTECENREAVTHIGRVYKERLGLPPKIVIGYQSHAD 181 Query: 203 TATKSGSTTKNRFVV 217 TATKSGSTTKNRFVV Sbjct: 182 TATKSGSTTKNRFVV 196 >5ABX-A nrPDB Length = 190 Score = 212 bits (540), Expect = 8e-56, Method: Compositional matrix adjust. Identities = 95/188 (50%), Positives = 135/188 (71%), Gaps = 3/188 (1%) Query: 33 HYIKHPLQNRWALWFFKNDKSKTWQANLRLISKFDTVEDFWALYNHIQLSSNLMPGCDYS 92 H +HPLQNRWALW+ K D++K W+ L+++S FDTVEDFW+LYNHIQ + L G DY Sbjct: 3 HMTRHPLQNRWALWYLKADRNKEWEDCLKMVSLFDTVEDFWSLYNHIQSAGGLNWGSDYY 62 Query: 93 LFKDGIEPMWEDEKNKRGGRWLITLNKQ--QRRSD-LDRFWLETLLCLIGESFDDYSDDV 149 LFK+GI+PMWED N +GGRWL+ ++KQ QRR+ LD +WLE L+ ++GE FD+Y D + Sbjct: 63 LFKEGIKPMWEDVNNVQGGRWLVVVDKQKLQRRTQLLDHYWLELLMAIVGEQFDEYGDYI 122 Query: 150 CGAVVNVRAKGDKIAIWTTECENREAVTHIGRVYKERLGLPPKIVIGYQSHADTATKSGS 209 CGAVVNVR KGDK+++WT + + IG+V K++L +P ++ Y+ H D++ ++ S Sbjct: 123 CGAVVNVRQKGDKVSLWTRDATRDDVNLRIGQVLKQKLSIPDTEILRYEVHKDSSARTSS 182 Query: 210 TTKNRFVV 217 T K R + Sbjct: 183 TVKPRICL 190 >4AXG-A nrPDB Length = 248 Score = 210 bits (534), Expect = 4e-55, Method: Compositional matrix adjust. Identities = 98/186 (52%), Positives = 126/186 (67%), Gaps = 2/186 (1%) Query: 32 EHYIKHPLQNRWALWFFKNDKSKTWQANLRLISKFDTVEDFWALYNHIQLSSNLMPGCDY 91 EH KHPL N W LW+ +ND+SK+W+ I+ FDTVEDFW+LYNHI+ S + G DY Sbjct: 65 EHLYKHPLMNVWTLWYLENDRSKSWEDMQNEITSFDTVEDFWSLYNHIKPPSEIKLGSDY 124 Query: 92 SLFKDGIEPMWEDEKNKRGGRWLITLNKQQRRSDLDRFWLETLLCLIGESFDDYSDDVCG 151 SLFK I PMWED NK+GGRW+ITLNK ++DLD WL+ LLCLIGE+F D+SD +CG Sbjct: 125 SLFKKNIRPMWEDAANKQGGRWVITLNKSS-KTDLDNLWLDVLLCLIGEAF-DHSDQICG 182 Query: 152 AVVNVRAKGDKIAIWTTECENREAVTHIGRVYKERLGLPPKIVIGYQSHADTATKSGSTT 211 AV+N+R K +KI+IWT + N EA IG ++ L L + YQ H DT K GS Sbjct: 183 AVINIRGKSNKISIWTADGNNEEAALEIGHKLRDALRLGRNNSLQYQLHKDTMVKQGSNV 242 Query: 212 KNRFVV 217 K+ + + Sbjct: 243 KSIYTL 248 >3M94-A nrPDB Length = 189 Score = 207 bits (528), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 92/183 (50%), Positives = 130/183 (71%) Query: 35 IKHPLQNRWALWFFKNDKSKTWQANLRLISKFDTVEDFWALYNHIQLSSNLMPGCDYSLF 94 ++HPLQ WALW+ K D+SK W+ L+ ++ FDTVEDFW+LYNHIQ +S L G DY LF Sbjct: 1 MRHPLQCHWALWYLKADRSKDWEDCLKQVAVFDTVEDFWSLYNHIQAASGLTWGSDYYLF 60 Query: 95 KDGIEPMWEDEKNKRGGRWLITLNKQQRRSDLDRFWLETLLCLIGESFDDYSDDVCGAVV 154 K+GI+PMWEDE N +GGRWL+ ++KQ+R LD +WLE L+ +IGE F+D + +CGAVV Sbjct: 61 KEGIKPMWEDENNVKGGRWLVVVDKQKRAQLLDHYWLELLMAIIGEQFEDNGEYICGAVV 120 Query: 155 NVRAKGDKIAIWTTECENREAVTHIGRVYKERLGLPPKIVIGYQSHADTATKSGSTTKNR 214 NVR KGDK+++WT + + IG++ K +L +P I Y+ H D++ ++GS K R Sbjct: 121 NVRQKGDKVSLWTRDSLKDDVNLRIGQILKAKLEIPDTEPIRYEVHKDSSVRTGSMVKPR 180 Query: 215 FVV 217 V+ Sbjct: 181 IVI 183 >4UEC-A nrPDB Length = 184 Score = 204 bits (519), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 96/184 (52%), Positives = 126/184 (68%), Gaps = 2/184 (1%) Query: 34 YIKHPLQNRWALWFFKNDKSKTWQANLRLISKFDTVEDFWALYNHIQLSSNLMPGCDYSL 93 ++KHPL N W LW+ +ND+SK+W+ I+ FDTVEDFW+LYNHI+ S + G DYSL Sbjct: 3 HMKHPLMNVWTLWYLENDRSKSWEDMQNEITSFDTVEDFWSLYNHIKPPSEIKLGSDYSL 62 Query: 94 FKDGIEPMWEDEKNKRGGRWLITLNKQQRRSDLDRFWLETLLCLIGESFDDYSDDVCGAV 153 FK I PMWED NK+GGRW+ITLNK ++DLD WL+ LLCLIGE+F D+SD +CGAV Sbjct: 63 FKKNIRPMWEDAANKQGGRWVITLNKSS-KTDLDNLWLDVLLCLIGEAF-DHSDQICGAV 120 Query: 154 VNVRAKGDKIAIWTTECENREAVTHIGRVYKERLGLPPKIVIGYQSHADTATKSGSTTKN 213 +N+R K +KI+IWT + N EA IG ++ L L + YQ H DT K GS K+ Sbjct: 121 INIRGKSNKISIWTADGNNEEAALEIGHKLRDALRLGRNNSLQYQLHKDTMVKQGSNVKS 180 Query: 214 RFVV 217 + + Sbjct: 181 IYTL 184 >6FBZ-A nrPDB Length = 200 Score = 148 bits (374), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 77/187 (41%), Positives = 108/187 (57%), Gaps = 5/187 (2%) Query: 35 IKHPLQNRWALWFFK--NDKSKTWQANLRLISKFDTVEDFWALYNHIQLSSNLMPGCDYS 92 +KHPL RW LWF K + K W L+ + F++VE+FW +YN+I S L DY Sbjct: 15 VKHPLSCRWTLWFTKPASGKGDNWNDLLKKVITFESVEEFWGIYNNIAPVSELAVKSDYH 74 Query: 93 