BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= P06280 (429 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 3LXA-A nrPDB 828 0.0 1KTC-A nrPDB 405 e-113 4DO5-A nrPDB 358 2e-99 6F4C-B nrPDB 263 2e-70 1UAS-A nrPDB 255 3e-68 4OGZ-A nrPDB 241 5e-64 4NZJ-A nrPDB 234 4e-62 3A5V-A nrPDB 206 1e-53 3LRL-A nrPDB 179 3e-45 1T0O-A nrPDB 177 6e-45 3A22-A nrPDB 161 5e-40 4NZF-A nrPDB 93 3e-19 3CC1-A nrPDB 82 6e-16 2XN1-A nrPDB 42 7e-04 3MI6-A nrPDB 39 0.003 5JH8-A nrPDB 32 0.57 4FNP-A nrPDB 31 1.0 5N4W-A nrPDB 30 1.6 2YFN-A nrPDB 30 2.7 2PQ6-A nrPDB 28 9.4 >3LXA-A nrPDB Length = 404 Score = 828 bits (2140), Expect = 0.0, Method: Compositional matrix adjust. Identities = 396/398 (99%), Positives = 396/398 (99%) Query: 32 LDNGLARTPTMGWLHWERFMCNLDCQEEPDSCISEKLFMEMAELMVSEGWKDAGYEYLCI 91 LDNGLARTPTMGWLHWERFMCNLDCQEEPDSCISEKLFMEMAELMVSEGWKDAGYEYLCI Sbjct: 1 LDNGLARTPTMGWLHWERFMCNLDCQEEPDSCISEKLFMEMAELMVSEGWKDAGYEYLCI 60 Query: 92 DDCWMAPQRDSEGRLQADPQRFPHGIRQLANYVHSKGLKLGIYADVGNKTCAGFPGSFGY 151 DDCWMAPQRDSEGRLQADPQRFPHGIRQLANYVHSKGLKLGIYADVGNKTCAGFPGSFGY Sbjct: 61 DDCWMAPQRDSEGRLQADPQRFPHGIRQLANYVHSKGLKLGIYADVGNKTCAGFPGSFGY 120 Query: 152 YDIDAQTFADWGVDLLKFDGCYCDSLENLADGYKHMSLALNRTGRSIVYSCEWPLYMWPF 211 YDIDAQTFADWGVDLLKFDGCYCDSLENLADGYKHMSLALNRTGRSIVYSC WP YMWPF Sbjct: 121 YDIDAQTFADWGVDLLKFDGCYCDSLENLADGYKHMSLALNRTGRSIVYSCSWPAYMWPF 180 Query: 212 QKPNYTEIRQYCNHWRNFADIDDSWKSIKSILDWTSFNQERIVDVAGPGGWNDPDMLVIG 271 QKPNYTEIRQYCNHWRNFADIDDSWKSIKSILDWTSFNQERIVDVAGPGGWNDPDMLVIG Sbjct: 181 QKPNYTEIRQYCNHWRNFADIDDSWKSIKSILDWTSFNQERIVDVAGPGGWNDPDMLVIG 240 Query: 272 NFGLSWNQQVTQMALWAIMAAPLFMSNDLRHISPQAKALLQDKDVIAINQDPLGKQGYQL 331 NFGLSWNQQVTQMALWAIMAAPLFMSNDLRHISPQAKALLQDKDVIAINQDPLGKQGYQL Sbjct: 241 NFGLSWNQQVTQMALWAIMAAPLFMSNDLRHISPQAKALLQDKDVIAINQDPLGKQGYQL 300 Query: 332 RQGDNFEVWERPLSGLAWAVAMINRQEIGGPRSYTIAVASLGKGVACNPACFITQLLPVK 391 RQGDNFEVWERPLSGLAWAVAMINRQEIGGPRSYTIAVASLGKGVACNPACFITQLLPVK Sbjct: 301 RQGDNFEVWERPLSGLAWAVAMINRQEIGGPRSYTIAVASLGKGVACNPACFITQLLPVK 360 Query: 392 RKLGFYEWTSRLRSHINPTGTVLLQLENTMQMSLKDLL 429 RKLGFYEWTSRLRSHINPTGTVLLQLENTMQMSLKDLL Sbjct: 361 RKLGFYEWTSRLRSHINPTGTVLLQLENTMQMSLKDLL 398 >1KTC-A nrPDB Length = 405 Score = 405 bits (1042), Expect = e-113, Method: Compositional matrix adjust. Identities = 206/386 (53%), Positives = 264/386 (68%), Gaps = 8/386 (2%) Query: 32 LDNGLARTPTMGWLHWERFMCNLDCQEEPDSCISEKLFMEMAELMVSEGWKDAGYEYLCI 91 L+NGLARTP MGWL WERF CN++C+E+P CISE LFMEMA+ + +GW++ GY+Y+ I Sbjct: 1 LENGLARTPPMGWLAWERFRCNVNCREDPRQCISEMLFMEMADRIAEDGWRELGYKYINI 60 Query: 92 DDCWMAPQRDSEGRLQADPQRFPHGIRQLANYVHSKGLKLGIYADVGNKTCAGFPG-SFG 150 DDCW A QRD+EGRL DP+RFP GI+ LA+YVH++GLKLGIY D+G TC G+PG + Sbjct: 61 DDCWAAKQRDAEGRLVPDPERFPRGIKALADYVHARGLKLGIYGDLGRLTCGGYPGTTLD 120 Query: 151 YYDIDAQTFADWGVDLLKFDGCYCDSLENLADGYKHMSLALNRTGRSIVYSCEWPLYMWP 210 + DAQTFA+WGVD+LK DGCY E A GY M+ ALN TGR IVYSC WP Y Sbjct: 121 RVEQDAQTFAEWGVDMLKLDGCYSSGKEQ-AQGYPQMARALNATGRPIVYSCSWPAYQGG 179 Query: 211 F-QKPNYTEIRQYCNHWRNFADIDDSWKSIKSILDWTSFNQERIVDVAGPGGWNDPDMLV 269 K NYT + + CN WRN+ DI DSW S+ SI+DW NQ+ + AGPG WNDPDML+ Sbjct: 180 LPPKVNYTLLGEICNLWRNYDDIQDSWDSVLSIVDWFFTNQDVLQPFAGPGHWNDPDMLI 239 Query: 270 IGNFGLSWNQQVTQMALWAIMAAPLFMSNDLRHISPQAKALLQDKDVIAINQDPLGKQGY 329 IGNFGLS+ Q +QMALW IMAAPL MS DLR ISP AK +LQ++ +I INQDPLG QG Sbjct: 240 IGNFGLSYEQSRSQMALWTIMAAPLLMSTDLRTISPSAKKILQNRLMIQINQDPLGIQGR 299 Query: 330 Q-LRQGDNFEVWERPLSGLAWAVAMINRQEIGGPRSYTIAVASLGKGVACNPACFITQLL 388 + +++G + EV+ RPLS A A+ +R+ P YT ++A LG + A + Q + Sbjct: 300 RIIKEGSHIEVFLRPLSQAASALVFFSRR-TDMPFRYTTSLAKLGFPMG---AAYEVQDV 355 Query: 389 PVKRKLGFYEWTSRLRSHINPTGTVL 414 + + + INP+G V+ Sbjct: 356 YSGKIISGLKTGDNFTVIINPSGVVM 381 >4DO5-A nrPDB Length = 400 Score = 358 bits (919), Expect = 2e-99, Method: Compositional matrix adjust. Identities = 195/387 (50%), Positives = 249/387 (64%), Gaps = 11/387 (2%) Query: 32 LDNGLARTPTMGWLHWERFMCNLDCQEEPDSCISEKLFMEMAELMVSEGWKDAGYEYLCI 91 LDNGL +TP MGWL WERF CN++C E+P +CISE+LFMEMA+ M +GW+D GY YL I Sbjct: 1 LDNGLLQTPPMGWLAWERFRCNINCDEDPKNCISEQLFMEMADRMAQDGWRDMGYTYLNI 60 Query: 92 DDCWMAPQRDSEGRLQADPQRFPHGIRQLANYVHSKGLKLGIYADVGNKTCAGFPGS-FG 150 DDCW+ RD+ GRL DP+RFPHGI LA+YVHS GLKLGIYAD+GN TC G+PG+ Sbjct: 61 DDCWIG-GRDASGRLMPDPKRFPHGIPFLADYVHSLGLKLGIYADMGNFTCMGYPGTTLD 119 Query: 151 YYDIDAQTFADWGVDLLKFDGCYCDSLENLADGYKHMSLALNRTGRSIVYSCEWPLYMWP 210 DAQTFA+W VD+LK DGC+ + E A GY M+ ALN TGR I +SC WP Y Sbjct: 120 KVVQDAQTFAEWKVDMLKLDGCFS-TPEERAQGYPKMAAALNATGRPIAFSCSWPAYEGG 178 Query: 211 FQ-KPNYTEIRQYCNHWRNFADIDDSWKSIKSILDWTSFNQERIVDVAGPGGWNDPDMLV 269 + Y+ + CN WRN+ DI DSW S+ SIL+W +Q+ + VAGPG WNDPDML+ Sbjct: 179 LPPRVQYSLLADICNLWRNYDDIQDSWWSVLSILNWFVEHQDILQPVAGPGHWNDPDMLL 238 Query: 270 IGNFGLSWNQQVTQMALWAIMAAPLFMSNDLRHISPQAKALLQDKDVIAINQDPLGKQGY 329 IGNFGLS Q QMALW ++AAPL MS DLR IS Q +LQ+ +I INQDPLG QG Sbjct: 239 IGNFGLSLEQSRAQMALWTVLAAPLLMSTDLRTISAQNMDILQNPLMIKINQDPLGIQGR 298 Query: 330 QLRQGDNF-EVWERPLSGLAWAVAMIN-RQEIGGPRSYTIAVASLGKGVACNPACFITQL 387 ++ + + EV+ RPLS A A+ + R ++ P Y +SLG+ + Q Sbjct: 299 RIHKEKSLIEVYMRPLSNKASALVFFSCRTDM--PYRYH---SSLGQLNFTGSVIYEAQD 353 Query: 388 LPVKRKLGFYEWTSRLRSHINPTGTVL 414 + + + INP+G V+ Sbjct: 354 VYSGDIISGLRDETNFTVIINPSGVVM 380 >6F4C-B nrPDB Length = 363 Score = 263 bits (671), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 146/332 (43%), Positives = 190/332 (57%), Gaps = 31/332 (9%) Query: 32 LDNGLARTPTMGWLHWERFMCNLDCQEEPDSCISEKLFMEMAELMVSEGWKDAGYEYLCI 91 L NGL RTP MGW W F CN I EK E A+ MVS G GYEY+ I Sbjct: 1 LSNGLGRTPQMGWSSWNHFACN----------IEEKEIRETADAMVSTGLASLGYEYINI 50 Query: 92 DDCWMAPQRDSEGRLQADPQRFPHGIRQLANYVHSKGLKLGIYADVGNKTCAG-FPGSFG 150 DDCW RDS+G + FP GI+ LA+YVHSKGLKLGIY+D G++TC+ GS G Sbjct: 51 DDCWAELNRDSQGNMVPKGSTFPSGIKALADYVHSKGLKLGIYSDAGSQTCSKQMTGSLG 110 Query: 151 YYDIDAQTFADWGVDLLKFDGCYCDSLENLADGYKHMSLALNRTGRSIVYS-CEWPLYMW 209 + + DA+TFA WGVD LK+D C ++ + + Y M+ AL +GR+I YS CEW Sbjct: 111 HEEQDAKTFASWGVDYLKYDNCNNEN-RSPRERYPIMAKALKNSGRAIFYSLCEWG---- 165 Query: 210 PFQKPNYTEIRQYCNHWRNFADIDDSWKSIKSILD----WTSFNQERIVDVAGPGGWNDP 265 T N WR DI D+W S+ S D W S+ AGPGGWNDP Sbjct: 166 --DDDPATWASSVGNSWRTTGDISDNWDSMTSRADMNDEWASY--------AGPGGWNDP 215 Query: 266 DMLVIGNFGLSWNQQVTQMALWAIMAAPLFMSNDLRHISPQAKALLQDKDVIAINQDPLG 325 DML +GN G++ + + ++WA+ APL + DLR + A +L +K+VIA+NQD LG Sbjct: 216 DMLEVGNGGMTTAEYRSHFSIWALAKAPLIIGCDLRSMDQTAHEILSNKEVIAVNQDKLG 275 Query: 326 KQGYQLRQGDNFEVWERPLSGLAWAVAMINRQ 357 QG +++Q + EVW PLSG A+ + NR Sbjct: 276 VQGKKVKQNGDLEVWAGPLSGKRVALVLWNRS 307 >1UAS-A nrPDB Length = 362 Score = 255 bits (651), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 137/329 (41%), Positives = 193/329 (58%), Gaps = 23/329 (6%) Query: 32 LDNGLARTPTMGWLHWERFMCNLDCQEEPDSCISEKLFMEMAELMVSEGWKDAGYEYLCI 91 +NGL RTP MGW W F C I+E++ E A+ +V+ G GY+Y+ I Sbjct: 1 FENGLGRTPQMGWNSWNHFYCG----------INEQIIRETADALVNTGLAKLGYQYVNI 50 Query: 92 