BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= P06624 (263 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 1YMG-A nrPDB 526 e-150 3M9I-A nrPDB 429 e-121 4OJ2-X nrPDB 308 2e-84 4NEF-A nrPDB 299 7e-82 3D9S-A nrPDB 263 7e-71 1J4N-A nrPDB 241 2e-64 2ZZ9-A nrPDB 241 2e-64 3IYZ-A nrPDB 241 3e-64 1IH5-A nrPDB 238 3e-63 3GD8-A nrPDB 228 2e-60 5I32-A nrPDB 139 1e-33 3CLL-A nrPDB 129 9e-31 2W1P-A nrPDB 93 1e-19 2EVU-A nrPDB 91 4e-19 2O9F-A nrPDB 89 2e-18 3NE2-A nrPDB 85 3e-17 3LLQ-A nrPDB 83 1e-16 1LDI-A nrPDB 70 1e-12 3C02-A nrPDB 56 2e-08 6F7H-A nrPDB 51 4e-07 4O23-A nrPDB 28 3.2 >1YMG-A nrPDB Length = 263 Score = 526 bits (1355), Expect = e-150, Method: Compositional matrix adjust. Identities = 263/263 (100%), Positives = 263/263 (100%) Query: 1 MWELRSASFWRAICAEFFASLFYVFFGLGASLRWAPGPLHVLQVALAFGLALATLVQAVG 60 MWELRSASFWRAICAEFFASLFYVFFGLGASLRWAPGPLHVLQVALAFGLALATLVQAVG Sbjct: 1 MWELRSASFWRAICAEFFASLFYVFFGLGASLRWAPGPLHVLQVALAFGLALATLVQAVG 60 Query: 61 HISGAHVNPAVTFAFLVGSQMSLLRAICYMVAQLLGAVAGAAVLYSVTPPAVRGNLALNT 120 HISGAHVNPAVTFAFLVGSQMSLLRAICYMVAQLLGAVAGAAVLYSVTPPAVRGNLALNT Sbjct: 61 HISGAHVNPAVTFAFLVGSQMSLLRAICYMVAQLLGAVAGAAVLYSVTPPAVRGNLALNT 120 Query: 121 LHPGVSVGQATIVEIFLTLQFVLCIFATYDERRNGRLGSVALAVGFSLTLGHLFGMYYTG 180 LHPGVSVGQATIVEIFLTLQFVLCIFATYDERRNGRLGSVALAVGFSLTLGHLFGMYYTG Sbjct: 121 LHPGVSVGQATIVEIFLTLQFVLCIFATYDERRNGRLGSVALAVGFSLTLGHLFGMYYTG 180 Query: 181 AGMNPARSFAPAILTRNFTNHWVYWVGPVIGAGLGSLLYDFLLFPRLKSVSERLSILKGS 240 AGMNPARSFAPAILTRNFTNHWVYWVGPVIGAGLGSLLYDFLLFPRLKSVSERLSILKGS Sbjct: 181 AGMNPARSFAPAILTRNFTNHWVYWVGPVIGAGLGSLLYDFLLFPRLKSVSERLSILKGS 240 Query: 241 RPSESNGQPEVTGEPVELKTQAL 263 RPSESNGQPEVTGEPVELKTQAL Sbjct: 241 RPSESNGQPEVTGEPVELKTQAL 263 >3M9I-A nrPDB Length = 220 Score = 429 bits (1103), Expect = e-121, Method: Compositional matrix adjust. Identities = 217/220 (98%), Positives = 219/220 (99%) Query: 7 ASFWRAICAEFFASLFYVFFGLGASLRWAPGPLHVLQVALAFGLALATLVQAVGHISGAH 66 ASFWRAI AEFFA+LFYVFFGLGASLRWAPGPLHVLQVALAFGLALATLVQAVGHISGAH Sbjct: 1 ASFWRAIFAEFFATLFYVFFGLGASLRWAPGPLHVLQVALAFGLALATLVQAVGHISGAH 60 Query: 67 VNPAVTFAFLVGSQMSLLRAICYMVAQLLGAVAGAAVLYSVTPPAVRGNLALNTLHPGVS 126 VNPAVTFAFLVGSQMSLLRAICY+VAQLLGAVAGAAVLYSVTPPAVRGNLALNTLHPGVS Sbjct: 61 VNPAVTFAFLVGSQMSLLRAICYVVAQLLGAVAGAAVLYSVTPPAVRGNLALNTLHPGVS 120 Query: 127 VGQATIVEIFLTLQFVLCIFATYDERRNGRLGSVALAVGFSLTLGHLFGMYYTGAGMNPA 186 VGQATIVEIFLTLQFVLCIFATYDERRNGRLGSVALAVGFSLTLGHLFGMYYTGAGMNPA Sbjct: 121 VGQATIVEIFLTLQFVLCIFATYDERRNGRLGSVALAVGFSLTLGHLFGMYYTGAGMNPA 180 Query: 187 RSFAPAILTRNFTNHWVYWVGPVIGAGLGSLLYDFLLFPR 226 RSFAPAILTRNFTNHWVYWVGPVIGAGLGSLLYDFLLFPR Sbjct: 181 RSFAPAILTRNFTNHWVYWVGPVIGAGLGSLLYDFLLFPR 220 >4OJ2-X nrPDB Length = 274 Score = 308 bits (789), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 153/261 (58%), Positives = 198/261 (75%), Gaps = 1/261 (0%) Query: 1 MWELRSASFWRAICAEFFASLFYVFFGLGASLRWAPGPLHVLQVALAFGLALATLVQAVG 60 MWELRS +F RA+ AEF A+L +VFFGLG++L W VLQ+A+AFGL + TLVQA+G Sbjct: 4 MWELRSIAFSRAVFAEFLATLLFVFFGLGSALNWPQALPSVLQIAMAFGLGIGTLVQALG 63 Query: 61 HISGAHVNPAVTFAFLVGSQMSLLRAICYMVAQLLGAVAGAAVLYSVTPPAVRGNLALNT 120 HISGAH+NPAVT A LVG +S+LRA Y+ AQLLGAVAGAA+L+ +TP +RG+LA+N Sbjct: 64 HISGAHINPAVTVACLVGCHVSVLRAAFYVAAQLLGAVAGAALLHEITPADIRGDLAVNA 123 Query: 121 LHPGVSVGQATIVEIFLTLQFVLCIFATYDERRNGRLGSVALAVGFSLTLGHLFGMYYTG 180 L + GQA VE+FLTLQ VLCIFA+ DERR G+ AL++GFS+ LGHL G++YTG Sbjct: 124 LSNSTTAGQAVTVELFLTLQLVLCIFASTDERRGENPGTPALSIGFSVALGHLLGIHYTG 183 Query: 181 AGMNPARSFAPAILTRNFTNHWVYWVGPVIGAGLGSLLYDFLLFPRLKSVSERLSILKGS 240 MNPARS APA++T F +HWV+W+GP++GA LGSLLY+++LFP KS+SERL++LKG Sbjct: 184 CSMNPARSLAPAVVTGKFDDHWVFWIGPLVGAILGSLLYNYVLFPPAKSLSERLAVLKGL 243 Query: 241 RPSESNGQPEV-TGEPVELKT 260 P + EV + VEL + Sbjct: 244 EPDTDWEEREVRRRQAVELHS 264 >4NEF-A nrPDB Length = 242 Score = 299 bits (766), Expect = 7e-82, Method: Compositional matrix adjust. Identities = 146/240 (60%), Positives = 188/240 (78%) Query: 3 ELRSASFWRAICAEFFASLFYVFFGLGASLRWAPGPLHVLQVALAFGLALATLVQAVGHI 62 ELRS +F RA+ AEF A+L +VFFGLG++L W VLQ+A+AFGL + TLVQA+GHI Sbjct: 3 ELRSIAFSRAVFAEFLATLLFVFFGLGSALNWPQALPSVLQIAMAFGLGIGTLVQALGHI 62 Query: 63 SGAHVNPAVTFAFLVGSQMSLLRAICYMVAQLLGAVAGAAVLYSVTPPAVRGNLALNTLH 122 SGAH+NPAVT A LVG +S+LRA Y+ AQLLGAVAGAA+L+ +TP +RG+LA+N L Sbjct: 63 SGAHINPAVTVACLVGCHVSVLRAAFYVAAQLLGAVAGAALLHEITPADIRGDLAVNALS 122 Query: 123 PGVSVGQATIVEIFLTLQFVLCIFATYDERRNGRLGSVALAVGFSLTLGHLFGMYYTGAG 182 + GQA VE+FLTLQ VLCIFA+ DERR G+ AL++GFS+ LGHL G++YTG Sbjct: 123 NSTTAGQAVTVELFLTLQLVLCIFASTDERRGENPGTPALSIGFSVALGHLLGIHYTGCS 182 Query: 183 MNPARSFAPAILTRNFTNHWVYWVGPVIGAGLGSLLYDFLLFPRLKSVSERLSILKGSRP 242 MNPARS APA++T F +HWV+W+GP++GA LGSLLY+++LFP KS+SERL++LKG P Sbjct: 183 MNPARSLAPAVVTGKFDDHWVFWIGPLVGAILGSLLYNYVLFPPAKSLSERLAVLKGLEP 242 >3D9S-A nrPDB Length = 266 Score = 263 bits (671), Expect = 7e-71, Method: Compositional matrix adjust. Identities = 139/262 (53%), Positives = 190/262 (72%), Gaps = 3/262 (1%) Query: 3 ELRSASFWRAICAEFFASLFYVFFGLGASLRWAPGPLHVLQVALAFGLALATLVQAVGHI 62 E+ S +F +A+ AEF A+L +VFFGLG++L+W +LQ+ALAFGLA+ TL QA+G + Sbjct: 5 EVCSVAFLKAVFAEFLATLIFVFFGLGSALKWPSALPTILQIALAFGLAIGTLAQALGPV 64 Query: 63 SGAHVNPAVTFAFLVGSQMSLLRAICYMVAQLLGAVAGAAVLYSVTPPAVRGNLALNTLH 122 SG H+NPA+T A LVG+Q+SLLRA Y+ AQL+GA+AGA +LY V P RGNLA+N L+ Sbjct: 65 SGGHINPAITLALLVGNQISLLRAFFYVAAQLVGAIAGAGILYGVAPLNARGNLAVNALN 124 Query: 123 PGVSVGQATIVEIFLTLQFVLCIFATYDERRNGRLGSVALAVGFSLTLGHLFGMYYTGAG 182 + GQA +VE+ LT Q LCIFA+ D RR +GS AL++G S+TLGHL G+Y+TG Sbjct: 125 NNTTQGQAMVVELILTFQLALCIFASTDSRRTSPVGSPALSIGLSVTLGHLVGIYFTGCS 184 Query: 183 MNPARSFAPAILTRNFT-NHWVYWVGPVIGAGLGSLLYDFLLFPRLKSVSERLSILKGS- 240 