LFKDGIEPMWEDEKNKRGGRWLITLNKQQRRSDLDRFWLETLLCLIGESFDDYSD-DVCG 151 LFK+G+ P WED +NK GG+W K +R ++D WL T+L IGE+ +D D +V G Sbjct: 75 LFKEGVRPEWEDPQNKHGGKWAYQF-KDKRSVNIDELWLHTMLAAIGETLEDEEDGEVMG 133 Query: 152 AVVNVRAKGDKIAIWTTECE-NREAVTHIGRVYKERLGLPPKIVIGYQSHADTATKSGST 210 VVNVR +I +WT E ++E + +IGR KE L LPP ++ + H + A + Sbjct: 134 VVVNVRKGFYRIGVWTRTTEKSKEILMNIGRRLKEVLKLPPNEMVEFSGHTEAAQAGSTR 193 Query: 211 TKNRFVV 217 K R VV Sbjct: 194 AKARMVV 200 >2IDR-A nrPDB Length = 177 Score = 143 bits (361), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 82/185 (44%), Positives = 105/185 (56%), Gaps = 13/185 (7%) Query: 37 HPLQNRWALWFFKNDKSKT----WQANLRLISKFDTVEDFWALYNHIQLSSNLMPGCDYS 92 HPL+N W WF N + K+ W + + I F TVEDFW LYN+I S L G D+ Sbjct: 2 HPLENAWTFWF-DNPQGKSRQVAWGSTIHPIHTFSTVEDFWGLYNNIHNPSKLNVGADFH 60 Query: 93 LFKDGIEPMWEDEKNKRGGRWLITLNKQQRRSDLDRFWLETLLCLIGESFDDYSDDVCGA 152 FK+ IEP WED GG+W I+ R D FWL TLL +IGE F D+ D++CGA Sbjct: 61 CFKNKIEPKWEDPICANGGKWTISCG----RGKSDTFWLHTLLAMIGEQF-DFGDEICGA 115 Query: 153 VVNVRAKGDKIAIWTTECENREAVTHIGRVYKERLGLPPKIVIGYQSHADTATKSGSTTK 212 VV+VR K +++AIWT N A IG+ +KE L K IG+ H D A +S K Sbjct: 116 VVSVRQKQERVAIWTKNAANEAAQISIGKQWKEFLDY--KDSIGFIVHED-AKRSDKGPK 172 Query: 213 NRFVV 217 NR+ V Sbjct: 173 NRYTV 177 >2WMC-A nrPDB Length = 178 Score = 134 bits (337), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 77/186 (41%), Positives = 103/186 (55%), Gaps = 11/186 (5%) Query: 35 IKHPLQNRWALWF---FKNDKSKTWQANLRLISKFDTVEDFWALYNHIQLSSNLMPGCDY 91 + H L+N W WF K W +++R I F TVE+FW++YN+I L G D+ Sbjct: 1 MPHLLENSWTFWFDTPAAKSKQAAWGSSMRPIYTFSTVEEFWSIYNNIHHPGKLAVGADF 60 Query: 92 SLFKDGIEPMWEDEKNKRGGRWLITLNKQQRRSDLDRFWLETLLCLIGESFDDYSDDVCG 151 FK IEP WED GG+W T N + +SD WL TLL +IGE F D+ D++CG Sbjct: 61 YCFKHKIEPKWEDPICANGGKW--TANYPKGKSDTS--WLYTLLAMIGEQF-DHGDEICG 115 Query: 152 AVVNVRAKGDKIAIWTTECENREAVTHIGRVYKERLGLPPKIVIGYQSHADTATKSGSTT 211 AVVNVR + +KI+IWT N A IG+ +KE L +G+ H D A K Sbjct: 116 AVVNVRGRAEKISIWTKNASNEAAQVSIGKQWKEFLDYNE--TMGFIFH-DDARKLDRNA 172 Query: 212 KNRFVV 217 KN++VV Sbjct: 173 KNKYVV 178 >5ME5-A nrPDB Length = 237 Score = 134 bits (336), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 78/184 (42%), Positives = 99/184 (53%), Gaps = 11/184 (5%) Query: 37 HPLQNRWALWF---FKNDKSKTWQANLRLISKFDTVEDFWALYNHIQLSSNLMPGCDYSL 93 HPL++ W WF K TW A++R I F TVE+FW++YN+I S L D Sbjct: 62 HPLEHSWTFWFDNPSAKSKQATWGASIRPIYTFSTVEEFWSVYNNIHHPSKLAMRADLYC 121 Query: 94 FKDGIEPMWEDEKNKRGGRWLITLNKQQRRSDLDRFWLETLLCLIGESFDDYSDDVCGAV 153 FK IEP WED GG+W + R D WL TLL +IGE F D D++CGAV Sbjct: 122 FKHKIEPKWEDPVCANGGKWTVNF----PRGKSDNGWLYTLLAMIGEQF-DCGDEICGAV 176 Query: 154 VNVRAKGDKIAIWTTECENREAVTHIGRVYKERLGLPPKIVIGYQSHADTATKSGSTTKN 213 VNVR+ DKI+IWT N A IG+ +KE L IG+ H D A K KN Sbjct: 177 VNVRSGQDKISIWTKNASNEAAQASIGKQWKEFLDYNES--IGFIFH-DDAKKFDRHAKN 233 Query: 214 RFVV 217 +++V Sbjct: 234 KYMV 237 >5ME6-A nrPDB Length = 186 Score = 133 bits (335), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 78/184 (42%), Positives = 99/184 (53%), Gaps = 11/184 (5%) Query: 37 HPLQNRWALWF---FKNDKSKTWQANLRLISKFDTVEDFWALYNHIQLSSNLMPGCDYSL 93 HPL++ W WF K TW A++R I F TVE+FW++YN+I S L D Sbjct: 11 HPLEHSWTFWFDNPSAKSKQATWGASIRPIYTFSTVEEFWSVYNNIHHPSKLAMRADLYC 70 Query: 94 FKDGIEPMWEDEKNKRGGRWLITLNKQQRRSDLDRFWLETLLCLIGESFDDYSDDVCGAV 153 FK IEP WED GG+W + R D WL TLL +IGE F D D++CGAV Sbjct: 71 FKHKIEPKWEDPVCANGGKWTVNF----PRGKSDNGWLYTLLAMIGEQF-DCGDEICGAV 125 Query: 154 VNVRAKGDKIAIWTTECENREAVTHIGRVYKERLGLPPKIVIGYQSHADTATKSGSTTKN 213 VNVR+ DKI+IWT N A IG+ +KE L IG+ H D A K KN Sbjct: 126 VNVRSGQDKISIWTKNASNEAAQASIGKQWKEFLDYNES--IGFIFH-DDAKKFDRHAKN 182 Query: 214 RFVV 217 +++V Sbjct: 183 KYMV 186 >2JGB-A nrPDB Length = 195 Score = 128 bits (321), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 62/186 (33%), Positives = 101/186 (54%), Gaps = 10/186 (5%) Query: 36 KHPLQNRWALWFFKND-----KSKTWQANLRLISKFDTVEDFWALYNHIQLSSNLMPGCD 90 +HPLQ + W+ + S++++ N++ I F +VE FW Y+H+ +L D Sbjct: 14 EHPLQYNYTFWYSRRTPGRPTSSQSYEQNIKQIGTFASVEQFWRFYSHMVRPGDLTGHSD 73 Query: 91 YSLFKDGIEPMWEDEKNKRGGRWLITLNKQQRRSDLDRFWLETLLCLIGESFDDYSDDVC 150 + LFK+GI+PMWED+ NK GG+W+I L R+ R W +L ++GE F +++C Sbjct: 74 FHLFKEGIKPMWEDDANKNGGKWIIRL----RKGLASRCWENLILAMLGEQF-MVGEEIC 128 Query: 151 GAVVNVRAKGDKIAIWTTECENREAVTHIGRVYKERLGLPPKIVIGYQSHADTATKSGST 210 GAVV+VR + D I+IW ++ I + L LPP ++ Y++H D+ G Sbjct: 129 GAVVSVRFQEDIISIWNKTASDQATTARIRDTLRRVLNLPPNTIMEYKTHTDSIKMPGRL 188 Query: 211 TKNRFV 216 R + Sbjct: 189 GPQRLL 194 >6FC1-A nrPDB Length = 193 Score = 125 bits (315), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 63/165 (38%), Positives = 99/165 (60%), Gaps = 6/165 (3%) Query: 28 VANPEHY-IKHPLQNRWALWFFKN--DKSKTWQANLRLISKFDTVEDFWALYNHIQLSSN 84 +++ H+ +KHPL W LW+ K DKS++W LR ++ F TVE+FWA+ +I Sbjct: 7 LSDSAHFDVKHPLNTAWTLWYTKPAVDKSESWSDLLRPVTSFQTVEEFWAIIQNIPEPHE 66 Query: 85 LMPGCDYSLFKDGIEPMWEDEKNKRGGRWLITLNKQQRRSDLDRFWLETLLCLIGESFDD 144 L DY +F++ + P WEDE N +GG+W L + +D+D WL TLL +IGE+ D+ Sbjct: 67 LPLKSDYHVFRNDVRPEWEDEANAKGGKWSFQL--RGAGADIDELWLRTLLAVIGETIDE 124 Query: 145 YSDDVCGAVVNVRAKGDKIAIWTTECENREAVTHIGRVYKERLGL 189 + G V+++R G+K A+WT E++E + IG +K+ L L Sbjct: 125 DDSQINGVVLSIRKGGNKFALWTA-SEDKEPLLRIGGKFKQVLAL 168 >3HXI-A nrPDB Length = 189 Score = 125 bits (314), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 67/192 (34%), Positives = 100/192 (52%), Gaps = 7/192 (3%) Query: 28 VANPEHYIKHPLQNRWALWFFKNDKSKTWQANLRLISKFDTVEDFWALYNHIQLSSNLMP 87 + +PE HPLQ+ W+ + F+ K+ W L ++ F T+EDFW++ H + Sbjct: 3 LGSPE--FPHPLQDSWSYYLFQFRKALDWDECLEKVATFSTIEDFWSVLTHTVRPREITY 60 Query: 88 GCDYSLFKDGIEPMWEDEKNKRGGRWLITLNKQQRRSDLDRFWLETLLCLIGESFDDYSD 147 G D +FK I P WED KN+ GGRWLI + +Q D+D W E L+ LIG +D + Sbjct: 61 GKDLYMFKSDIMPKWEDPKNENGGRWLINVTARQ---DVDFLWDELLMLLIGSDWDTDEE 117 Query: 148 D--VCGAVVNVRAKGDKIAIWTTECENREAVTHIGRVYKERLGLPPKIVIGYQSHADTAT 205 D +CGAV R++G K+++W T E + IGR KERL L I S + T Sbjct: 118 DRQICGAVFQPRSRGSKLSVWLTSDNEEETILSIGRRIKERLELEDTIYFQPVSDQRSQT 177 Query: 206 KSGSTTKNRFVV 217 + ++ + Sbjct: 178 RGSDICTGKYEI 189 >4B6U-A nrPDB Length = 207 Score = 80.9 bits (198), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 51/182 (28%), Positives = 85/182 (46%), Gaps = 11/182 (6%) Query: 38 PLQNRWALWFFKNDKSKT---WQANLRLISKFDTVEDFWALYNHIQLSSNLMPGCDYSLF 94 PL + W W ++ T +NL+ I TV+ FW++YN+I ++L C Y L Sbjct: 31 PLHSPWTFWLDRSLPGATAAECASNLKKIYTVQTVQIFWSVYNNIPPVTSLPLRCSYHLM 90 Query: 95 KDGIEPMWEDEKNKRGGRWLITLNKQQRRSDLDRFWLETLLCLIGESFDDYS---DDVCG 151 + P+WE+E N +GG W + + K + W E LL IGE F D + D++ G Sbjct: 91 RGERRPLWEEESNAKGGVWKMKVPKDSTST----VWKELLLATIGEQFTDCAAADDEIIG 146 Query: 152 AVVNVRAKGDKIAIWTTECENREAVTHIGRVYKERLGLPPKIVIGYQSHADTATKSGSTT 211 V+VR + D + +W T + ++++ + K V Y+ H + G Sbjct: 147 VSVSVRDREDVVQVWNVNASLVGEATVLEKIHQLLPHIAFKAVF-YKPHEEHHAFEGGRG 205 Query: 212 KN 213 K+ Sbjct: 206 KH 207 >5WB5-A nrPDB Length = 219 Score = 79.3 bits (194), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 48/207 (23%), Positives = 90/207 (43%), Gaps = 33/207 (15%) Query: 31 PEHYIK--HPLQNRWALWFFKNDKSKT--WQANLRLISKFDTVEDFWALYNHIQLSSNLM 86 P H + H LQ W LW+ T W+ +L I +VE+F+ + +++ L Sbjct: 13 PPHKMANLHKLQRAWTLWYDSPSTYNTENWEMSLVPIMTVHSVEEFFVMLRYMKPLHALR 72 Query: 87 PGCDYSLFKDGIEPMWEDEKNKRGGRWLITLN----------------------KQQRRS 124 Y F++G++PMWED NK+GG+ + L+ + ++ Sbjct: 73 TSSQYHFFQEGVKPMWEDPANKKGGKLWVNLDITSANGRSSNNNTSGTSAADGSAAEAKT 132 Query: 125 DLDRFWLETLLCLIGESFD--DYSDD-----VCGAVVNVRAKGDKIAIWTTECENREAVT 177 DLD+ W L+ +GE D D D V G V++ R +++A+W ++ + + Sbjct: 133 DLDKAWENVLMATVGEYLDCVDKKDTPTEPFVTGIVMSKRKYHNRLAVWVSDASATDKIE 192 Query: 178 HIGRVYKERLGLPPKIVIGYQSHADTA 204 + + + L P + + H + + Sbjct: 193 ALKKALTKEASLAPIASMVFTKHGEAS 219 >6O80-A nrPDB Length = 222 Score = 30.8 bits (68), Expect = 0.44, Method: Compositional matrix adjust. Identities = 33/130 (25%), Positives = 55/130 (42%), Gaps = 16/130 (12%) Query: 37 HPLQNRWALWF------------FKNDKSKTWQANLRLISKFDTVEDFWALYNHIQLSSN 84 H L++ W L + FK D +K QA + + TVE+FW+ N + Sbjct: 28 HALKDPWFLSYIPQLTPDTVKYDFKGDWNKAKQALQQPLDYIRTVEEFWSTINSLPKLHQ 87 Query: 85 LMPGCDYSLFKDGIEPMWEDEKNKRGGRWLITLNKQQRRSDLDRFWLETLLCLIGESFDD 144 L G + ++ ++ +E N G R L+ L K F L ++L G ++D Sbjct: 88 LGNGSTFIFARNNVDASYEAFPN--GTRVLVDLYKASVAEKGMDFVLSSVLGE-GLTYDV 144 Query: 145 YS-DDVCGAV 153 ++ VC V Sbjct: 145 FNGKKVCDVV 154 >5CIO-A nrPDB Length = 793 Score = 30.4 bits (67), Expect = 0.53, Method: Composition-based stats. Identities = 21/48 (43%), Positives = 25/48 (52%), Gaps = 11/48 (22%) Query: 3 TVEPETTPTPNPPTTEEEKTESNQEVANPEHYIKHPLQN-----RWAL 45 T EP+T P +PP T TES E A + Y PLQ+ RWAL Sbjct: 622 TAEPQTPPRLHPPVT---LTESGAEHALLQFY---PLQSDEAEGRWAL 663 >4L8J-A nrPDB Length = 328 Score = 28.1 bits (61), Expect = 3.4, Method: Compositional matrix adjust. Identities = 13/46 (28%), Positives = 25/46 (54%) Query: 78 HIQLSSNLMPGCDYSLFKDGIEPMWEDEKNKRGGRWLITLNKQQRR 123 +I+L+S++ P + L + ++ D +NK W++ NK RR Sbjct: 240 NIRLASDIAPFIEEKLMNVPLSAVFGDSENKNTYVWIVKDNKVNRR 285 >2A1T-A nrPDB Length = 421 Score = 27.7 bits (60), Expect = 4.1, Method: Compositional matrix adjust. Identities = 16/52 (30%), Positives = 22/52 (42%) Query: 114 LITLNKQQRRSDLDRFWLETLLCLIGESFDDYSDDVCGAVVNVRAKGDKIAI 165 +I N QQ++ L R E L+C + DV G KGD+ I Sbjct: 134 IIAGNDQQKKKYLGRMTEEPLMCAYCVTEPGAGSDVAGIKTKAEKKGDEYII 185 >5XYI-Q nrPDB Length = 140 Score = 26.9 bits (58), Expect = 6.0, Method: Compositional matrix adjust. Identities = 12/30 (40%), Positives = 17/30 (56%) Query: 178 HIGRVYKERLGLPPKIVIGYQSHADTATKS 207 H+ +VY R + IV YQ + D ATK+ Sbjct: 71 HVAQVYAIRQAVAKAIVAYYQKYVDEATKT 100 >4D3C-L nrPDB Length = 215 Score = 26.6 bits (57), Expect = 9.9, Method: Compositional matrix adjust. Identities = 14/54 (25%), Positives = 30/54 (55%), Gaps = 3/54 (5%) Query: 167 TTECENREAVTHIGRVYKERLGLPPKIVIGYQSHADTATKS---GSTTKNRFVV 217 T C+ ++V+++ Y+++ G PPK++I S+ ++ S GS + F + Sbjct: 20 TINCQASQSVSNLLAWYQQKPGQPPKLLIYGASNLESGVPSRFRGSGSGTEFTL 73 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 4DUM-A nrPDB 342 5e-95 5GW6-A nrPDB 303 3e-83 3M94-A nrPDB 270 5e-73 5ABX-A nrPDB 268 2e-72 4AXG-A nrPDB 251 2e-67 4UEC-A nrPDB 247 2e-66 5ME5-A nrPDB 242 8e-65 5ME6-A nrPDB 240 5e-64 2WMC-A nrPDB 234 2e-62 2IDR-A nrPDB 233 7e-62 2JGB-A nrPDB 229 5e-61 6FBZ-A nrPDB 229 7e-61 3HXI-A nrPDB 221 1e-58 6FC1-A nrPDB 209 8e-55 4B6U-A nrPDB 199 7e-52 5WB5-A nrPDB 187 3e-48 Sequences not found previously or not previously below threshold: 6O80-A nrPDB 54 4e-08 1RYX-A nrPDB 30 0.85 4JS2-A nrPDB 28 4.2 5GM5-A nrPDB 27 6.5 6HQG-A nrPDB 27 7.8 >4DUM-A nrPDB Length = 240 Score = 342 bits (878), Expect = 5e-95, Method: Composition-based stats. Identities = 217/217 (100%), Positives = 217/217 (100%) Query: 1 MATVEPETTPTPNPPTTEEEKTESNQEVANPEHYIKHPLQNRWALWFFKNDKSKTWQANL 60 MATVEPETTPTPNPPTTEEEKTESNQEVANPEHYIKHPLQNRWALWFFKNDKSKTWQANL Sbjct: 24 MATVEPETTPTPNPPTTEEEKTESNQEVANPEHYIKHPLQNRWALWFFKNDKSKTWQANL 83 Query: 61 RLISKFDTVEDFWALYNHIQLSSNLMPGCDYSLFKDGIEPMWEDEKNKRGGRWLITLNKQ 120 RLISKFDTVEDFWALYNHIQLSSNLMPGCDYSLFKDGIEPMWEDEKNKRGGRWLITLNKQ Sbjct: 84 RLISKFDTVEDFWALYNHIQLSSNLMPGCDYSLFKDGIEPMWEDEKNKRGGRWLITLNKQ 143 Query: 121 QRRSDLDRFWLETLLCLIGESFDDYSDDVCGAVVNVRAKGDKIAIWTTECENREAVTHIG 180 QRRSDLDRFWLETLLCLIGESFDDYSDDVCGAVVNVRAKGDKIAIWTTECENREAVTHIG Sbjct: 144 QRRSDLDRFWLETLLCLIGESFDDYSDDVCGAVVNVRAKGDKIAIWTTECENREAVTHIG 203 Query: 181 RVYKERLGLPPKIVIGYQSHADTATKSGSTTKNRFVV 217 RVYKERLGLPPKIVIGYQSHADTATKSGSTTKNRFVV Sbjct: 204 RVYKERLGLPPKIVIGYQSHADTATKSGSTTKNRFVV 240 >5GW6-A nrPDB Length = 196 Score = 303 bits (777), Expect = 3e-83, Method: Composition-based stats. Identities = 192/195 (98%), Positives = 192/195 (98%) Query: 23 ESNQEVANPEHYIKHPLQNRWALWFFKNDKSKTWQANLRLISKFDTVEDFWALYNHIQLS 82 ESNQEVANPEHYIKHPLQNRWALWFFKNDKSKTWQANLRLISKFDTVEDFWALYNHIQLS Sbjct: 2 ESNQEVANPEHYIKHPLQNRWALWFFKNDKSKTWQANLRLISKFDTVEDFWALYNHIQLS 61 Query: 83 SNLMPGCDYSLFKDGIEPMWEDEKNKRGGRWLITLNKQQRRSDLDRFWLETLLCLIGESF 142 SNLMPGCDYSLFKDGIEPMWED N RGGRWLITLNKQQRRSDLDRFWLETLLCLIGESF Sbjct: 62 SNLMPGCDYSLFKDGIEPMWEDAANARGGRWLITLNKQQRRSDLDRFWLETLLCLIGESF 121 Query: 143 DDYSDDVCGAVVNVRAKGDKIAIWTTECENREAVTHIGRVYKERLGLPPKIVIGYQSHAD 202 DDYSDDVCGAVVNVRAKGDKIAIWTTECENREAVTHIGRVYKERLGLPPKIVIGYQSHAD Sbjct: 122 DDYSDDVCGAVVNVRAKGDKIAIWTTECENREAVTHIGRVYKERLGLPPKIVIGYQSHAD 181 Query: 203 TATKSGSTTKNRFVV 217 TATKSGSTTKNRFVV Sbjct: 182 TATKSGSTTKNRFVV 196 >3M94-A nrPDB Length = 189 Score = 270 bits (689), Expect = 5e-73, Method: Composition-based stats. Identities = 92/183 (50%), Positives = 130/183 (71%) Query: 35 IKHPLQNRWALWFFKNDKSKTWQANLRLISKFDTVEDFWALYNHIQLSSNLMPGCDYSLF 94 ++HPLQ WALW+ K D+SK W+ L+ ++ FDTVEDFW+LYNHIQ +S L G DY LF Sbjct: 1 MRHPLQCHWALWYLKADRSKDWEDCLKQVAVFDTVEDFWSLYNHIQAASGLTWGSDYYLF 60 Query: 95 KDGIEPMWEDEKNKRGGRWLITLNKQQRRSDLDRFWLETLLCLIGESFDDYSDDVCGAVV 154 K+GI+PMWEDE N +GGRWL+ ++KQ+R LD +WLE L+ +IGE F+D + +CGAVV Sbjct: 61 KEGIKPMWEDENNVKGGRWLVVVDKQKRAQLLDHYWLELLMAIIGEQFEDNGEYICGAVV 120 Query: 155 NVRAKGDKIAIWTTECENREAVTHIGRVYKERLGLPPKIVIGYQSHADTATKSGSTTKNR 214 NVR KGDK+++WT + + IG++ K +L +P I Y+ H D++ ++GS K R Sbjct: 121 NVRQKGDKVSLWTRDSLKDDVNLRIGQILKAKLEIPDTEPIRYEVHKDSSVRTGSMVKPR 180 Query: 215 FVV 217 V+ Sbjct: 181 IVI 183 >5ABX-A nrPDB Length = 190 Score = 268 bits (684), Expect = 2e-72, Method: Composition-based stats. Identities = 93/189 (49%), Positives = 133/189 (70%), Gaps = 3/189 (1%) Query: 32 EHYIKHPLQNRWALWFFKNDKSKTWQANLRLISKFDTVEDFWALYNHIQLSSNLMPGCDY 91 H +HPLQNRWALW+ K D++K W+ L+++S FDTVEDFW+LYNHIQ + L G DY Sbjct: 2 PHMTRHPLQNRWALWYLKADRNKEWEDCLKMVSLFDTVEDFWSLYNHIQSAGGLNWGSDY 61 Query: 92 SLFKDGIEPMWEDEKNKRGGRWLITLNKQQ---RRSDLDRFWLETLLCLIGESFDDYSDD 148 LFK+GI+PMWED N +GGRWL+ ++KQ+ R LD +WLE L+ ++GE FD+Y D Sbjct: 62 YLFKEGIKPMWEDVNNVQGGRWLVVVDKQKLQRRTQLLDHYWLELLMAIVGEQFDEYGDY 121 Query: 149 VCGAVVNVRAKGDKIAIWTTECENREAVTHIGRVYKERLGLPPKIVIGYQSHADTATKSG 208 +CGAVVNVR KGDK+++WT + + IG+V K++L +P ++ Y+ H D++ ++ Sbjct: 122 ICGAVVNVRQKGDKVSLWTRDATRDDVNLRIGQVLKQKLSIPDTEILRYEVHKDSSARTS 181 Query: 209 STTKNRFVV 217 ST K R + Sbjct: 182 STVKPRICL 190 >4AXG-A nrPDB Length = 248 Score = 251 bits (640), Expect = 2e-67, Method: Composition-based stats. Identities = 110/250 (44%), Positives = 142/250 (56%), Gaps = 35/250 (14%) Query: 1 MATVEPETTPTPN-------PPTTEEEKTESN--------QEVANP-------------- 31 M +E E T P+ PPT+ E+ QE P Sbjct: 1 MVVLETEKTSAPSTEQGRPEPPTSAAAPAEAKDVKPKEDPQETGEPAGNTATTTAPAGDD 60 Query: 32 ----EHYIKHPLQNRWALWFFKNDKSKTWQANLRLISKFDTVEDFWALYNHIQLSSNLMP 87 EH KHPL N W LW+ +ND+SK+W+ I+ FDTVEDFW+LYNHI+ S + Sbjct: 61 AVRTEHLYKHPLMNVWTLWYLENDRSKSWEDMQNEITSFDTVEDFWSLYNHIKPPSEIKL 120 Query: 88 GCDYSLFKDGIEPMWEDEKNKRGGRWLITLNKQQRRSDLDRFWLETLLCLIGESFDDYSD 147 G DYSLFK I PMWED NK+GGRW+ITLNK ++DLD WL+ LLCLIGE+F D+SD Sbjct: 121 GSDYSLFKKNIRPMWEDAANKQGGRWVITLNKSS-KTDLDNLWLDVLLCLIGEAF-DHSD 178 Query: 148 DVCGAVVNVRAKGDKIAIWTTECENREAVTHIGRVYKERLGLPPKIVIGYQSHADTATKS 207 +CGAV+N+R K +KI+IWT + N EA IG ++ L L + YQ H DT K Sbjct: 179 QICGAVINIRGKSNKISIWTADGNNEEAALEIGHKLRDALRLGRNNSLQYQLHKDTMVKQ 238 Query: 208 GSTTKNRFVV 217 GS K+ + + Sbjct: 239 GSNVKSIYTL 248 >4UEC-A nrPDB Length = 184 Score = 247 bits (631), Expect = 2e-66, Method: Composition-based stats. Identities = 96/183 (52%), Positives = 125/183 (68%), Gaps = 2/183 (1%) Query: 35 IKHPLQNRWALWFFKNDKSKTWQANLRLISKFDTVEDFWALYNHIQLSSNLMPGCDYSLF 94 +KHPL N W LW+ +ND+SK+W+ I+ FDTVEDFW+LYNHI+ S + G DYSLF Sbjct: 4 MKHPLMNVWTLWYLENDRSKSWEDMQNEITSFDTVEDFWSLYNHIKPPSEIKLGSDYSLF 