DDCWMAPQRDSEGRLQADPQRFPHGIRQLANYVHSKGLKLGIYADVGNKTCAG-FPGSFG 150 DDCW RDS+G + Q FP GI+ LA+YVH+KGLKLGIY+D G++TC+ PGS Sbjct: 51 DDCWAEYSRDSQGNFVPNRQTFPSGIKALADYVHAKGLKLGIYSDAGSQTCSNKMPGSLD 110 Query: 151 YYDIDAQTFADWGVDLLKFDGCYCDSLENLADGYKHMSLALNRTGRSIVYS-CEWPLYMW 209 + + D +TFA WGVD LK+D C D+ ++ + Y MS A+ G++I +S CEW Sbjct: 111 HEEQDVKTFASWGVDYLKYDNCN-DAGRSVMERYTRMSNAMKTYGKNIFFSLCEWG---- 165 Query: 210 PFQKPNYTEIRQYCNHWRNFADIDDSWKSIKSILDWTSFNQERIVDVAGPGGWNDPDMLV 269 ++ T + N WR DI D+W S+ S D ++ AGPGGWNDPDML Sbjct: 166 --KENPATWAGRMGNSWRTTGDIADNWGSMTSRAD----ENDQWAAYAGPGGWNDPDMLE 219 Query: 270 IGNFGLSWNQQVTQMALWAIMAAPLFMSNDLRHISPQAKALLQDKDVIAINQDPLGKQGY 329 +GN G+S + + ++WA+ APL + D+R +S Q K +L + +VIA+NQD LG QG Sbjct: 220 VGNGGMSEAEYRSHFSIWALAKAPLLIGCDVRSMSQQTKNILSNSEVIAVNQDSLGVQGK 279 Query: 330 QLRQGDNFEVWERPLSGLAWAVAMINRQE 358 +++ + EVW PLS AV + NRQ Sbjct: 280 KVQSDNGLEVWAGPLSNNRKAVVLWNRQS 308 >4OGZ-A nrPDB Length = 473 Score = 241 bits (614), Expect = 5e-64, Method: Compositional matrix adjust. Identities = 141/360 (39%), Positives = 203/360 (56%), Gaps = 44/360 (12%) Query: 36 LARTPTMGWLHWERFMCNLDCQEEPDSCISEKLFMEMAELMVSEGWKDAGYEYLCIDDCW 95 L TP MGW W F +L +E+L ++ A+ MV G +D GY Y+ IDD W Sbjct: 96 LLLTPPMGWNSWNTFGRHL----------TEELLLQTADAMVENGMRDLGYAYINIDDFW 145 Query: 96 MAPQRDSEGRLQADPQRFPHGIRQLANYVHSKGLKLGIYADVGNKTCAGFPGSFGYYDID 155 P+R ++G +Q D +FP GI+ +A+Y+H +G KLGIY+D +KTC G GS+GY +ID Sbjct: 146 QLPERGADGHIQIDKTKFPRGIKYVADYLHERGFKLGIYSDAADKTCGGVCGSYGYEEID 205 Query: 156 AQTFADWGVDLLKFDGCYCDSLENLADG---YKHMSLALNRTGRSIVYS-CEWPLYMWPF 211 A+ FA WGVDLLK+D YC++ + Y+ M AL T RSIV+S CEW Sbjct: 206 ARDFASWGVDLLKYD--YCNAPAGRVEAMERYEKMGRALRATDRSIVFSICEWG------ 257 Query: 212 QKPNYTEIRQYCNH-WRNFADIDDSWK-------SIKSILDWTSFNQERIVDVAGPGGWN 263 Q+ + ++ H WR DI D W ++ IL+ N + + A PGGWN Sbjct: 258 QREPWKWAKKVGGHLWRVSGDIGDLWNRSTDEKGGLRGILNILEINAP-LSEYARPGGWN 316 Query: 264 DPDMLVIG-----------NFGLSWNQQVTQMALWAIMAAPLFMSNDLRHISPQAKALLQ 312 DPDMLV+G + G + Q + ALW +MA+PL ND+R ++ +L Sbjct: 317 DPDMLVVGIGGKSKSIGYESEGCTNEQYQSHFALWCMMASPLLCGNDVRQMNDSTLQILL 376 Query: 313 DKDVIAINQDPLGKQGYQLRQGDNFEVWERPLSGLAWAVAMINRQEIGGPRSYTIAVASL 372 +KD+IAINQDPLG Q + + D+++VW +PLS + A+A +NR I GP + V ++ Sbjct: 377 NKDLIAINQDPLGIQAERAIRADHYDVWVKPLSDGSKAIACLNR--ISGPVDVELNVKTV 434 >4NZJ-A nrPDB Length = 477 Score = 234 bits (598), Expect = 4e-62, Method: Compositional matrix adjust. Identities = 136/343 (39%), Positives = 192/343 (55%), Gaps = 40/343 (11%) Query: 36 LARTPTMGWLHWERFMCNLDCQEEPDSCISEKLFMEMAELMVSEGWKDAGYEYLCIDDCW 95 L TP MGW W F +L +E+L ++ A+ M++ G +D GY Y+ IDD W Sbjct: 96 LLLTPPMGWNSWNTFGQHL----------TEELVLQTADAMITNGMRDLGYSYINIDDFW 145 Query: 96 MAPQRDSEGRLQADPQRFPHGIRQLANYVHSKGLKLGIYADVGNKTCAGFPGSFGYYDID 155 P+R ++G LQ D +FP GI+ +A+Y+H +G KLGIY+D KTC G GS+GY + D Sbjct: 146 QLPERGADGHLQIDKTKFPRGIKYVADYLHERGFKLGIYSDAAEKTCGGVCGSYGYEETD 205 Query: 156 AQTFADWGVDLLKFDGCYC--DSLENLADGYKHMSLALNRTGRSIVYS-CEWPLYMWPFQ 212 A+ FA WGVDLLK+D C D +E + + Y M AL T RSIVYS CEW Q Sbjct: 206 AKDFASWGVDLLKYDYCNAPVDRVEAM-ERYAKMGRALRATNRSIVYSVCEWG------Q 258 Query: 213 KPNYTEIRQYCNH-WRNFADIDDSW-------KSIKSILDWTSFNQERIVDVAGPGGWND 264 + + +Q H WR DI D W + IL+ N + + AGP GWND Sbjct: 259 REPWKWAKQVGGHLWRVSGDIGDIWYRDGNRVGGLHGILNILEINAP-LSEYAGPSGWND 317 Query: 265 PDMLVIG-----------NFGLSWNQQVTQMALWAIMAAPLFMSNDLRHISPQAKALLQD 313 PDMLV+G + G + Q + +LW +MA+PL ND+R+++ +L D Sbjct: 318 PDMLVVGIDGKSMSIGYESEGCTQEQYKSHFSLWCMMASPLLSGNDVRNMNDSTLKILLD 377 Query: 314 KDVIAINQDPLGKQGYQLRQGDNFEVWERPLSGLAWAVAMINR 356 D+IAINQD LG+Q + + D++++W +PL+ AVA NR Sbjct: 378 PDLIAINQDVLGRQAERSIRSDHYDIWVKPLADGRKAVACFNR 420 >3A5V-A nrPDB Length = 397 Score = 206 bits (525), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 114/311 (36%), Positives = 164/311 (52%), Gaps = 37/311 (11%) Query: 33 DNGLARTPTMGWLHWERFMCNLDCQEEPDSCISEKLFMEMAELMVSEGWKDAGYEYLCID 92 +NGLA TP MGW W ++ CN+D E+L ++ A+ + S G KD GY Y+ ID Sbjct: 2 NNGLAITPQMGWNTWNKYGCNVD----------EQLILDAAKAIASSGLKDLGYNYVIID 51 Query: 93 DCWMAPQRDSEGRLQADPQRFPHGIRQLANYVHSKGLKLGIYADVGNKTCAGFPGSFGYY 152 DCW +R+S L ADP +FP GI+ L + +H+ GLK GIY+ G TC G S GY Sbjct: 52 DCWQKNERESSKTLLADPTKFPRGIKPLVDDIHNLGLKAGIYSSAGTLTCGGHIASLGYE 111 Query: 153 DIDAQTFADWGVDLLKFDGCYCDSLENLA----DGYKHMSLALNRTGRSIVYS-CEWPLY 207 DIDA+T+A WG+D LK+D CY D YK M ALN+TGR ++YS C W Sbjct: 112 DIDAKTWAKWGIDYLKYDNCYNQGQSGTPKLSYDRYKAMGNALNKTGRPMLYSLCNWG-- 169 Query: 208 MWPFQKPNYTEIRQYCNHWRNFADIDDSWKSIKSILDWTSFN----------------QE 251 + + N WR D+ D++ T+++ Sbjct: 170 ----EDGPWNFASTISNSWRISGDVYDNFNRPDPACPCTTYDCVLAGFRCSVMNIINKAV 225 Query: 252 RIVDVAGPGGWNDPDMLVIGNFGLSWNQQVTQMALWAIMAAPLFMSNDLRHISPQAKALL 311 + A GGWND DML +GN G++ + +WA + +PL + ND+ +I+ K ++ Sbjct: 226 AVSQKARSGGWNDLDMLEVGNGGMNQEEYRVHYTIWAALKSPLILGNDVTNITNTTKEII 285 Query: 312 QDKDVIAINQD 322 +K+VIA+NQD Sbjct: 286 MNKEVIAVNQD 296 >3LRL-A nrPDB Length = 479 Score = 179 bits (453), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 118/371 (31%), Positives = 181/371 (48%), Gaps = 58/371 (15%) Query: 34 NGLARTPTMGWLHWERFMCNLDCQEEPDSCISEKLFMEMAELMVSEGWKDAGYEYLCIDD 93 NGL TP MGW +W F C+ +SE+L ++ A+ + G KD GY+Y+ +DD Sbjct: 24 NGLGLTPQMGWDNWNTFACD----------VSEQLLLDTADRISDLGLKDMGYKYIILDD 73 Query: 94 CWMAPQRDSEGRLQADPQRFPHGIRQLANYVHSKGLKLGIYADVGNKTCAGFPGSFGYYD 153 CW + RDS+G L AD Q+FP+G+ +A+++H+ G+Y+ G TCAG+PGS G + Sbjct: 74 CW-SSGRDSDGFLVADEQKFPNGMGHVADHLHNNSFLFGMYSSAGEYTCAGYPGSLGREE 132 Query: 154 IDAQTFADWGVDLLKFDGCYCD----SLENLADGYKHMSLALNRTGRSIVYS-CEWPLYM 208 DAQ FA+ VD LK+D CY + E YK MS ALN+TGR + YS C W Sbjct: 133 EDAQFFANNRVDYLKYDNCYNKGQFGTPEISYHRYKAMSDALNKTGRPVFYSLCNWG--- 189 Query: 209 WPFQKPNYTEIRQYCNHWRNFADIDDSWK----------------------SIKSILDWT 246 Q + N WR D+ + SI +IL+ Sbjct: 190 ---QDLTFYWGSGIANSWRMSGDVTAEFTRPDSRCPCDGDEYDCKYAGFHCSIMNILN-- 244 Query: 247 SFNQERIVDVAGPGGWNDPDMLVIGNFGLSWNQQVTQMALWAIMAAPLFMSNDLRHISPQ 306 + AG GGWND D L +G L+ +++ ++WA++ +PL + ++ ++ Sbjct: 245 --KAAPMGQNAGVGGWNDLDNLEVGVGNLTDDEEKAHFSMWAMVKSPLIIGANVNNLKAS 302 Query: 307 AKALLQDKDVIAINQDPLGKQG-----YQLRQGDNF-----EVWERPLSGLAWAVAMINR 356 + ++ VIAINQD G Y + D + ++W PL VA++N Sbjct: 303 SYSIYSQASVIAINQDSNGIPATRVWRYYVSDTDEYGQGEIQMWSGPLDNGDQVVALLNG 362 Query: 357 QEIGGPRSYTI 367 + P + T+ Sbjct: 363 GSVSRPMNTTL 373 >1T0O-A nrPDB Length = 417 Score = 177 bits (450), Expect = 6e-45, Method: Compositional matrix adjust. Identities = 120/337 (35%), Positives = 156/337 (46%), Gaps = 65/337 (19%) Query: 33 DNGLARTPTMGWLHWERFMCNLDCQEEPDSCISEKLFMEMAELMVSEGWKDAGYEYLCID 92 D + P++GW W + C++D E F+ AEL+VS G DAGY Y+ ID Sbjct: 5 DGVTGKVPSLGWNSWNAYHCDID----------ESKFLSAAELIVSSGLLDAGYNYVNID 54 Query: 93 DCWMAPQRDSEGRLQADPQRFPHGIRQLANYVHSKGLKLGIYADVGNKTCAGFPGSFGYY 152 DCW +G + + RFP GI LA VH+ GLKLGIY+ G TCAG+P S GY Sbjct: 55 DCWSMKDGRVDGHIAPNATRFPDGIDGLAKKVHALGLKLGIYSTAGTATCAGYPASLGYE 114 Query: 153 DIDAQTFADWGVDLLKFDGC--------------------------------------YC 174 D+DA FADWGVD