BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= P05164 (745 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 5MFA-A nrPDB 1439 0.0 6AZP-A nrPDB 1201 0.0 1CXP-C nrPDB 967 0.0 3ERH-A nrPDB 688 0.0 4EJX-B nrPDB 243 3e-64 6ERC-A nrPDB 220 2e-57 5F1A-A nrPDB 47 2e-05 4KVK-A nrPDB 47 3e-05 3QH0-A nrPDB 46 6e-05 5WBE-A nrPDB 45 1e-04 4HHR-A nrPDB 33 0.48 4X4R-A nrPDB 33 0.56 3R7W-B nrPDB 30 4.4 >5MFA-A nrPDB Length = 697 Score = 1439 bits (3724), Expect = 0.0, Method: Compositional matrix adjust. Identities = 697/697 (100%), Positives = 697/697 (100%) Query: 49 AAPAVLGEVDTSLVLSSMEEAKQLVDKAYKERRESIKQRLRSGSASPMELLSYFKQPVAA 108 AAPAVLGEVDTSLVLSSMEEAKQLVDKAYKERRESIKQRLRSGSASPMELLSYFKQPVAA Sbjct: 1 AAPAVLGEVDTSLVLSSMEEAKQLVDKAYKERRESIKQRLRSGSASPMELLSYFKQPVAA 60 Query: 109 TRTAVRAADYLHVALDLLERKLRSLWRRPFNVTDVLTPAQLNVLSKSSGCAYQDVGVTCP 168 TRTAVRAADYLHVALDLLERKLRSLWRRPFNVTDVLTPAQLNVLSKSSGCAYQDVGVTCP Sbjct: 61 TRTAVRAADYLHVALDLLERKLRSLWRRPFNVTDVLTPAQLNVLSKSSGCAYQDVGVTCP 120 Query: 169 EQDKYRTITGMCNNRRSPTLGASNRAFVRWLPAEYEDGFSLPYGWTPGVKRNGFPVALAR 228 EQDKYRTITGMCNNRRSPTLGASNRAFVRWLPAEYEDGFSLPYGWTPGVKRNGFPVALAR Sbjct: 121 EQDKYRTITGMCNNRRSPTLGASNRAFVRWLPAEYEDGFSLPYGWTPGVKRNGFPVALAR 180 Query: 229 AVSNEIVRFPTDQLTPDQERSLMFMQWGQLLDHDLDFTPEPAARASFVTGVNCETSCVQQ 288 AVSNEIVRFPTDQLTPDQERSLMFMQWGQLLDHDLDFTPEPAARASFVTGVNCETSCVQQ Sbjct: 181 AVSNEIVRFPTDQLTPDQERSLMFMQWGQLLDHDLDFTPEPAARASFVTGVNCETSCVQQ 240 Query: 289 PPCFPLKIPPNDPRIKNQADCIPFFRSCPACPGSNITIRNQINALTSFVDASMVYGSEEP 348 PPCFPLKIPPNDPRIKNQADCIPFFRSCPACPGSNITIRNQINALTSFVDASMVYGSEEP Sbjct: 241 PPCFPLKIPPNDPRIKNQADCIPFFRSCPACPGSNITIRNQINALTSFVDASMVYGSEEP 300 Query: 349 LARNLRNMSNQLGLLAVNQRFQDNGRALLPFDNLHDDPCLLTNRSARIPCFLAGDTRSSE 408 LARNLRNMSNQLGLLAVNQRFQDNGRALLPFDNLHDDPCLLTNRSARIPCFLAGDTRSSE Sbjct: 301 LARNLRNMSNQLGLLAVNQRFQDNGRALLPFDNLHDDPCLLTNRSARIPCFLAGDTRSSE 360 Query: 409 MPELTSMHTLLLREHNRLATELKSLNPRWDGERLYQEARKIVGAMVQIITYRDYLPLVLG 468 MPELTSMHTLLLREHNRLATELKSLNPRWDGERLYQEARKIVGAMVQIITYRDYLPLVLG Sbjct: 361 MPELTSMHTLLLREHNRLATELKSLNPRWDGERLYQEARKIVGAMVQIITYRDYLPLVLG 420 Query: 469 PTAMRKYLPTYRSYNDSVDPRIANVFTNAFRYGHTLIQPFMFRLDNRYQPMEPNPRVPLS 528 PTAMRKYLPTYRSYNDSVDPRIANVFTNAFRYGHTLIQPFMFRLDNRYQPMEPNPRVPLS Sbjct: 421 PTAMRKYLPTYRSYNDSVDPRIANVFTNAFRYGHTLIQPFMFRLDNRYQPMEPNPRVPLS 480 Query: 529 RVFFASWRVVLEGGIDPILRGLMATPAKLNRQNQIAVDEIRERLFEQVMRIGLDLPALNM 588 RVFFASWRVVLEGGIDPILRGLMATPAKLNRQNQIAVDEIRERLFEQVMRIGLDLPALNM Sbjct: 481 RVFFASWRVVLEGGIDPILRGLMATPAKLNRQNQIAVDEIRERLFEQVMRIGLDLPALNM 540 Query: 589 QRSRDHGLPGYNAWRRFCGLPQPETVGQLGTVLRNLKLARKLMEQYGTPNNIDIWMGGVS 648 QRSRDHGLPGYNAWRRFCGLPQPETVGQLGTVLRNLKLARKLMEQYGTPNNIDIWMGGVS Sbjct: 541 QRSRDHGLPGYNAWRRFCGLPQPETVGQLGTVLRNLKLARKLMEQYGTPNNIDIWMGGVS 600 Query: 649 EPLKRKGRVGPLLACIIGTQFRKLRDGDRFWWENEGVFSMQQRQALAQISLPRIICDNTG 708 EPLKRKGRVGPLLACIIGTQFRKLRDGDRFWWENEGVFSMQQRQALAQISLPRIICDNTG Sbjct: 601 EPLKRKGRVGPLLACIIGTQFRKLRDGDRFWWENEGVFSMQQRQALAQISLPRIICDNTG 660 Query: 709 ITTVSKNNIFMSNSYPRDFVNCSTLPALNLASWREAS 745 ITTVSKNNIFMSNSYPRDFVNCSTLPALNLASWREAS Sbjct: 661 ITTVSKNNIFMSNSYPRDFVNCSTLPALNLASWREAS 697 >6AZP-A nrPDB Length = 577 Score = 1201 bits (3107), Expect = 0.0, Method: Compositional matrix adjust. Identities = 577/577 (100%), Positives = 577/577 (100%) Query: 167 CPEQDKYRTITGMCNNRRSPTLGASNRAFVRWLPAEYEDGFSLPYGWTPGVKRNGFPVAL 226 CPEQDKYRTITGMCNNRRSPTLGASNRAFVRWLPAEYEDGFSLPYGWTPGVKRNGFPVAL Sbjct: 1 CPEQDKYRTITGMCNNRRSPTLGASNRAFVRWLPAEYEDGFSLPYGWTPGVKRNGFPVAL 60 Query: 227 ARAVSNEIVRFPTDQLTPDQERSLMFMQWGQLLDHDLDFTPEPAARASFVTGVNCETSCV 286 ARAVSNEIVRFPTDQLTPDQERSLMFMQWGQLLDHDLDFTPEPAARASFVTGVNCETSCV Sbjct: 61 ARAVSNEIVRFPTDQLTPDQERSLMFMQWGQLLDHDLDFTPEPAARASFVTGVNCETSCV 120 Query: 287 QQPPCFPLKIPPNDPRIKNQADCIPFFRSCPACPGSNITIRNQINALTSFVDASMVYGSE 346 QQPPCFPLKIPPNDPRIKNQADCIPFFRSCPACPGSNITIRNQINALTSFVDASMVYGSE Sbjct: 121 QQPPCFPLKIPPNDPRIKNQADCIPFFRSCPACPGSNITIRNQINALTSFVDASMVYGSE 180 Query: 347 EPLARNLRNMSNQLGLLAVNQRFQDNGRALLPFDNLHDDPCLLTNRSARIPCFLAGDTRS 406 EPLARNLRNMSNQLGLLAVNQRFQDNGRALLPFDNLHDDPCLLTNRSARIPCFLAGDTRS Sbjct: 181 EPLARNLRNMSNQLGLLAVNQRFQDNGRALLPFDNLHDDPCLLTNRSARIPCFLAGDTRS 240 Query: 407 SEMPELTSMHTLLLREHNRLATELKSLNPRWDGERLYQEARKIVGAMVQIITYRDYLPLV 466 SEMPELTSMHTLLLREHNRLATELKSLNPRWDGERLYQEARKIVGAMVQIITYRDYLPLV Sbjct: 241 SEMPELTSMHTLLLREHNRLATELKSLNPRWDGERLYQEARKIVGAMVQIITYRDYLPLV 300 Query: 467 LGPTAMRKYLPTYRSYNDSVDPRIANVFTNAFRYGHTLIQPFMFRLDNRYQPMEPNPRVP 526 LGPTAMRKYLPTYRSYNDSVDPRIANVFTNAFRYGHTLIQPFMFRLDNRYQPMEPNPRVP Sbjct: 301 LGPTAMRKYLPTYRSYNDSVDPRIANVFTNAFRYGHTLIQPFMFRLDNRYQPMEPNPRVP 360 Query: 527 LSRVFFASWRVVLEGGIDPILRGLMATPAKLNRQNQIAVDEIRERLFEQVMRIGLDLPAL 586 LSRVFFASWRVVLEGGIDPILRGLMATPAKLNRQNQIAVDEIRERLFEQVMRIGLDLPAL Sbjct: 361 LSRVFFASWRVVLEGGIDPILRGLMATPAKLNRQNQIAVDEIRERLFEQVMRIGLDLPAL 420 Query: 587 NMQRSRDHGLPGYNAWRRFCGLPQPETVGQLGTVLRNLKLARKLMEQYGTPNNIDIWMGG 646 NMQRSRDHGLPGYNAWRRFCGLPQPETVGQLGTVLRNLKLARKLMEQYGTPNNIDIWMGG Sbjct: 421 NMQRSRDHGLPGYNAWRRFCGLPQPETVGQLGTVLRNLKLARKLMEQYGTPNNIDIWMGG 480 Query: 647 VSEPLKRKGRVGPLLACIIGTQFRKLRDGDRFWWENEGVFSMQQRQALAQISLPRIICDN 706 VSEPLKRKGRVGPLLACIIGTQFRKLRDGDRFWWENEGVFSMQQRQALAQISLPRIICDN Sbjct: 