MNPARSF PA++ F+ HWV+WVGP++GA L ++LY +LLFP S+SER++I+KG+ Sbjct: 185 MNPARSFGPAVVMNRFSPAHWVFWVGPIVGAVLAAILYFYLLFPNSLSLSERVAIIKGTY 244 Query: 241 RPSES-NGQPEVTGEPVELKTQ 261 P E Q E + +EL T+ Sbjct: 245 EPDEDWEEQREERKKTMELTTR 266 >1J4N-A nrPDB Length = 271 Score = 241 bits (616), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 119/268 (44%), Positives = 170/268 (63%), Gaps = 9/268 (3%) Query: 3 ELRSASFWRAICAEFFASLFYVFFGLGASL--------RWAPGPLHV-LQVALAFGLALA 53 E + FWRA+ AEF A + ++F +G++L G + ++V+LAFGL++A Sbjct: 4 EFKKKLFWRAVVAEFLAMILFIFISIGSALGFHYPIKSNQTTGAVQDNVKVSLAFGLSIA 63 Query: 54 TLVQAVGHISGAHVNPAVTFAFLVGSQMSLLRAICYMVAQLLGAVAGAAVLYSVTPPAVR 113 TL Q+VGHISGAH+NPAVT L+ Q+S+LRAI Y++AQ +GA+ A+L +T Sbjct: 64 TLAQSVGHISGAHLNPAVTLGLLLSCQISVLRAIMYIIAQCVGAIVATAILSGITSSLPD 123 Query: 114 GNLALNTLHPGVSVGQATIVEIFLTLQFVLCIFATYDERRNGRLGSVALAVGFSLTLGHL 173 +L LN L PGV+ GQ +EI TLQ VLC+ AT D RR GS LA+GFS+ LGHL Sbjct: 124 NSLGLNALAPGVNSGQGLGIEIIGTLQLVLCVLATTDRRRRDLGGSGPLAIGFSVALGHL 183 Query: 174 FGMYYTGAGMNPARSFAPAILTRNFTNHWVYWVGPVIGAGLGSLLYDFLLFPRLKSVSER 233 + YTG G+NPARSF +++T NF +HW++WVGP IGA L L+YDF+L PR +++R Sbjct: 184 LAIDYTGCGINPARSFGSSVITHNFQDHWIFWVGPFIGAALAVLIYDFILAPRSSDLTDR 243 Query: 234 LSILKGSRPSESNGQPEVTGEPVELKTQ 261 + + + E + + VE+K + Sbjct: 244 VKVWTSGQVEEYDLDADDINSRVEMKPK 271 >2ZZ9-A nrPDB Length = 301 Score = 241 bits (615), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 117/265 (44%), Positives = 173/265 (65%), Gaps = 11/265 (4%) Query: 6 SASFWRAICAEFFASLFYVFFGLGASLRWA----PGPLHVLQVALAFGLALATLVQAVGH 61 + +FW+A+ AEF A L +V +G+++ W P P+ ++ ++L FGL++AT+VQ GH Sbjct: 9 TQAFWKAVTAEFLAMLIFVLLSVGSTINWGGSENPLPVDMVLISLCFGLSIATMVQCFGH 68 Query: 62 ISGAHVNPAVTFAFLVGSQMSLLRAICYMVAQLLGAVAGAAVLYSVTPPAVRGNLALNTL 121 ISG H+NPAVT A + ++S+ +++ Y+ AQ LGA+ GA +LY VTPP+V G L + T+ Sbjct: 69 ISGGHINPAVTVAMVCTRKISIAKSVFYITAQCLGAIIGAGILYLVTPPSVVGGLGVTTV 128 Query: 122 HPGVSVGQATIVEIFLTLQFVLCIFATYDERRNGRLGSVALAVGFSLTLGHLFGMYYTGA 181 H ++ G +VE+ +T Q V IFA+ D++R GSVALA+GFS+ +GHLF + YTGA Sbjct: 129 HGNLTAGHGLLVELIITFQLVFTIFASCDDKRTDVTGSVALAIGFSVAIGHLFAINYTGA 188 Query: 182 GMNPARSFAPAILTRNFTNHWVYWVGPVIGAGLGSLLYDFLLFP------RLKSV-SERL 234 MNPARSF PA++ N+ NHW+YWVGP+IGA L LY+++ P RLK S+ Sbjct: 189 SMNPARSFGPAVIMGNWENHWIYWVGPIIGAVLAGALYEYVFCPDVELKRRLKEAFSKAA 248 Query: 235 SILKGSRPSESNGQPEVTGEPVELK 259 KGS + + +V E + LK Sbjct: 249 QQTKGSYMEVEDNRSQVETEDLILK 273 >3IYZ-A nrPDB Length = 340 Score = 241 bits (614), Expect = 3e-64, Method: Compositional matrix adjust. Identities = 117/265 (44%), Positives = 173/265 (65%), Gaps = 11/265 (4%) Query: 6 SASFWRAICAEFFASLFYVFFGLGASLRWA----PGPLHVLQVALAFGLALATLVQAVGH 61 + +FW+A+ AEF A L +V +G+++ W P P+ ++ ++L FGL++AT+VQ GH Sbjct: 48 TQAFWKAVTAEFLAMLIFVLLSVGSTINWGGSENPLPVDMVLISLCFGLSIATMVQCFGH 107 Query: 62 ISGAHVNPAVTFAFLVGSQMSLLRAICYMVAQLLGAVAGAAVLYSVTPPAVRGNLALNTL 121 ISG H+NPAVT A + ++S+ +++ Y+ AQ LGA+ GA +LY VTPP+V G L + T+ Sbjct: 108 ISGGHINPAVTVAMVCTRKISIAKSVFYITAQCLGAIIGAGILYLVTPPSVVGGLGVTTV 167 Query: 122 HPGVSVGQATIVEIFLTLQFVLCIFATYDERRNGRLGSVALAVGFSLTLGHLFGMYYTGA 181 H ++ G +VE+ +T Q V IFA+ D++R GSVALA+GFS+ +GHLF + YTGA Sbjct: 168 HGNLTAGHGLLVELIITFQLVFTIFASCDDKRTDVTGSVALAIGFSVAIGHLFAINYTGA 227 Query: 182 GMNPARSFAPAILTRNFTNHWVYWVGPVIGAGLGSLLYDFLLFP------RLKSV-SERL 234 MNPARSF PA++ N+ NHW+YWVGP+IGA L LY+++ P RLK S+ Sbjct: 228 SMNPARSFGPAVIMGNWENHWIYWVGPIIGAVLAGALYEYVFCPDVELKRRLKEAFSKAA 287 Query: 235 SILKGSRPSESNGQPEVTGEPVELK 259 KGS + + +V E + LK Sbjct: 288 QQTKGSYMEVEDNRSQVETEDLILK 312 >1IH5-A nrPDB Length = 269 Score = 238 bits (606), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 116/266 (43%), Positives = 167/266 (62%), Gaps = 7/266 (2%) Query: 3 ELRSASFWRAICAEFFASLFYVFFGLGASL--RWAPGPLHV-----LQVALAFGLALATL 55 E + FWRA+ AEF A+ +VF +G++L ++ G ++V+LAFGL++ATL Sbjct: 4 EFKKKLFWRAVVAEFLATTLFVFISIGSALGFKYPVGNNQTAVQDNVKVSLAFGLSIATL 63 Query: 56 VQAVGHISGAHVNPAVTFAFLVGSQMSLLRAICYMVAQLLGAVAGAAVLYSVTPPAVRGN 115 Q+VGHISGAH+NPAVT L+ Q+S+ RA+ Y++AQ +GA+ A+L +T + Sbjct: 64 AQSVGHISGAHLNPAVTLGLLLSCQISIFRALMYIIAQCVGAIVATAILSGITSSLTGNS 123 Query: 116 LALNTLHPGVSVGQATIVEIFLTLQFVLCIFATYDERRNGRLGSVALAVGFSLTLGHLFG 175 L N L GV+ GQ +EI TLQ VLC+ AT D RR GS LA+G S+ LGHL Sbjct: 124 LGRNDLADGVNSGQGLGIEIIGTLQLVLCVLATTDRRRRDLGGSAPLAIGLSVALGHLLA 183 Query: 176 MYYTGAGMNPARSFAPAILTRNFTNHWVYWVGPVIGAGLGSLLYDFLLFPRLKSVSERLS 235 + YTG G+NPARSF A++T NF+NHW++WVGP IG L L+YDF+L PR +++R+ Sbjct: 184 IDYTGCGINPARSFGSAVITHNFSNHWIFWVGPFIGGALAVLIYDFILAPRSSDLTDRVK 243 Query: 236 ILKGSRPSESNGQPEVTGEPVELKTQ 261 + + E + + VE+K + Sbjct: 244 VWTSGQVEEYDLDADDINSRVEMKPK 269 >3GD8-A nrPDB Length = 223 Score = 228 bits (582), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 105/222 (47%), Positives = 154/222 (69%), Gaps = 4/222 (1%) Query: 8 SFWRAICAEFFASLFYVFFGLGASLRWA----PGPLHVLQVALAFGLALATLVQAVGHIS 63 +FW+A+ AEF A L +V LG+++ W P P+ ++ ++L FGL++AT+VQ GHIS Sbjct: 2 AFWKAVTAEFLAMLIFVLLSLGSTINWGGTEKPLPVDMVLISLCFGLSIATMVQCFGHIS 61 Query: 64 GAHVNPAVTFAFLVGSQMSLLRAICYMVAQLLGAVAGAAVLYSVTPPAVRGNLALNTLHP 123 G H+NPAVT A + ++S+ +++ Y+ AQ LGA+ GA +LY VTPP+V G L + +H Sbjct: 62 GGHINPAVTVAMVCTRKISIAKSVFYIAAQCLGAIIGAGILYLVTPPSVVGGLGVTMVHG 121 Query: 124 GVSVGQATIVEIFLTLQFVLCIFATYDERRNGRLGSVALAVGFSLTLGHLFGMYYTGAGM 183 ++ G +VE+ +T Q V IFA+ D +R GS+ALA+GFS+ +GHLF + YTGA M Sbjct: 122 NLTAGHGLLVELIITFQLVFTIFASCDSKRTDVTGSIALAIGFSVAIGHLFAINYTGASM 181 Query: 184 NPARSFAPAILTRNFTNHWVYWVGPVIGAGLGSLLYDFLLFP 225 NPARSF PA++ N+ NHW+YWVGP+IGA L LY+++ P Sbjct: 182 NPARSFGPAVIMGNWENHWIYWVGPIIGAVLAGGLYEYVFCP 223 >5I32-A nrPDB Length = 275 Score = 139 bits (351), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 