LK+D C Y Sbjct: 115 DVDAADFADWGVDYLKYDNCNVPSDWQDEYVACNPDFVKTGPNGTCTTALDPTLAPPGYD 174 Query: 175 DSLENLADGYKHMSLALNRTGRSIVYS-CEW---PLYMWPFQKPNYTEIRQYCNHWRNFA 230 S A+ + M AL + IV S C W ++ W N T I WR Sbjct: 175 WSTSKSAERFGAMRNALAKQSHEIVLSMCIWGQADVFSW----GNSTGIS-----WRMSD 225 Query: 231 DIDDSWKSIKSILDWTSFNQERIVDVAGPGGWNDPDMLVIGNFGLSWNQQVTQMALWAIM 290 DI +W S+ IL+ SF VD G ND DML +GN L+ + T ALWA M Sbjct: 226 DISPNWGSVTRILNLNSFKLNS-VDFWGH---NDADMLEVGNGNLTAAETRTHFALWAAM 281 Query: 291 AAPLFMSNDLRHISPQAKALLQDKDVIAINQDPLGKQ 327 +PL + DL +S LL++K ++A NQD + Q Sbjct: 282 KSPLLIGTDLAQLSQNNINLLKNKHLLAFNQDSVYGQ 318 >3A22-A nrPDB Length = 614 Score = 161 bits (407), Expect = 5e-40, Method: Compositional matrix adjust. Identities = 109/333 (32%), Positives = 158/333 (47%), Gaps = 30/333 (9%) Query: 42 MGWLHWERFMCNLDCQEEPDSCISEKLFMEMAELMVSEGWKDAGYEYLCIDDCWMAPQRD 101 MGW W F +D + + + V+ G AGY Y+ ID+ W RD Sbjct: 14 MGWASWNSFAAKID----------YSVIKKQVDAFVAAGLPAAGYTYINIDEGWWQGTRD 63 Query: 102 SEGRLQADPQRFPHGIRQLANYVHSKGLKLGIYADVGNKTCA-----GFP-----GSFGY 151 S G + D +P G+ + Y+HSKGLK GIY D G C G P GS G+ Sbjct: 64 SAGNITVDTAEWPGGMSAITAYIHSKGLKAGIYTDAGKDGCGYYYPTGRPAAPGSGSEGH 123 Query: 152 YDIDAQTFADWGVDLLKFDGCYCDSLENL--ADGYKHMSLALNRTGRSIVYSCEWPLYMW 209 YD D F+ WG D +K D C D+ E L A YK +S A+ R + + W Sbjct: 124 YDQDMLQFSTWGFDFVKVDWCGGDA-EGLDAATTYKSISDAVGRAAATTGRPLTLSICNW 182 Query: 210 PFQKPNYTEIRQYCNHWRNFADID--DSWKSIKSILDWTSFNQERIVDVAGPGGWNDPDM 267 +Q P + WR DI + S+ S+L ++F+Q G +NDPDM Sbjct: 183 GYQNP-WNWAAGQAPLWRTSTDIIYYGNQPSMTSLL--SNFDQTLHPTAQHTGYYNDPDM 239 Query: 268 LVIGNFGLSWNQQVTQMALWAIMAAPLFMSNDLRHISPQAKALLQDKDVIAINQDPLGKQ 327 L++G G + Q T M LWAI APL NDL ++ + +L++ +VIA++QD G Q Sbjct: 240 LMVGMDGFTAAQNRTHMNLWAISGAPLLAGNDLTTMTSETAGILKNPEVIAVDQDSRGLQ 299 Query: 328 GYQLRQ-GDNFEVWERPLSGLA-WAVAMINRQE 358 G ++ + + + + LSG AV ++NR Sbjct: 300 GVKVAEDTTGLQAYGKVLSGTGNRAVVLLNRTS 332 >4NZF-A nrPDB Length = 448 Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 103/391 (26%), Positives = 155/391 (39%), Gaps = 91/391 (23%) Query: 37 ARTPTMGWLHWERFMCNLDCQEEPDSCISEKLFMEMAELMVSEGWKDAGYEYLCIDDCWM 96 A+TP MGW W DC + ++E AE M ++ K G+EY+ +D W Sbjct: 22 AKTPPMGWNSW-------DCY---GASVTEDEVKGNAEYM-AKYLKPFGWEYVVVDIQWY 70 Query: 97 AP-------------QRDSEGRLQADPQRFP-----HGIRQLANYVHSKGLKLGIY---- 134 P + D RL RFP G + LA+Y+H+ GLK GI+ Sbjct: 71 EPGANSSIYRPFVPLEMDEYSRLMPAVNRFPSAKGGKGFKPLADYIHNLGLKFGIHIMRG 130 Query: 135 --------------ADVGNKTCAGF-----------------PGSFGYYDIDAQTFADWG 163 +VG + A G+ YYD Q +A WG Sbjct: 131 IPRQAVHQNTPILGTNVGARDIADTNSICPWNTDMYGVDHRKEGAQAYYDSLFQLYAQWG 190 Query: 164 VDLLKFDGCYCDSLENL-ADGYKHMSLALNRTGRSIVYSCEWPLYMWPFQKPNYTEIRQY 222 VD +K L + K + A++R GR IV S L P + T + Sbjct: 191 VDFVKVADIVASKLYGTHTEEIKMIRKAIDRCGRPIVLS----LSPGPAPLDHATLFVEN 246 Query: 223 CNHWRNFADIDDSWKSIKSILDWTSFNQ-ERIVDVAGPGGWNDPDMLVIGNFGL------ 275 N WR D D W+ L + F Q + + G G W D DML +G+ G+ Sbjct: 247 ANMWRMTDDFWDRWE-----LLYDMFEQCYKWCKLVGLGHWPDADMLPLGHIGIRSVDGG 301 Query: 276 --------SWNQQVTQMALWAIMAAPLFMSNDLRHISPQAKALLQDKDVIAINQDPLGKQ 327 + ++Q T M LW I +PL +LR +LL +++V+ ++Q+ G + Sbjct: 302 GTDRMTRFTKDEQRTMMTLWIIFRSPLMFGGELRDNDEWTLSLLTNEEVLHVHQNGYGAR 361 Query: 328 GYQLRQGDNFEVWERPLSGLAWAVAMINRQE 358 Q+ + ++ VW + VAM N E Sbjct: 362 --QVYRENDHVVWTSQDAEGNQFVAMFNISE 390 >3CC1-A nrPDB Length = 433 Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 88/353 (24%), Positives = 134/353 (37%), Gaps = 87/353 (24%) Query: 37 ARTPTMGWLHWERFMCNLDCQEEPDSCISEKLFMEMAELMVSEGWKDAGYEYLCIDDCWM 96 A TP MGW W DC + ++E+ + AE M + K G+EY+ +D W Sbjct: 9 ALTPPMGWNSW-------DCY---GASVTEEEVLGNAEYMANH-LKKYGWEYIVVDIQWY 57 Query: 97 APQRDSE-------------GRLQADPQRFPH-----GIRQLANYVHSKGLKLGIYADVG 138 P +S GRL RFP G + L++ +H GLK GI+ G Sbjct: 58 EPTANSSAYNPFAPLCMDEYGRLLPATNRFPSAKNGAGFKPLSDAIHDLGLKFGIHIMRG 117 Query: 139 -------------------------NKTCAGFPGSFG----------YYDIDAQTFADWG 163 N C +G YY+ + +A WG Sbjct: 118 IPRQAVYENSPVLGSTKTAREIAHTNSICPWNTDMYGVDPTKEGAQSYYNSLFELYAQWG 177 Query: 164 VDLLKFDGCYCDSL-ENLADGYKHMSLALNRTGRSIVYSCEWPLYMWPFQKPNYTEIRQY 222 VD +K D L + + K + A+ GR +V S L P + Sbjct: 178 VDFVKVDDIAASRLYDTHLEEIKMIQRAIQACGRPMVLS----LSPGPAPIKYAHHFKTN 233 Query: 223 CNHWRNFADIDDSWKSIKSILDWTSFNQERIVDVAGPGGWNDPDMLVIGNFGL------- 275 N WR D D W + + + ++ I G G W D ML +G+ G+ Sbjct: 234 ANMWRITDDFWDDWSLLYQMFERCEVWEKHI----GTGHWPDCGMLPLGHIGIRSVDGPG 289 Query: 276 -------SWNQQVTQMALWAIMAAPLFMSNDLRHISPQAKALLQDKDVIAINQ 321 + ++Q+T M LWAI +PL +LR +LL ++ +++INQ Sbjct: 290 GDRWTRFTKDEQLTMMNLWAICHSPLMFGGELRDNDEWTLSLLTNEGILSINQ 342 >2XN1-A nrPDB Length = 732 Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 3/55 (5%) Query: 82 KDAGYEYLCIDDCWMAPQRDSEGRL---QADPQRFPHGIRQLANYVHSKGLKLGI 133 K G E +DD W + D L + ++FP+G+ A+YVH +GLK G+ Sbjct: 360 KKLGLEMFVLDDGWFGHRDDDNSSLGDWKVYKKKFPNGLGHFADYVHEQGLKFGL 414 >3MI6-A nrPDB Length = 745 Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust. Identities = 20/68 (29%), Positives = 30/68 (44%), Gaps = 3/68 (4%) Query: 69 FMEMAELMVSEGWKDAGYEYLCIDDCWMAPQRDSEGRLQ---ADPQRFPHGIRQLANYVH 125 F E + + K G E +DD W + D L D ++FP GI + VH Sbjct: 344 FNEAKLMTIVNQAKRLGIEMFVLDDGWFGHRDDDTTSLGDWFVDQRKFPDGIEHFSQAVH 403 Query: 126 SKGLKLGI 133 +G+K G+ Sbjct: 404 QQGMKFGL 411 Score = 28.5 bits (62), Expect = 5.2, Method: Compositional matrix adjust. Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 11/49 (22%) Query: 147 GSFGYYDIDAQTFADWGVDLLKFDGCYCDSLENLADGYKHMSLALNRTG 195 G FG+ D D + DW VD KF DG +H S A+++ G Sbjct: 369 GWFGHRDDDTTSLGDWFVDQRKF-----------PDGIEHFSQAVHQQG 406 >5JH8-A nrPDB Length = 317 Score = 32.0 bits (71), Expect = 0.57, Method: Compositional matrix adjust. Identities = 17/51 (33%), Positives = 24/51 (47%) Query: 101 DSEGRLQADPQRFPHGIRQLANYVHSKGLKLGIYADVGNKTCAGFPGSFGY 151 D E Q D F H I+ L +H+KGLKL + + P ++GY Sbjct: 111 DFEAVAQGDRNNFSHFIQVLGRALHAKGLKLIVSVPAFSAKDENHPANYGY 161 >4FNP-A nrPDB Length = 729 Score = 31.2 bits (69), Expect = 1.0, Method: Compositional matrix adjust. Identities = 19/72 (26%), Positives = 36/72 (50%), Gaps = 5/72 (6%) Query: 69 FMEMAELMVSEGWKDAGYEYLCIDDCWMAPQRDSEGRLQAD----PQRFPHGIRQLANYV 124 F E + ++ + G E + +DD W +RD + R D ++ P+G+ LA V Sbjct: 343 FNEEKIVNIARTEAELGIELVVLDDGWFG-ERDDDRRSLGDWIVNRRKLPNGLDGLAKQV 401 Query: 125 HSKGLKLGIYAD 136 + GL+ G++ + Sbjct: 402 NELGLQFGLWVE 413 >5N4W-A nrPDB Length = 748 Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust. Identities = 22/94 (23%), Positives = 42/94 (44%), Gaps = 18/94 (19%) Query: 106 LQADPQRFPHGIRQLANYVHSKGLKLGIYADVGNKTCAGFPGSFGYYDIDAQTFADWGVD 165 L+A PH I++L N++H +GL+ N T P F +++ Sbjct: 304 LRAVSTGLPHMIQELQNHIHDEGLRA-----TSNLTQENMPTLF----VES--------- 345 Query: 166 LLKFDGCYCDSLENLADGYKHMSLALNRTGRSIV 199 +L+ G + + + +G +H AL++ S+V Sbjct: 346 VLEVHGKFVQLINTVLNGDQHFMSALDKALTSVV 379 >2YFN-A nrPDB Length = 720 Score = 29.6 bits (65), Expect = 2.7, Method: Compositional matrix