63 Query: 95 KDGIEPMWEDEKNKRGGRWLITLNKQQRRSDLDRFWLETLLCLIGESFDDYSDDVCGAVV 154 K I PMWED NK+GGRW+ITLNK ++DLD WL+ LLCLIGE+F D+SD +CGAV+ Sbjct: 64 KKNIRPMWEDAANKQGGRWVITLNKSS-KTDLDNLWLDVLLCLIGEAF-DHSDQICGAVI 121 Query: 155 NVRAKGDKIAIWTTECENREAVTHIGRVYKERLGLPPKIVIGYQSHADTATKSGSTTKNR 214 N+R K +KI+IWT + N EA IG ++ L L + YQ H DT K GS K+ Sbjct: 122 NIRGKSNKISIWTADGNNEEAALEIGHKLRDALRLGRNNSLQYQLHKDTMVKQGSNVKSI 181 Query: 215 FVV 217 + + Sbjct: 182 YTL 184 >5ME5-A nrPDB Length = 237 Score = 242 bits (618), Expect = 8e-65, Method: Composition-based stats. Identities = 78/185 (42%), Positives = 99/185 (53%), Gaps = 11/185 (5%) Query: 36 KHPLQNRWALWFFKND---KSKTWQANLRLISKFDTVEDFWALYNHIQLSSNLMPGCDYS 92 HPL++ W WF K TW A++R I F TVE+FW++YN+I S L D Sbjct: 61 PHPLEHSWTFWFDNPSAKSKQATWGASIRPIYTFSTVEEFWSVYNNIHHPSKLAMRADLY 120 Query: 93 LFKDGIEPMWEDEKNKRGGRWLITLNKQQRRSDLDRFWLETLLCLIGESFDDYSDDVCGA 152 FK IEP WED GG+W + R D WL TLL +IGE F D D++CGA Sbjct: 121 CFKHKIEPKWEDPVCANGGKWTVNFP----RGKSDNGWLYTLLAMIGEQF-DCGDEICGA 175 Query: 153 VVNVRAKGDKIAIWTTECENREAVTHIGRVYKERLGLPPKIVIGYQSHADTATKSGSTTK 212 VVNVR+ DKI+IWT N A IG+ +KE L IG+ H D A K K Sbjct: 176 VVNVRSGQDKISIWTKNASNEAAQASIGKQWKEFLDY--NESIGFIFH-DDAKKFDRHAK 232 Query: 213 NRFVV 217 N+++V Sbjct: 233 NKYMV 237 >5ME6-A nrPDB Length = 186 Score = 240 bits (611), Expect = 5e-64, Method: Composition-based stats. Identities = 78/185 (42%), Positives = 99/185 (53%), Gaps = 11/185 (5%) Query: 36 KHPLQNRWALWFFKND---KSKTWQANLRLISKFDTVEDFWALYNHIQLSSNLMPGCDYS 92 HPL++ W WF K TW A++R I F TVE+FW++YN+I S L D Sbjct: 10 PHPLEHSWTFWFDNPSAKSKQATWGASIRPIYTFSTVEEFWSVYNNIHHPSKLAMRADLY 69 Query: 93 LFKDGIEPMWEDEKNKRGGRWLITLNKQQRRSDLDRFWLETLLCLIGESFDDYSDDVCGA 152 FK IEP WED GG+W + R D WL TLL +IGE F D D++CGA Sbjct: 70 CFKHKIEPKWEDPVCANGGKWTVNFP----RGKSDNGWLYTLLAMIGEQF-DCGDEICGA 124 Query: 153 VVNVRAKGDKIAIWTTECENREAVTHIGRVYKERLGLPPKIVIGYQSHADTATKSGSTTK 212 VVNVR+ DKI+IWT N A IG+ +KE L IG+ H D A K K Sbjct: 125 VVNVRSGQDKISIWTKNASNEAAQASIGKQWKEFLDY--NESIGFIFH-DDAKKFDRHAK 181 Query: 213 NRFVV 217 N+++V Sbjct: 182 NKYMV 186 >2WMC-A nrPDB Length = 178 Score = 234 bits (598), Expect = 2e-62, Method: Composition-based stats. Identities = 75/186 (40%), Positives = 99/186 (53%), Gaps = 11/186 (5%) Query: 35 IKHPLQNRWALWFFKN---DKSKTWQANLRLISKFDTVEDFWALYNHIQLSSNLMPGCDY 91 + H L+N W WF K W +++R I F TVE+FW++YN+I L G D+ Sbjct: 1 MPHLLENSWTFWFDTPAAKSKQAAWGSSMRPIYTFSTVEEFWSIYNNIHHPGKLAVGADF 60 Query: 92 SLFKDGIEPMWEDEKNKRGGRWLITLNKQQRRSDLDRFWLETLLCLIGESFDDYSDDVCG 151 FK IEP WED GG+W K D WL TLL +IGE F D+ D++CG Sbjct: 61 YCFKHKIEPKWEDPICANGGKWTANYPK----GKSDTSWLYTLLAMIGEQF-DHGDEICG 115 Query: 152 AVVNVRAKGDKIAIWTTECENREAVTHIGRVYKERLGLPPKIVIGYQSHADTATKSGSTT 211 AVVNVR + +KI+IWT N A IG+ +KE L +G+ H D A K Sbjct: 116 AVVNVRGRAEKISIWTKNASNEAAQVSIGKQWKEFLDY--NETMGFIFH-DDARKLDRNA 172 Query: 212 KNRFVV 217 KN++VV Sbjct: 173 KNKYVV 178 >2IDR-A nrPDB Length = 177 Score = 233 bits (593), Expect = 7e-62, Method: Composition-based stats. Identities = 80/185 (43%), Positives = 102/185 (55%), Gaps = 11/185 (5%) Query: 36 KHPLQNRWALWFFKN---DKSKTWQANLRLISKFDTVEDFWALYNHIQLSSNLMPGCDYS 92 HPL+N W WF + W + + I F TVEDFW LYN+I S L G D+ Sbjct: 1 AHPLENAWTFWFDNPQGKSRQVAWGSTIHPIHTFSTVEDFWGLYNNIHNPSKLNVGADFH 60 Query: 93 LFKDGIEPMWEDEKNKRGGRWLITLNKQQRRSDLDRFWLETLLCLIGESFDDYSDDVCGA 152 FK+ IEP WED GG+W I+ R D FWL TLL +IGE F D+ D++CGA Sbjct: 61 CFKNKIEPKWEDPICANGGKWTISCG----RGKSDTFWLHTLLAMIGEQF-DFGDEICGA 115 Query: 153 VVNVRAKGDKIAIWTTECENREAVTHIGRVYKERLGLPPKIVIGYQSHADTATKSGSTTK 212 VV+VR K +++AIWT N A IG+ +KE L K IG+ H D A +S K Sbjct: 116 VVSVRQKQERVAIWTKNAANEAAQISIGKQWKEFLDY--KDSIGFIVHED-AKRSDKGPK 172 Query: 213 NRFVV 217 NR+ V Sbjct: 173 NRYTV 177 >2JGB-A nrPDB Length = 195 Score = 229 bits (585), Expect = 5e-61, Method: Composition-based