481 VSEPLKRKGRVGPLLACIIGTQFRKLRDGDRFWWENEGVFSMQQRQALAQISLPRIICDN 540 Query: 707 TGITTVSKNNIFMSNSYPRDFVNCSTLPALNLASWRE 743 TGITTVSKNNIFMSNSYPRDFVNCSTLPALNLASWRE Sbjct: 541 TGITTVSKNNIFMSNSYPRDFVNCSTLPALNLASWRE 577 >1CXP-C nrPDB Length = 466 Score = 967 bits (2500), Expect = 0.0, Method: Compositional matrix adjust. Identities = 466/466 (100%), Positives = 466/466 (100%) Query: 279 VNCETSCVQQPPCFPLKIPPNDPRIKNQADCIPFFRSCPACPGSNITIRNQINALTSFVD 338 VNCETSCVQQPPCFPLKIPPNDPRIKNQADCIPFFRSCPACPGSNITIRNQINALTSFVD Sbjct: 1 VNCETSCVQQPPCFPLKIPPNDPRIKNQADCIPFFRSCPACPGSNITIRNQINALTSFVD 60 Query: 339 ASMVYGSEEPLARNLRNMSNQLGLLAVNQRFQDNGRALLPFDNLHDDPCLLTNRSARIPC 398 ASMVYGSEEPLARNLRNMSNQLGLLAVNQRFQDNGRALLPFDNLHDDPCLLTNRSARIPC Sbjct: 61 ASMVYGSEEPLARNLRNMSNQLGLLAVNQRFQDNGRALLPFDNLHDDPCLLTNRSARIPC 120 Query: 399 FLAGDTRSSEMPELTSMHTLLLREHNRLATELKSLNPRWDGERLYQEARKIVGAMVQIIT 458 FLAGDTRSSEMPELTSMHTLLLREHNRLATELKSLNPRWDGERLYQEARKIVGAMVQIIT Sbjct: 121 FLAGDTRSSEMPELTSMHTLLLREHNRLATELKSLNPRWDGERLYQEARKIVGAMVQIIT 180 Query: 459 YRDYLPLVLGPTAMRKYLPTYRSYNDSVDPRIANVFTNAFRYGHTLIQPFMFRLDNRYQP 518 YRDYLPLVLGPTAMRKYLPTYRSYNDSVDPRIANVFTNAFRYGHTLIQPFMFRLDNRYQP Sbjct: 181 YRDYLPLVLGPTAMRKYLPTYRSYNDSVDPRIANVFTNAFRYGHTLIQPFMFRLDNRYQP 240 Query: 519 MEPNPRVPLSRVFFASWRVVLEGGIDPILRGLMATPAKLNRQNQIAVDEIRERLFEQVMR 578 MEPNPRVPLSRVFFASWRVVLEGGIDPILRGLMATPAKLNRQNQIAVDEIRERLFEQVMR Sbjct: 241 MEPNPRVPLSRVFFASWRVVLEGGIDPILRGLMATPAKLNRQNQIAVDEIRERLFEQVMR 300 Query: 579 IGLDLPALNMQRSRDHGLPGYNAWRRFCGLPQPETVGQLGTVLRNLKLARKLMEQYGTPN 638 IGLDLPALNMQRSRDHGLPGYNAWRRFCGLPQPETVGQLGTVLRNLKLARKLMEQYGTPN Sbjct: 301 IGLDLPALNMQRSRDHGLPGYNAWRRFCGLPQPETVGQLGTVLRNLKLARKLMEQYGTPN 360 Query: 639 NIDIWMGGVSEPLKRKGRVGPLLACIIGTQFRKLRDGDRFWWENEGVFSMQQRQALAQIS 698 NIDIWMGGVSEPLKRKGRVGPLLACIIGTQFRKLRDGDRFWWENEGVFSMQQRQALAQIS Sbjct: 361 NIDIWMGGVSEPLKRKGRVGPLLACIIGTQFRKLRDGDRFWWENEGVFSMQQRQALAQIS 420 Query: 699 LPRIICDNTGITTVSKNNIFMSNSYPRDFVNCSTLPALNLASWREA 744 LPRIICDNTGITTVSKNNIFMSNSYPRDFVNCSTLPALNLASWREA Sbjct: 421 LPRIICDNTGITTVSKNNIFMSNSYPRDFVNCSTLPALNLASWREA 466 >3ERH-A nrPDB Length = 595 Score = 688 bits (1775), Expect = 0.0, Method: Compositional matrix adjust. Identities = 335/589 (56%), Positives = 431/589 (73%), Gaps = 7/589 (1%) Query: 157 GCAYQDVGVTCPEQDKYRTITGMCNNRRSPTLGASNRAFVRWLPAEYEDGFSLPYGWTPG 216 GC V C E YRTITG CNNRRSP LGA+NRA RWLPAEYEDG +LP+GWT Sbjct: 5 GCGAPVPLVKCDENSPYRTITGDCNNRRSPALGAANRALARWLPAEYEDGLALPFGWTQR 64 Query: 217 VKRNGFPVALARAVSNEIVRFPTDQLTPDQERSLMFMQWGQLLDHDLDFTPEPAARASFV 276 RNGF V LAR VSN+IV + ++ DQ RSL+FMQWGQ++DHDLDF PE ++ Sbjct: 65 KTRNGFRVPLAREVSNKIVGYLDEEGVLDQNRSLLFMQWGQIVDHDLDFAPETELGSNEH 124 Query: 277 TGVNCETSCVQQPPCFPLKIPPNDPRIKNQADCIPFFRS---CPACPGSNITIRNQINAL 333 + CE C+Q CFP+ P NDP++K Q C+PFFR+ CP P ++ R QINA+ Sbjct: 125 SKTQCEEYCIQGDNCFPIMFPKNDPKLKTQGKCMPFFRAGFVCPTPPYQSLA-REQINAV 183 Query: 334 TSFVDASMVYGSEEPLARNLRNMSNQLGLLAVNQRFQDNGRALLPFDNLHDDPCLLTNRS 393 TSF+DAS+VYGSE LA LRN+S+ LGL+AVNQ D+G A LPF+N PC N + Sbjct: 184 TSFLDASLVYGSEPSLASRLRNLSSPLGLMAVNQEAWDHGLAYLPFNNKKPSPCEFINTT 243 Query: 394 ARIPCFLAGDTRSSEMPELTSMHTLLLREHNRLATELKSLNPRWDGERLYQEARKIVGAM 453 AR+PCFLAGD R+SE L + HTLLLREHNRLA ELK LNP W+GE+LYQEARKI+GA Sbjct: 244 ARVPCFLAGDFRASEQILLATAHTLLLREHNRLARELKKLNPHWNGEKLYQEARKILGAF 303 Query: 454 VQIITYRDYLPLVLGPTAMRKYLPTYRSYNDSVDPRIANVFTNAFRYGHTLIQPFMFRLD 513 +QIIT+RDYLP+VLG + M+K++P Y+ YN+SVDPRI+NVFT AFR+GH + + RLD Sbjct: 304 IQIITFRDYLPIVLG-SEMQKWIPPYQGYNNSVDPRISNVFTFAFRFGHMEVPSTVSRLD 362 Query: 514 NRYQPMEPNPRVPLSRVFFASWRVVLEGGIDPILRGLMATPAKLNRQNQIAVDEIRERLF 573 YQP P +PL +FF +WR++ +GGIDP+ RGL+A +KL Q+++ E+R +LF Sbjct: 363 ENYQPWGPEAELPLHTLFFNTWRIIKDGGIDPLTRGLLAKKSKLMNQDKMVTSELRNKLF 422 Query: 574 EQVMRI-GLDLPALNMQRSRDHGLPGYNAWRRFCGLPQPETVGQLGTVLRNLKLARKLME 632 + +I G DL A+N+QR RDHG+PGYN+WR FCGL QP+T+ L TVL+N LA+KLM+ Sbjct: 423 QPTHKIHGFDLAAINLQRCRDHGMPGYNSWRGFCGLSQPKTLKGLQTVLKNKILAKKLMD 482 Query: 633 QYGTPNNIDIWMGGVSEPLKRKGRVGPLLACIIGTQFRKLRDGDRFWWENEGVFSMQQRQ 692 Y TP+NIDIW+GG +EP+ +GRVGPLLAC++G QF+++RDGDRFWWEN GVF+ +QR Sbjct: 483 LYKTPDNIDIWIGGNAEPMVERGRVGPLLACLLGRQFQQIRDGDRFWWENPGVFTEKQRD 542 Query: 693 ALAQISLPRIICDNTGITTVSKNNIFMSNSYPRDFVNCSTLPALNLASW 741 +L + S R+ICDNT IT V + F +N+YP DFV+CST+ L+L+ W Sbjct: 543 SLQKFSFSRLICDNTHITKVPL-HAFQANNYPHDFVDCSTVDKLDLSPW 590 >4EJX-B nrPDB Length = 114 Score = 243 bits (619), Expect = 3e-64, Method: Compositional matrix adjust. Identities = 114/114 (100%), Positives = 114/114 (100%) Query: 165 VTCPEQDKYRTITGMCNNRRSPTLGASNRAFVRWLPAEYEDGFSLPYGWTPGVKRNGFPV 224 VTCPEQDKYRTITGMCNNRRSPTLGASNRAFVRWLPAEYEDGFSLPYGWTPGVKRNGFPV Sbjct: 1 VTCPEQDKYRTITGMCNNRRSPTLGASNRAFVRWLPAEYEDGFSLPYGWTPGVKRNGFPV 60 Query: 225 ALARAVSNEIVRFPTDQLTPDQERSLMFMQWGQLLDHDLDFTPEPAARASFVTG 278 ALARAVSNEIVRFPTDQLTPDQERSLMFMQWGQLLDHDLDFTPEPAARASFVTG Sbjct: 61 ALARAVSNEIVRFPTDQLTPDQERSLMFMQWGQLLDHDLDFTPEPAARASFVTG 114 >6ERC-A nrPDB Length = 511 Score = 220 bits (560), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 162/544 (29%), Positives = 263/544 (48%), Gaps = 106/544 (19%) Query: 172 KYRTITGMCNNRRSPTLGASNRAFVRWL-PAEYEDGFSLPYGWTPGVKRNGFPVAL---A 227 ++R+ TG NN+++P