adjust. Identities = 14/52 (26%), Positives = 24/52 (46%), Gaps = 3/52 (5%) Query: 85 GYEYLCIDDCWMAPQRDSEGRL---QADPQRFPHGIRQLANYVHSKGLKLGI 133 G + + +DD W + D L Q + + + +L VH +G+K GI Sbjct: 359 GIDMVVMDDGWFGKRNDDNSSLGDWQVNETKLGGSLAELITRVHEQGMKFGI 410 >2PQ6-A nrPDB Length = 482 Score = 27.7 bits (60), Expect = 9.4, Method: Compositional matrix adjust. Identities = 16/46 (34%), Positives = 20/46 (43%), Gaps = 2/46 (4%) Query: 192 NRTGRSIVYSCEWPLYMWPFQKPNYTEIRQYCNHWRNFADIDDSWK 237 N T SI P+ WPF T+ R CN W +ID + K Sbjct: 382 NSTTESICAGV--PMLCWPFFADQPTDCRFICNEWEIGMEIDTNVK 425 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 3LXA-A nrPDB 626 e-180 1KTC-A nrPDB 534 e-152 4DO5-A nrPDB 508 e-144 4OGZ-A nrPDB 428 e-120 1UAS-A nrPDB 424 e-119 6F4C-B nrPDB 422 e-118 4NZJ-A nrPDB 418 e-117 3A5V-A nrPDB 385 e-107 3LRL-A nrPDB 380 e-106 3A22-A nrPDB 342 2e-94 4NZF-A nrPDB 329 1e-90 1T0O-A nrPDB 324 6e-89 3CC1-A nrPDB 303 8e-83 2XN1-A nrPDB 75 6e-14 Sequences not found previously or not previously below threshold: 5AWQ-A nrPDB 76 4e-14 3MI6-A nrPDB 60 2e-09 4FNP-A nrPDB 50 1e-06 2YFN-A nrPDB 47 1e-05 3A24-A nrPDB 35 0.052 5M0X-A nrPDB 35 0.075 6GN6-A nrPDB 34 0.097 5L3D-A nrPDB 33 0.26 3ABT-A nrPDB 33 0.26 1VBH-A nrPDB 32 0.69 3L2M-A nrPDB 31 0.84 5KDW-A nrPDB 31 1.0 3HDB-A nrPDB 30 1.9 4BWI-A nrPDB 30 1.9 1TYY-A nrPDB 30 2.4 1DPE-A nrPDB 30 2.4 5XFM-A nrPDB 29 3.2 5F1Q-A nrPDB 29 3.3 5HHA-A nrPDB 29 4.4 5BX9-A nrPDB 28 7.3 4NAS-A nrPDB 28 7.4 1RU4-A nrPDB 28 9.5 >3LXA-A nrPDB Length = 404 Score = 626 bits (1614), Expect = e-180, Method: Composition-based stats. Identities = 396/398 (99%), Positives = 396/398 (99%) Query: 32 LDNGLARTPTMGWLHWERFMCNLDCQEEPDSCISEKLFMEMAELMVSEGWKDAGYEYLCI 91 LDNGLARTPTMGWLHWERFMCNLDCQEEPDSCISEKLFMEMAELMVSEGWKDAGYEYLCI Sbjct: 1 LDNGLARTPTMGWLHWERFMCNLDCQEEPDSCISEKLFMEMAELMVSEGWKDAGYEYLCI 60 Query: 92 DDCWMAPQRDSEGRLQADPQRFPHGIRQLANYVHSKGLKLGIYADVGNKTCAGFPGSFGY 151 DDCWMAPQRDSEGRLQADPQRFPHGIRQLANYVHSKGLKLGIYADVGNKTCAGFPGSFGY Sbjct: 61 DDCWMAPQRDSEGRLQADPQRFPHGIRQLANYVHSKGLKLGIYADVGNKTCAGFPGSFGY 120 Query: 152 YDIDAQTFADWGVDLLKFDGCYCDSLENLADGYKHMSLALNRTGRSIVYSCEWPLYMWPF 211 YDIDAQTFADWGVDLLKFDGCYCDSLENLADGYKHMSLALNRTGRSIVYSC WP YMWPF Sbjct: 121 YDIDAQTFADWGVDLLKFDGCYCDSLENLADGYKHMSLALNRTGRSIVYSCSWPAYMWPF 180 Query: 212 QKPNYTEIRQYCNHWRNFADIDDSWKSIKSILDWTSFNQERIVDVAGPGGWNDPDMLVIG 271 QKPNYTEIRQYCNHWRNFADIDDSWKSIKSILDWTSFNQERIVDVAGPGGWNDPDMLVIG Sbjct: 181 QKPNYTEIRQYCNHWRNFADIDDSWKSIKSILDWTSFNQERIVDVAGPGGWNDPDMLVIG 240 Query: 272 NFGLSWNQQVTQMALWAIMAAPLFMSNDLRHISPQAKALLQDKDVIAINQDPLGKQGYQL 331 NFGLSWNQQVTQMALWAIMAAPLFMSNDLRHISPQAKALLQDKDVIAINQDPLGKQGYQL Sbjct: 241 NFGLSWNQQVTQMALWAIMAAPLFMSNDLRHISPQAKALLQDKDVIAINQDPLGKQGYQL 300 Query: 332 RQGDNFEVWERPLSGLAWAVAMINRQEIGGPRSYTIAVASLGKGVACNPACFITQLLPVK 391 RQGDNFEVWERPLSGLAWAVAMINRQEIGGPRSYTIAVASLGKGVACNPACFITQLLPVK Sbjct: 301 RQGDNFEVWERPLSGLAWAVAMINRQEIGGPRSYTIAVASLGKGVACNPACFITQLLPVK 360 Query: 392 RKLGFYEWTSRLRSHINPTGTVLLQLENTMQMSLKDLL 429 RKLGFYEWTSRLRSHINPTGTVLLQLENTMQMSLKDLL Sbjct: 361 RKLGFYEWTSRLRSHINPTGTVLLQLENTMQMSLKDLL 398 >1KTC-A nrPDB Length = 405 Score = 534 bits (1376), Expect = e-152, Method: Composition-based stats. Identities = 207/389 (53%), Positives = 265/389 (68%), Gaps = 8/389 (2%) Query: 32 LDNGLARTPTMGWLHWERFMCNLDCQEEPDSCISEKLFMEMAELMVSEGWKDAGYEYLCI 91 L+NGLARTP MGWL WERF CN++C+E+P CISE LFMEMA+ + +GW++ GY+Y+ I Sbjct: 1 LENGLARTPPMGWLAWERFRCNVNCREDPRQCISEMLFMEMADRIAEDGWRELGYKYINI 60 Query: 92 DDCWMAPQRDSEGRLQADPQRFPHGIRQLANYVHSKGLKLGIYADVGNKTCAGFPG-SFG 150 DDCW A QRD+EGRL DP+RFP GI+ LA+YVH++GLKLGIY D+G TC G+PG + Sbjct: 61 DDCWAAKQRDAEGRLVPDPERFPRGIKALADYVHARGLKLGIYGDLGRLTCGGYPGTTLD 120 Query: 151 YYDIDAQTFADWGVDLLKFDGCYCDSLENLADGYKHMSLALNRTGRSIVYSCEWPLYMWP 210 + DAQTFA+WGVD+LK DGCY E A GY M+ ALN TGR IVYSC WP Y Sbjct: 121 RVEQDAQTFAEWGVDMLKLDGCYSSGKEQ-AQGYPQMARALNATGRPIVYSCSWPAYQGG 179 Query: 211 F-QKPNYTEIRQYCNHWRNFADIDDSWKSIKSILDWTSFNQERIVDVAGPGGWNDPDMLV 269 K NYT + + CN WRN+ DI DSW S+ SI+DW NQ+ + AGPG WNDPDML+ Sbjct: 180 LPPKVNYTLLGEICNLWRNYDDIQDSWDSVLSIVDWFFTNQDVLQPFAGPGHWNDPDMLI 239 Query: 270 IGNFGLSWNQQVTQMALWAIMAAPLFMSNDLRHISPQAKALLQDKDVIAINQDPLGKQGY 329 IGNFGLS+ Q +QMALW IMAAPL MS DLR ISP AK +LQ++ +I INQDPLG QG Sbjct: 240 IGNFGLSYEQSRSQMALWTIMAAPLLMSTDLRTISPSAKKILQNRLMIQINQDPLGIQGR 299 Query: 330 Q-LRQGDNFEVWERPLSGLAWAVAMINRQEIGGPRSYTIAVASLGKGVACNPACFITQLL 388 + +++G + EV+ RPLS A A+ +R+ P YT ++A LG + A + Q + Sbjct: 300 RIIKEGSHIEVFLRPLSQAASALVFFSRR-TDMPFRYTTSLAKLGFPMG---AAYEVQDV 355 Query: 389 PVKRKLGFYEWTSRLRSHINPTGTVLLQL 417 + + + INP+G V+ L Sbjct: 356 YSGKIISGLKTGDNFTVIINPSGVVMWYL 384 >4DO5-A nrPDB Length = 400 Score = 508 bits (1309), Expect = e-144, Method: Composition-based stats. Identities = 195/389 (50%), Positives = 247/389 (63%), Gaps = 9/389 (2%) Query: 32 LDNGLARTPTMGWLHWERFMCNLDCQEEPDSCISEKLFMEMAELMVSEGWKDAGYEYLCI 91 LDNGL +TP MGWL WERF CN++C E+P +CISE+LFMEMA+ M +GW+D GY YL I Sbjct: 1 LDNGLLQTPPMGWLAWERFRCNINCDEDPKNCISEQLFMEMADRMAQDGWRDMGYTYLNI 60 Query: 92 DDCWMAPQRDSEGRLQADPQRFPHGIRQLANYVHSKGLKLGIYADVGNKTCAGFPGS-FG 150 DDCW+ RD+ GRL DP+RFPHGI LA+YVHS GLKLGIYAD+GN TC G+PG+ Sbjct: 61 DDCWIG-GRDASGRLMPDPKRFPHGIPFLADYVHSLGLKLGIYADMGNFTCMGYPGTTLD 119 Query: 151 YYDIDAQTFADWGVDLLKFDGCYCDSLENLADGYKHMSLALNRTGRSIVYSCEWPLYMWP 210 DAQTFA+W VD+LK DGC+ + E A GY M+ ALN TGR I +SC WP Y Sbjct: 120 KVVQDAQTFAEWKVDMLKLDGCF-STPEERAQGYPKMAAALNATGRPIAFSCSWPAYEGG 178 Query: 211 FQ-KPNYTEIRQYCNHWRNFADIDDSWKSIKSILDWTSFNQERIVDVAGPGGWNDPDMLV 269 + Y+ + CN WRN+ DI DSW S+ SIL+W +Q+ + VAGPG WNDPDML+ Sbjct: 179 LPPRVQYSLLADICNLWRNYDDIQDSWWSVLSILNWFVEHQDILQPVAGPGHWNDPDMLL 238 Query: 270 IGNFGLSWNQQVTQMALWAIMAAPLFMSNDLRHISPQAKALLQDKDVIAINQDPLGKQGY 329 IGNFGLS Q QMALW ++AAPL MS DLR IS Q +LQ+ +I INQDPLG QG Sbjct: 239 IGNFGLSLEQSRAQMALWTVLAAPLLMSTDLRTISAQNMDILQNPLMIKINQDPLGIQGR 298 Query: 330 QLRQGDNF-EVWERPLSGLAWAVAMINRQEIGGPRSYTIAVASLGKGVACNPACFITQLL 388 ++ + + EV+ RPLS A A+ + P Y +SLG+ + Q + Sbjct: 299 RIHKEKSLIEVYMRPLSNKASALVFFS-CRTDMPYRYH---SSLGQLNFTGSVIYEAQDV 354 Query: 389 PVKRKLGFYEWTSRLRSHINPTGTVLLQL 417 + + INP+G V+ L Sbjct: 355 YSGDIISGLRDETNFTVIINPSGVVMWYL 383 >4OGZ-A nrPDB Length = 473 Score = 428 bits (1101), Expect = e-120, Method: Composition-based stats. Identities = 140/358 (39%), Positives = 200/358 (55%), Gaps = 40/358 (11%) Query: 36 LARTPTMGWLHWERFMCNLDCQEEPDSCISEKLFMEMAELMVSEGWKDAGYEYLCIDDCW 95 L TP MGW W F +L +E+L ++ A+ MV G +D GY Y+ IDD W Sbjct: 96 LLLTPPMGWNSWNTFGRHL----------TEELLLQTADAMVENGMRDLGYAYINIDDFW 145 Query: 96 MAPQRDSEGRLQADPQRFPHGIRQLANYVHSKGLKLGIYADVGNKTCAGFPGSFGYYDID 155 P+R ++G +Q D +FP GI+ +A+Y+H +G KLGIY+D +KTC G GS+GY +ID Sbjct: 146 QLPERGADGHIQIDKTKFPRGIKYVADYLHERGFKLGIYSDAADKTCGGVCGSYGYEEID 205 Query: 156 AQTFADWGVDLLKFDGCYCDSLE-NLADGYKHMSLALNRTGRSIVYS-CEWPLYMWPFQK 213 A+ FA WGVDLLK+D C + + Y+ M AL T RSIV+S CEW Q+ Sbjct: 206 ARDFASWGVDLLKYDYCNAPAGRVEAMERYEKMGRALRATDRSIVFSICEWG------QR 