BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= P04993 (608 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 5LD2-D nrPDB 1242 0.0 3GP8-A nrPDB 139 3e-33 3UPU-A nrPDB 51 2e-06 2WJV-A nrPDB 43 4e-04 6EJ5-A nrPDB 42 5e-04 2XZL-A nrPDB 40 0.003 5FHF-A nrPDB 40 0.003 4B3F-X nrPDB 37 0.028 1ION-A nrPDB 35 0.081 2IS4-A nrPDB 35 0.11 5GNR-A nrPDB 35 0.11 5VHD-D nrPDB 35 0.13 2Z83-A nrPDB 34 0.16 1G3Q-A nrPDB 34 0.18 1QHL-A nrPDB 33 0.26 3EUK-A nrPDB 33 0.47 3M5U-A nrPDB 33 0.53 4I1U-A nrPDB 32 1.0 3UMF-A nrPDB 32 1.1 2FFH-A nrPDB 32 1.1 1T90-A nrPDB 32 1.1 2IY3-A nrPDB 32 1.2 1RJ9-B nrPDB 31 1.3 6R7Z-A nrPDB 31 1.3 3V8B-A nrPDB 31 1.7 1HYQ-A nrPDB 30 2.6 5FHH-A nrPDB 30 2.8 5UJ7-A nrPDB 30 2.9 5UJM-A nrPDB 30 3.0 4XGC-A nrPDB 29 5.6 4YIT-A nrPDB 29 6.6 6AZ1-B nrPDB 28 9.1 1UAA-A nrPDB 28 9.4 >5LD2-D nrPDB Length = 609 Score = 1242 bits (3214), Expect = 0.0, Method: Compositional matrix adjust. Identities = 607/607 (100%), Positives = 607/607 (100%) Query: 2 KLQKQLLEAVEHKQLRPLDVQFALTVAGDEHPAVTLAAALLSHDAGEGHVCLPLSRLENN 61 KLQKQLLEAVEHKQLRPLDVQFALTVAGDEHPAVTLAAALLSHDAGEGHVCLPLSRLENN Sbjct: 3 KLQKQLLEAVEHKQLRPLDVQFALTVAGDEHPAVTLAAALLSHDAGEGHVCLPLSRLENN 62 Query: 62 EASHPLLATCVSEIGELQNWEECLLASQAVSRGDEPTPMILCGDRLYLNRMWCNERTVAR 121 EASHPLLATCVSEIGELQNWEECLLASQAVSRGDEPTPMILCGDRLYLNRMWCNERTVAR Sbjct: 63 EASHPLLATCVSEIGELQNWEECLLASQAVSRGDEPTPMILCGDRLYLNRMWCNERTVAR 122 Query: 122 FFNEVNHAIEVDEALLAQTLDKLFPVSDEINWQKVAAAVALTRRISVISGGPGTGKTTTV 181 FFNEVNHAIEVDEALLAQTLDKLFPVSDEINWQKVAAAVALTRRISVISGGPGTGKTTTV Sbjct: 123 FFNEVNHAIEVDEALLAQTLDKLFPVSDEINWQKVAAAVALTRRISVISGGPGTGKTTTV 182 Query: 182 AKLLAALIQMADGERCRIRLAAPTGKAAARLTESLGKALRQLPLTDEQKKRIPEDASTLH 241 AKLLAALIQMADGERCRIRLAAPTGKAAARLTESLGKALRQLPLTDEQKKRIPEDASTLH Sbjct: 183 AKLLAALIQMADGERCRIRLAAPTGKAAARLTESLGKALRQLPLTDEQKKRIPEDASTLH 242 Query: 242 RLLGAQPGSQRLRHHAGNPLHLDVLVVDEASMIDLPMMSRLIDALPDHARVIFLGDRDQL 301 RLLGAQPGSQRLRHHAGNPLHLDVLVVDEASMIDLPMMSRLIDALPDHARVIFLGDRDQL Sbjct: 243 RLLGAQPGSQRLRHHAGNPLHLDVLVVDEASMIDLPMMSRLIDALPDHARVIFLGDRDQL 302 Query: 302 ASVEAGAVLGDICAYANAGFTAERARQLSRLTGTHVPAGTGTEAASLRDSLCLLQKSYRF 361 ASVEAGAVLGDICAYANAGFTAERARQLSRLTGTHVPAGTGTEAASLRDSLCLLQKSYRF Sbjct: 303 ASVEAGAVLGDICAYANAGFTAERARQLSRLTGTHVPAGTGTEAASLRDSLCLLQKSYRF 362 Query: 362 GSDSGIGQLAAAINRGDKTAVKTVFQQDFTDIEKRLLQSGEDYIAMLEEALAGYGRYLDL 421 GSDSGIGQLAAAINRGDKTAVKTVFQQDFTDIEKRLLQSGEDYIAMLEEALAGYGRYLDL Sbjct: 363 GSDSGIGQLAAAINRGDKTAVKTVFQQDFTDIEKRLLQSGEDYIAMLEEALAGYGRYLDL 422 Query: 422 LQARAEPDLIIQAFNEYQLLCALREGPFGVAGLNERIEQFMQQKRKIHRHPHSRWYEGRP 481 LQARAEPDLIIQAFNEYQLLCALREGPFGVAGLNERIEQFMQQKRKIHRHPHSRWYEGRP