86/222 (38%), Positives = 128/222 (57%), Gaps = 21/222 (9%) Query: 11 RAICAEFFASLFYVFFGLGASLRWA----------PGPLHVLQVALAFGLALATLVQAVG 60 RA AEF ++L +VF G+G+++ +A PG ++ +A+ G AL V Sbjct: 44 RAYLAEFISTLLFVFAGVGSAIAYAKLTSDAALDTPG---LVAIAVCHGFALFVAVAIGA 100 Query: 61 HISGAHVNPAVTFAFLVGSQMSLLRAICYMVAQLLGAVAGAAVLYSVTPPAVRGNLALNT 120 +ISG HVNPAVTF VG Q++++ + Y +AQLLG+ A +L VT G LA+ T Sbjct: 101 NISGGHVNPAVTFGLAVGGQITVITGVFYWIAQLLGSTAACFLLKYVT-----GGLAVPT 155 Query: 121 LHPGVSVG--QATIVEIFLTLQFVLCIFATYDERRNGRLGSVA-LAVGFSLTLGHLFGMY 177 +G + ++EI +T V ++AT + + G LG++A LA+G + L Sbjct: 156 HSVAAGLGSIEGVVMEIIITFALVYTVYATAADPKKGSLGTIAPLAIGLIVGANILAAGP 215 Query: 178 YTGAGMNPARSFAPAILTRNFTNHWVYWVGPVIGAGLGSLLY 219 ++G MNPARSF PA+ +F+ HWVYWVGP+IG GL L+Y Sbjct: 216 FSGGSMNPARSFGPAVAAGDFSGHWVYWVGPLIGGGLAGLIY 257 >3CLL-A nrPDB Length = 300 Score = 129 bits (325), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 80/234 (34%), Positives = 129/234 (55%), Gaps = 13/234 (5%) Query: 3 ELRSASFWRAICAEFFASLFYVFFGLGASLRWAP-----GPLHVLQVALAFGLALATLVQ 57 EL+ SFWRA AEF A+L +++ + + + G + +L +A AFG + LV Sbjct: 50 ELKLWSFWRAAIAEFIATLLFLYITVATVIGHSKETVVCGSVGLLGIAWAFGGMIFVLVY 109 Query: 58 AVGHISGAHVNPAVTFAFLVGSQMSLLRAICYMVAQLLGAVAGAAVLYS-VTPPAVRGNL 116 ISG H+NPAVTF + ++ LLRA+ YM+AQ LGA+ G ++ + + P + Sbjct: 110 CTAGISGGHINPAVTFGLFLARKVELLRALVYMIAQCLGAICGVGLVKAFMKGPYNQFGG 169 Query: 117 ALNTLHPGVSVGQATIVEIFLTLQFVLCIFATYDERRNGRLGSV----ALAVGFSLTLGH 172 N++ G + G A EI T V +F+ D +R+ R V L +GF++ + H Sbjct: 170 GANSVALGYNKGTALGAEIIGTFVLVYTVFSATDPKRSARDSHVPILAPLPIGFAVFMVH 229 Query: 173 LFGMYYTGAGMNPARSFAPAIL---TRNFTNHWVYWVGPVIGAGLGSLLYDFLL 223 L + TG G+NPARSF A++ + + + W++WVGP IGA + + + ++L Sbjct: 230 LATIPITGTGINPARSFGAAVIFNSNKVWDDQWIFWVGPFIGAAVAAAYHQYVL 283 >2W1P-A nrPDB Length = 279 Score = 92.8 bits (229), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 59/177 (33%), Positives = 92/177 (51%), Gaps = 7/177 (3%) Query: 38 PLHVLQVALAFGLALATLVQAVGHISGAHVNPAVTFAFLVGSQMSLLRAICYMVAQLLGA 97 P ++ ++ FG + V +SG ++NPAVT A ++ + R I Q++ Sbjct: 82 PAQLIMISFGFGFGVMVGVFITYRVSGGNLNPAVTLALVLARAIPPFRGILMAFTQIVAG 141 Query: 98 VAGAAVLYSVTPPAVRGNLAL-NTLHPGVSVGQATIVEIFLTLQFVLCIFATYDERRNGR 156 +A A ++TP G +A N L G S + +E F T L + E+ Sbjct: 142 MAAAGAASAMTP----GEIAFANALGGGASRTRGLFLEAFGTAILCLTVLMLAVEKHRAT 197 Query: 157 LGSVALAVGFSLTLGHLFGMYYTGAGMNPARSFAPAILTRNFTN-HWVYWVGPVIGA 212 + +G +L + HL +YYTGAG+NPARSF PA+ R+F N HW+YW+GP++GA Sbjct: 198 WFA-PFVIGIALLIAHLICIYYTGAGLNPARSFGPAVAARSFPNYHWIYWLGPILGA 253 >2EVU-A nrPDB Length = 246 Score = 91.3 bits (225), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 75/246 (30%), Positives = 115/246 (46%), Gaps = 36/246 (14%) Query: 8 SFWRAICAEFFASLFYVFFGLG--------ASLRWAPGPLHV-----------LQVALAF 48 S + AEF + VFFG G AS +P P ++ + + LAF Sbjct: 3 SLTKRCIAEFIGTFILVFFGAGSAAVTLMIASGGTSPNPFNIGIGLLGGLGDWVAIGLAF 62 Query: 49 GLALATLVQAVGHISGAHVNPAVTFAFLVGSQMSLLRAICYMVAQLLGAVAGAAVLYSVT 108 G A+A + A+G+ISG H+NPAVT + + Y++AQLLGA G+ + Sbjct: 63 GFAIAASIYALGNISGCHINPAVTIGLWSVKKFPGREVVPYIIAQLLGAAFGSFIFLQCA 122 Query: 109 --PPAVRGNLALNTLHPGVSVGQATIVEIFLTLQFVLCIFA-TYDERRNGRLGSVALAV- 164 A G L PG+S QA + E+ T ++ I DER + + + Sbjct: 123 GIGAATVGGLGATAPFPGISYWQAMLAEVVGTFLLMITIMGIAVDERAPKGFAGIIIGLT 182 Query: 165 --GFSLTLGHLFGMYYTGAGMNPARSFAPAILTRNF--TNHW----VYWVGPVIGAGLGS 216 G TLG++ +G+ +NPAR+F P + F T+ W +Y +GP++GA L + Sbjct: 183 VAGIITTLGNI-----SGSSLNPARTFGPYLNDMIFAGTDLWNYYSIYVIGPIVGAVLAA 237 Query: 217 LLYDFL 222 L Y +L Sbjct: 238 LTYQYL 243 >2O9F-A nrPDB Length = 234 Score = 88.6 bits (218), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 71/210 (33%), Positives = 103/210 (49%), Gaps = 16/210 (7%) Query: 10 WRAICAEFFASLFYVFFGLGASLRWAPGP---LHVLQVALAFGLALATLVQAVGHISGAH 66 +R + AE F + + VF G G+++ A P + VALAFGL + T+ AVGHISG H Sbjct: 5 FRKLAAESFGTFWLVFGGSGSAVLAAGFPELGIGFAGVALAFGLTVLTMAFAVGHISGGH 64 Query: 67 VNPAVTFAFLVGSQMSLLRAICYMVAQLLGAVAGAAVLYSVTP-----PAVRGNLALNTL 121 NPAVT G + + Y++AQ++G + AA+LY + A A N Sbjct: 65 FNPAVTIGLWAGGRFPAKEVVGYVIAQVVGGIVAAALLYLIASGKTGFDAAASGFASNGY 124 Query: 122 HP----GVSVGQATIVEIFLTLQFVLCIFATYDERRNGRLGSVALAVGFSLTLGHLFGMY 177 G S+ A +VE+ L+ F+L I D + G +A+G + TL HL + Sbjct: 125 GEHSPGGYSMLSALVVELVLSAGFLLVIHGATD--KFAPAGFAPIAIGLACTLIHLISIP 182 Query: 178 YTGAGMNPARSFAPAILTRNFT--NHWVYW 205 T +NPARS A AI + W +W Sbjct: 183 VTNTSVNPARSTAVAIFQGGWALEQLWFFW 212 >3NE2-A nrPDB Length = 246 Score = 84.7 bits (208), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 60/190 (31%), Positives = 99/190 (52%), Gaps = 16/190 (8%) Query: 44 VALAFGLALATLVQAVGHISGAHVNPAVTFAFLVGSQMSLLRAICYMVAQLLGAVAGAAV 103 + +AF LA+A ++ ++G ISGAH+NPAVT A + + Y+VAQ +GA G+ + Sbjct: 59 IGMAFALAIAAVIYSLGRISGAHINPAVTIALWSIGRFPGREVVPYIVAQFIGAALGSLL 118 Query: 104 LYSVTPPAVR--GNLALNTLHPGVSVGQATIVEIFLTLQFVLCIFAT-YDERRNGRLGSV 160 + PA G L PG+ GQA + E T +L I DER + Sbjct: 119 FLACVGPAAATVGGLGATAPFPGIGYGQAILTEAIGTFLLMLVIMGVAVDERAPPGFAGL 178 Query: 161 ALAV---GFSLTLGHLFGMYYTGAGMNPARSFAP----AILTRNFTNHW-VYWVGPVIGA 212 + + G T+G++ TG+ +NPAR+F P +++ N ++ +Y +GP++GA Sbjct: 179 VIGLTVGGIITTIGNI-----TGSSLNPARTFGPYLGDSLMGINLWQYFPIYVIGPIVGA 233 Query: 213 GLGSLLYDFL 222 + LY++L Sbjct: 234 VAAAWLYNYL 243 >3LLQ-A nrPDB Length = 256 Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 73/222 (32%), Positives = 112/222 (50%), Gaps = 14/222 (6%) Query: 11 RAICAEFFASLFYVFFGLGASLRWAPGP---LHVLQVALAFGLALATLVQAVGHISGAHV 67 R + AEFF + + VF G G+++ A P + VALAFGL + T+ AVG ISG H Sbjct: 31 RKLLAEFFGTFWLVFGGCGSAVFAAAFPELGIGFTGVALAFGLTVLTMAYAVGGISGGHF 90 Query: 68 NPAVTFAFLVGSQMSLLRAICYMVAQLLGAVAGAAVLYSVTPPAVR---GNLALNTLHP- 123 NPAV+ V + + Y++AQ+ GA+ AA LY + G A N Sbjct: 91 NPAVSVGLTVAGRFPASSLVPYVIAQVAGAIVAAAALYVIATGKAGIDLGGFASNGYGEH 150 Query: 124 ---GVSVGQATIVEIFLTLQFVLCIFATYDERRNGRLGSVALAVGFSLTLGHLFGMYYTG 180 G S+ A ++EI LT F++ I + R G +A+G +LTL HL + T Sbjct: 151 SPGGYSLVSALLIEIILTAFFLIVILGSTHGRVPA--GFAPIAIGLALTLIHLISIPVTN 208 Query: 181 AGMNPARSFAPAILTRNFT--NHWVYWVGPVIGAGLGSLLYD 220 +NPARS A+ + W++W+ P++G G++++ Sbjct: 209 TSVNPARSTGQALFVGGWALQQLWLFWLAPIVGGAAGAVIWK 250 >1LDI-A nrPDB Length = 281 Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 73/267 (27%), Positives = 120/267 (44%), Gaps = 36/267 (13%) Query: 15 AEFFASLFYVFFGLG--ASLRWAPGPLHVLQVALAFGLALATLVQAVGHISGAHVNPAVT 72 AEF + +FFG+G A+L+ A ++++ +GL +A + +SGAH+NPAVT Sbjct: 13 AEFLGTGLLIFFGVGCVAALKVAGASFGQWEISVIWGLGVAMAIYLTAGVSGAHLNPAVT 72 Query: 73 FAFLVGSQMSLLRAICYMVAQLLGAVAGAAVLYSV----------TPPAVRGNLALNTL- 121 A + + + I ++V+Q+ GA AA++Y + T VRG++ L Sbjct: 73 IALWLFACFDKRKVIPFIVSQVAGAFCAAALVYGLYYNLFFDFEQTHHIVRGSVESVDLA 132 Query: 122 -------HPGVSVGQATIVEIFLTLQFVLCIFATYDERRNGRLGSVA-LAVGFSL-TLGH 172 +P ++ QA VE+ +T + I A D+ G +A L +G + +G Sbjct: 133 GTFSTYPNPHINFVQAFAVEMVITAILMGLILALTDDGNGVPRGPLAPLLIGLLIAVIGA 192 Query: 173 LFGMYYTGAGMNPARSFAPAILT-------------RNFTNHWVYWVGPVIGAGLGSLLY 219 G TG MNPAR F P + R+ V GP++GA +G+ Y Sbjct: 193 SMGP-LTGFAMNPARDFGPKVFAWLAGWGNVAFTGGRDIPYFLVPLFGPIVGAIVGAFAY 251 Query: 220 DFLLFPRLKSVSERLSILKGSRPSESN 246 L+ L + + + PSE Sbjct: 252 RKLIGRHLPCDICVVEEKETTTPSEQK 278 >3C02-A nrPDB Length = 258 Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 66/245 (26%), Positives = 106/245 (43%), Gaps = 21/245 (8%) Query: 1 MWELRSASFWRAICAEFFASLFYVFFGLGASLRWAPGPL--HVLQVALAFGLALATLVQA 58 M L S+ R EF + +F G GA+ + L ++ L +GLA+ + Sbjct: 1 MHMLFYKSYVREFIGEFLGTFVLMFLGEGATANFHTTGLSGDWYKLCLGWGLAVFFGILV 60 Query: 59 VGHISGAHVNPAVTFAFLVGSQMSLLRAICYMVAQLLGAVAGAAVLYSVTPPAVRGN--- 115 +SGAH+N AV+ ++ L + Y AQLLGA G + +Y + + + Sbjct: 61 SAKLSGAHLNLAVSIGLSSINKFDLKKIPVYFFAQLLGAFVGTSTVYGLYHGFISNSKIP 120 Query: 116 -LALNT-LHPGVSVGQATIVEIFLTLQFVLCIFATYDERRNGRLGSVALA--VGF-SLTL 170 A T +P +S+ A E+ LT +L I DE G+ + L+ VG L + Sbjct: 121 QFAWETSRNPSISLTGAFFNELILTGILLLVILVVVDENICGKFHILKLSSVVGLIILCI 180 Query: 171 GHLFGMYYTGAGMNPARS----------FAPAILTRNFTNHWVYWVGPVIGAGLGSLLYD 220 G FG TG +NP+R + T++ WV V P +G+ + YD Sbjct: 181 GITFGG-NTGFALNPSRDLGSRFLSLIAYGKDTFTKDNFYFWVPLVAPCVGSVVFCQFYD 239 Query: 221 FLLFP 225 ++ P Sbjct: 240 KVICP 244 >6F7H-A nrPDB Length = 301 Score = 51.2 bits (121), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 51/212 (24%), Positives = 88/212 (41%), Gaps = 41/212 (19%) Query: 46 LAFGLALATLVQAVGHISGAHVNPAVTFAFLVGSQMSLLRAICYMVAQLLGAVAGAAVLY 105 LA LA+ + G++SGAH+NPA + A + ++ ++ Y++ QLL A + Y Sbjct: 60 LAGSLAVTIAIYVGGNVSGAHLNPAFSLAMCIVGRLPWVKLPIYILVQLLSAFCASGATY 119 Query: 106 ---------------SVTPPAVRGNLALNTLHPGVSVGQATIVEIFLTLQFVLCIFATYD 150 +VT P ++ P +S+ + ++ T ++ + A D Sbjct: 120 VLYHDALQNYTGGNLTVTGPKETASIFATYPAPYLSLNNGFLDQVLGTGMLIVGLLAILD 179 Query: 151 ERRNG--------RLGSVALAVGFSLTLGHLFGMYYTGAGMNPARSFAPAILT------- 195 R G +G + LA+G S+ G +NPAR P + T Sbjct: 180 RRNKGVPAGLEPVVVGMLILALGLSMGAN-------CGIPLNPARDLGPRLFTYVAGWGP 232 Query: 196 RNFTNH----WVYWVGPVIGAGLGSLLYDFLL 223 F+ WV V P++GA +G+ Y L+ Sbjct: 233 EVFSAGNGWWWVPVVAPLVGATVGTATYQLLV 264 >4O23-A nrPDB Length = 384 Score = 28.5 bits (62), Expect = 3.2, Method: Compositional matrix adjust. Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 3/42 (7%) Query: 153 RNGRLGSVALAVGFSLTLGHLFGMYYTGAGMNPARSFAPAIL 194 +NGR GS++ + GH+ Y +NP +FAPA+L Sbjct: 179 KNGRRGSLSGNLTVKGKQGHI---AYPHLAINPVHTFAPALL 217 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 1YMG-A nrPDB 319 6e-88 4OJ2-X nrPDB 311 2e-85 1J4N-A nrPDB 301 1e-82 1IH5-A nrPDB 301 3e-82 3IYZ-A nrPDB 297 4e-81 2ZZ9-A nrPDB 295 1e-80 4NEF-A nrPDB 279 6e-76 3D9S-A nrPDB 275 2e-74 3M9I-A nrPDB 261 3e-70 3GD8-A nrPDB 253 4e-68 3CLL-A nrPDB 217 5e-57 1LDI-A nrPDB 201 3e-52 3C02-A nrPDB 189 1e-48 5I32-A nrPDB 178 2e-45 2EVU-A nrPDB 174 3e-44 3LLQ-A nrPDB 165 2e-41 2W1P-A nrPDB 164 5e-41 3NE2-A nrPDB 162 1e-40 2O9F-A nrPDB 162 2e-40 6F7H-A nrPDB 160 4e-40 Sequences not found previously or not previously below threshold: 5Z7D-A nrPDB 30 1.2 5YZW-A nrPDB 30 1.2 3DZU-A nrPDB 30 1.4 CONVERGED! >1YMG-A nrPDB Length = 263 Score = 319 bits (818), Expect = 6e-88, Method: Composition-based stats. Identities = 263/263 (100%), Positives = 263/263 (100%) Query: 1 MWELRSASFWRAICAEFFASLFYVFFGLGASLRWAPGPLHVLQVALAFGLALATLVQAVG 60 MWELRSASFWRAICAEFFASLFYVFFGLGASLRWAPGPLHVLQVALAFGLALATLVQAVG Sbjct: 1 MWELRSASFWRAICAEFFASLFYVFFGLGASLRWAPGPLHVLQVALAFGLALATLVQAVG 60 Query: 61 HISGAHVNPAVTFAFLVGSQMSLLRAICYMVAQLLGAVAGAAVLYSVTPPAVRGNLALNT 120 HISGAHVNPAVTFAFLVGSQMSLLRAICYMVAQLLGAVAGAAVLYSVTPPAVRGNLALNT Sbjct: 61 HISGAHVNPAVTFAFLVGSQMSLLRAICYMVAQLLGAVAGAAVLYSVTPPAVRGNLALNT 120 Query: 121 LHPGVSVGQATIVEIFLTLQFVLCIFATYDERRNGRLGSVALAVGFSLTLGHLFGMYYTG 180 LHPGVSVGQATIVEIFLTLQFVLCIFATYDERRNGRLGSVALAVGFSLTLGHLFGMYYTG Sbjct: 121 LHPGVSVGQATIVEIFLTLQFVLCIFATYDERRNGRLGSVALAVGFSLTLGHLFGMYYTG 180 Query: 181 AGMNPARSFAPAILTRNFTNHWVYWVGPVIGAGLGSLLYDFLLFPRLKSVSERLSILKGS 240 AGMNPARSFAPAILTRNFTNHWVYWVGPVIGAGLGSLLYDFLLFPRLKSVSERLSILKGS Sbjct: 181 AGMNPARSFAPAILTRNFTNHWVYWVGPVIGAGLGSLLYDFLLFPRLKSVSERLSILKGS 240 Query: 241 RPSESNGQPEVTGEPVELKTQAL 263 RPSESNGQPEVTGEPVELKTQAL Sbjct: 241 RPSESNGQPEVTGEPVELKTQAL 263 >4OJ2-X nrPDB Length = 274 Score = 311 bits (797), Expect = 2e-85, Method: Composition-based stats. Identities = 153/261 (58%), Positives = 198/261 (75%), Gaps = 1/261 (0%) Query: 1 MWELRSASFWRAICAEFFASLFYVFFGLGASLRWAPGPLHVLQVALAFGLALATLVQAVG 60 MWELRS +F RA+ AEF A+L +VFFGLG++L W VLQ+A+AFGL + TLVQA+G Sbjct: 4 MWELRSIAFSRAVFAEFLATLLFVFFGLGSALNWPQALPSVLQIAMAFGLGIGTLVQALG 63 Query: 61 HISGAHVNPAVTFAFLVGSQMSLLRAICYMVAQLLGAVAGAAVLYSVTPPAVRGNLALNT 120 HISGAH+NPAVT A LVG +S+LRA Y+ AQLLGAVAGAA+L+ +TP +RG+LA+N Sbjct: 64 HISGAHINPAVTVACLVGCHVSVLRAAFYVAAQLLGAVAGAALLHEITPADIRGDLAVNA 123 Query: 121 LHPGVSVGQATIVEIFLTLQFVLCIFATYDERRNGRLGSVALAVGFSLTLGHLFGMYYTG 180 L + GQA VE+FLTLQ VLCIFA+ DERR G+ AL++GFS+ LGHL G++YTG Sbjct: 124 LSNSTTAGQAVTVELFLTLQLVLCIFASTDERRGENPGTPALSIGFSVALGHLLGIHYTG 183 Query: 181 AGMNPARSFAPAILTRNFTNHWVYWVGPVIGAGLGSLLYDFLLFPRLKSVSERLSILKGS 240 MNPARS APA++T F +HWV+W+GP++GA LGSLLY+++LFP KS+SERL++LKG Sbjct: 184 CSMNPARSLAPAVVTGKFDDHWVFWIGPLVGAILGSLLYNYVLFPPAKSLSERLAVLKGL 243 Query: 241 RPSESNGQPEV-TGEPVELKT 260 P + EV + VEL + Sbjct: 244 EPDTDWEEREVRRRQAVELHS 264 >1J4N-A nrPDB Length = 271 Score = 301 bits (772), Expect = 1e-82, Method: Composition-based stats. Identities = 118/268 (44%), Positives = 169/268 (63%), Gaps = 9/268 (3%) Query: 3 ELRSASFWRAICAEFFASLFYVFFGLGASLRWA---------PGPLHVLQVALAFGLALA 53 E + FWRA+ AEF A + ++F +G++L + ++V+LAFGL++A Sbjct: 4 EFKKKLFWRAVVAEFLAMILFIFISIGSALGFHYPIKSNQTTGAVQDNVKVSLAFGLSIA 63 Query: 54 TLVQAVGHISGAHVNPAVTFAFLVGSQMSLLRAICYMVAQLLGAVAGAAVLYSVTPPAVR 113 TL Q+VGHISGAH+NPAVT L+ Q+S+LRAI Y++AQ +GA+ A+L +T Sbjct: 64 TLAQSVGHISGAHLNPAVTLGLLLSCQISVLRAIMYIIAQCVGAIVATAILSGITSSLPD 123 Query: 114 GNLALNTLHPGVSVGQATIVEIFLTLQFVLCIFATYDERRNGRLGSVALAVGFSLTLGHL 173 +L LN L PGV+ GQ +EI TLQ VLC+ AT D RR GS LA+GFS+ LGHL Sbjct: 124 NSLGLNALAPGVNSGQGLGIEIIGTLQLVLCVLATTDRRRRDLGGSGPLAIGFSVALGHL 183 Query: 174 FGMYYTGAGMNPARSFAPAILTRNFTNHWVYWVGPVIGAGLGSLLYDFLLFPRLKSVSER 233 + YTG G+NPARSF +++T NF +HW++WVGP IGA L L+YDF+L PR +++R Sbjct: 184 LAIDYTGCGINPARSFGSSVITHNFQDHWIFWVGPFIGAALAVLIYDFILAPRSSDLTDR 243 Query: 234 LSILKGSRPSESNGQPEVTGEPVELKTQ 261 + + + E + + VE+K + Sbjct: 244 VKVWTSGQVEEYDLDADDINSRVEMKPK 271 >1IH5-A nrPDB Length = 269 Score = 301 bits (770), Expect = 3e-82, Method: Composition-based stats. Identities = 115/266 (43%), Positives = 165/266 (62%), Gaps = 7/266 (2%) Query: 3 ELRSASFWRAICAEFFASLFYVFFGLGASLRW-------APGPLHVLQVALAFGLALATL 55 E + FWRA+ AEF A+ +VF +G++L + ++V+LAFGL++ATL Sbjct: 4 EFKKKLFWRAVVAEFLATTLFVFISIGSALGFKYPVGNNQTAVQDNVKVSLAFGLSIATL 63 Query: 56 VQAVGHISGAHVNPAVTFAFLVGSQMSLLRAICYMVAQLLGAVAGAAVLYSVTPPAVRGN 115 Q+VGHISGAH+NPAVT L+ Q+S+ RA+ Y++AQ +GA+ A+L +T + Sbjct: 64 AQSVGHISGAHLNPAVTLGLLLSCQISIFRALMYIIAQCVGAIVATAILSGITSSLTGNS 123 Query: 116 LALNTLHPGVSVGQATIVEIFLTLQFVLCIFATYDERRNGRLGSVALAVGFSLTLGHLFG 175 L N L GV+ GQ +EI TLQ VLC+ AT D RR GS LA+G S+ LGHL Sbjct: 124 LGRNDLADGVNSGQGLGIEIIGTLQLVLCVLATTDRRRRDLGGSAPLAIGLSVALGHLLA 183 Query: 176 MYYTGAGMNPARSFAPAILTRNFTNHWVYWVGPVIGAGLGSLLYDFLLFPRLKSVSERLS 235 + YTG G+NPARSF A++T NF+NHW++WVGP IG L L+YDF+L PR +++R+ Sbjct: 184 IDYTGCGINPARSFGSAVITHNFSNHWIFWVGPFIGGALAVLIYDFILAPRSSDLTDRVK 243 Query: 236 ILKGSRPSESNGQPEVTGEPVELKTQ 261 + + E + + VE+K + Sbjct: 244 VWTSGQVEEYDLDADDINSRVEMKPK 269 >3IYZ-A nrPDB Length = 340 Score = 297 bits (760), Expect = 4e-81, Method: Composition-based stats. Identities = 117/266 (43%), Positives = 173/266 (65%), Gaps = 11/266 (4%) Query: 6 SASFWRAICAEFFASLFYVFFGLGASLRWA----PGPLHVLQVALAFGLALATLVQAVGH 61 + +FW+A+ AEF A L +V +G+++ W P P+ ++ ++L FGL++AT+VQ GH Sbjct: 48 TQAFWKAVTAEFLAMLIFVLLSVGSTINWGGSENPLPVDMVLISLCFGLSIATMVQCFGH 107 Query: 62 ISGAHVNPAVTFAFLVGSQMSLLRAICYMVAQLLGAVAGAAVLYSVTPPAVRGNLALNTL 121 ISG H+NPAVT A + ++S+ +++ Y+ AQ LGA+ GA +LY VTPP+V G L + T+ Sbjct: 108 ISGGHINPAVTVAMVCTRKISIAKSVFYITAQCLGAIIGAGILYLVTPPSVVGGLGVTTV 167 Query: 122 HPGVSVGQATIVEIFLTLQFVLCIFATYDERRNGRLGSVALAVGFSLTLGHLFGMYYTGA 181 H ++ G +VE+ +T Q V IFA+ D++R GSVALA+GFS+ +GHLF + YTGA Sbjct: 168 HGNLTAGHGLLVELIITFQLVFTIFASCDDKRTDVTGSVALAIGFSVAIGHLFAINYTGA 227 Query: 182 GMNPARSFAPAILTRNFTNHWVYWVGPVIGAGLGSLLYDFLLFP------RLKSV-SERL 234 MNPARSF PA++ N+ NHW+YWVGP+IGA L LY+++ P RLK S+ Sbjct: 228 SMNPARSFGPAVIMGNWENHWIYWVGPIIGAVLAGALYEYVFCPDVELKRRLKEAFSKAA 287 Query: 235 SILKGSRPSESNGQPEVTGEPVELKT 260 KGS + + +V E + LK Sbjct: 288 QQTKGSYMEVEDNRSQVETEDLILKP 313 >2ZZ9-A nrPDB Length = 301 Score = 295 bits (756), Expect = 1e-80, Method: Composition-based stats. Identities = 117/266 (43%), Positives = 173/266 (65%), Gaps = 11/266 (4%) Query: 6 SASFWRAICAEFFASLFYVFFGLGASLRWA----PGPLHVLQVALAFGLALATLVQAVGH 61 + +FW+A+ AEF A L +V +G+++ W P P+ ++ ++L FGL++AT+VQ GH Sbjct: 9 TQAFWKAVTAEFLAMLIFVLLSVGSTINWGGSENPLPVDMVLISLCFGLSIATMVQCFGH 68 Query: 62 ISGAHVNPAVTFAFLVGSQMSLLRAICYMVAQLLGAVAGAAVLYSVTPPAVRGNLALNTL 121 ISG H+NPAVT A + ++S+ +++ Y+ AQ LGA+ GA +LY VTPP+V G L + T+ Sbjct: 69 ISGGHINPAVTVAMVCTRKISIAKSVFYITAQCLGAIIGAGILYLVTPPSVVGGLGVTTV 128 Query: 122 HPGVSVGQATIVEIFLTLQFVLCIFATYDERRNGRLGSVALAVGFSLTLGHLFGMYYTGA 181 H ++ G +VE+ +T Q V IFA+ D++R GSVALA+GFS+ +GHLF + YTGA Sbjct: 129 HGNLTAGHGLLVELIITFQLVFTIFASCDDKRTDVTGSVALAIGFSVAIGHLFAINYTGA 188 Query: 182 GMNPARSFAPAILTRNFTNHWVYWVGPVIGAGLGSLLYDFLLFP------RLKSV-SERL 234 MNPARSF PA++ N+ NHW+YWVGP+IGA L LY+++ P RLK S+ Sbjct: 189 SMNPARSFGPAVIMGNWENHWIYWVGPIIGAVLAGALYEYVFCPDVELKRRLKEAFSKAA 248 Query: 235 SILKGSRPSESNGQPEVTGEPVELKT 260 KGS + + +V E + LK Sbjct: 249 QQTKGSYMEVEDNRSQVETEDLILKP 274 >4NEF-A nrPDB Length = 242 Score = 279 bits (715), Expect = 6e-76, Method: Composition-based stats. Identities = 146/240 (60%), Positives = 188/240 (78%) Query: 3 ELRSASFWRAICAEFFASLFYVFFGLGASLRWAPGPLHVLQVALAFGLALATLVQAVGHI 62 ELRS +F RA+ AEF A+L +VFFGLG++L W VLQ+A+AFGL + TLVQA+GHI Sbjct: 3 ELRSIAFSRAVFAEFLATLLFVFFGLGSALNWPQALPSVLQIAMAFGLGIGTLVQALGHI 62 Query: 63 SGAHVNPAVTFAFLVGSQMSLLRAICYMVAQLLGAVAGAAVLYSVTPPAVRGNLALNTLH 