259 Query: 214 PNYTEIRQYCNH-WRNFADIDDSW-------KSIKSILDWTSFNQERIVDVAGPGGWNDP 265 + ++ H WR DI D W ++ IL+ N + + A PGGWNDP Sbjct: 260 EPWKWAKKVGGHLWRVSGDIGDLWNRSTDEKGGLRGILNILEINAP-LSEYARPGGWNDP 318 Query: 266 DMLVIGNF-----------GLSWNQQVTQMALWAIMAAPLFMSNDLRHISPQAKALLQDK 314 DMLV+G G + Q + ALW +MA+PL ND+R ++ +L +K Sbjct: 319 DMLVVGIGGKSKSIGYESEGCTNEQYQSHFALWCMMASPLLCGNDVRQMNDSTLQILLNK 378 Query: 315 DVIAINQDPLGKQGYQLRQGDNFEVWERPLSGLAWAVAMINRQEIGGPRSYTIAVASL 372 D+IAINQDPLG Q + + D+++VW +PLS + A+A +NR I GP + V ++ Sbjct: 379 DLIAINQDPLGIQAERAIRADHYDVWVKPLSDGSKAIACLNR--ISGPVDVELNVKTV 434 >1UAS-A nrPDB Length = 362 Score = 424 bits (1089), Expect = e-119, Method: Composition-based stats. Identities = 136/329 (41%), Positives = 193/329 (58%), Gaps = 23/329 (6%) Query: 32 LDNGLARTPTMGWLHWERFMCNLDCQEEPDSCISEKLFMEMAELMVSEGWKDAGYEYLCI 91 +NGL RTP MGW W F C ++ E++ E A+ +V+ G GY+Y+ I Sbjct: 1 FENGLGRTPQMGWNSWNHFYCGIN----------EQIIRETADALVNTGLAKLGYQYVNI 50 Query: 92 DDCWMAPQRDSEGRLQADPQRFPHGIRQLANYVHSKGLKLGIYADVGNKTCAG-FPGSFG 150 DDCW RDS+G + Q FP GI+ LA+YVH+KGLKLGIY+D G++TC+ PGS Sbjct: 51 DDCWAEYSRDSQGNFVPNRQTFPSGIKALADYVHAKGLKLGIYSDAGSQTCSNKMPGSLD 110 Query: 151 YYDIDAQTFADWGVDLLKFDGCYCDSLENLADGYKHMSLALNRTGRSIVYS-CEWPLYMW 209 + + D +TFA WGVD LK+D C D+ ++ + Y MS A+ G++I +S CEW Sbjct: 111 HEEQDVKTFASWGVDYLKYDNC-NDAGRSVMERYTRMSNAMKTYGKNIFFSLCEWG---- 165 Query: 210 PFQKPNYTEIRQYCNHWRNFADIDDSWKSIKSILDWTSFNQERIVDVAGPGGWNDPDMLV 269 ++ T + N WR DI D+W S+ S D ++ AGPGGWNDPDML Sbjct: 166 --KENPATWAGRMGNSWRTTGDIADNWGSMTSRAD----ENDQWAAYAGPGGWNDPDMLE 219 Query: 270 IGNFGLSWNQQVTQMALWAIMAAPLFMSNDLRHISPQAKALLQDKDVIAINQDPLGKQGY 329 +GN G+S + + ++WA+ APL + D+R +S Q K +L + +VIA+NQD LG QG Sbjct: 220 VGNGGMSEAEYRSHFSIWALAKAPLLIGCDVRSMSQQTKNILSNSEVIAVNQDSLGVQGK 279 Query: 330 QLRQGDNFEVWERPLSGLAWAVAMINRQE 358 +++ + EVW PLS AV + NRQ Sbjct: 280 KVQSDNGLEVWAGPLSNNRKAVVLWNRQS 308 >6F4C-B nrPDB Length = 363 Score = 422 bits (1086), Expect = e-118, Method: Composition-based stats. Identities = 144/329 (43%), Positives = 188/329 (57%), Gaps = 23/329 (6%) Query: 32 LDNGLARTPTMGWLHWERFMCNLDCQEEPDSCISEKLFMEMAELMVSEGWKDAGYEYLCI 91 L NGL RTP MGW W F CN I EK E A+ MVS G GYEY+ I Sbjct: 1 LSNGLGRTPQMGWSSWNHFACN----------IEEKEIRETADAMVSTGLASLGYEYINI 50 Query: 92 DDCWMAPQRDSEGRLQADPQRFPHGIRQLANYVHSKGLKLGIYADVGNKTCAG-FPGSFG 150 DDCW RDS+G + FP GI+ LA+YVHSKGLKLGIY+D G++TC+ GS G Sbjct: 51 DDCWAELNRDSQGNMVPKGSTFPSGIKALADYVHSKGLKLGIYSDAGSQTCSKQMTGSLG 110 Query: 151 YYDIDAQTFADWGVDLLKFDGCYCDSLENLADGYKHMSLALNRTGRSIVYS-CEWPLYMW 209 + + DA+TFA WGVD LK+D C ++ + + Y M+ AL +GR+I YS CEW Sbjct: 111 HEEQDAKTFASWGVDYLKYDNCNNEN-RSPRERYPIMAKALKNSGRAIFYSLCEWG---- 165 Query: 210 PFQKPNYTEIRQYCNHWRNFADIDDSWKSIKSILDWTSFNQERIVDVAGPGGWNDPDMLV 269 T N WR DI D+W S+ S D + AGPGGWNDPDML Sbjct: 166 --DDDPATWASSVGNSWRTTGDISDNWDSMTSRADMN----DEWASYAGPGGWNDPDMLE 219 Query: 270 IGNFGLSWNQQVTQMALWAIMAAPLFMSNDLRHISPQAKALLQDKDVIAINQDPLGKQGY 329 +GN G++ + + ++WA+ APL + DLR + A +L +K+VIA+NQD LG QG Sbjct: 220 VGNGGMTTAEYRSHFSIWALAKAPLIIGCDLRSMDQTAHEILSNKEVIAVNQDKLGVQGK 279 Query: 330 QLRQGDNFEVWERPLSGLAWAVAMINRQE 358 +++Q + EVW PLSG A+ + NR Sbjct: 280 KVKQNGDLEVWAGPLSGKRVALVLWNRSS 308 >4NZJ-A nrPDB Length = 477 Score = 418 bits (1075), Expect = e-117, Method: Composition-based stats. Identities = 139/378 (36%), Positives = 200/378 (52%), Gaps = 42/378 (11%) Query: 36 LARTPTMGWLHWERFMCNLDCQEEPDSCISEKLFMEMAELMVSEGWKDAGYEYLCIDDCW 95 L TP MGW W F +L +E+L ++ A+ M++ G +D GY Y+ IDD W Sbjct: 96 LLLTPPMGWNSWNTFGQHL----------TEELVLQTADAMITNGMRDLGYSYINIDDFW 145 Query: 96 MAPQRDSEGRLQADPQRFPHGIRQLANYVHSKGLKLGIYADVGNKTCAGFPGSFGYYDID 155 P+R ++G LQ D +FP GI+ +A+Y+H +G KLGIY+D KTC G GS+GY + D Sbjct: 146 QLPERGADGHLQIDKTKFPRGIKYVADYLHERGFKLGIYSDAAEKTCGGVCGSYGYEETD 205 Query: 156 AQTFADWGVDLLKFDGCYC--DSLENLADGYKHMSLALNRTGRSIVYS-CEWPLYMWPFQ 212 A+ FA WGVDLLK+D C D +E + + Y M AL T RSIVYS CEW Q Sbjct: 206 AKDFASWGVDLLKYDYCNAPVDRVEAM-ERYAKMGRALRATNRSIVYSVCEWG------Q 258 Query: 213 KPNYTEIRQYCNH-WRNFADIDDSW-------KSIKSILDWTSFNQERIVDVAGPGGWND 264 + + +Q H WR DI D W + IL+ N + + AGP GWND Sbjct: 259 REPWKWAKQVGGHLWRVSGDIGDIWYRDGNRVGGLHGILNILEINAP-LSEYAGPSGWND 317 Query: 265 PDMLVIG-----------NFGLSWNQQVTQMALWAIMAAPLFMSNDLRHISPQAKALLQD 313 PDMLV+G + G + Q + +LW +MA+PL ND+R+++ +L D Sbjct: 318 PDMLVVGIDGKSMSIGYESEGCTQEQYKSHFSLWCMMASPLLSGNDVRNMNDSTLKILLD 377 Query: 314 KDVIAINQDPLGKQGYQLRQGDNFEVWERPLSGLAWAVAMINRQEIGGPRSYTIAVASLG 373 D+IAINQD LG+Q + + D++++W +PL+ AVA NR P++ + ++ Sbjct: 378 PDLIAINQDVLGRQAERSIRSDHYDIWVKPLADGRKAVACFNRAS--SPQTVILNENTIA 435 Query: 374 KGVACNPACFITQLLPVK 391 C L Sbjct: 436 DLSFEQIYCLDNHLTKSG 453 >3A5V-A nrPDB Length = 397 Score = 385 bits (988), Expect = e-107, Method: Composition-based stats. Identities = 125/414 (30%), Positives = 199/414 (48%), Gaps = 40/414 (9%) Query: 33 DNGLARTPTMGWLHWERFMCNLDCQEEPDSCISEKLFMEMAELMVSEGWKDAGYEYLCID 92 +NGLA TP MGW W ++ CN+D E+L ++ A+ + S G KD GY Y+ ID Sbjct: 2 NNGLAITPQMGWNTWNKYGCNVD----------EQLILDAAKAIASSGLKDLGYNYVIID 51 Query: 93 DCWMAPQRDSEGRLQADPQRFPHGIRQLANYVHSKGLKLGIYADVGNKTCAGFPGSFGYY 152 DCW +R+S L ADP +FP GI+ L + +H+ GLK GIY+ G TC G S GY Sbjct: 52 DCWQKNERESSKTLLADPTKFPRGIKPLVDDIHNLGLKAGIYSSAGTLTCGGHIASLGYE 111 Query: 153 DIDAQTFADWGVDLLKFDGCYCDSLENLA----DGYKHMSLALNRTGRSIVYS-CEWPLY 207 DIDA+T+A WG+D LK+D CY D YK M ALN+TGR ++YS C W Sbjct: 112 DIDAKTWAKWGIDYLKYDNCYNQGQSGTPKLSYDRYKAMGNALNKTGRPMLYSLCNWG-- 169 Query: 208 MWPFQKPNYTEIRQYCNHWRNFADIDDSWKSIKSILDWTSFN----------------QE 251 + + N WR D+ D++ T+++ Sbjct: 170 ----EDGPWNFASTISNSWRISGDVYDNFNRPDPACPCTTYDCVLAGFRCSVMNIINKAV 225 Query: 252 RIVDVAGPGGWNDPDMLVIGNFGLSWNQQVTQMALWAIMAAPLFMSNDLRHISPQAKALL 311 + A GGWND DML +GN G++ + +WA + +PL + ND+ +I+ K ++ Sbjct: 226 AVSQKARSGGWNDLDMLEVGNGGMNQEEYRVHYTIWAALKSPLILGNDVTNITNTTKEII 285 Query: 312 QDKDVIAINQDPLGKQGYQLRQGDNFEVWERPLSGLAWAVAMINRQEIGGPRSYTI-AVA 370 +K+VIA+NQD ++ + +++ L+ V ++N + + T + Sbjct: 286 MNKEVIAVNQDSSFSPANRIWVKGDQQLFSGNLANNTQVVILLNAGDSAAKMTATWDDIW 345 Query: 371 SLGKGVACNPACFITQLLPVKRKLGFYEWTSRLRSHINPTGTVLLQLENTMQMS 424 + + L ++ LG + ++ + + G LL+ ++ S Sbjct: 346 VYNLPNVDSSRSIEVRDLWKQKSLGNF--SNHITLDVPAHGVRLLKFMDSATSS 397 >3LRL-A nrPDB Length = 479 Score = 380 bits (976), Expect = e-106, Method: Composition-based stats. Identities = 115/367 (31%), Positives = 176/367 (47%), Gaps = 50/367 (13%) Query: 34 NGLARTPTMGWLHWERFMCNLDCQEEPDSCISEKLFMEMAELMVSEGWKDAGYEYLCIDD 93 NGL TP MGW +W F C+ +SE+L ++ A+ + G KD GY+Y+ +DD Sbjct: 24 NGLGLTPQMGWDNWNTFACD----------VSEQLLLDTADRISDLGLKDMGYKYIILDD 73 Query: 94 CWMAPQRDSEGRLQADPQRFPHGIRQLANYVHSKGLKLGIYADVGNKTCAGFPGSFGYYD 153 CW + RDS+G L AD Q+FP+G+ +A+++H+ G+Y+ G TCAG+PGS G + Sbjct: 74 CW-SSGRDSDGFLVADEQKFPNGMGHVADHLHNNSFLFGMYSSAGEYTCAGYPGSLGREE 132 Query: 154 IDAQTFADWGVDLLKFDGCYCD----SLENLADGYKHMSLALNRTGRSIVYS-CEWPLYM 208 DAQ FA+ VD LK+D CY + E YK MS ALN+TGR + YS C W Sbjct: 133 