stats. Identities = 62/186 (33%), Positives = 101/186 (54%), Gaps = 10/186 (5%) Query: 36 KHPLQNRWALWFFK-----NDKSKTWQANLRLISKFDTVEDFWALYNHIQLSSNLMPGCD 90 +HPLQ + W+ + S++++ N++ I F +VE FW Y+H+ +L D Sbjct: 14 EHPLQYNYTFWYSRRTPGRPTSSQSYEQNIKQIGTFASVEQFWRFYSHMVRPGDLTGHSD 73 Query: 91 YSLFKDGIEPMWEDEKNKRGGRWLITLNKQQRRSDLDRFWLETLLCLIGESFDDYSDDVC 150 + LFK+GI+PMWED+ NK GG+W+I L R+ R W +L ++GE F +++C Sbjct: 74 FHLFKEGIKPMWEDDANKNGGKWIIRL----RKGLASRCWENLILAMLGEQF-MVGEEIC 128 Query: 151 GAVVNVRAKGDKIAIWTTECENREAVTHIGRVYKERLGLPPKIVIGYQSHADTATKSGST 210 GAVV+VR + D I+IW ++ I + L LPP ++ Y++H D+ G Sbjct: 129 GAVVSVRFQEDIISIWNKTASDQATTARIRDTLRRVLNLPPNTIMEYKTHTDSIKMPGRL 188 Query: 211 TKNRFV 216 R + Sbjct: 189 GPQRLL 194 >6FBZ-A nrPDB Length = 200 Score = 229 bits (584), Expect = 7e-61, Method: Composition-based stats. Identities = 77/187 (41%), Positives = 107/187 (57%), Gaps = 5/187 (2%) Query: 35 IKHPLQNRWALWFFKN--DKSKTWQANLRLISKFDTVEDFWALYNHIQLSSNLMPGCDYS 92 +KHPL RW LWF K K W L+ + F++VE+FW +YN+I S L DY Sbjct: 15 VKHPLSCRWTLWFTKPASGKGDNWNDLLKKVITFESVEEFWGIYNNIAPVSELAVKSDYH 74 Query: 93 LFKDGIEPMWEDEKNKRGGRWLITLNKQQRRSDLDRFWLETLLCLIGESFDDYSD-DVCG 151 LFK+G+ P WED +NK GG+W K +R ++D WL T+L IGE+ +D D +V G Sbjct: 75 LFKEGVRPEWEDPQNKHGGKWAYQF-KDKRSVNIDELWLHTMLAAIGETLEDEEDGEVMG 133 Query: 152 AVVNVRAKGDKIAIWTTECE-NREAVTHIGRVYKERLGLPPKIVIGYQSHADTATKSGST 210 VVNVR +I +WT E ++E + +IGR KE L LPP ++ + H + A + Sbjct: 134 VVVNVRKGFYRIGVWTRTTEKSKEILMNIGRRLKEVLKLPPNEMVEFSGHTEAAQAGSTR 193 Query: 211 TKNRFVV 217 K R VV Sbjct: 194 AKARMVV 200 >3HXI-A nrPDB Length = 189 Score = 221 bits (564), Expect = 1e-58, Method: Composition-based stats. Identities = 67/192 (34%), Positives = 100/192 (52%), Gaps = 7/192 (3%) Query: 28 VANPEHYIKHPLQNRWALWFFKNDKSKTWQANLRLISKFDTVEDFWALYNHIQLSSNLMP 87 + +PE HPLQ+ W+ + F+ K+ W L ++ F T+EDFW++ H + Sbjct: 3 LGSPE--FPHPLQDSWSYYLFQFRKALDWDECLEKVATFSTIEDFWSVLTHTVRPREITY 60 Query: 88 GCDYSLFKDGIEPMWEDEKNKRGGRWLITLNKQQRRSDLDRFWLETLLCLIGESFDDYSD 147 G D +FK I P WED KN+ GGRWLI + +Q D+D W E L+ LIG +D + Sbjct: 61 GKDLYMFKSDIMPKWEDPKNENGGRWLINVTARQ---DVDFLWDELLMLLIGSDWDTDEE 117 Query: 148 D--VCGAVVNVRAKGDKIAIWTTECENREAVTHIGRVYKERLGLPPKIVIGYQSHADTAT 205 D +CGAV R++G K+++W T E + IGR KERL L I S + T Sbjct: 118 DRQICGAVFQPRSRGSKLSVWLTSDNEEETILSIGRRIKERLELEDTIYFQPVSDQRSQT 177 Query: 206 KSGSTTKNRFVV 217 + ++ + Sbjct: 178 RGSDICTGKYEI 189 >6FC1-A nrPDB Length = 193 Score = 209 bits (532), Expect = 8e-55, Method: Composition-based stats. Identities = 65/193 (33%), Positives = 108/193 (55%), Gaps = 9/193 (4%) Query: 28 VANPEHY-IKHPLQNRWALWFFKN--DKSKTWQANLRLISKFDTVEDFWALYNHIQLSSN 84 +++ H+ +KHPL W LW+ K DKS++W LR ++ F TVE+FWA+ +I Sbjct: 7 LSDSAHFDVKHPLNTAWTLWYTKPAVDKSESWSDLLRPVTSFQTVEEFWAIIQNIPEPHE 66 Query: 85 LMPGCDYSLFKDGIEPMWEDEKNKRGGRWLITLNKQQRRSDLDRFWLETLLCLIGESFDD 144 L DY +F++ + P WEDE N +GG+W L + +D+D WL TLL +IGE+ D+ Sbjct: 67 LPLKSDYHVFRNDVRPEWEDEANAKGGKWSFQL--RGAGADIDELWLRTLLAVIGETIDE 124 Query: 145 YSDDVCGAVVNVRAKGDKIAIWTTECENREAVTHIGRVYKERLGLPPKIVIGYQSHADTA 204 + G V+++R G+K A+WT E++E + IG +K+ L L + + H + Sbjct: 125 DDSQINGVVLSIRKGGNKFALWTA-SEDKEPLLRIGGKFKQVLALTDDGHLEFFPH---S 180 Query: 205 TKSGSTTKNRFVV 217 + +G + + Sbjct: 181 SANGRHPQPSITL 193 >4B6U-A nrPDB Length = 207 Score = 199 bits (506), Expect = 7e-52, Method: Composition-based stats. Identities = 51/182 (28%), Positives = 84/182 (46%), Gaps = 11/182 (6%) Query: 38 PLQNRWALWFFKNDKSKT---WQANLRLISKFDTVEDFWALYNHIQLSSNLMPGCDYSLF 94 PL + W W ++ T +NL+ I TV+ FW++YN+I ++L C Y L Sbjct: 31 PLHSPWTFWLDRSLPGATAAECASNLKKIYTVQTVQIFWSVYNNIPPVTSLPLRCSYHLM 90 Query: 95 KDGIEPMWEDEKNKRGGRWLITLNKQQRRSDLDRFWLETLLCLIGESFDDY---SDDVCG 151 + P+WE+E N +GG W + + K + W E LL IGE F D D++ G Sbjct: 91 RGERRPLWEEESNAKGGVWKMKVPKDSTST----VWKELLLATIGEQFTDCAAADDEIIG 146 Query: 152 AVVNVRAKGDKIAIWTTECENREAVTHIGRVYKERLGLPPKIVIGYQSHADTATKSGSTT 