G+ F+R P ++ +NGFP + Sbjct: 3 EFRSYTGEGNNKQNPKQGSIFTPFIRLANPIKF--------------NKNGFPNITNQPS 48 Query: 228 RAVSNEIVRFPTDQLTPDQERSLMFMQWGQLLDHDLDFT-PEPAARASFVTGVNCETSCV 286 RA+SN I T + + + MF WGQ L H++ + PEP + Sbjct: 49 RAISNIIFDQQT-HIGSKEHLTDMFNMWGQFLIHNMALSKPEPNS--------------- 92 Query: 287 QQPPCFPLKIPPNDPR-----IKNQADCIPFFRS----CPACPGSNITIRN-----QINA 332 +P+K+P D I N+ + +FR+ P G + + QIN+ Sbjct: 93 -----WPIKVPKCDQYFDPACIGNKT--MNYFRTRATEVPCDVGKTVVDEDGKCYEQINS 145 Query: 333 LTSFVDASMVYGSEEPLARNLRNMSNQLGLLAVNQRFQ-----------DNGRALLPFDN 381 L S++D +++YG+ E + +NLR++S + V DN L P D Sbjct: 146 LGSYIDGNVLYGNSEEICKNLRSLSGGEMKMTVTDVGDLPPKNVPGVPMDNDANLFPIDQ 205 Query: 382 LHDDPCLLTNRSARIPCFLAGDTRSSEMPELTSMHTLLLREHNRLATELKSLNPRWDGER 441 L+ G+ R +E P L S+HTLLLR+HNRLA + L+P WD ER Sbjct: 206 LYS----------------VGERRGNENPGLLSIHTLLLRDHNRLARKFARLHPEWDDER 249 Query: 442 LYQEARKIVGAMVQIITYRDYLPLVLGPTAMRKYLPTYRSYNDSVDPRIANVF-TNAFRY 500 ++Q++R + +Q ITY +YLP LG P+Y Y+ +V+ +++N F T AFR+ Sbjct: 250 VFQQSRSCIIEQIQKITYDEYLPTTLGS------FPSYTGYDANVNAQVSNEFTTTAFRF 303 Query: 501 GHTLIQPFMFRLDNRYQPMEPNPRVPLSRVFFASWRVVLEGGIDPILRGLMATPAKLNRQ 560 GH+ + PFM ++P +P+ +F L G++P++RGL+ +N + Sbjct: 304 GHSEVGPFMEYYSENGTRLQP---LPIKFSYFNPH--ALNRGVEPLIRGLI-----INEE 353 Query: 561 NQI---AVDEIRERLFEQVMRIGLDLPALNMQRSRDHGLPGYNAWRRFCGLPQPETVGQL 617 I + ++R LF + + GLDL + N+QR+RDHG+P YN+ RR GL V Sbjct: 354 ENIDIYMISDLRNFLFGKPGQGGLDLASRNLQRNRDHGIPPYNSLRRQLGL---RPVQTW 410 Query: 618 GTVLRNLKLARKLMEQYGTPNNIDIWMGGVSEPLKRKGRVGPLLACIIGTQFRKLRDGDR 677 + + ++ +L Y + ++ID ++GG++E VG II QF + R GDR Sbjct: 411 SDITSDPQIQNRLKNAYKSVDDIDSYVGGLAEDHMEGSCVGQTFYLIIYEQFFRTRAGDR 470 Query: 678 FWWE 681 FW+E Sbjct: 471 FWYE 474 >5F1A-A nrPDB Length = 553 Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 49/191 (25%), Positives = 83/191 (43%), Gaps = 29/191 (15%) Query: 399 FLAGDTRSSEMPELTSMHTLLLREHNRLATELKSLNPRWDGERLYQEARKI-VGAMVQII 457 F G +P L T+ LREHNR+ LK +P W E+L+Q +R I +G ++I+ Sbjct: 254 FAVGQEVFGLVPGLMMYATIWLREHNRVCDVLKQEHPEWGDEQLFQTSRLILIGETIKIV 313 Query: 458 TYRDYLPLVLGPTAMRKYLPTYRSYNDSV--DPRIANVFTNAFRYGHTLIQPFMFRL-DN 514 DY+ + G K+ P +N RIA F N + H L+ P F++ D Sbjct: 314 I-EDYVQHLSGYHFKLKFDPELL-FNKQFQYQNRIAAEF-NTLYHWHPLL-PDTFQIHDQ 369 Query: 515 RYQPMEPNPRVPLSRVFFASWRVVLEGGIDPILR-----------GLMATPAKLNRQNQI 563 +Y + F + ++LE GI + G P + + +Q Sbjct: 370 KYNYQQ----------FIYNNSILLEHGITQFVESFTRQIAGRVAGGRNVPPAVQKVSQA 419 Query: 564 AVDEIRERLFE 574 ++D+ R+ ++ Sbjct: 420 SIDQSRQMKYQ 430 >4KVK-A nrPDB Length = 621 Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 71/332 (21%), Positives = 119/332 (35%), Gaps = 65/332 (19%) Query: 143 VLTPAQLNVLSKSSGCAYQDVGVTCPEQDKYRTITGMCNNRRSPTLGASNRAFVRWL-PA 201 +L L + +SS A D P++ YRT G N+ + G+ N F R + P Sbjct: 62 LLEKYNLLAVGRSSHGALFD-----PKEFLYRTEDGKYNDPHNAEAGSQNTFFGRNMEPV 116 Query: 202 EYEDGFSLPYGWTPGVKRNGFPVALARAVSNEIVRFPTDQLTPDQERSLMFMQWGQLLDH 261 + +D P + K LAR + ++ +++ W Q + H Sbjct: 117 DQQDELMSPDPFVVATK------LLARREYKDT----------GKQFNILAAAWIQFMVH 160 Query: 262 DLDFTPEPAARASFVTGVNCETSCVQQPPCFPLKIPPNDPRIKNQADCIPFFRSCPACPG 321 D E + G+ + P K P + +D I Sbjct: 161 DWMDHMEDTGQ----IGITAPKEVANECPLKSFKFHPT-KELPTNSDGIKI--------- 206 Query: 322 SNITIRNQINALTSFVDASMVYGSEEPLARNLRNMSNQLGLLAVNQRFQDNGRALLPFDN 381 N T++ D S VYG+ E A LR + G L + Sbjct: 207 ------GHYNIRTAWWDGSAVYGNNEERAEKLRTYVD--GKLVIG--------------- 243 Query: 382 LHDDPCLLTNRSARIPCFLAGDTRSSEMPELTSMHTLLLREHNRLATELKSLNPRWDGER 441 DD LL + L+GD R+S ++ + L ++EHN + +K +P E Sbjct: 244 --DDGLLLHKENG---VALSGDIRNS-WAGVSILQALFVKEHNAVCDAIKEEHPNLSDEE 297 Query: 442 LYQEARKIVGAMVQIITYRDYLPLVLGPTAMR 473 LY+ A+ + A++ + D+ +L MR Sbjct: 298 LYRYAKLVTSAVIAKVHTIDWTVELLKTKTMR 329 >3QH0-A nrPDB Length = 610 Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 59/242 (24%), Positives = 101/242 (41%), Gaps = 28/242 (11%) Query: 399 FLAGDTRSSEMPELTSMHTLLLREHNRLATELKSLNPRWDGERLYQEARKI-VGAMVQII 457 F G +P L T+ LREHNR+ LK +P W E+L+Q +R I +G ++I+ Sbjct: 277 FAVGQEVFGLVPGLMMYATIWLREHNRVCDILKQEHPEWGDEQLFQTSRLILIGETIKIV 336 Query: 458 TYRDYLPLVLGPTAMRKYLPTYRSYNDSV--DPRIANVFTNAFRYGHTLIQPFMFRLDNR 515 DY+ + G K+ P +N RIA+ F N + H L+ P F ++++ Sbjct: 337 I-EDYVQHLSGYHFKLKFDPELL-FNQQFQYQNRIASEF-NTLYHWHPLL-PDTFNIEDQ 392 Query: 516 YQPMEPNPRVPLSRVFFASWRVVLEGGIDPILRGL---MATPAKLNRQNQIAVDEIRERL 572 + F + ++LE G+ + +A R IAV + + Sbjct: 393 EYSF---------KQFLYNNSILLEHGLTQFVESFTRQIAGRVAGGRNVPIAVQAVAKAS 443 Query: 573 FEQVMRIGLDLPALNMQRSRDHGLPGYNAWRRFCGLPQPETVGQLGTVLRNLKLARKLME 632 +Q + +LN R R L Y ++ G + E +L + ++ +ME Sbjct: 444 IDQSRE--MKYQSLNEYRKR-FSLKPYTSFEELTG--EKEMAAELKALYSDI----DVME 494 Query: 633 QY 634 Y Sbjct: 495 LY 496 >5WBE-A nrPDB Length = 600 Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 60/251 (23%), Positives = 113/251 (45%), Gaps = 45/251 (17%) Query: 409 MPELTSMHTLLLREHNRLATELKSLNPRWDGERLYQEARKI-VGAMVQIITYRDYLPLVL 467 +P L T+ LREHNR+ LK+ +P W E+L+Q AR I +G ++I+ +Y+ + Sbjct: 295 LPGLMLYATIWLREHNRVCDLLKAEHPTWGDEQLFQTARLILIGETIKIVI-EEYVQQLS 353 Query: 468 GPTAMRKYLPT--------YRSYNDSVDPRIANVFTNAFRYGHTLIQPFMFRLDNRYQPM 519 G K+ P YR+ RIA F + + H L+ P FR+ Sbjct: 