122 SGAH+NPAVT A LVG +S+LRA Y+ AQLLGAVAGAA+L+ +TP +RG+LA+N L Sbjct: 63 SGAHINPAVTVACLVGCHVSVLRAAFYVAAQLLGAVAGAALLHEITPADIRGDLAVNALS 122 Query: 123 PGVSVGQATIVEIFLTLQFVLCIFATYDERRNGRLGSVALAVGFSLTLGHLFGMYYTGAG 182 + GQA VE+FLTLQ VLCIFA+ DERR G+ AL++GFS+ LGHL G++YTG Sbjct: 123 NSTTAGQAVTVELFLTLQLVLCIFASTDERRGENPGTPALSIGFSVALGHLLGIHYTGCS 182 Query: 183 MNPARSFAPAILTRNFTNHWVYWVGPVIGAGLGSLLYDFLLFPRLKSVSERLSILKGSRP 242 MNPARS APA++T F +HWV+W+GP++GA LGSLLY+++LFP KS+SERL++LKG P Sbjct: 183 MNPARSLAPAVVTGKFDDHWVFWIGPLVGAILGSLLYNYVLFPPAKSLSERLAVLKGLEP 242 >3D9S-A nrPDB Length = 266 Score = 275 bits (703), Expect = 2e-74, Method: Composition-based stats. Identities = 139/262 (53%), Positives = 189/262 (72%), Gaps = 3/262 (1%) Query: 3 ELRSASFWRAICAEFFASLFYVFFGLGASLRWAPGPLHVLQVALAFGLALATLVQAVGHI 62 E+ S +F +A+ AEF A+L +VFFGLG++L+W +LQ+ALAFGLA+ TL QA+G + Sbjct: 5 EVCSVAFLKAVFAEFLATLIFVFFGLGSALKWPSALPTILQIALAFGLAIGTLAQALGPV 64 Query: 63 SGAHVNPAVTFAFLVGSQMSLLRAICYMVAQLLGAVAGAAVLYSVTPPAVRGNLALNTLH 122 SG H+NPA+T A LVG+Q+SLLRA Y+ AQL+GA+AGA +LY V P RGNLA+N L+ Sbjct: 65 SGGHINPAITLALLVGNQISLLRAFFYVAAQLVGAIAGAGILYGVAPLNARGNLAVNALN 124 Query: 123 PGVSVGQATIVEIFLTLQFVLCIFATYDERRNGRLGSVALAVGFSLTLGHLFGMYYTGAG 182 + GQA +VE+ LT Q LCIFA+ D RR +GS AL++G S+TLGHL G+Y+TG Sbjct: 125 NNTTQGQAMVVELILTFQLALCIFASTDSRRTSPVGSPALSIGLSVTLGHLVGIYFTGCS 184 Query: 183 MNPARSFAPAILTRNF-TNHWVYWVGPVIGAGLGSLLYDFLLFPRLKSVSERLSILKGS- 240 MNPARSF PA++ F HWV+WVGP++GA L ++LY +LLFP S+SER++I+KG+ Sbjct: 185 MNPARSFGPAVVMNRFSPAHWVFWVGPIVGAVLAAILYFYLLFPNSLSLSERVAIIKGTY 244 Query: 241 RPSESN-GQPEVTGEPVELKTQ 261 P E Q E + +EL T+ Sbjct: 245 EPDEDWEEQREERKKTMELTTR 266 >3M9I-A nrPDB Length = 220 Score = 261 bits (666), Expect = 3e-70, Method: Composition-based stats. Identities = 217/220 (98%), Positives = 219/220 (99%) Query: 7 ASFWRAICAEFFASLFYVFFGLGASLRWAPGPLHVLQVALAFGLALATLVQAVGHISGAH 66 ASFWRAI AEFFA+LFYVFFGLGASLRWAPGPLHVLQVALAFGLALATLVQAVGHISGAH Sbjct: 1 ASFWRAIFAEFFATLFYVFFGLGASLRWAPGPLHVLQVALAFGLALATLVQAVGHISGAH 60 Query: 67 VNPAVTFAFLVGSQMSLLRAICYMVAQLLGAVAGAAVLYSVTPPAVRGNLALNTLHPGVS 126 VNPAVTFAFLVGSQMSLLRAICY+VAQLLGAVAGAAVLYSVTPPAVRGNLALNTLHPGVS Sbjct: 61 VNPAVTFAFLVGSQMSLLRAICYVVAQLLGAVAGAAVLYSVTPPAVRGNLALNTLHPGVS 120 Query: 127 VGQATIVEIFLTLQFVLCIFATYDERRNGRLGSVALAVGFSLTLGHLFGMYYTGAGMNPA 186 VGQATIVEIFLTLQFVLCIFATYDERRNGRLGSVALAVGFSLTLGHLFGMYYTGAGMNPA Sbjct: 121 VGQATIVEIFLTLQFVLCIFATYDERRNGRLGSVALAVGFSLTLGHLFGMYYTGAGMNPA 180 Query: 187 RSFAPAILTRNFTNHWVYWVGPVIGAGLGSLLYDFLLFPR 226 RSFAPAILTRNFTNHWVYWVGPVIGAGLGSLLYDFLLFPR Sbjct: 181 RSFAPAILTRNFTNHWVYWVGPVIGAGLGSLLYDFLLFPR 220 >3GD8-A nrPDB Length = 223 Score = 253 bits (647), Expect = 4e-68, Method: Composition-based stats. Identities = 105/223 (47%), Positives = 154/223 (69%), Gaps = 4/223 (1%) Query: 7 ASFWRAICAEFFASLFYVFFGLGASLRWA----PGPLHVLQVALAFGLALATLVQAVGHI 62 +FW+A+ AEF A L +V LG+++ W P P+ ++ ++L FGL++AT+VQ GHI Sbjct: 1 QAFWKAVTAEFLAMLIFVLLSLGSTINWGGTEKPLPVDMVLISLCFGLSIATMVQCFGHI 60 Query: 63 SGAHVNPAVTFAFLVGSQMSLLRAICYMVAQLLGAVAGAAVLYSVTPPAVRGNLALNTLH 122 SG H+NPAVT A + ++S+ +++ Y+ AQ LGA+ GA +LY VTPP+V G L + +H Sbjct: 61 SGGHINPAVTVAMVCTRKISIAKSVFYIAAQCLGAIIGAGILYLVTPPSVVGGLGVTMVH 120 Query: 123 PGVSVGQATIVEIFLTLQFVLCIFATYDERRNGRLGSVALAVGFSLTLGHLFGMYYTGAG 182 ++ G +VE+ +T Q V IFA+ D +R GS+ALA+GFS+ +GHLF + YTGA Sbjct: 121 GNLTAGHGLLVELIITFQLVFTIFASCDSKRTDVTGSIALAIGFSVAIGHLFAINYTGAS 180 Query: 183 MNPARSFAPAILTRNFTNHWVYWVGPVIGAGLGSLLYDFLLFP 225 MNPARSF PA++ N+ NHW+YWVGP+IGA L LY+++ P Sbjct: 181 MNPARSFGPAVIMGNWENHWIYWVGPIIGAVLAGGLYEYVFCP 223 >3CLL-A nrPDB Length = 300 Score = 217 bits (552), Expect = 5e-57, Method: Composition-based stats. Identities = 80/234 (34%), Positives = 129/234 (55%), Gaps = 13/234 (5%) Query: 3 ELRSASFWRAICAEFFASLFYVFFGLGASLRWAP-----GPLHVLQVALAFGLALATLVQ 57 EL+ SFWRA AEF A+L +++ + + + G + +L +A AFG + LV Sbjct: 50 ELKLWSFWRAAIAEFIATLLFLYITVATVIGHSKETVVCGSVGLLGIAWAFGGMIFVLVY 109 Query: 58 AVGHISGAHVNPAVTFAFLVGSQMSLLRAICYMVAQLLGAVAGAAVLYS-VTPPAVRGNL 116 ISG H+NPAVTF + ++ LLRA+ YM+AQ LGA+ G ++ + + P + Sbjct: 110 CTAGISGGHINPAVTFGLFLARKVELLRALVYMIAQCLGAICGVGLVKAFMKGPYNQFGG 169 Query: 117 ALNTLHPGVSVGQATIVEIFLTLQFVLCIFATYDERRNGRLGSV----ALAVGFSLTLGH 172 N++ G + G A EI T V +F+ D +R+ R V L +GF++ + H Sbjct: 170 GANSVALGYNKGTALGAEIIGTFVLVYTVFSATDPKRSARDSHVPILAPLPIGFAVFMVH 229 Query: 173 LFGMYYTGAGMNPARSFAPAIL---TRNFTNHWVYWVGPVIGAGLGSLLYDFLL 223 L + TG G+NPARSF A++ + + + W++WVGP IGA + + + ++L Sbjct: 230 LATIPITGTGINPARSFGAAVIFNSNKVWDDQWIFWVGPFIGAAVAAAYHQYVL 283 >1LDI-A nrPDB Length = 281 Score = 201 bits (511), Expect = 3e-52, Method: Composition-based stats. Identities = 69/268 (25%), Positives = 116/268 (43%), Gaps = 34/268 (12%) Query: 13 ICAEFFASLFYVFFGLG--ASLRWAPGPLHVLQVALAFGLALATLVQAVGHISGAHVNPA 70 AEF + +FFG+G A+L+ A ++++ +GL +A + +SGAH+NPA Sbjct: 11 CIAEFLGTGLLIFFGVGCVAALKVAGASFGQWEISVIWGLGVAMAIYLTAGVSGAHLNPA 70 Query: 71 VTFAFLVGSQMSLLRAICYMVAQLLGAVAGAAVLYSV----------TPPAVRGNL---- 116 VT A + + + I ++V+Q+ GA AA++Y + T VRG++ Sbjct: 71 VTIALWLFACFDKRKVIPFIVSQVAGAFCAAALVYGLYYNLFFDFEQTHHIVRGSVESVD 130 Query: 117 ----ALNTLHPGVSVGQATIVEIFLTLQFVLCIFATYDERRNGRLGSV-ALAVGFSLTLG 171 +P ++ QA VE+ +T + I A D+ G + L +G + + Sbjct: 131 LAGTFSTYPNPHINFVQAFAVEMVITAILMGLILALTDDGNGVPRGPLAPLLIGLLIAVI 190 Query: 172 HLFGMYYTGAGMNPARSFAPAILT-------------RNFTNHWVYWVGPVIGAGLGSLL 218 TG MNPAR F P + R+ V GP++GA +G+ Sbjct: 191 GASMGPLTGFAMNPARDFGPKVFAWLAGWGNVAFTGGRDIPYFLVPLFGPIVGAIVGAFA 250 Query: 219 YDFLLFPRLKSVSERLSILKGSRPSESN 246 Y L+ L + + + PSE Sbjct: 251 YRKLIGRHLPCDICVVEEKETTTPSEQK 278 >3C02-A nrPDB Length = 258 Score = 189 bits (480), Expect = 