211 V+VR + D + +W T + ++++ + K V Y+ H + G Sbjct: 147 VSVSVRDREDVVQVWNVNASLVGEATVLEKIHQLLPHIAFKAVF-YKPHEEHHAFEGGRG 205 Query: 212 KN 213 K+ Sbjct: 206 KH 207 >5WB5-A nrPDB Length = 219 Score = 187 bits (475), Expect = 3e-48, Method: Composition-based stats. Identities = 48/207 (23%), Positives = 90/207 (43%), Gaps = 33/207 (15%) Query: 31 PEHYIK--HPLQNRWALWFFKNDKSKT--WQANLRLISKFDTVEDFWALYNHIQLSSNLM 86 P H + H LQ W LW+ T W+ +L I +VE+F+ + +++ L Sbjct: 13 PPHKMANLHKLQRAWTLWYDSPSTYNTENWEMSLVPIMTVHSVEEFFVMLRYMKPLHALR 72 Query: 87 PGCDYSLFKDGIEPMWEDEKNKRGGRWLITLN----------------------KQQRRS 124 Y F++G++PMWED NK+GG+ + L+ + ++ Sbjct: 73 TSSQYHFFQEGVKPMWEDPANKKGGKLWVNLDITSANGRSSNNNTSGTSAADGSAAEAKT 132 Query: 125 DLDRFWLETLLCLIGESFD--DYSDD-----VCGAVVNVRAKGDKIAIWTTECENREAVT 177 DLD+ W L+ +GE D D D V G V++ R +++A+W ++ + + Sbjct: 133 DLDKAWENVLMATVGEYLDCVDKKDTPTEPFVTGIVMSKRKYHNRLAVWVSDASATDKIE 192 Query: 178 HIGRVYKERLGLPPKIVIGYQSHADTA 204 + + + L P + + H + + Sbjct: 193 ALKKALTKEASLAPIASMVFTKHGEAS 219 >6O80-A nrPDB Length = 222 Score = 54.3 bits (129), Expect = 4e-08, Method: Composition-based stats. Identities = 40/202 (19%), Positives = 75/202 (37%), Gaps = 28/202 (13%) Query: 35 IKHPLQNRWALWF------------FKNDKSKTWQANLRLISKFDTVEDFWALYNHIQLS 82 H L++ W L + FK D +K QA + + TVE+FW+ N + Sbjct: 26 TAHALKDPWFLSYIPQLTPDTVKYDFKGDWNKAKQALQQPLDYIRTVEEFWSTINSLPKL 85 Query: 83 SNLMPGCDYSLFKDGIEPMWEDEKNKRGGRWLITLNKQQRRSDLDRFWLETLLCLIGESF 142 L G + ++ ++ +E G R L+ L K ++ L ++GE Sbjct: 86 HQLGNGSTFIFARNNVDASYE--AFPNGTRVLVDLYKASV---AEKGMDFVLSSVLGEGL 140 Query: 143 DDY---SDDVCGAV-VNVRAKGD-----KIAIWTTECE-NREAVTHIGRVYKER-LGLPP 191 VC V ++ R + ++ +W ++ ++ + +I + E L Sbjct: 141 TYDVFNGKKVCDVVRLSSRPNQESPELVRLEVWLSDQLYAKDVIPYIRKGLNEAGLSFTD 200 Query: 192 KIVIGYQSHADTATKSGSTTKN 213 I+ D S S K+ Sbjct: 201 FIMGESTFEKDKKKPSVSGAKS 222 >1RYX-A nrPDB Length = 686 Score = 30.1 bits (66), Expect = 0.85, Method: Composition-based stats. Identities = 8/26 (30%), Positives = 12/26 (46%) Query: 69 VEDFWALYNHIQLSSNLMPGCDYSLF 94 VED W+ + Q + D+ LF Sbjct: 260 VEDIWSFLSKAQSDFGVDTKSDFHLF 285 >4JS2-A nrPDB Length = 318 Score = 27.8 bits (60), Expect = 4.2, Method: Composition-based stats. Identities = 3/28 (10%), Positives = 13/28 (46%) Query: 163 IAIWTTECENREAVTHIGRVYKERLGLP 190 +W + ++ + + +++K L + Sbjct: 5 FQVWNKDSSSKNLIPRLQKIWKNYLSMN 32 >5GM5-A nrPDB Length = 220 Score = 27.0 bits (58), Expect = 6.5, Method: Composition-based stats. Identities = 12/51 (23%), Positives = 19/51 (37%), Gaps = 5/51 (9%) Query: 43 WALWFFKNDKSKTWQ-ANLRLISKFD-TVEDFWALYNHIQLSSNLMPGCDY 91 W LW+ N KT+ I+ F V DF+ ++ + Y Sbjct: 145 WELWYGANGSQKTYSFVAPTPITSFQGDVNDFF---KYLTQNHGFPASSQY 192 >6HQG-A nrPDB Length = 425 Score = 26.6 bits (57), Expect = 7.8, Method: Composition-based stats. Identities = 10/43 (23%), Positives = 18/43 (41%), Gaps = 1/43 (2%) Query: 160 GDKIAIWTTECE-NREAVTHIGRVYKERLGLPPKIVIGYQSHA 201 GDK+A+W + E + + ER + + G+ H Sbjct: 330 GDKVAMWYVSGNRDEEVIDRPNDYWIERPRVRQHLSFGFGVHR 372 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.309 0.131 0.390 Lambda K H 0.267 0.0399 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 9,156,561 Number of Sequences: 36641 Number of extensions: 366562 Number of successful extensions: 1038 Number of sequences better than 10.0: 22 Number of HSP's better than 10.0 without gapping: 41 Number of HSP's successfully gapped in prelim test: 5 Number of HSP's that attempted gapping in prelim test: 925 Number of HSP's gapped (non-prelim): 47 length of query: 217 length of database: 10,336,785 effective HSP length: 93 effective length of query: 124 effective length of database: 6,929,172 effective search space: 859217328 effective search space used: 859217328 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.2 bits) S2: 57 (26.6 bits)