Sbjct: 423 LQARAEPDLIIQAFNEYQLLCALREGPFGVAGLNERIEQFMQQKRKIHRHPHSRWYEGRP 482 Query: 482 VMIARNDSALGLFNGDIGIALDRGQGTRVWFAMPDGNIKSVQPSRLPEHETTWAMTVHKS 541 VMIARNDSALGLFNGDIGIALDRGQGTRVWFAMPDGNIKSVQPSRLPEHETTWAMTVHKS Sbjct: 483 VMIARNDSALGLFNGDIGIALDRGQGTRVWFAMPDGNIKSVQPSRLPEHETTWAMTVHKS 542 Query: 542 QGSEFDHAALILPSQRTPVVTRELVYTAVTRARRRLSLYADERILSAAIATRTERRSGLA 601 QGSEFDHAALILPSQRTPVVTRELVYTAVTRARRRLSLYADERILSAAIATRTERRSGLA Sbjct: 543 QGSEFDHAALILPSQRTPVVTRELVYTAVTRARRRLSLYADERILSAAIATRTERRSGLA 602 Query: 602 ALFSSRE 608 ALFSSRE Sbjct: 603 ALFSSRE 609 >3GP8-A nrPDB Length = 574 Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 122/413 (29%), Positives = 182/413 (44%), Gaps = 82/413 (19%) Query: 165 RISVISGGPGTGKTTTVAKLLAALIQMADGERCRIRLAAPTGKAAARLTESLGKALRQLP 224 R+ V++GGPGTGK+TT A+ +A+ + L APTGKAA RL E G+ Sbjct: 205 RLVVLTGGPGTGKSTTTK----AVADLAESLGLEVGLCAPTGKAARRLGEVTGRT----- 255 Query: 225 LTDEQKKRIPEDASTLHRLLGAQPGSQRLRHHAGNPLHLDVLVVDEASMIDLPMMSRLID 284 AST+HRLLG P Q RH+ P D+L+VDE SM+ +M L+ Sbjct: 256 ------------ASTVHRLLGYGP--QGFRHNHLEPAPYDLLIVDEVSMMGDALMLSLLA 301 Query: 285 ALPDHARVIFLGDRDQLASVEAGAVLGDICAYANAGFTAERARQLSRLTGTHVPAGTGTE 344 A+P ARV+ +GD DQL V+AG Sbjct: 302 AVPPGARVLLVGDTDQLPPVDAGLP---------------------------------LL 328 Query: 345 AASLRDSLCLLQKSYRFGSDSGIGQLAAAINRGDKTAVKTVFQQDFTDIEKRLLQSGEDY 404 A + L + YR + + I Q A + G+ A + + T+IE G Sbjct: 329 ALAQAAPTIKLTQVYRQAAKNPIIQAAHGLLHGEAPAWGDK-RLNLTEIEP---DGGARR 384 Query: 405 IAMLEEALAGYGRYLDLLQARAEPDLIIQAFNEYQLLCALREGPFGVAGLNERIEQFMQQ 464 +A++ L G G Q+L +R+GP G+ LN ++ Sbjct: 385 VALMVRELGGPG--------------------AVQVLTPMRKGPLGMDHLNYHLQALFNP 424 Query: 465 KRKIHRHPHSRWYEGRPVMIARNDSALGLFNGDIGIALDRGQGTRVWFAMPDGNIKSVQP 524 R G V+ +ND +FNG +G+ L + +G R+ DGN+ + Sbjct: 425 GEGGVRIAEGEARPGDTVVQTKNDYNNEIFNGTLGMVL-KAEGARLTVDF-DGNVVELTG 482 Query: 525 SRLPEHETTWAMTVHKSQGSEFDHAALILPSQRTPVVTRELVYTAVTRARRRL 577 + L + +A+TVH++QGSE+ +L P+++R LVYTA+TRAR R Sbjct: 483 AELFNLQLGYALTVHRAQGSEWGTVLGVLHEAHMPMLSRNLVYTALTRARDRF 535 >3UPU-A nrPDB Length = 459 Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 50/178 (28%), Positives = 73/178 (41%), Gaps = 29/178 (16%) Query: 156 VAAAVALTRRISVISGGPGTGKTTTVAKLLAALIQMADGERCRIRLAAPTGKAAARLTES 215 V A+ + I+G GTG TT ++ ALI + I LAAPT A L++ Sbjct: 37 VMKAIKEKKHHVTINGPAGTGATTLTKFIIEALISTGE---TGIILAAPTHAAKKILSKL 93 Query: 216 LGKALRQLPLTDEQKKRIPEDASTLHRLLGAQPGSQR---LRHHAGNP--LHLDVLVVDE 270 GK +AST+H +L P + L P VL+ DE Sbjct: 94 SGK-----------------EASTIHSILKINPVTYEENVLFEQKEVPDLAKCRVLICDE 136 Query: 271 ASMIDLPMMSRLIDALPDHARVIFLGDRDQLASVEAGAVLGDICAYANAGFTAERARQ 328 SM