354 GYFLQLKFDPELLFGAQFQYRN-------RIAMEFNQLYHW-HPLM-PDSFRV------- 397 Query: 520 EPNPRVPLSRVFFASWRVVLEGGIDPILRGLMATPA-KLNRQNQIAVDEIRERLFEQVMR 578 P+ F + ++++ G++ ++ PA ++ I ++ Sbjct: 398 --GPQDYSYEQFLFNTSMLVDYGVEALVDAFSRQPAGRIGGGRNID---------HHILH 446 Query: 579 IGLDLPALNMQRSRDHGLPGYNAWRRFCGLPQPETVGQLGTVLRNLKLARKLMEQYGTPN 638 + +D+ ++ SR L +N +R+ G+ +P T Q T + ++A +L E YG + Sbjct: 447 VAVDV----IKESRVLRLQPFNEYRKRFGM-KPYTSFQELTGEK--EMAAELEELYGDID 499 Query: 639 NIDIWMGGVSE 649 ++ + G + E Sbjct: 500 ALEFYPGLLLE 510 >4HHR-A nrPDB Length = 652 Score = 33.1 bits (74), Expect = 0.48, Method: Compositional matrix adjust. Identities = 35/132 (26%), Positives = 61/132 (46%), Gaps = 22/132 (16%) Query: 331 NALTSFVDASMVYGSEEPLARNLRNMSNQLGLLAVNQRFQDNGRALLPFDNLHDDPCLLT 390 N T + D+S++YGS +R + G L +++ LL LHD+ L Sbjct: 225 NIRTPWWDSSVIYGSNSKTLDRVRTYKD--GKLKISEE-----TGLL----LHDEDGLA- 272 Query: 391 NRSARIPCFLAGDTRSSEMPELTSMHTLLLREHNRLATELKSLNPRWDGERLYQEARKIV 450 ++GD R+S ++++ L ++EHN + LK + + E LY+ AR + Sbjct: 273 ---------ISGDIRNS-WAGVSALQALFIKEHNAVCDALKDEDDDLEDEDLYRYARLVT 322 Query: 451 GAMVQIITYRDY 462 A+V I D+ Sbjct: 323 SAVVAKIHTIDW 334 >4X4R-A nrPDB Length = 457 Score = 32.7 bits (73), Expect = 0.56, Method: Compositional matrix adjust. Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 5/57 (8%) Query: 290 PCFPLKIPPNDPRIKNQADCIPFFRSCPACPGSNITIRNQINALTSFVDASMVYGSE 346 PC+ LK P N IK+ D PF G N++ L F+ A+ +YG+E Sbjct: 113 PCYKLKEPKN---IKSAVDRTPFHHKW--LEGRIKGKENEVRLLKGFLKANGIYGAE 164 >3R7W-B nrPDB Length = 331 Score = 30.0 bits (66), Expect = 4.4, Method: Compositional matrix adjust. Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 4/57 (7%) Query: 405 RSSEMPELTSMHTLLLREHNRLATELKSLNPRWDGERLYQEARKIVGAMVQIITYRD 461 S+ P L TL+ L +L P +D ERL+ K VGA+V +I +D Sbjct: 32 ESTSNPSLEHFSTLIDLAVMELPGQLNYFEPSYDSERLF----KSVGALVYVIDSQD 84 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 5MFA-A nrPDB 1159 0.0 6AZP-A nrPDB 922 0.0 3ERH-A nrPDB 874 0.0 1CXP-C nrPDB 748 0.0 6ERC-A nrPDB 537 e-153 4KVK-A nrPDB 359 2e-99 5WBE-A nrPDB 259 3e-69 5F1A-A nrPDB 246 2e-65 3QH0-A nrPDB 246 3e-65 4EJX-B nrPDB 182 5e-46 Sequences not found previously or not previously below threshold: 4HHR-A nrPDB 224 9e-59 5CEF-A nrPDB 32 0.83 3UP8-A nrPDB 32 1.0 3EVT-A nrPDB 31 2.1 5U8R-A nrPDB 31 2.3 1FCV-A nrPDB 30 4.6 4YK4-E nrPDB 30 4.8 3PEU-B nrPDB 30 5.1 >5MFA-A nrPDB Length = 697 Score = 1159 bits (2998), Expect = 0.0, Method: Composition-based stats. Identities = 697/697 (100%), Positives = 697/697 (100%) Query: 49 AAPAVLGEVDTSLVLSSMEEAKQLVDKAYKERRESIKQRLRSGSASPMELLSYFKQPVAA 108 AAPAVLGEVDTSLVLSSMEEAKQLVDKAYKERRESIKQRLRSGSASPMELLSYFKQPVAA Sbjct: 1 AAPAVLGEVDTSLVLSSMEEAKQLVDKAYKERRESIKQRLRSGSASPMELLSYFKQPVAA 60 Query: 109 TRTAVRAADYLHVALDLLERKLRSLWRRPFNVTDVLTPAQLNVLSKSSGCAYQDVGVTCP 168 TRTAVRAADYLHVALDLLERKLRSLWRRPFNVTDVLTPAQLNVLSKSSGCAYQDVGVTCP Sbjct: 61 TRTAVRAADYLHVALDLLERKLRSLWRRPFNVTDVLTPAQLNVLSKSSGCAYQDVGVTCP 120 Query: 169 EQDKYRTITGMCNNRRSPTLGASNRAFVRWLPAEYEDGFSLPYGWTPGVKRNGFPVALAR 228 EQDKYRTITGMCNNRRSPTLGASNRAFVRWLPAEYEDGFSLPYGWTPGVKRNGFPVALAR Sbjct: 121 EQDKYRTITGMCNNRRSPTLGASNRAFVRWLPAEYEDGFSLPYGWTPGVKRNGFPVALAR 180 Query: 229 AVSNEIVRFPTDQLTPDQERSLMFMQWGQLLDHDLDFTPEPAARASFVTGVNCETSCVQQ 288 AVSNEIVRFPTDQLTPDQERSLMFMQWGQLLDHDLDFTPEPAARASFVTGVNCETSCVQQ Sbjct: 181 AVSNEIVRFPTDQLTPDQERSLMFMQWGQLLDHDLDFTPEPAARASFVTGVNCETSCVQQ 240 Query: 289 PPCFPLKIPPNDPRIKNQADCIPFFRSCPACPGSNITIRNQINALTSFVDASMVYGSEEP 348 PPCFPLKIPPNDPRIKNQADCIPFFRSCPACPGSNITIRNQINALTSFVDASMVYGSEEP Sbjct: 241 PPCFPLKIPPNDPRIKNQADCIPFFRSCPACPGSNITIRNQINALTSFVDASMVYGSEEP 300 Query: 349 LARNLRNMSNQLGLLAVNQRFQDNGRALLPFDNLHDDPCLLTNRSARIPCFLAGDTRSSE 408 LARNLRNMSNQLGLLAVNQRFQDNGRALLPFDNLHDDPCLLTNRSARIPCFLAGDTRSSE Sbjct: 301 LARNLRNMSNQLGLLAVNQRFQDNGRALLPFDNLHDDPCLLTNRSARIPCFLAGDTRSSE 360 Query: 409 MPELTSMHTLLLREHNRLATELKSLNPRWDGERLYQEARKIVGAMVQIITYRDYLPLVLG 468 MPELTSMHTLLLREHNRLATELKSLNPRWDGERLYQEARKIVGAMVQIITYRDYLPLVLG Sbjct: 361 MPELTSMHTLLLREHNRLATELKSLNPRWDGERLYQEARKIVGAMVQIITYRDYLPLVLG 420 Query: 469 PTAMRKYLPTYRSYNDSVDPRIANVFTNAFRYGHTLIQPFMFRLDNRYQPMEPNPRVPLS 528 PTAMRKYLPTYRSYNDSVDPRIANVFTNAFRYGHTLIQPFMFRLDNRYQPMEPNPRVPLS Sbjct: 421 PTAMRKYLPTYRSYNDSVDPRIANVFTNAFRYGHTLIQPFMFRLDNRYQPMEPNPRVPLS 480 Query: 529 RVFFASWRVVLEGGIDPILRGLMATPAKLNRQNQIAVDEIRERLFEQVMRIGLDLPALNM 588 RVFFASWRVVLEGGIDPILRGLMATPAKLNRQNQIAVDEIRERLFEQVMRIGLDLPALNM Sbjct: 481 RVFFASWRVVLEGGIDPILRGLMATPAKLNRQNQIAVDEIRERLFEQVMRIGLDLPALNM 540 Query: 589 QRSRDHGLPGYNAWRRFCGLPQPETVGQLGTVLRNLKLARKLMEQYGTPNNIDIWMGGVS 648 QRSRDHGLPGYNAWRRFCGLPQPETVGQLGTVLRNLKLARKLMEQYGTPNNIDIWMGGVS Sbjct: 541 QRSRDHGLPGYNAWRRFCGLPQPETVGQLGTVLRNLKLARKLMEQYGTPNNIDIWMGGVS 600 Query: 649 EPLKRKGRVGPLLACIIGTQFRKLRDGDRFWWENEGVFSMQQRQALAQISLPRIICDNTG 708 EPLKRKGRVGPLLACIIGTQFRKLRDGDRFWWENEGVFSMQQRQALAQISLPRIICDNTG Sbjct: 601 EPLKRKGRVGPLLACIIGTQFRKLRDGDRFWWENEGVFSMQQRQALAQISLPRIICDNTG 660 Query: 709 ITTVSKNNIFMSNSYPRDFVNCSTLPALNLASWREAS 745 ITTVSKNNIFMSNSYPRDFVNCSTLPALNLASWREAS Sbjct: 661 ITTVSKNNIFMSNSYPRDFVNCSTLPALNLASWREAS 697 >6AZP-A nrPDB Length = 577 Score = 922 bits (2382), Expect = 