EDAQFFANNRVDYLKYDNCYNKGQFGTPEISYHRYKAMSDALNKTGRPVFYSLCNWG--- 189 Query: 209 WPFQKPNYTEIRQYCNHWRNFADIDDSWKSIKSILDWT------------------SFNQ 250 Q + N WR D+ + S Sbjct: 190 ---QDLTFYWGSGIANSWRMSGDVTAEFTRPDSRCPCDGDEYDCKYAGFHCSIMNILNKA 246 Query: 251 ERIVDVAGPGGWNDPDMLVIGNFGLSWNQQVTQMALWAIMAAPLFMSNDLRHISPQAKAL 310 + AG GGWND D L +G L+ +++ ++WA++ +PL + ++ ++ + ++ Sbjct: 247 APMGQNAGVGGWNDLDNLEVGVGNLTDDEEKAHFSMWAMVKSPLIIGANVNNLKASSYSI 306 Query: 311 LQDKDVIAINQDPLGKQG-----YQLRQGDNF-----EVWERPLSGLAWAVAMINRQEIG 360 VIAINQD G Y + D + ++W PL VA++N + Sbjct: 307 YSQASVIAINQDSNGIPATRVWRYYVSDTDEYGQGEIQMWSGPLDNGDQVVALLNGGSVS 366 Query: 361 GPRSYTI 367 P + T+ Sbjct: 367 RPMNTTL 373 >3A22-A nrPDB Length = 614 Score = 342 bits (877), Expect = 2e-94, Method: Composition-based stats. Identities = 113/392 (28%), Positives = 176/392 (44%), Gaps = 36/392 (9%) Query: 41 TMGWLHWERFMCNLDCQEEPDSCISEKLFMEMAELMVSEGWKDAGYEYLCIDDCWMAPQR 100 MGW W F +D + + + V+ G AGY Y+ ID+ W R Sbjct: 13 PMGWASWNSFAAKID----------YSVIKKQVDAFVAAGLPAAGYTYINIDEGWWQGTR 62 Query: 101 DSEGRLQADPQRFPHGIRQLANYVHSKGLKLGIYADVGNKTCAGF----------PGSFG 150 DS G + D +P G+ + Y+HSKGLK GIY D G C + GS G Sbjct: 63 DSAGNITVDTAEWPGGMSAITAYIHSKGLKAGIYTDAGKDGCGYYYPTGRPAAPGSGSEG 122 Query: 151 YYDIDAQTFADWGVDLLKFDGCYCDSLE-NLADGYKHMSLALNRTGRSIVYSCEWPLYMW 209 +YD D F+ WG D +K D C D+ + A YK +S A+ R + + W Sbjct: 123 HYDQDMLQFSTWGFDFVKVDWCGGDAEGLDAATTYKSISDAVGRAAATTGRPLTLSICNW 182 Query: 210 PFQKPNYTEIRQYCNHWRNFADI--DDSWKSIKSILDWTSFNQERIVDVAGPGGWNDPDM 267 +Q + WR DI + S+ S+L ++F+Q G +NDPDM Sbjct: 183 GYQN-PWNWAAGQAPLWRTSTDIIYYGNQPSMTSLL--SNFDQTLHPTAQHTGYYNDPDM 239 Query: 268 LVIGNFGLSWNQQVTQMALWAIMAAPLFMSNDLRHISPQAKALLQDKDVIAINQDPLGKQ 327 L++G G + Q T M LWAI APL NDL ++ + +L++ +VIA++QD G Q Sbjct: 240 LMVGMDGFTAAQNRTHMNLWAISGAPLLAGNDLTTMTSETAGILKNPEVIAVDQDSRGLQ 299 Query: 328 GYQLRQ-GDNFEVWERPLSG-LAWAVAMINRQEIGGPRSYTIAVASLGKGVACNPACFIT 385 G ++ + + + + LSG AV ++NR T+ + LG A Sbjct: 300 GVKVAEDTTGLQAYGKVLSGTGNRAVVLLNRTSAA--HDITVRWSDLGLTNASATV---- 353 Query: 386 QLLPVKRKLGFYEWTSRLRSHINPTGTVLLQL 417 + L ++ +G + + + G+V+L + Sbjct: 354 RDLWARQNVG--TSATGYTASVPAGGSVMLTV 383 >4NZF-A nrPDB Length = 448 Score = 329 bits (844), Expect = 1e-90, Method: Composition-based stats. Identities = 108/449 (24%), Positives = 169/449 (37%), Gaps = 98/449 (21%) Query: 37 ARTPTMGWLHWERFMCNLDCQEEPDSCISEKLFMEMAELMVSEGWKDAGYEYLCIDDCWM 96 A+TP MGW W DC + ++E AE M + K G+EY+ +D W Sbjct: 22 AKTPPMGWNSW-------DCY---GASVTEDEVKGNAEYMA-KYLKPFGWEYVVVDIQWY 70 Query: 97 AP-------------QRDSEGRLQADPQRFPH-----GIRQLANYVHSKGLKLGIYADVG 138 P + D RL RFP G + LA+Y+H+ GLK GI+ G Sbjct: 71 EPGANSSIYRPFVPLEMDEYSRLMPAVNRFPSAKGGKGFKPLADYIHNLGLKFGIHIMRG 130 Query: 139 -------------------------NKTCAGFPGSFG----------YYDIDAQTFADWG 163 N C +G YYD Q +A WG Sbjct: 131 IPRQAVHQNTPILGTNVGARDIADTNSICPWNTDMYGVDHRKEGAQAYYDSLFQLYAQWG 190 Query: 164 VDLLKFDGCYCDSLEN-LADGYKHMSLALNRTGRSIVYSCEWPLYMWPFQKPNYTEIRQY 222 VD +K L + K + A++R GR IV S L P + T + Sbjct: 191 VDFVKVADIVASKLYGTHTEEIKMIRKAIDRCGRPIVLS----LSPGPAPLDHATLFVEN 246 Query: 223 CNHWRNFADIDDSWKSIKSILDWTSFNQERIVDVAGPGGWNDPDMLVIGNFGL------- 275 N WR D D W+ + + + + + G G W D DML +G+ G+ Sbjct: 247 ANMWRMTDDFWDRWELLYDMFEQC----YKWCKLVGLGHWPDADMLPLGHIGIRSVDGGG 302 Query: 276 -------SWNQQVTQMALWAIMAAPLFMSNDLRHISPQAKALLQDKDVIAINQDPLGKQG 328 + ++Q T M LW I +PL +LR +LL +++V+ ++Q+ G Sbjct: 303 TDRMTRFTKDEQRTMMTLWIIFRSPLMFGGELRDNDEWTLSLLTNEEVLHVHQNGYG--A 360 Query: 329 YQLRQGDNFEVWERPLSGLAWAVAMINRQEIGGPRSYTIAVASLGKGVACNPACFITQLL 388 Q+ + ++ VW + VAM N E S ++ + + + L Sbjct: 361 RQVYRENDHVVWTSQDAEGNQFVAMFNISEKRSVVSVSLKDLGCMEPM-------KARDL 413 Query: 389 PVKRKLGFYEWTSRLRSHINPTGTVLLQL 417 K LG + + P ++L++L Sbjct: 414 WAKEDLGLVKHQLAFE--LGPHQSILVKL 440 >1T0O-A nrPDB Length = 417 Score = 324 bits (830), Expect = 6e-89, Method: Composition-based stats. Identities = 127/415 (30%), Positives = 173/415 (41%), Gaps = 76/415 (18%) Query: 33 DNGLARTPTMGWLHWERFMCNLDCQEEPDSCISEKLFMEMAELMVSEGWKDAGYEYLCID 92 D + P++GW W + C++D E F+ AEL+VS G DAGY Y+ ID Sbjct: 5 DGVTGKVPSLGWNSWNAYHCDID----------ESKFLSAAELIVSSGLLDAGYNYVNID 54 Query: 93 DCWMAPQRDSEGRLQADPQRFPHGIRQLANYVHSKGLKLGIYADVGNKTCAGFPGSFGYY 152 DCW +G + + RFP GI LA VH+ GLKLGIY+ G TCAG+P S GY Sbjct: 55 DCWSMKDGRVDGHIAPNATRFPDGIDGLAKKVHALGLKLGIYSTAGTATCAGYPASLGYE 114 Query: 153 DIDAQTFADWGVDLLKFDGC--------------------------------------YC 174 D+DA FADWGVD LK+D C Y Sbjct: 115 DVDAADFADWGVDYLKYDNCNVPSDWQDEYVACNPDFVKTGPNGTCTTALDPTLAPPGYD 174 Query: 175 DSLENLADGYKHMSLALNRTGRSIVYS-CEWPLYMWPFQKPNYTEIRQYCNHWRNFADID 233 S A+ + M AL + IV S C W Q ++ WR DI Sbjct: 175 WSTSKSAERFGAMRNALAKQSHEIVLSMCIWG------QADVFSWGNSTGISWRMSDDIS 228 Query: 234 DSWKSIKSILDWTSFNQERIVDVAGPGGWNDPDMLVIGNFGLSWNQQVTQMALWAIMAAP 293 +W S+ IL+ SF + D G ND DML +GN L+ + T ALWA M +P Sbjct: 229 PNWGSVTRILNLNSFKLNSV-DFWGH---NDADMLEVGNGNLTAAETRTHFALWAAMKSP 284 Query: 294 LFMSNDLRHISPQAKALLQDKDVIAINQDPLGKQGYQLRQ-----------GDNFEVWER 342 L + DL +S LL++K ++A NQD + Q + E W Sbjct: 285 LLIGTDLAQLSQNNINLLKNKHLLAFNQDSVYGQPATPYKWGINPDWTFNVTYPAEFWAG 344 Query: 343 PLSGLAWAVAMINRQEIGGPRSYTIAVASLGKGVACNPACFITQLLPVKRKLGFY 397 P S V M+N +I A + + + + + + LG Sbjct: 345 P-SSKGHLVLMVNTLDI-----TATKEAKWNEIPGLSAGHYEVRDVWSDKDLGCL 393 >3CC1-A nrPDB Length = 433 Score = 303 bits (777), Expect = 8e-83, Method: Composition-based stats. Identities = 97/449 (21%), Positives = 162/449 (36%), Gaps = 96/449 (21%) Query: 37 ARTPTMGWLHWERFMCNLDCQEEPDSCISEKLFMEMAELMVSEGWKDAGYEYLCIDDCWM 96 A TP MGW W DC + ++E+ + AE M + K G+EY+ +D W Sbjct: 9 ALTPPMGWNSW-------DCY---GASVTEEEVLGNAEYMANH-LKKYGWEYIVVDIQWY 57 Query: 97 APQ-------------RDSEGRLQADPQRFPH-----GIRQLANYVHSKGLKLGIYADVG 138 P D GRL RFP G + L++ +H GLK GI+ G Sbjct: 58 EPTANSSAYNPFAPLCMDEYGRLLPATNRFPSAKNGAGFKPLSDAIHDLGLKFGIHIMRG 117 Query: 139 -------------------------NKTCAGFPGSFG----------YYDIDAQTFADWG 163 N C +G YY+ + +A WG Sbjct: 118 IPRQAVYENSPVLGSTKTAREIAHTNSICPWNTDMYGVDPTKEGAQSYYNSLFELYAQWG 177 Query: 164 VDLLKFDGCYCDSL-ENLADGYKHMSLALNRTGRSIVYSCEWPLYMWPFQKPNYTEIRQY 222 VD +K D L + + K + A+ GR +V S L P + Sbjct: 178 VDFVKVDDIAASRLYDTHLEEIKMIQRAIQACGRPMVLS----LSPGPAPIKYAHHFKTN 233 Query: 223 CNHWRNFADIDDSWKSIKSILDWTSFNQERIVDVAGPGGWNDPDMLVIGNFGL------- 275 N WR D D W + + + ++ I G G W D ML +G+ G+ Sbjct: 234 ANMWRITDDFWDDWSLLYQMFERCEVWEKHI----GTGHWPDCGMLPLGHIGIRSVDGPG 289 Query: 276 -------SWNQQVTQMALWAIMAAPLFMSNDLRHISPQAKALLQDKDVIAINQDPLGKQG 328 + ++Q+T M LWAI +PL +LR +LL ++ +++INQ Sbjct: 290 GDRWTRFTKDEQLTMMNLWAICHSPLMFGGELRDNDEWTLSLLTNEGILSINQKS--VLN 347 Query: 329 YQLRQGDNFEVWERPLSGLAWAVAMINRQEIGGPRSYTIAVASLGKGVACNPACFITQLL 388 + + ++ W VA+ N + + + + + + V + Sbjct: 348 RFVYREEDKVAWAANGRNGEAYVALFNLHDQQKTLQFRLDMVGIMETV-------QLFNV 400 Query: 389 PVKRKLGFYEWTSRLRSHINPTGTVLLQL 417 + L + + + P +++L+L Sbjct: 401 WDRSFLQSLAPSESFQIELKPHQSMMLKL 429 >5AWQ-A nrPDB Length = 610 Score = 75.9 bits (185), Expect = 4e-14, Method: Composition-based stats. Identities = 80/444 (18%), Positives = 138/444 (31%), Gaps = 92/444 (20%) Query: 47 WERFMCNLDCQEEPDSCISEKLFMEMAELMVSEGWKDAGYEYLCIDDCWMAPQRDSEGR- 105 W + ++ I E + + + + D GY+ C D W+ + G Sbjct: 41 WNIYG----YSFPHNAPIPENEWKVNIDWLAGN-FADFGYDIACTD-GWIEGSSRTTGNG 94 Query: 106 -LQADPQRFPHGIRQLANYVHSKGLKLGIYADV----------GNKTCAGFP-------- 146 + + + H ANY+ ++ +KLG+Y + +KT G P Sbjct: 95 YITSYNDSWQHDWAYWANYLAARKMKLGVYYNPLWVHRAAVEDASKTVLGRPDVKIADLV 154 Query: 147 -----------------------GSFGYYDIDAQTFADWGVDLLKFDGCYCDSLENLADG 183 G+ Y + F D GV L+ D + Sbjct: 155 VPGDFFARDIGGNQLYWLDVTKSGAKEYVQGYVRYFKDLGVPYLRIDFL-SWYEDGRDAN 213 Query: 184 YKHMSLALNRTGRSIVYSCEWPLY----------MWPFQKPNYTEIRQYCNHWRNFADID 233 ++ R + S FQ + + R AD D Sbjct: 214 IGQVNAPHGRANYELALSWINEAAGEDMEVSLVMPHMFQDGSAELA--NGDLVRINADAD 271 Query: 234 -DSWKSIKSI-LDWTSFNQERIVDVAGPGGWN----------DPDMLVIGNFGLSWNQQV 281 W + + +W G GW+ D D + F S ++ Sbjct: 272 KGGWDRLSGMRQNWQDAWPNWANPFCGFTGWSHRNGRGQLILDGDFMRASTFA-SDEERK 330 Query: 282 TQMALWAIMAAPLFMSNDLRHISPQAKALLQDKDVIAINQDPL-GKQGYQLRQ------- 333 T M L +PL +++ + I A + +K+V+ +N D L GK Y+ Sbjct: 331 TMMNLMVAAGSPLAIADTYQQIGNNAW-VYTNKEVLQLNADGLVGKPLYRSATPFSKDPG 389 Query: 334 GDNFEVWERPLSGLAWAVAMINRQEIGGPRSYTIAVASLGKGVACNPACFITQLLPVKRK 393 + E W L +W VA+ NR + LG N + L R Sbjct: 390 SRDTERWAGQLPDGSWGVALFNRSDTETVTKTIDFAKDLGLATGGN-----VRDLWEHRN 444 Query: 394 LGFYEWTSRLRSHINPTGTVLLQL 417 LG SR + + P + + ++ Sbjct: 445 LGM---DSRATAALAPHASAIFRV 465 >2XN1-A nrPDB Length = 732 Score = 75.1 bits (183), Expect = 6e-14, Method: Composition-based stats. Identities = 21/84 (25%), Positives = 37/84 (44%), Gaps = 8/84 (9%) Query: 54 LDCQEEPDSCISEKLFMEMAELMVSEGWKDAGYEYLCIDDCWMAPQRDSEGRL---QADP 110 ++ E +E + + K G E +DD W + D L + Sbjct: 337 VNNWEATYFDFNEDKLKTIVDKA-----KKLGLEMFVLDDGWFGHRDDDNSSLGDWKVYK 391 Query: 111 QRFPHGIRQLANYVHSKGLKLGIY 134 ++FP+G+ A+YVH +GLK G++ Sbjct: 392 KKFPNGLGHFADYVHEQGLKFGLW 415 >3MI6-A nrPDB Length = 745 Score = 59.7 bits (143), Expect = 2e-09, Method: Composition-based stats. Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 3/56 (5%) Query: 82 KDAGYEYLCIDDCWMAPQRDSEGRL---QADPQRFPHGIRQLANYVHSKGLKLGIY 134 K G E +DD W + D L D ++FP GI + VH +G+K G++ Sbjct: 357 KRLGIEMFVLDDGWFGHRDDDTTSLGDWFVDQRKFPDGIEHFSQAVHQQGMKFGLW 412 >4FNP-A nrPDB Length = 729 Score = 50.5 bits (119), Expect = 1e-06, Method: Composition-based stats. Identities = 18/93 (19%), Positives = 38/93 (40%), Gaps = 18/93 (19%) Query: 45 LHWERFMCNLDCQEEPDSCISEKLFMEMAELMVSEGWKDAGYEYLCIDDCWMAPQRDSEG 104 +WE + + ++ + +E + G E + +DD W + D Sbjct: 334 NNWEATYFDFNEEKIVNIARTE---------------AELGIELVVLDDGWFGERDDDRR 378 Query: 105 RL---QADPQRFPHGIRQLANYVHSKGLKLGIY 134 L + ++ P+G+ LA V+ GL+ G++ Sbjct: 379 SLGDWIVNRRKLPNGLDGLAKQVNELGLQFGLW 411 >2YFN-A nrPDB Length = 720 Score = 47.4 bits (111), Expect = 1e-05, Method: Composition-based stats. Identities = 14/58 (24%), Positives = 26/58 (44%), Gaps = 3/58 (5%) Query: 82 KDAGYEYLCIDDCWMAPQRDSEGRL---QADPQRFPHGIRQLANYVHSKGLKLGIYAD 136 G + + +DD W + D L Q + + + +L VH +G+K GI+ + Sbjct: 356 ASLGIDMVVMDDGWFGKRNDDNSSLGDWQVNETKLGGSLAELITRVHEQGMKFGIWIE 413 >3A24-A nrPDB Length = 641 Score = 35.5 bits (80), Expect = 0.052, Method: Composition-based stats. Identities = 36/167 (21%), Positives = 58/167 (34%), Gaps = 37/167 (22%) Query: 22 VSWDIPGARALDNGLARTPTMGWLHWERFMCNLDCQEEPDSCISEKLFMEMAELMVSEGW 81 +SW PG A W W + + + + K +++ A Sbjct: 279 LSWIKPGKVA------------WDWWNDWNLDGVDFVTGVNNPTYKAYIDFASA------ 320 Query: 82 KDAGYEYLCIDDCWMAPQRDSEGRLQADPQRFPHGI--RQLANYVHSKGLKLGIYADVGN 139 G EY+ +D+ W LQAD + I ++L +Y SK +VG Sbjct: 321 --NGIEYVILDEGWAV-------NLQADLMQVVKEIDLKELVDYAASK--------NVGI 363 Query: 140 KTCAGFPGSFGYYDIDAQTFADWGVDLLKFDGCYCDSLENLADGYKH 186 AG+ + + +A+ GV K D D E A Y+ Sbjct: 364 ILWAGYHAFERDMENVCRHYAEMGVKGFKVDFMDRDDQEMTAFNYRA 410 >5M0X-A nrPDB Length = 575 Score = 34.7 bits (78), Expect = 0.075, Method: Composition-based stats. Identities = 19/93 (20%), Positives = 29/93 (31%), Gaps = 9/93 (9%) Query: 40 PTMGWLHWERFMCNLDCQEEPDSCISEKLFMEMAELMVSEGWKDAGYEYLCIDDCWMAPQ 99 P M + +W + + LD ++ LF + GY Y ID + Sbjct: 307 PKMAYRNWNKKIYALDLSKDEVLNWLFDLF---------SSLRKMGYRYFKIDFLFAGAV 357 Query: 100 RDSEGRLQADPQRFPHGIRQLANYVHSKGLKLG 132 + Q F GI + V LG Sbjct: 358 PGERKKNITPIQAFRKGIETIRKAVGEDSFILG 390 >6GN6-A nrPDB Length = 447 Score = 34.3 bits (77), Expect = 0.097, Method: Composition-based stats. Identities = 20/84 (23%), Positives = 31/84 (36%), Gaps = 9/84 (10%) Query: 50 FMCNLDCQEEPDSCISEKLFMEMAELMVSEGWKDAGYEYLCIDDCWMAPQRDSEG---RL 106 F L + ++ L E A+ +EG K G+ Y ID W P + G Sbjct: 110 FDSALTDYKATNTPAGRDLIREYADAFRAEGLK-VGFYYSIID--WHHPDYPAYGDRQHP 166 Query: 107 QADPQRF---PHGIRQLANYVHSK 127 D F P + +Y+H + Sbjct: 167 MRDNAEFKDRPQDFNRYLDYMHGQ 190 >5L3D-A nrPDB Length = 852 Score = 33.1 bits (74), Expect = 0.26, Method: Composition-based stats. Identities = 21/138 (15%), Positives = 53/138 (38%), Gaps = 20/138 (14%) Query: 180 LADGYKHMSLALNRTGRSIVYSCEWPLYMWPF----QKPNYTEIRQYCNHWRNFADIDDS 235 A G + +++ T ++ +Y C+ L P Q+P + W+ A Sbjct: 596 TASGCEVIAVNTRSTSQTFIYKCDAVLCTLPLGVLKQQPPAVQFVPPLPEWKTSAVQRMG 655 Query: 236 WKSIKSILDWTSFNQERIVDVAGPGGWNDPDMLVIGNFGLSWNQQVTQMALWAIMAAPLF 295 + ++ ++ F++ DP + + G+ G + + W + AP+ Sbjct: 656 FGNLNKVVLC--FDRVFW----------DPSVNLFGHVGSTTASRGELFLFWNLYKAPIL 703 Query: 296 MSNDLRHISPQAKALLQD 313 L ++ +A ++++ Sbjct: 704 ----LALVAGEAAGIMEN 717 >3ABT-A nrPDB Length = 662 Score = 33.1 bits (74), Expect = 0.26, Method: Composition-based stats. Identities = 21/138 (15%), Positives = 53/138 (38%), Gaps = 20/138 (14%) Query: 180 LADGYKHMSLALNRTGRSIVYSCEWPLYMWPF----QKPNYTEIRQYCNHWRNFADIDDS 235 A G + +++ T ++ +Y C+ L P Q+P + W+ A Sbjct: 425 TASGCEVIAVNTRSTSQTFIYKCDAVLCTLPLGVLKQQPPAVQFVPPLPEWKTSAVQRMG 484 Query: 236 WKSIKSILDWTSFNQERIVDVAGPGGWNDPDMLVIGNFGLSWNQQVTQMALWAIMAAPLF 295 + ++ ++ F++ DP + + G+ G + + W + AP+ Sbjct: 485 FGNLNKVVLC--FDRVFW----------DPSVNLFGHVGSTTASRGELFLFWNLYKAPIL 532 Query: 296 MSNDLRHISPQAKALLQD 313 L ++ +A ++++ Sbjct: 533 ----LALVAGEAAGIMEN 546 >1VBH-A nrPDB Length = 876 Score = 31.6 bits (70), Expect = 0.69, Method: Composition-based stats. Identities = 26/120 (21%), Positives = 39/120 (32%), Gaps = 22/120 (18%) Query: 58 EEPDSCISEKLFMEMAELMV--SEGWKDAGYEYLCIDDCWMAPQRDSEGRLQADPQRF-- 113 E P + + E AE + + Y D P ++G LQ DP Sbjct: 750 EIPRAALVADEIAEQAEFFSFGTNDLTQMTFGYSRDDVGKFIPVYLAQGILQHDPFEVLD 809 Query: 114 PHGIRQLANYVHSKG------LKLGIYADVGNKTCAGFPGSFGYYDIDAQTFADWGVDLL 167 G+ +L + +G LK+GI G G FA G+D + Sbjct: 810 QRGVGELVKFATERGRKARPNLKVGI------------CGEHGGEPSSVAFFAKAGLDYV 857 >3L2M-A nrPDB Length = 496 Score = 31.2 bits (69), Expect = 0.84, Method: Composition-based stats. Identities = 16/105 (15%), Positives = 37/105 (35%), Gaps = 20/105 (19%) Query: 23 SWDIPGARALDNGLARTPTMGWLHWERFMCNLDCQEEPDSCISEKLFMEMAELMVSEGWK 82 +WD ++G +T + G + DCQ ++ L + M+++ Sbjct: 133 AWD------FNDGKCKTASGGIESYNDPYQVRDCQLVGLLDLA--LEKDYVRSMIADYLN 184 Query: 83 DAGYEYLCIDDCWMAPQRDSEGRLQADPQRFPHGIRQLANYVHSK 127 ID + D+ + +P I+ + + +H+ Sbjct: 185 KL------IDIGVAGFRIDASKHM------WPGDIKAVLDKLHNL 217 >5KDW-A nrPDB Length = 885 Score = 30.8 bits (68), Expect = 1.0, Method: Composition-based stats. Identities = 47/276 (17%), Positives = 80/276 (28%), Gaps = 73/276 (26%) Query: 85 GYEYLCIDDCWMAPQRDSEGRLQADPQRF---PHGIRQLANYVHSKGL-KLGIYADVGNK 140 G +++ +D + G Q + P G + H+ + +L +Y Sbjct: 620 GTQHINVD-QYAQCGGGCSGN--PYDQTWGLNPRGWGESHELGHNLQVNRLKVY------ 670 Query: 141 TCAGFPGSFGYYDIDAQTFADWGV----------DLLKFDGCYCDSLENLADG------Y 184 G G + DW V + + Y + A+ Y Sbjct: 671 --GGRSGEIS--NQIFPLHKDWRVLREFGQNLDDTRVNYRNAYNLIVAGRAEADPLAGVY 726 Query: 185 KHM-----SLALNRTGRSIVYSCEWPLYMWPFQKPN---YTEIRQYCNHWRNFADIDDSW 236 K + + ALN G + + +W Y + + H R W Sbjct: 727 KRLWEDPGTYALN--GERMAFYTQWVHYWADLKNDPLQGWDIWTLLYLHQRQVD--KSDW 782 Query: 237 KSIKSILDWTSFNQERIVDVAGPGGWNDP------DMLVIGNFGLSWNQQVTQMALWAIM 290 + K+ L + ++ Q PG D D L++G L+ Q ALW I Sbjct: 783 DANKAALGYGTYAQ-------RPGNSGDASSTDGNDNLLLGLSWLTQRDQRPTFALWGIR 835 Query: 291 AA---------------PLFMSNDLRHISPQAKALL 311 + P F + R LL Sbjct: 836 TSAAAQAQVAAYGFAEQPAFFYANNRTNEYSTVKLL 871 >3HDB-A nrPDB Length = 417 Score = 30.1 bits (66), Expect = 1.9, Method: Composition-based stats. Identities = 11/26 (42%), Positives = 13/26 (50%) Query: 125 HSKGLKLGIYADVGNKTCAGFPGSFG 150 H G LGI+ D G C G+P G Sbjct: 141 HEMGHNLGIHHDDGYCYCGGYPCIMG 166 >4BWI-A nrPDB Length = 432 Score = 30.1 bits (66), Expect = 1.9, Method: Composition-based stats. Identities = 29/119 (24%), Positives = 44/119 (36%), Gaps = 12/119 (10%) Query: 286 LWAIMAAPLFMSNDLRHISPQAKALLQDKDVIAINQDPLGKQGYQLRQGDNFEVWERPLS 345 LW IMA + ALL + +AI Q L +Q +Q +V E + Sbjct: 153 LWGIMAVHHSKPRRFTEQEWETMALLSKEVSLAITQSQLSRQVHQ------QQVQEALVQ 206 Query: 346 GLAWAVAMINRQEIGGPRSYTIAVASLGKGV-ACNPACFITQLLPVKRKLGFYEWTSRL 403 L VA P ++ A+ ++G+ V A +I L Y+W R Sbjct: 207 RLETTVAQYG----DRPETWQYALETVGQAVEADGAVLYIAPDL-TGSVAQHYQWNLRF 260 >1TYY-A nrPDB Length = 339 Score = 29.7 bits (65), Expect = 2.4, Method: Composition-based stats. Identities = 6/41 (14%), Positives = 15/41 (36%) Query: 225 HWRNFADIDDSWKSIKSILDWTSFNQERIVDVAGPGGWNDP 265 W N +I + ++ + + + ++G W D Sbjct: 185 MWGNTDEIPELIARSAALASICKVSADELCQLSGASHWQDA 225 >1DPE-A nrPDB Length = 507 Score = 29.7 bits (65), Expect = 2.4, Method: Composition-based stats. Identities = 28/165 (16%), Positives = 48/165 (29%), Gaps = 20/165 (12%) Query: 171 GCYCDSLENLADGYKHMSLALNRTGRSIVYSCEWPLYMWPFQKPNYTEIRQYCNHWRNFA 230 Y D +++ + L G +S L+ P Q+P N R Sbjct: 315 WGYNDDVQDYTYDPEKAKALLKEAGLEKGFSI--DLWAMPVQRPY------NPNARRMAE 366 Query: 231 DIDDSWKSIKSILDWTSFNQERIVDVAGPG-------GWN----DPDMLVIGNFGLSWNQ 279 I W + ++ + A G GW DPD F + ++ Sbjct: 367 MIQADWAKVGVQAKIVTYEWGEYLKRAKDGEHQTVMMGWTGDNGDPDNFFATEFSCAASE 426 Query: 280 QVTQMALWAIMA-APLFMSNDLRHISPQAKALLQDKDVIAINQDP 323 Q + + W L + L + V+ +Q P Sbjct: 427 QGSNYSKWCYKPFEDLIQPARATDDHNKRVELYKQAQVVMHDQAP 471 >5XFM-A nrPDB Length = 642 Score = 29.3 bits (64), Expect = 3.2, Method: Composition-based stats. Identities = 27/132 (20%), Positives = 44/132 (33%), Gaps = 25/132 (18%) Query: 83 DAGYEYLCIDDCW---MAPQRDSEGRLQADPQRFPHGIRQLANYVHSKGLKLGI-YADVG 138 GYEY ID+ W + QR ++ L Y KG++L + Y+ G Sbjct: 323 AMGYEYALIDNWWDTRIGHQR----------------MKSLVEYARDKGVELFLWYSSSG 366 Query: 139 -----NKTCAGFPGSFGYYDIDAQTFADWGVDLLKFDGCYCDSLENLADGYKHMSLALNR 193 + + + + GV +K D D E + +S A + Sbjct: 367 YWNDIEQGPVNRMDNAIIRKREMKWLQSLGVKGIKVDFFGGDKQETMRLYEDILSDADDH 426 Query: 194 TGRSIVYSCEWP 205 I + C P Sbjct: 427 GLMVIFHGCTLP 438 >5F1Q-A nrPDB Length = 543 Score = 29.3 bits (64), Expect = 3.3, Method: Composition-based stats. Identities = 25/129 (19%), Positives = 37/129 (28%), Gaps = 19/129 (14%) Query: 171 GCYCDSLENLADGYKHMSLALNRTGRSIVYSCEWPLYMWPFQKPNYTEIRQYCNHWRNFA 230 Y D +++ A L G +S L+ P Q+P N R Sbjct: 343 WGYNDDVKDYAYDPAKAKELLKEAGLPDGFSI--DLWAMPVQRPY------NPNARRMAE 394 Query: 231 DIDDSWKSIKSILDWTSFNQERIVDVAGPG-------GWN----DPDMLVIGNFGLSWNQ 279 I W I ++ + A G GW DPD F + Sbjct: 395 MIQSDWAKIGVKAKIVTYEWGEYLKRAKDGEHETVMMGWTGDNGDPDNFFATLFSCDAAK 454 Query: 280 QVTQMALWA 288 Q + + W Sbjct: 455 QGSNYSKWC 463 >5HHA-A nrPDB Length = 286 Score = 28.9 bits (63), Expect = 4.4, Method: Composition-based stats. Identities = 26/154 (16%), Positives = 46/154 (29%), Gaps = 18/154 (11%) Query: 118 RQLANYVHSKGLKLGIYADVGNKTC-AGFPGSFGYYDIDAQTFADWGVDLLKFDGCYCDS 176 +L Y+ + G+KL + C AG P Y + A VD Sbjct: 87 GELDAYLKATGVKLADGDTRPGRECIAGKP----RYQQGPRQPAV-CVDYNDVKNYAAWL 141 Query: 177 LENLADGYKHMSLALNRTGRSIVYSCEWPLYMWPFQKPNYTEIRQYCNHWRNFADIDDSW 236 + Y+ +S A G + + +PF + I ++ N + ++ Sbjct: 142 SKKTGKRYRMLSEAEREYGA---RAGSAGPFPFPFDEGKEYSIAKHANTYGASDGY--NF 196 Query: 237 KSIKSILDWTSF-------NQERIVDVAGPGGWN 263 S +F N V +N Sbjct: 197 TSPVGSFPPNAFGVYDMHGNVYEWVADCWHDHYN 230 >5BX9-A nrPDB Length = 416 Score = 28.1 bits (61), Expect = 7.3, Method: Composition-based stats. Identities = 11/71 (15%), Positives = 21/71 (29%), Gaps = 14/71 (19%) Query: 144 GFPGSFGYYDIDAQTFADWGVDLLKFDGCYCDSLENLADGYKHMSLALNRTGRSIVYSCE 203 G ++ Y + W +D + ++ AL G ++S E Sbjct: 205 GTIATYHPYTQLPEGNYPWNLDFVSHAN--------------QINRALRNAGVPAIWSTE 250 Query: 204 WPLYMWPFQKP 214 W + K Sbjct: 251 WGWSAYKGPKE 261 >4NAS-A nrPDB Length = 409 Score = 28.1 bits (61), Expect = 7.4, Method: Composition-based stats. Identities = 18/70 (25%), Positives = 27/70 (38%), Gaps = 7/70 (10%) Query: 140 KTCAGFPGSFGYYDIDAQTFADWGVDLLKFDGCY----CDSLENLADGYKHMSLAL-NRT 194 K CAG + A+ GVDL+K D + + E+ Y + + RT Sbjct: 150 KACAGL--TLDELVEAFGEQAEGGVDLVKDDEIFFTEAYATPEDRVRAYAAKADEIAQRT 207 Query: 195 GRSIVYSCEW 204 GR Y+ Sbjct: 208 GRRTAYAVNL 217 >1RU4-A nrPDB Length = 400 Score = 27.8 bits (60), Expect = 9.5, Method: Composition-based stats. Identities = 12/51 (23%), Positives = 17/51 (33%), Gaps = 5/51 (9%) Query: 223 CNHWRNFADIDDSWKSIKSILDWTSFNQERIVDVAGPGGWNDPDMLVIGNF 273 C W N D D + S + ++ + G WND GN Sbjct: 201 CRAWENSDDGFDLFDSPQKVVI-----ENSWAFRNGINYWNDSAFAGNGNG 246 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.312 0.131 0.381 Lambda K H 0.267 0.0402 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 17,829,342 Number of Sequences: 36641 Number of extensions: 724666 Number of successful extensions: 1973 Number of sequences better than 10.0: 38 Number of HSP's better than 10.0 without gapping: 37 Number of HSP's successfully gapped in prelim test: 25 Number of HSP's that attempted gapping in prelim test: 1800 Number of HSP's gapped (non-prelim): 77 length of query: 429 length of database: 10,336,785 effective HSP length: 100 effective length of query: 329 effective length of database: 6,672,685 effective search space: 2195313365 effective search space used: 2195313365 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.4 bits) S2: 60 (27.7 bits)