1e-48, Method: Composition-based stats. Identities = 61/244 (25%), Positives = 103/244 (42%), Gaps = 19/244 (7%) Query: 1 MWELRSASFWRAICAEFFASLFYVFFGLGASLRWAPGPL--HVLQVALAFGLALATLVQA 58 M L S+ R EF + +F G GA+ + L ++ L +GLA+ + Sbjct: 1 MHMLFYKSYVREFIGEFLGTFVLMFLGEGATANFHTTGLSGDWYKLCLGWGLAVFFGILV 60 Query: 59 VGHISGAHVNPAVTFAFLVGSQMSLLRAICYMVAQLLGAVAGAAVLYSVTPPAVRGN--- 115 +SGAH+N AV+ ++ L + Y AQLLGA G + +Y + + + Sbjct: 61 SAKLSGAHLNLAVSIGLSSINKFDLKKIPVYFFAQLLGAFVGTSTVYGLYHGFISNSKIP 120 Query: 116 -LAL-NTLHPGVSVGQATIVEIFLTLQFVLCIFATYDERRNGRLGSVALA--VGFSLTLG 171 A + +P +S+ A E+ LT +L I DE G+ + L+ VG + Sbjct: 121 QFAWETSRNPSISLTGAFFNELILTGILLLVILVVVDENICGKFHILKLSSVVGLIILCI 180 Query: 172 HLFGMYYTGAGMNPARS----------FAPAILTRNFTNHWVYWVGPVIGAGLGSLLYDF 221 + TG +NP+R + T++ WV V P +G+ + YD Sbjct: 181 GITFGGNTGFALNPSRDLGSRFLSLIAYGKDTFTKDNFYFWVPLVAPCVGSVVFCQFYDK 240 Query: 222 LLFP 225 ++ P Sbjct: 241 VICP 244 >5I32-A nrPDB Length = 275 Score = 178 bits (452), Expect = 2e-45, Method: Composition-based stats. Identities = 80/227 (35%), Positives = 127/227 (55%), Gaps = 11/227 (4%) Query: 5 RSASFWRAICAEFFASLFYVFFGLGASLRWAPGP-------LHVLQVALAFGLALATLVQ 57 S + RA AEF ++L +VF G+G+++ +A ++ +A+ G AL V Sbjct: 38 FSLASLRAYLAEFISTLLFVFAGVGSAIAYAKLTSDAALDTPGLVAIAVCHGFALFVAVA 97 Query: 58 AVGHISGAHVNPAVTFAFLVGSQMSLLRAICYMVAQLLGAVAGAAVLYSVTPPAVRGNLA 117 +ISG HVNPAVTF VG Q++++ + Y +AQLLG+ A +L VT + Sbjct: 98 IGANISGGHVNPAVTFGLAVGGQITVITGVFYWIAQLLGSTAACFLLKYVTGGLA---VP 154 Query: 118 LNTLHPGVSVGQATIVEIFLTLQFVLCIFATYDERRNGRLGSV-ALAVGFSLTLGHLFGM 176 +++ G+ + ++EI +T V ++AT + + G LG++ LA+G + L Sbjct: 155 THSVAAGLGSIEGVVMEIIITFALVYTVYATAADPKKGSLGTIAPLAIGLIVGANILAAG 214 Query: 177 YYTGAGMNPARSFAPAILTRNFTNHWVYWVGPVIGAGLGSLLYDFLL 223 ++G MNPARSF PA+ +F+ HWVYWVGP+IG GL L+Y + Sbjct: 215 PFSGGSMNPARSFGPAVAAGDFSGHWVYWVGPLIGGGLAGLIYGNVF 261 >2EVU-A nrPDB Length = 246 Score = 174 bits (442), Expect = 3e-44, Method: Composition-based stats. Identities = 69/243 (28%), Positives = 109/243 (44%), Gaps = 28/243 (11%) Query: 7 ASFWRAICAEFFASLFYVFFGLGASL--------RWAPGPL-----------HVLQVALA 47 S + AEF + VFFG G++ +P P + + LA Sbjct: 2 VSLTKRCIAEFIGTFILVFFGAGSAAVTLMIASGGTSPNPFNIGIGLLGGLGDWVAIGLA 61 Query: 48 FGLALATLVQAVGHISGAHVNPAVTFAFLVGSQMSLLRAICYMVAQLLGAVAGAAVLYSV 107 FG A+A + A+G+ISG H+NPAVT + + Y++AQLLGA G+ + Sbjct: 62 FGFAIAASIYALGNISGCHINPAVTIGLWSVKKFPGREVVPYIIAQLLGAAFGSFIFLQC 121 Query: 108 T--PPAVRGNLALNTLHPGVSVGQATIVEIFLTLQFVLCIFATYDERRNGRLGSVALAVG 165 A G L PG+S QA + E+ T ++ I + R G + +G Sbjct: 122 AGIGAATVGGLGATAPFPGISYWQAMLAEVVGTFLLMITIMGIAVDER-APKGFAGIIIG 180 Query: 166 FSLTLGHLFGMYYTGAGMNPARSFAPAILTRNF--TNHW----VYWVGPVIGAGLGSLLY 219 ++ +G+ +NPAR+F P + F T+ W +Y +GP++GA L +L Y Sbjct: 181 LTVAGIITTLGNISGSSLNPARTFGPYLNDMIFAGTDLWNYYSIYVIGPIVGAVLAALTY 240 Query: 220 DFL 222 +L Sbjct: 241 QYL 243 Score = 44.2 bits (103), Expect = 5e-05, Method: Composition-based stats. Identities = 25/108 (23%), Positives = 48/108 (44%), Gaps = 8/108 (7%) Query: 7 ASFWRAICAEFFASLFYVFFGLGASLRWAPGPLHVLQVALAFGLALATLVQAVGHISGAH 66 S+W+A+ AE + + +G ++ P + + GL +A ++ +G+ISG+ Sbjct: 141 ISYWQAMLAEVVGTFLLMITIMGIAVD-ERAPKGFAGIII--GLTVAGIITTLGNISGSS 197 Query: 67 VNPAVTFA-----FLVGSQMSLLRAICYMVAQLLGAVAGAAVLYSVTP 109 +NPA TF + Y++ ++GAV A +T Sbjct: 198 LNPARTFGPYLNDMIFAGTDLWNYYSIYVIGPIVGAVLAALTYQYLTS 245 >3LLQ-A nrPDB Length = 256 Score = 165 bits (418), Expect = 2e-41, Method: Composition-based stats. Identities = 74/230 (32%), Positives = 114/230 (49%), Gaps = 14/230 (6%) Query: 4 LRSASFWRAICAEFFASLFYVFFGLGASLRWAPGP---LHVLQVALAFGLALATLVQAVG 60 +S R + AEFF + + VF G G+++ A P + VALAFGL + T+ AVG Sbjct: 24 FQSYVMGRKLLAEFFGTFWLVFGGCGSAVFAAAFPELGIGFTGVALAFGLTVLTMAYAVG 83 Query: 61 HISGAHVNPAVTFAFLVGSQMSLLRAICYMVAQLLGAVAGAAVLYSVTPPAVR---GNLA 117 ISG H NPAV+ V + + Y++AQ+ GA+ AA LY + G A Sbjct: 84 GISGGHFNPAVSVGLTVAGRFPASSLVPYVIAQVAGAIVAAAALYVIATGKAGIDLGGFA 143 Query: 118 LNTLH----PGVSVGQATIVEIFLTLQFVLCIFATYDERRNGRLGSVALAVGFSLTLGHL 173 N G S+ A ++EI LT F++ I + R G +A+G +LTL HL Sbjct: 144 SNGYGEHSPGGYSLVSALLIEIILTAFFLIVILGSTHGRVPA--GFAPIAIGLALTLIHL 201 Query: 174 FGMYYTGAGMNPARSFAPAILTRNFT--NHWVYWVGPVIGAGLGSLLYDF 221 + T +NPARS A+ + W++W+ P++G G++++ Sbjct: 202 ISIPVTNTSVNPARSTGQALFVGGWALQQLWLFWLAPIVGGAAGAVIWKL 251 Score = 32.7 bits (73), Expect = 0.15, Method: Composition-based stats. Identities = 21/93 (22%), Positives = 31/93 (33%), Gaps = 5/93 (5%) Query: 119 NTLHPGVSVGQATIVEIFLTLQFVLC-----IFATYDERRNGRLGSVALAVGFSLTLGHL 173 N +G+ + E F T V +FA VALA G ++ Sbjct: 21 NLYFQSYVMGRKLLAEFFGTFWLVFGGCGSAVFAAAFPELGIGFTGVALAFGLTVLTMAY 80 Query: 174 FGMYYTGAGMNPARSFAPAILTRNFTNHWVYWV 206 +G NPA S + R + V +V Sbjct: 81 AVGGISGGHFNPAVSVGLTVAGRFPASSLVPYV 113 >2W1P-A nrPDB Length = 279 Score = 164 bits (414), Expect = 5e-41, Method: Composition-based stats. Identities = 64/219 (29%), Positives = 104/219 (47%), Gaps = 14/219 (6%) Query: 12 AICAEFFASLFYVF--FGLGASLRWAP-------GPLHVLQVALAFGLALATLVQAVGHI 62 A+ EF + +++ F + AP P ++ ++ FG + V + Sbjct: 47 AMSGEFVGTFLFLWSAFVIAQIANQAPETPDGGSNPAQLIMISFGFGFGVMVGVFITYRV 106 Query: 63 SGAHVNPAVTFAFLVGSQMSLLRAICYMVAQLLGAVAGAAVLYSVTPPAVRGNLALNTLH 122 SG ++NPAVT A ++ + R I Q++ +A A ++TP + N L Sbjct: 107 SGGNLNPAVTLALVLARAIPPFRGILMAFTQIVAGMAAAGAASAMTPGEIA---FANALG 163 Query: 123 PGVSVGQATIVEIFLTLQFVLCIFATYDERRNGRLGSVALAVGFSLTLGHLFGMYYTGAG 182 G S + +E F T L + E+ +G +L + HL +YYTGAG Sbjct: 164 GGASRTRGLFLEAFGTAILCLTVLMLAVEKHRATW-FAPFVIGIALLIAHLICIYYTGAG 222 Query: 183 MNPARSFAPAILTRNFTN-HWVYWVGPVIGAGLGSLLYD 220 +NPARSF PA+ R+F N HW+YW+GP++GA L ++ Sbjct: 223 LNPARSFGPAVAARSFPNYHWIYWLGPILGAFLAYSIWQ 261 >3NE2-A nrPDB Length = 246 Score = 162 bits (411), Expect = 1e-40, Method: Composition-based stats. Identities = 66/243 (27%), Positives = 106/243 (43%), Gaps = 27/243 (11%) Query: 6 SASFWRAICAEFFASLFYVFFGLGASL-------------------RWAPGPLHVLQVAL 46 + + + AE + VFFG GA++ G + + Sbjct: 2 TMTLAKRFTAEVVGTFILVFFGPGAAVITLMIANGADKPNEFNIGIGALGGLGDWFAIGM 61 Query: 47 AFGLALATLVQAVGHISGAHVNPAVTFAFLVGSQMSLLRAICYMVAQLLGAVAGAAVLYS 106 AF LA+A ++ ++G ISGAH+NPAVT A + + Y+VAQ +GA G+ + + Sbjct: 62 AFALAIAAVIYSLGRISGAHINPAVTIALWSIGRFPGREVVPYIVAQFIGAALGSLLFLA 121 Query: 107 VTPPAVR--GNLALNTLHPGVSVGQATIVEIFLTLQFVLCIFATYDERRNGRLGSVALAV 164 PA G L PG+ GQA + E T +L I + R G L + Sbjct: 122 CVGPAAATVGGLGATAPFPGIGYGQAILTEAIGTFLLMLVIMGVAVDER-APPGFAGLVI 180 Query: 165 GFSLTLGHLFGMYYTGAGMNPARSFAPAILT-----RNFTNHWVYWVGPVIGAGLGSLLY 219 G ++ TG+ +NPAR+F P + + +Y +GP++GA + LY Sbjct: 181 GLTVGGIITTIGNITGSSLNPARTFGPYLGDSLMGINLWQYFPIYVIGPIVGAVAAAWLY 240 Query: 220 DFL 222 ++L Sbjct: 241 NYL 243 Score = 39.6 bits (91), Expect = 0.001, Method: Composition-based stats. Identities = 23/104 (22%), Positives = 47/104 (45%), Gaps = 7/104 (6%) Query: 9 FWRAICAEFFASLFYVFFGLGASLRWAPGPLHVLQVALAFGLALATLVQAVGHISGAHVN 68 + +AI E + + +G ++ P L GL + ++ +G+I+G+ +N Sbjct: 144 YGQAILTEAIGTFLLMLVIMGVAVD-ERAPPGFAG--LVIGLTVGGIITTIGNITGSSLN 200 Query: 69 PAVTFAFLVGSQMSLLRA----ICYMVAQLLGAVAGAAVLYSVT 108 PA TF +G + + Y++ ++GAVA A + + Sbjct: 201 PARTFGPYLGDSLMGINLWQYFPIYVIGPIVGAVAAAWLYNYLA 244 >2O9F-A nrPDB Length = 234 Score = 162 bits (409), Expect = 2e-40, Method: Composition-based stats. Identities = 80/231 (34%), Positives = 116/231 (50%), Gaps = 16/231 (6%) Query: 10 WRAICAEFFASLFYVFFGLGASLRWAPGP---LHVLQVALAFGLALATLVQAVGHISGAH 66 +R + AE F + + VF G G+++ A P + VALAFGL + T+ AVGHISG H Sbjct: 5 FRKLAAESFGTFWLVFGGSGSAVLAAGFPELGIGFAGVALAFGLTVLTMAFAVGHISGGH 64 Query: 67 VNPAVTFAFLVGSQMSLLRAICYMVAQLLGAVAGAAVLYSVTPP-----AVRGNLALNTL 121 NPAVT G + + Y++AQ++G + AA+LY + A A N Sbjct: 65 FNPAVTIGLWAGGRFPAKEVVGYVIAQVVGGIVAAALLYLIASGKTGFDAAASGFASNGY 124 Query: 122 H----PGVSVGQATIVEIFLTLQFVLCIFATYDERRNGRLGSVALAVGFSLTLGHLFGMY 177 G S+ A +VE+ L+ F+L I D + G +A+G + TL HL + Sbjct: 125 GEHSPGGYSMLSALVVELVLSAGFLLVIHGATD--KFAPAGFAPIAIGLACTLIHLISIP 182 Query: 178 YTGAGMNPARSFAPAILTRNFT--NHWVYWVGPVIGAGLGSLLYDFLLFPR 226 T +NPARS A AI + W +WV P++G +G L+Y LL R Sbjct: 183 VTNTSVNPARSTAVAIFQGGWALEQLWFFWVVPIVGGIIGGLIYRTLLEKR 233 >6F7H-A nrPDB Length = 301 Score = 160 bits (406), Expect = 4e-40, Method: Composition-based stats. Identities = 60/279 (21%), Positives = 107/279 (38%), Gaps = 30/279 (10%) Query: 11 RAICAEFFASLFYVFFGLGA---SLRWAPGPLHVLQVALAFGLALATLVQAVGHISGAHV 67 R AEF + GA ++ + + LA LA+ + G++SGAH+ Sbjct: 22 RQCLAEFLGVFVLMLLTQGAVAQAVTSGETKGNFFTMFLAGSLAVTIAIYVGGNVSGAHL 81 Query: 68 NPAVTFAFLVGSQMSLLRAICYMVAQLLGAVAGAAVLY---------------SVTPPAV 112 NPA + A + ++ ++ Y++ QLL A + Y +VT P Sbjct: 82 NPAFSLAMCIVGRLPWVKLPIYILVQLLSAFCASGATYVLYHDALQNYTGGNLTVTGPKE 141 Query: 113 RGNLALNTLHPGVSVGQATIVEIFLTLQFVLCIFATYDERRNGRLGSV-ALAVGFSLTLG 171 ++ P +S+ + ++ T ++ + A D R G + + VG + Sbjct: 142 TASIFATYPAPYLSLNNGFLDQVLGTGMLIVGLLAILDRRNKGVPAGLEPVVVGMLILAL 201 Query: 172 HLFGMYYTGAGMNPARSFAPAILT-------RNFTNH----WVYWVGPVIGAGLGSLLYD 220 L G +NPAR P + T F+ WV V P++GA +G+ Y Sbjct: 202 GLSMGANCGIPLNPARDLGPRLFTYVAGWGPEVFSAGNGWWWVPVVAPLVGATVGTATYQ 261 Query: 221 FLLFPRLKSVSERLSILKGSRPSESNGQPEVTGEPVELK 259 L+ E L ++ S + + + +E K Sbjct: 262 LLVALHHPEGPEPAQDLVSAQHKASELETPASAQMLECK 300 >5Z7D-A nrPDB Length = 412 Score = 30.0 bits (66), Expect = 1.2, Method: Composition-based stats. Identities = 15/84 (17%), Positives = 33/84 (39%), Gaps = 5/84 (5%) Query: 16 EFFASLFYVFFGLGASLRWAPGPLHVLQVALAFGLALATLVQAVGHISGAHVNPAVTFAF 75 EFF + +L+ P +++ ++ FG + +S +VNP + + Sbjct: 253 EFFRVKVF-----DTALKSKFIPRNIIAISDYFGCNGFLEIYRASCVSDVNVNPTMVISN 307 Query: 76 LVGSQMSLLRAICYMVAQLLGAVA 99 + + + I Y+ +Q G Sbjct: 308 TLRQRANATPKISYLFSQARGTFV 331 >5YZW-A nrPDB Length = 201 Score = 30.0 bits (66), Expect = 1.2, Method: Composition-based stats. Identities = 15/84 (17%), Positives = 33/84 (39%), Gaps = 5/84 (5%) Query: 16 EFFASLFYVFFGLGASLRWAPGPLHVLQVALAFGLALATLVQAVGHISGAHVNPAVTFAF 75 EFF + +L+ P +++ ++ FG + +S +VNP + + Sbjct: 42 EFFRVKVF-----DTALKSKFIPRNIIAISDYFGCNGFLEIYRASCVSDVNVNPTMVISN 96 Query: 76 LVGSQMSLLRAICYMVAQLLGAVA 99 + + + I Y+ +Q G Sbjct: 97 TLRQRANATPKISYLFSQARGTFV 120 >3DZU-A nrPDB Length = 467 Score = 29.6 bits (65), Expect = 1.4, Method: Composition-based stats. Identities = 23/94 (24%), Positives = 40/94 (42%), Gaps = 3/94 (3%) Query: 98 VAGAAVLYSVTPPAVRGNLALNTLHPGVSVGQATIVEI---FLTLQFVLCIFATYDERRN 154 + V S+T P RG++A +LHP + G + ++ TL + + Sbjct: 15 MFSTQVNSSLTSPTGRGSMAAPSLHPSLGPGIGSPGQLHSPISTLSSPINGMGPPFSVIS 74 Query: 155 GRLGSVALAVGFSLTLGHLFGMYYTGAGMNPARS 188 +G +++V + TLG G + MNP S Sbjct: 75 SPMGPHSMSVPTTPTLGFSTGSPQLSSPMNPVSS 108 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.319 0.140 0.376 Lambda K H 0.267 0.0429 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 9,277,252 Number of Sequences: 36641 Number of extensions: 344769 Number of successful extensions: 1267 Number of sequences better than 10.0: 49 Number of HSP's better than 10.0 without gapping: 45 Number of HSP's successfully gapped in prelim test: 29 Number of HSP's that attempted gapping in prelim test: 1084 Number of HSP's gapped (non-prelim): 89 length of query: 263 length of database: 10,336,785 effective HSP length: 95 effective length of query: 168 effective length of database: 6,855,890 effective search space: 1151789520 effective search space used: 1151789520 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.2 bits) S2: 58 (26.9 bits)