0.0, Method: Composition-based stats. Identities = 577/577 (100%), Positives = 577/577 (100%) Query: 167 CPEQDKYRTITGMCNNRRSPTLGASNRAFVRWLPAEYEDGFSLPYGWTPGVKRNGFPVAL 226 CPEQDKYRTITGMCNNRRSPTLGASNRAFVRWLPAEYEDGFSLPYGWTPGVKRNGFPVAL Sbjct: 1 CPEQDKYRTITGMCNNRRSPTLGASNRAFVRWLPAEYEDGFSLPYGWTPGVKRNGFPVAL 60 Query: 227 ARAVSNEIVRFPTDQLTPDQERSLMFMQWGQLLDHDLDFTPEPAARASFVTGVNCETSCV 286 ARAVSNEIVRFPTDQLTPDQERSLMFMQWGQLLDHDLDFTPEPAARASFVTGVNCETSCV Sbjct: 61 ARAVSNEIVRFPTDQLTPDQERSLMFMQWGQLLDHDLDFTPEPAARASFVTGVNCETSCV 120 Query: 287 QQPPCFPLKIPPNDPRIKNQADCIPFFRSCPACPGSNITIRNQINALTSFVDASMVYGSE 346 QQPPCFPLKIPPNDPRIKNQADCIPFFRSCPACPGSNITIRNQINALTSFVDASMVYGSE Sbjct: 121 QQPPCFPLKIPPNDPRIKNQADCIPFFRSCPACPGSNITIRNQINALTSFVDASMVYGSE 180 Query: 347 EPLARNLRNMSNQLGLLAVNQRFQDNGRALLPFDNLHDDPCLLTNRSARIPCFLAGDTRS 406 EPLARNLRNMSNQLGLLAVNQRFQDNGRALLPFDNLHDDPCLLTNRSARIPCFLAGDTRS Sbjct: 181 EPLARNLRNMSNQLGLLAVNQRFQDNGRALLPFDNLHDDPCLLTNRSARIPCFLAGDTRS 240 Query: 407 SEMPELTSMHTLLLREHNRLATELKSLNPRWDGERLYQEARKIVGAMVQIITYRDYLPLV 466 SEMPELTSMHTLLLREHNRLATELKSLNPRWDGERLYQEARKIVGAMVQIITYRDYLPLV Sbjct: 241 SEMPELTSMHTLLLREHNRLATELKSLNPRWDGERLYQEARKIVGAMVQIITYRDYLPLV 300 Query: 467 LGPTAMRKYLPTYRSYNDSVDPRIANVFTNAFRYGHTLIQPFMFRLDNRYQPMEPNPRVP 526 LGPTAMRKYLPTYRSYNDSVDPRIANVFTNAFRYGHTLIQPFMFRLDNRYQPMEPNPRVP Sbjct: 301 LGPTAMRKYLPTYRSYNDSVDPRIANVFTNAFRYGHTLIQPFMFRLDNRYQPMEPNPRVP 360 Query: 527 LSRVFFASWRVVLEGGIDPILRGLMATPAKLNRQNQIAVDEIRERLFEQVMRIGLDLPAL 586 LSRVFFASWRVVLEGGIDPILRGLMATPAKLNRQNQIAVDEIRERLFEQVMRIGLDLPAL Sbjct: 361 LSRVFFASWRVVLEGGIDPILRGLMATPAKLNRQNQIAVDEIRERLFEQVMRIGLDLPAL 420 Query: 587 NMQRSRDHGLPGYNAWRRFCGLPQPETVGQLGTVLRNLKLARKLMEQYGTPNNIDIWMGG 646 NMQRSRDHGLPGYNAWRRFCGLPQPETVGQLGTVLRNLKLARKLMEQYGTPNNIDIWMGG Sbjct: 421 NMQRSRDHGLPGYNAWRRFCGLPQPETVGQLGTVLRNLKLARKLMEQYGTPNNIDIWMGG 480 Query: 647 VSEPLKRKGRVGPLLACIIGTQFRKLRDGDRFWWENEGVFSMQQRQALAQISLPRIICDN 706 VSEPLKRKGRVGPLLACIIGTQFRKLRDGDRFWWENEGVFSMQQRQALAQISLPRIICDN Sbjct: 481 VSEPLKRKGRVGPLLACIIGTQFRKLRDGDRFWWENEGVFSMQQRQALAQISLPRIICDN 540 Query: 707 TGITTVSKNNIFMSNSYPRDFVNCSTLPALNLASWRE 743 TGITTVSKNNIFMSNSYPRDFVNCSTLPALNLASWRE Sbjct: 541 TGITTVSKNNIFMSNSYPRDFVNCSTLPALNLASWRE 577 >3ERH-A nrPDB Length = 595 Score = 874 bits (2257), Expect = 0.0, Method: Composition-based stats. Identities = 335/589 (56%), Positives = 430/589 (73%), Gaps = 7/589 (1%) Query: 157 GCAYQDVGVTCPEQDKYRTITGMCNNRRSPTLGASNRAFVRWLPAEYEDGFSLPYGWTPG 216 GC V C E YRTITG CNNRRSP LGA+NRA RWLPAEYEDG +LP+GWT Sbjct: 5 GCGAPVPLVKCDENSPYRTITGDCNNRRSPALGAANRALARWLPAEYEDGLALPFGWTQR 64 Query: 217 VKRNGFPVALARAVSNEIVRFPTDQLTPDQERSLMFMQWGQLLDHDLDFTPEPAARASFV 276 RNGF V LAR VSN+IV + ++ DQ RSL+FMQWGQ++DHDLDF PE ++ Sbjct: 65 KTRNGFRVPLAREVSNKIVGYLDEEGVLDQNRSLLFMQWGQIVDHDLDFAPETELGSNEH 124 Query: 277 TGVNCETSCVQQPPCFPLKIPPNDPRIKNQADCIPFFRS---CPACPGSNITIRNQINAL 333 + CE C+Q CFP+ P NDP++K Q C+PFFR+ CP P ++ R QINA+ Sbjct: 125 SKTQCEEYCIQGDNCFPIMFPKNDPKLKTQGKCMPFFRAGFVCPTPPYQSLA-REQINAV 183 Query: 334 TSFVDASMVYGSEEPLARNLRNMSNQLGLLAVNQRFQDNGRALLPFDNLHDDPCLLTNRS 393 TSF+DAS+VYGSE LA LRN+S+ LGL+AVNQ D+G A LPF+N PC N + Sbjct: 184 TSFLDASLVYGSEPSLASRLRNLSSPLGLMAVNQEAWDHGLAYLPFNNKKPSPCEFINTT 243 Query: 394 ARIPCFLAGDTRSSEMPELTSMHTLLLREHNRLATELKSLNPRWDGERLYQEARKIVGAM 453 AR+PCFLAGD R+SE L + HTLLLREHNRLA ELK LNP W+GE+LYQEARKI+GA Sbjct: 244 ARVPCFLAGDFRASEQILLATAHTLLLREHNRLARELKKLNPHWNGEKLYQEARKILGAF 303 Query: 454 VQIITYRDYLPLVLGPTAMRKYLPTYRSYNDSVDPRIANVFTNAFRYGHTLIQPFMFRLD 513 +QIIT+RDYLP+VLG M+K++P Y+ YN+SVDPRI+NVFT AFR+GH + + RLD Sbjct: 304 IQIITFRDYLPIVLGS-EMQKWIPPYQGYNNSVDPRISNVFTFAFRFGHMEVPSTVSRLD 362 Query: 514 NRYQPMEPNPRVPLSRVFFASWRVVLEGGIDPILRGLMATPAKLNRQNQIAVDEIRERLF 573 YQP P +PL +FF +WR++ +GGIDP+ RGL+A +KL Q+++ E+R +LF Sbjct: 363 ENYQPWGPEAELPLHTLFFNTWRIIKDGGIDPLTRGLLAKKSKLMNQDKMVTSELRNKLF 422 Query: 574 EQVMRI-GLDLPALNMQRSRDHGLPGYNAWRRFCGLPQPETVGQLGTVLRNLKLARKLME 632 + +I G DL A+N+QR RDHG+PGYN+WR FCGL QP+T+ L TVL+N LA+KLM+ Sbjct: 423 QPTHKIHGFDLAAINLQRCRDHGMPGYNSWRGFCGLSQPKTLKGLQTVLKNKILAKKLMD 482 Query: 633 QYGTPNNIDIWMGGVSEPLKRKGRVGPLLACIIGTQFRKLRDGDRFWWENEGVFSMQQRQ 692 Y TP+NIDIW+GG +EP+ +GRVGPLLAC++G QF+++RDGDRFWWEN GVF+ +QR Sbjct: 483 LYKTPDNIDIWIGGNAEPMVERGRVGPLLACLLGRQFQQIRDGDRFWWENPGVFTEKQRD 542 Query: 693 ALAQISLPRIICDNTGITTVSKNNIFMSNSYPRDFVNCSTLPALNLASW 741 +L + S R+ICDNT IT V + F +N+YP DFV+CST+ L+L+ W Sbjct: 543 SLQKFSFSRLICDNTHITKVPL-HAFQANNYPHDFVDCSTVDKLDLSPW 590 >1CXP-C nrPDB Length = 466 Score = 748 bits (1932), Expect = 0.0, Method: Composition-based stats. Identities = 466/466 (100%), Positives = 466/466 (100%) Query: 279 VNCETSCVQQPPCFPLKIPPNDPRIKNQADCIPFFRSCPACPGSNITIRNQINALTSFVD 338 VNCETSCVQQPPCFPLKIPPNDPRIKNQADCIPFFRSCPACPGSNITIRNQINALTSFVD Sbjct: 1 VNCETSCVQQPPCFPLKIPPNDPRIKNQADCIPFFRSCPACPGSNITIRNQINALTSFVD 60 Query: 339 ASMVYGSEEPLARNLRNMSNQLGLLAVNQRFQDNGRALLPFDNLHDDPCLLTNRSARIPC 398 ASMVYGSEEPLARNLRNMSNQLGLLAVNQRFQDNGRALLPFDNLHDDPCLLTNRSARIPC Sbjct: 61 ASMVYGSEEPLARNLRNMSNQLGLLAVNQRFQDNGRALLPFDNLHDDPCLLTNRSARIPC 120 Query: 399 FLAGDTRSSEMPELTSMHTLLLREHNRLATELKSLNPRWDGERLYQEARKIVGAMVQIIT 458 FLAGDTRSSEMPELTSMHTLLLREHNRLATELKSLNPRWDGERLYQEARKIVGAMVQIIT Sbjct: 121 FLAGDTRSSEMPELTSMHTLLLREHNRLATELKSLNPRWDGERLYQEARKIVGAMVQIIT 180 Query: 459 YRDYLPLVLGPTAMRKYLPTYRSYNDSVDPRIANVFTNAFRYGHTLIQPFMFRLDNRYQP 518 YRDYLPLVLGPTAMRKYLPTYRSYNDSVDPRIANVFTNAFRYGHTLIQPFMFRLDNRYQP Sbjct: 181 YRDYLPLVLGPTAMRKYLPTYRSYNDSVDPRIANVFTNAFRYGHTLIQPFMFRLDNRYQP 240 Query: 519 MEPNPRVPLSRVFFASWRVVLEGGIDPILRGLMATPAKLNRQNQIAVDEIRERLFEQVMR 578 MEPNPRVPLSRVFFASWRVVLEGGIDPILRGLMATPAKLNRQNQIAVDEIRERLFEQVMR Sbjct: 241 MEPNPRVPLSRVFFASWRVVLEGGIDPILRGLMATPAKLNRQNQIAVDEIRERLFEQVMR 300 Query: 579 IGLDLPALNMQRSRDHGLPGYNAWRRFCGLPQPETVGQLGTVLRNLKLARKLMEQYGTPN 638 IGLDLPALNMQRSRDHGLPGYNAWRRFCGLPQPETVGQLGTVLRNLKLARKLMEQYGTPN Sbjct: 301 IGLDLPALNMQRSRDHGLPGYNAWRRFCGLPQPETVGQLGTVLRNLKLARKLMEQYGTPN 360 Query: 639 NIDIWMGGVSEPLKRKGRVGPLLACIIGTQFRKLRDGDRFWWENEGVFSMQQRQALAQIS 698 NIDIWMGGVSEPLKRKGRVGPLLACIIGTQFRKLRDGDRFWWENEGVFSMQQRQALAQIS Sbjct: 361 NIDIWMGGVSEPLKRKGRVGPLLACIIGTQFRKLRDGDRFWWENEGVFSMQQRQALAQIS 420 Query: 699 LPRIICDNTGITTVSKNNIFMSNSYPRDFVNCSTLPALNLASWREA 744 LPRIICDNTGITTVSKNNIFMSNSYPRDFVNCSTLPALNLASWREA Sbjct: 421 LPRIICDNTGITTVSKNNIFMSNSYPRDFVNCSTLPALNLASWREA 466 >6ERC-A nrPDB Length = 511 Score = 537 bits (1382), Expect = e-153, Method: Composition-based stats. Identities = 162/546 (29%), Positives = 263/546 (48%), Gaps = 106/546 (19%) Query: 172 KYRTITGMCNNRRSPTLGASNRAFVRWL-PAEYEDGFSLPYGWTPGVKRNGFPVAL---A 227 ++R+ TG NN+++P G+ F+R P ++ +NGFP + Sbjct: 3 EFRSYTGEGNNKQNPKQGSIFTPFIRLANPIKF--------------NKNGFPNITNQPS 48 Query: 228 RAVSNEIVRFPTDQLTPDQERSLMFMQWGQLLDHDLDFT-PEPAARASFVTGVNCETSCV 286 RA+SN I T + + + MF WGQ L H++ + PEP + Sbjct: 49 RAISNIIFDQQT-HIGSKEHLTDMFNMWGQFLIHNMALSKPEPNS--------------- 92 Query: 287 QQPPCFPLKIPPNDPR-----IKNQADCIPFFRS----CPACPGSNITIRN-----QINA 332 +P+K+P D I N+ + +FR+ P G + + QIN+ Sbjct: 93 -----WPIKVPKCDQYFDPACIGNKT--MNYFRTRATEVPCDVGKTVVDEDGKCYEQINS 145 Query: 333 LTSFVDASMVYGSEEPLARNLRNMSNQLGLLAVNQRFQ-----------DNGRALLPFDN 381 L S++D +++YG+ E + +NLR++S + V DN L P D Sbjct: 146 LGSYIDGNVLYGNSEEICKNLRSLSGGEMKMTVTDVGDLPPKNVPGVPMDNDANLFPIDQ 205 Query: 382 LHDDPCLLTNRSARIPCFLAGDTRSSEMPELTSMHTLLLREHNRLATELKSLNPRWDGER 441 L+ G+ R +E P L S+HTLLLR+HNRLA + L+P WD ER Sbjct: 206 LYS----------------VGERRGNENPGLLSIHTLLLRDHNRLARKFARLHPEWDDER 249 Query: 442 LYQEARKIVGAMVQIITYRDYLPLVLGPTAMRKYLPTYRSYNDSVDPRIANVFTN-AFRY 500 ++Q++R + +Q ITY +YLP LG P+Y Y+ +V+ +++N FT AFR+ Sbjct: 250 VFQQSRSCIIEQIQKITYDEYLPTTLGS------FPSYTGYDANVNAQVSNEFTTTAFRF 303 Query: 501 GHTLIQPFMFRLDNRYQPMEPNPRVPLSRVFFASWRVVLEGGIDPILRGLMATPAKLNRQ 560 GH+ + PFM ++P +P+ +F L G++P++RGL+ +N + Sbjct: 304 GHSEVGPFMEYYSENGTRLQP---LPIKFSYFNPH--ALNRGVEPLIRGLI-----INEE 353 Query: 561 NQI---AVDEIRERLFEQVMRIGLDLPALNMQRSRDHGLPGYNAWRRFCGLPQPETVGQL 617 I + ++R LF + + GLDL + N+QR+RDHG+P YN+ RR GL V Sbjct: 354 ENIDIYMISDLRNFLFGKPGQGGLDLASRNLQRNRDHGIPPYNSLRRQLGL---RPVQTW 410 Query: 618 GTVLRNLKLARKLMEQYGTPNNIDIWMGGVSEPLKRKGRVGPLLACIIGTQFRKLRDGDR 677 + + ++ +L Y + ++ID ++GG++E VG II QF + R GDR Sbjct: 411 SDITSDPQIQNRLKNAYKSVDDIDSYVGGLAEDHMEGSCVGQTFYLIIYEQFFRTRAGDR 470 Query: 678 FWWENE 683 FW+E Sbjct: 471 FWYETP 476 >4KVK-A nrPDB Length = 621 Score = 359 bits (922), Expect = 2e-99, Method: Composition-based stats. Identities = 115/602 (19%), Positives = 197/602 (32%), Gaps = 120/602 (19%) Query: 131 RSLWRR---PFNV------TDVLTPAQLNVLSKSSGCAYQDVGVTCPEQDKYRTITGMCN 181 R+LW + P + +L L + +SS A D P++ YRT G N Sbjct: 41 RNLWHKVPVPIGLLYLNTRRTLLEKYNLLAVGRSSHGALFD-----PKEFLYRTEDGKYN 95 Query: 182 NRRSPTLGASNRAFVRWL-PAEYEDGFSLPYGWTPGVKRNGFPVALARAVSNEIVRFPTD 240 + + G+ N F R + P + +D P + K LAR + Sbjct: 96 DPHNAEAGSQNTFFGRNMEPVDQQDELMSPDPFVVATK------LLARREYKDT------ 143 Query: 241 QLTPDQERSLMFMQWGQLLDHDLDFTPEPAARASFVTGVNCETSCVQQPPCFPLKIPPND 300 ++ +++ W Q + HD E + G+ + P K P Sbjct: 144 ----GKQFNILAAAWIQFMVHDWMDHMEDTGQ----IGITAPKEVANECPLKSFKFHPT- 194 Query: 301 PRIKNQADCIPFFRSCPACPGSNITIRNQINALTSFVDASMVYGSEEPLARNLRNMSNQL 360 + +D I N T++ D S VYG+ E A LR + Sbjct: 195 KELPTNSDGIKI---------------GHYNIRTAWWDGSAVYGNNEERAEKLRTYVD-- 237 Query: 361 GLLAVNQRFQDNGRALLPFDNLHDDPCLLTNRSARIPCFLAGDTRSSEMPELTSMHTLLL 420 G L + DD LL + L+GD R+S ++ + L + Sbjct: 238 GKLVIG-----------------DDGLLLHKENG---VALSGDIRNS-WAGVSILQALFV 276 Query: 421 REHNRLATELKSLNPRWDGERLYQEARKIVGAMVQIITYRDYLPLVLGPTAMRKYL---- 476 +EHN + +K +P E LY+ A+ + A++ + D+ +L MR + Sbjct: 277 KEHNAVCDAIKEEHPNLSDEELYRYAKLVTSAVIAKVHTIDWTVELLKTKTMRAAMRANW 336 Query: 477 -----------------PTYRSY-------NDSVDPRIANVFTNAFRYGHTLIQPFMFRL 512 P N V + FT+ +R H+LI + Sbjct: 337 YGLLGKKIKDTFGHIGGPILGGLVGLKKPNNHGVPYSLTEEFTSVYRM-HSLIPSTLKLR 395 Query: 513 DNRYQPMEPNPRVPLSRVFFASWRVVLEGGIDPILRGLMATPAKLNRQNQIAVDEIRER- 571 D QP N P ++ G + + + A E+ Sbjct: 396 DPTGQPDANNS--PPCLEDIDIGEMIGLKGEEQLSKIGFEKQALSMGYQACGALELWNYP 453 Query: 572 ----------LFEQVMRIGLDLPALNMQRSRDHGLPGYNAWRRFCGLPQPETVGQLGTVL 621 L +DL AL + R R+ +P YN +RR L + + Sbjct: 454 SFFRNLIPQNLDGTNRSDRIDLAALEVYRDRERSVPRYNEFRRRLFLI---PIKSWEDLT 510 Query: 622 RNLKLARKLMEQYG-TPNNIDIWMGGVSEPLKRKGRVGPLLACIIGTQFRKLRDGDRFWW 680 + + YG +D+ +G ++E + + I + + DRF+ Sbjct: 511 SDKDAIETIRAIYGDDVEKLDLLVGLMAEKKIKGFAISETAFNIFILMASRRLEADRFFT 570 Query: 681 EN 682 N Sbjct: 571 SN 572 >5WBE-A nrPDB Length = 600 Score = 259 bits (661), Expect = 3e-69, Method: Composition-based stats. Identities = 73/323 (22%), Positives = 131/323 (40%), Gaps = 40/323 (12%) Query: 332 ALTSFVDASMVYGSEEPLARNLRNMSNQLGLLAVNQRFQDNGRALLPFDNLHDDPCLLTN 391 AL VD +YG LR + + NG P ++ + P L+ Sbjct: 223 ALGHGVDLGHIYGDNLERQYQLRLFKDGKLKYQM-----LNGEVYPP--SVEEAPVLMHY 275 Query: 392 RSARIPC--FLAGDTRSSEMPELTSMHTLLLREHNRLATELKSLNPRWDGERLYQEARKI 449 P G +P L T+ LREHNR+ LK+ +P W E+L+Q AR I Sbjct: 276 PRGIPPQSQMAVGQEVFGLLPGLMLYATIWLREHNRVCDLLKAEHPTWGDEQLFQTARLI 335 Query: 450 -VGAMVQIITYRDYLPLVLGPTAMRKYLPTYR-SYNDSVDPRIANVFTNAFRYGHTLIQP 507 +G ++I+ +Y+ + G K+ P RIA F + H L+ P Sbjct: 336 LIGETIKIVI-EEYVQQLSGYFLQLKFDPELLFGAQFQYRNRIAMEFNQ-LYHWHPLM-P 392 Query: 508 FMFRLDNRYQPMEPNPRVPLSRVFFASWRVVLEGGIDPILRGLMATPA-KLNRQNQIAVD 566 FR+ P+ F + ++++ G++ ++ PA ++ I Sbjct: 393 DSFRV---------GPQDYSYEQFLFNTSMLVDYGVEALVDAFSRQPAGRIGGGRNID-- 441 Query: 567 EIRERLFEQVMRIGLDLPALNMQRSRDHGLPGYNAWRRFCGLPQPETVGQLGTVLRNLKL 626 ++ + +D+ ++ SR L +N +R+ G+ +P T Q T + ++ Sbjct: 442 -------HHILHVAVDV----IKESRVLRLQPFNEYRKRFGM-KPYTSFQELTGEK--EM 487 Query: 627 ARKLMEQYGTPNNIDIWMGGVSE 649 A +L E YG + ++ + G + E Sbjct: 488 AAELEELYGDIDALEFYPGLLLE 510 >5F1A-A nrPDB Length = 553 Score = 246 bits (628), Expect = 2e-65, Method: Composition-based stats. Identities = 69/337 (20%), Positives = 123/337 (36%), Gaps = 42/337 (12%) Query: 331 NALTSFVDASMVYGSEEPLARNLRNMSNQLGLLAVNQRFQDNGRALLPFDNLHDDPCLLT 390 N L VD + +YG R LR + + G P + Sbjct: 191 NGLGHGVDLNHIYGETLARQRKLRLFKDGKMKYQIID-----GEMYPPTVKDTQAEMIYP 245 Query: 391 NRSARIPCFLAGDTRSSEMPELTSMHTLLLREHNRLATELKSLNPRWDGERLYQEARKI- 449 + F G +P L T+ LREHNR+ LK +P W E+L+Q +R I Sbjct: 246 PQVPEHLRFAVGQEVFGLVPGLMMYATIWLREHNRVCDVLKQEHPEWGDEQLFQTSRLIL 305 Query: 450 VGAMVQIITYRDYLPLVLGPTAMRKYLPTYRSYNDSV--DPRIANVFTNAFRYGHTLIQP 507 +G ++I+ DY+ + G K+ P +N RIA F N + H L+ P Sbjct: 306 IGETIKIVI-EDYVQHLSGYHFKLKFDPELL-FNKQFQYQNRIAAEF-NTLYHWHPLL-P 361 Query: 508 FMFRLDNRYQPMEPNPRVPLSRVFFASWRVVLEGGIDPILRGL---MATPAKLNRQNQIA 564 F++ ++ + F + ++LE GI + +A R A Sbjct: 362 DTFQIHDQKYNYQ---------QFIYNNSILLEHGITQFVESFTRQIAGRVAGGRNVPPA 412 Query: 565 VDEIRERLFEQVMRIGLDLPALNMQRSRDHGLPGYNAWRRFCGLPQPETVGQLGTVLRNL 624 V ++ + +Q + + + N R R L Y ++ G Sbjct: 413 VQKVSQASIDQSRQ--MKYQSFNEYRKR-FMLKPYESFEELTG---------------EK 454 Query: 625 KLARKLMEQYGTPNNIDIWMGGVSEPLKRKGRVGPLL 661 +++ +L YG + ++++ + E + G + Sbjct: 455 EMSAELEALYGDIDAVELYPALLVEKPRPDAIFGETM 491 >3QH0-A nrPDB Length = 610 Score = 246 bits (627), Expect = 3e-65, Method: Composition-based stats. Identities = 69/335 (20%), Positives = 120/335 (35%), Gaps = 42/335 (12%) Query: 333 LTSFVDASMVYGSEEPLARNLRNMSNQLGLLAVNQRFQDNGRALLPFDNLHDDPCLLTNR 392 L VD + +YG LR + V G P + Sbjct: 216 LGHGVDLNHIYGETLDRQHKLRLFKDGKLKYQV-----IGGEVYPPTVKDTQVEMIYPPH 270 Query: 393 SARIPCFLAGDTRSSEMPELTSMHTLLLREHNRLATELKSLNPRWDGERLYQEARKI-VG 451 F G +P L T+ LREHNR+ LK +P W E+L+Q +R I +G Sbjct: 271 IPENLQFAVGQEVFGLVPGLMMYATIWLREHNRVCDILKQEHPEWGDEQLFQTSRLILIG 330 Query: 452 AMVQIITYRDYLPLVLGPTAMRKYLPTYRSYNDSV--DPRIANVFTNAFRYGHTLIQPFM 509 ++I+ DY+ + G K+ P +N RIA+ F N + H L+ P Sbjct: 331 ETIKIVI-EDYVQHLSGYHFKLKFDPELL-FNQQFQYQNRIASEF-NTLYHWHPLL-PDT 386 Query: 510 FRLDNRYQPMEPNPRVPLSRVFFASWRVVLEGGIDPILRGL---MATPAKLNRQNQIAVD 566 F ++++ + F + ++LE G+ + +A R IAV Sbjct: 387 FNIEDQEYSF---------KQFLYNNSILLEHGLTQFVESFTRQIAGRVAGGRNVPIAVQ 437 Query: 567 EIRERLFEQVMRIGLDLPALNMQRSRDHGLPGYNAWRRFCGLPQPETVGQLGTVLRNLKL 626 + + +Q + +LN R R L Y ++ G ++ Sbjct: 438 AVAKASIDQSRE--MKYQSLNEYRKR-FSLKPYTSFEELTG---------------EKEM 479 Query: 627 ARKLMEQYGTPNNIDIWMGGVSEPLKRKGRVGPLL 661 A +L Y + ++++ + E + G + Sbjct: 480 AAELKALYSDIDVMELYPALLVEKPRPDAIFGETM 514 >4HHR-A nrPDB Length = 652 Score = 224 bits (571), Expect = 9e-59, Method: Composition-based stats. Identities = 96/587 (16%), Positives = 192/587 (32%), Gaps = 110/587 (18%) Query: 145 TPAQLNVLSKSSGCAYQDVGVTCPEQDKYRTITGMCNNRRSPTLGASNRAFVRWLP-AEY 203 L + ++ D P YRT G N+ + +G+ N F R P + Sbjct: 79 QQYNLLNVGQTPTGIRFD-----PANYPYRTADGKFNDPFNEGVGSQNSFFGRNCPPVDQ 133 Query: 204 EDGFSLPYGWTPGVKRNGFPVALARAVSNEIVRFPTDQLTPDQERSLMFMQWGQLLDHDL 263 + P K L R + ++ +++ W Q + HD Sbjct: 134 KSKLRRPDPMVVATK------LLGRKKFIDT----------GKQFNMIAASWIQFMIHDW 177 Query: 264 DFTPEPAARASFVTGVNCETSCVQQPPCFPLKIPPNDPRIKNQADCIPFFRSCPACPGSN 323 E + + + P + + G Sbjct: 178 IDHLEDTHQ----IELVAPKEVASKCPLSSFRFLKT-KEVPT---------------GFF 217 Query: 324 ITIRNQINALTSFVDASMVYGSEEPLARNLRNMSNQLGLLAVNQRFQDNGRALLPFDNLH 383 N T + D+S++YGS +R + G L +++ Sbjct: 218 EIKTGSQNIRTPWWDSSVIYGSNSKTLDRVRTYKD--GKLKISEE--------------- 260 Query: 384 DDPCLLTNRSARIPCFLAGDTRSSEMPELTSMHTLLLREHNRLATELKSLNPRWDGERLY 443 LL + ++GD R+S ++++ L ++EHN + LK + + E LY Sbjct: 261 -TGLLLHDEDG---LAISGDIRNS-WAGVSALQALFIKEHNAVCDALKDEDDDLEDEDLY 315 Query: 444 QEARKIVGAMVQIITYRDYLPLVLGPTAMR-------------KYLPTY----------- 479 + AR + A+V I D+ +L + K+ ++ Sbjct: 316 RYARLVTSAVVAKIHTIDWTVQLLKTDTLLAGMRANWYGLLGKKFKDSFGHAGSSILGGV 375 Query: 480 ----RSYNDSVDPRIANVFTNAFRYGHTLIQPFMFRLDNRYQPMEPNPRVPLSRVFFASW 535 + N V + FT+ +R H+L+ P + + N +PL + Sbjct: 376 VGMKKPQNHGVPYSLTEDFTSVYRM-HSLL-PDQLHILDIDDVPGTNKSLPLIQEISMRD 433 Query: 536 RVVLEGGIDPILRGLMATPAKLNRQNQIAVDEIRERLF----------EQVMRIGLDLPA 585 + +G G + Q A++ + ++ Q +DL A Sbjct: 434 LIGRKGEETMSHIGFTKLMVSMGHQASGALELMNYPMWLRDIVPHDPNGQARPDHVDLAA 493 Query: 586 LNMQRSRDHGLPGYNAWRRFCGLPQPETVGQLGTVLRNLKLARKLMEQY-GTPNNIDIWM 644 L + R R+ +P YN +RR + + + + + + L + Y G +D+ + Sbjct: 494 LEIYRDRERSVPRYNEFRRSMFMI---PITKWEDLTEDEEAIEVLDDVYDGDVEELDLLV 550 Query: 645 GGVSEPLKRKGRVGPLLACIIGTQFRKLRDGDRFWWE--NEGVFSMQ 689 G ++E + + I + + DRF+ NE +++ + Sbjct: 551 GLMAEKKIKGFAISETAFYIFLIMATRRLEADRFFTSDFNETIYTKK 597 >4EJX-B nrPDB Length = 114 Score = 182 bits (461), Expect = 5e-46, Method: Composition-based stats. Identities = 114/114 (100%), Positives = 114/114 (100%) Query: 165 VTCPEQDKYRTITGMCNNRRSPTLGASNRAFVRWLPAEYEDGFSLPYGWTPGVKRNGFPV 224 VTCPEQDKYRTITGMCNNRRSPTLGASNRAFVRWLPAEYEDGFSLPYGWTPGVKRNGFPV Sbjct: 1 VTCPEQDKYRTITGMCNNRRSPTLGASNRAFVRWLPAEYEDGFSLPYGWTPGVKRNGFPV 60 Query: 225 ALARAVSNEIVRFPTDQLTPDQERSLMFMQWGQLLDHDLDFTPEPAARASFVTG 278 ALARAVSNEIVRFPTDQLTPDQERSLMFMQWGQLLDHDLDFTPEPAARASFVTG Sbjct: 61 ALARAVSNEIVRFPTDQLTPDQERSLMFMQWGQLLDHDLDFTPEPAARASFVTG 114 >5CEF-A nrPDB Length = 375 Score = 32.1 bits (71), Expect = 0.83, Method: Composition-based stats. Identities = 15/82 (18%), Positives = 25/82 (30%), Gaps = 4/82 (4%) Query: 215 PGVKRNGFPVALARAVSNEIVRFPTDQLTPDQERSLMFMQWGQLLDHDLDFTPEPAARAS 274 VK P V N + D Q + ++ HD P+P + Sbjct: 261 VSVKFARSPPPSVAEVENAFREYTCDA----QHLGVPSAPAQAIVVHDAPDRPQPRLDKN 316 Query: 275 FVTGVNCETSCVQQPPCFPLKI 296 G +++ P F +K Sbjct: 317 LHNGACVSVGRIRECPVFDIKF 338 >3UP8-A nrPDB Length = 298 Score = 32.1 bits (71), Expect = 1.0, Method: Composition-based stats. Identities = 23/136 (16%), Positives = 49/136 (36%), Gaps = 23/136 (16%) Query: 337 VDASMVYGSEEPLARNLRNMSNQLGLLAVNQRFQ-DN----------GRALLPFDNLHDD 385 VD + +YG+E + ++ + + + DN +L H D Sbjct: 64 VDTAQIYGNEAEVGEAIQKSGIPRADVFLTTKVWVDNYRHDAFIASVDESLRKLRTDHVD 123 Query: 386 PCLLTNRSARIPCF----LAGDTRSS---EMPELTSMHTLLLREHNRLATE-----LKSL 433 LL + +P + R++ +++ +T + E RL+ Sbjct: 124 LLLLHWPGSDVPMAERIGALNEVRNAGKVRHIGISNFNTTQMEEAARLSDAPIATNQVEY 183 Query: 434 NPRWDGERLYQEARKI 449 +P D ++ Q AR++ Sbjct: 184 HPYLDQTKVLQTARRL 199 >3EVT-A nrPDB Length = 324 Score = 31.0 bits (68), Expect = 2.1, Method: Composition-based stats. Identities = 20/115 (17%), Positives = 38/115 (33%), Gaps = 4/115 (3%) Query: 341 MVYGSEEPLARNLRNMSNQLGLLAVNQRFQDNGRALLPFDNLHDDPCLLTNRSARIPCFL 400 ++YG+ L L +NQL + V D LP L ++ N S + Sbjct: 43 VMYGNHPLLKTILARPTNQLKFVQVISAGVD----YLPLKALQAAGVVVANTSGIHADAI 98 Query: 401 AGDTRSSEMPELTSMHTLLLREHNRLATELKSLNPRWDGERLYQEARKIVGAMVQ 455 + ++ + + H L + L G++L +G + Sbjct: 99 SESVLAAMLSVVRGYHAAWLNQRGARQWALPMTTSTLTGQQLLIYGTGQIGQSLA 153 >5U8R-A nrPDB Length = 885 Score = 31.0 bits (68), Expect = 2.3, Method: Composition-based stats. Identities = 19/53 (35%), Positives = 24/53 (45%), Gaps = 3/53 (5%) Query: 172 KYRTITGMCNNRRSPTLG--ASNRAFVRWLPAEYEDGFSLPYGWTPGVKRNGF 222 YR CN+ + LG ASN F R +PAE D P W P + + F Sbjct: 748 LYRIDIHSCNH-EAEKLGCSASNFVFARTMPAEGADDIPGPVTWEPRPENSIF 799 >1FCV-A nrPDB Length = 350 Score = 29.8 bits (65), Expect = 4.6, Method: Composition-based stats. Identities = 7/20 (35%), Positives = 13/20 (65%) Query: 428 TELKSLNPRWDGERLYQEAR 447 ++ +P WD +R+ QEA+ Sbjct: 135 EVVRREHPFWDDQRVEQEAK 154 >4YK4-E nrPDB Length = 230 Score = 29.8 bits (65), Expect = 4.8, Method: Composition-based stats. Identities = 13/82 (15%), Positives = 23/82 (28%), Gaps = 5/82 (6%) Query: 450 VGAMVQIITYRDYLPLVLGPTAMRKYLPTYRSYNDSVDPRIANVFTNAFRYGHTLIQPFM 509 +G + + V+ RK+ P P++ + Y L Sbjct: 145 IGDQRALYHTENAYVSVVSSHYSRKFTPEIAK-----RPKVRDQEGRINYYWTLLEPGDT 199 Query: 510 FRLDNRYQPMEPNPRVPLSRVF 531 + + P LSR F Sbjct: 200 IIFEANGNLIAPRYAFALSRGF 221 >3PEU-B nrPDB Length = 297 Score = 29.8 bits (65), Expect = 5.1, Method: Composition-based stats. Identities = 16/81 (19%), Positives = 27/81 (33%), Gaps = 18/81 (22%) Query: 314 RSCPACPGSNITIRNQINALTSFVDASMV-----YGSE---------EPLARNL--RNMS 357 R C N+ L S+ DA+ V YG++ E L + + Sbjct: 215 RICNTPL--NLITNTHFVILGSWWDAAAVQFLQAYGNQASKLLILIGEELTSRMAEKKYV 272 Query: 358 NQLGLLAVNQRFQDNGRALLP 378 L + + +Q+N P Sbjct: 273 GAARLRILLEAWQNNNMESFP 293 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.308 0.119 0.313 Lambda K H 0.267 0.0370 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 24,759,719 Number of Sequences: 36641 Number of extensions: 911354 Number of successful extensions: 2422 Number of sequences better than 10.0: 21 Number of HSP's better than 10.0 without gapping: 24 Number of HSP's successfully gapped in prelim test: 10 Number of HSP's that attempted gapping in prelim test: 2337 Number of HSP's gapped (non-prelim): 39 length of query: 745 length of database: 10,336,785 effective HSP length: 104 effective length of query: 641 effective length of database: 6,526,121 effective search space: 4183243561 effective search space used: 4183243561 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.3 bits) S2: 63 (29.0 bits)