D + L+ +P +I +GD Q+ V+ G+ AY + FT + Q Sbjct: 137 VSMYDRKLFKILLSTIPPWCTIIGIGDNKQIRPVDP----GENTAYISPFFTHKDFYQ 190 >2WJV-A nrPDB Length = 800 Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 29/89 (32%), Positives = 46/89 (51%), Gaps = 6/89 (6%) Query: 131 EVDEALLAQTLDKLFP---VSDEINWQKVAAAVALTRRISVISGGPGTGKTTTVAKLLAA 187 EV++ ++ L K F + D + Q A L R +S+I G PGTGKT T A ++ Sbjct: 335 EVEDVIIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSLIQGPPGTGKTVTSATIVYH 394 Query: 188 LIQMADGERCRIRLAAPTGKAAARLTESL 216 L + +G + + AP+ A +LTE + Sbjct: 395 LARQGNGP---VLVCAPSNIAVDQLTEKI 420 >6EJ5-A nrPDB Length = 637 Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 29/89 (32%), Positives = 46/89 (51%), Gaps = 6/89 (6%) Query: 131 EVDEALLAQTLDKLFP---VSDEINWQKVAAAVALTRRISVISGGPGTGKTTTVAKLLAA 187 EV++ ++ L K F + D + Q A L R +S+I G PGTGKT T A ++ Sbjct: 172 EVEDVIIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSLIQGPPGTGKTVTSATIVYH 231 Query: 188 LIQMADGERCRIRLAAPTGKAAARLTESL 216 L + +G + + AP+ A +LTE + Sbjct: 232 LARQGNGP---VLVCAPSNIAVDQLTEKI 257 >2XZL-A nrPDB Length = 802 Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust. Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 6/95 (6%) Query: 154 QKVAAAVALTRRISVISGGPGTGKTTTVAKLLAALIQMADGERCRIRLAAPTGKAAARLT 213 Q A + L R +S+I G PGTGKT T A ++ L ++ + RI + AP+ A L Sbjct: 365 QSNAVSHVLQRPLSLIQGPPGTGKTVTSATIVYHLSKI---HKDRILVCAPSNVAVDHLA 421 Query: 214 ESLGK-ALRQLPLTDEQKKRIPEDAST--LHRLLG 245 L L+ + LT + ++ + S LH L+G Sbjct: 422 AKLRDLGLKVVRLTAKSREDVESSVSNLALHNLVG 456 >5FHF-A nrPDB Length = 433 Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust. Identities = 36/139 (25%), Positives = 55/139 (39%), Gaps = 25/139 (17%) Query: 473 HSRWYEGRPVMIARNDSALGLFNGDIGIA-----------LDRGQGTRV----W----FA 513 H + G VM NDS G +NG +GI +D G+ + W + Sbjct: 274 HLKLRVGARVMSLVNDSLKGYYNGMLGIVTALEDNVITVRMDNGRTIKFERYTWSNTQYT 333 Query: 514 MPDGNIKSVQPSRLPEHETT--WAMTVHKSQGSEFDHAALILPSQRTPVVTRELVYTAVT 571 + D I + + T WA+T+HKSQG FD + + P +Y A++ Sbjct: 334 LKDNEIVKEEIGSCTQFPLTLAWAITIHKSQGLTFDKIIIHVSHTFCP----GQLYVALS 389 Query: 572 RARRRLSLYADERILSAAI 590 R R + +D I I Sbjct: 390 RCRTLEGIVSDAFITKQMI 408 >4B3F-X nrPDB Length = 646 Score = 37.0 bits (84), Expect = 0.028, Method: Compositional matrix adjust. Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 5/65 (7%) Query: 154 QKVAAAVALTRR-ISVISGGPGTGKTTTVAKLLAALIQMADGERCRIRLAAPTGKAAARL 212 QK A AL+++ +++I G PGTGKTTTV +++ ++ ++ AP+ A L Sbjct: 194 QKEAVLFALSQKELAIIHGPPGTGKTTTVVEIILQAVKQG----LKVLCCAPSNIAVDNL 249 Query: 213 TESLG 217 E L Sbjct: 250 VERLA 254 >1ION-A nrPDB Length = 243 Score = 35.4 bits (80), Expect = 0.081, Method: Compositional matrix adjust. Identities = 25/56 (44%), Positives = 29/56 (51%), Gaps = 5/56 (8%) Query: 162 LTRRISVISGGPGTGKTTTVAKLLAALIQMADGERCRIRLAAPTGKAAARLTESLG 217 +TR IS++SG GTGKTT A L AL GE R LA A L+ LG Sbjct: 1 MTRIISIVSGKGGTGKTTVTANLSVAL-----GEMGRKVLAVDGDLTMANLSLVLG 51 >2IS4-A nrPDB Length = 680 Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust. Identities = 40/138 (28%), Positives = 58/138 (42%), Gaps = 15/138 (10%) Query: 149 DEINWQKVAAAVALTRRISVISGGPGTGKTTTVAKLLAALIQMADGERCRIRLAAPTGKA 208 D +N K AVA R ++ G G+GKT + +A L+ + + I T KA Sbjct: 8 DSLN-DKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKA 66 Query: 209 AARLTESLGKALRQLPLTDEQKKRIPEDASTLHRLLGAQPGSQRLRHHAGNPLHLDVLVV 268 AA + +G QL T + + HRLL A HH L D ++ Sbjct: 67 AAEMRHRIG----QLMGTSQGGMWVGTFHGLAHRLLRA--------HHMDANLPQDFQIL 114 Query: 269 DEASMIDLPMMSRLIDAL 286 D S L ++ RLI A+ Sbjct: 115 D--SEDQLRLLKRLIKAM 130 Score = 29.3 bits (64), Expect = 5.0, Method: Compositional matrix adjust. Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 13/64 (20%) Query: 536 MTVHKSQGSEFDHAALI------LPSQRTP------VVTRELVYTAVTRARRRLSL-YAD 582 MT+H ++G EF ++ PSQ + R L Y VTRA ++L+L YA+ Sbjct: 557 MTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVGVTRAMQKLTLTYAE 616 Query: 583 ERIL 586 R L Sbjct: 617 TRRL 620 >5GNR-A nrPDB Length = 421 Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust. Identities = 25/76 (32%), Positives = 37/76 (48%), Gaps = 9/76 (11%) Query: 104 GDRLYLNRMWCNERTVARFFNEVNHAIEVDEALLAQTLDKLFPVSDEINWQKVAAAVALT 163 GD+ YL +E+ + N++ HA+ +D+ L A L ++F W K A AL Sbjct: 120 GDKAYLMTEGSDEKKSVKTVNQLAHALHMDKDLKAGCLVRVF-------WPK--AKCALL 170 Query: 164 RRISVISGGPGTGKTT 179 R V+ PGT TT Sbjct: 171 RDDLVLVDSPGTDVTT 186 >5VHD-D nrPDB Length = 870 Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust. Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 1/65 (1%) Query: 154 QKVAAAVALTRRISVISGGPGTGKTTTVAK-LLAALIQMADGERCRIRLAAPTGKAAARL 212 QK + +++VISG G GKTT V + +L I+ G CRI P +A + Sbjct: 66 QKELVNMIDNHQVTVISGETGCGKTTQVTQFILDNYIERGKGSACRIVCTQPRRISAISV 125 Query: 213 TESLG 217 E + Sbjct: 126 AERVA 130 >2Z83-A nrPDB Length = 459 Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust. Identities = 24/62 (38%), Positives = 36/62 (58%), Gaps = 7/62 (11%) Query: 164 RRISVISGGPGTGKTTTVAKLLAALIQMADGERCRIRLAAPTGKAAARLTESLGKALRQL 223 R+++V+ PG+GKT K+L +I+ A +R R + APT AA + E ALR L Sbjct: 21 RQMTVLDLHPGSGKTR---KILPQIIKDAIQQRLRTAVLAPTRVVAAEMAE----ALRGL 73 Query: 224 PL 225 P+ Sbjct: 74 PV 75 >1G3Q-A nrPDB Length = 237 Score = 34.3 bits (77), Expect = 0.18, Method: Compositional matrix adjust. Identities = 24/56 (42%), Positives = 29/56 (51%), Gaps = 5/56 (8%) Query: 162 LTRRISVISGGPGTGKTTTVAKLLAALIQMADGERCRIRLAAPTGKAAARLTESLG 217 + R IS++SG GTGKTT A L AL G+R R LA A L+ LG Sbjct: 1 MGRIISIVSGKGGTGKTTVTANLSVAL-----GDRGRKVLAVDGDLTMANLSLVLG 51 >1QHL-A nrPDB Length = 227 Score = 33.5 bits (75), Expect = 0.26, Method: Compositional matrix adjust. Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 1/40 (2%) Query: 151 INWQKVAA-AVALTRRISVISGGPGTGKTTTVAKLLAALI 189 INW A L ++ +SGG G GK+TT+A + ALI Sbjct: 13 INWNGFFARTFDLDELVTTLSGGNGAGKSTTMAAFVTALI 52 >3EUK-A nrPDB Length = 483 Score = 32.7 bits (73), Expect = 0.47, Method: Compositional matrix adjust. Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 1/40 (2%) Query: 151 INWQKVAA-AVALTRRISVISGGPGTGKTTTVAKLLAALI 189 INW A ++ +SGG G GK+TT+A + ALI Sbjct: 15 INWNGFFARTFDFDELVTTLSGGNGAGKSTTMAGFVTALI 54 >3M5U-A nrPDB Length = 361 Score = 32.7 bits (73), Expect = 0.53, Method: Compositional matrix adjust. Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 2/65 (3%) Query: 286 LPDHARVIFL--GDRDQLASVEAGAVLGDICAYANAGFTAERARQLSRLTGTHVPAGTGT 343 L D V+FL G Q A + L +C YAN G ++A + +++ G +V + Sbjct: 65 LNDDYEVLFLQGGASLQFAMIPMNLALNGVCEYANTGVWTKKAIKEAQILGVNVKTVASS 124 Query: 344 EAASL 348 E ++ Sbjct: 125 EESNF 129 >4I1U-A nrPDB Length = 210 Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust. Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 14/77 (18%) Query: 169 ISGGPGTGKTTTVAKLLAAL-IQMADGERCRIRLAAPTGKAAARLTESLGKA-------- 219 ++GG G+GK TTVA L AA + D + R+ AP G A + ++ G A Sbjct: 14 LTGGIGSGK-TTVADLFAARGASLVDTDLIAHRITAPAGLAMPAIEQTFGPAFVAADGSL 72 Query: 220 ----LRQLPLTDEQKKR 232 +R L +DE +R Sbjct: 73 DRARMRALIFSDEDARR 89 >3UMF-A nrPDB Length = 217 Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust. Identities = 21/75 (28%), Positives = 33/75 (44%), Gaps = 9/75 (12%) Query: 144 LFPVSDEINWQKVAAAVALTRRISVISGGPGTGKTTTVAKLLAAL----IQMADGERCRI 199 L P + QK+A A ++ + GGPG+GK T KL+ + D R + Sbjct: 14 LVPRGSHMTDQKLAKA-----KVIFVLGGPGSGKGTQCEKLVQKFHFNHLSSGDLLRAEV 68 Query: 200 RLAAPTGKAAARLTE 214 + +P GK + E Sbjct: 69 QSGSPKGKELKAMME 83 >2FFH-A nrPDB Length = 425 Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust. Identities = 57/179 (31%), Positives = 79/179 (44%), Gaps = 34/179 (18%) Query: 133 DEALLAQTLDKLFP--VSDEINWQKVAAAVALTRRISVIS--------GGPGTGKTTTVA 182 +EAL Q L+ L P V ++ + A+ R+ V+ G G+GKTTT A Sbjct: 57 EEALGKQVLESLTPAEVILATVYEALKEALGGEARLPVLKDRNLWFLVGLQGSGKTTTAA 116 Query: 183 KLLAALIQMADGERCRIRLAAPTGKAAARLTESLGKALRQLPLTDEQKKRIPEDASTLHR 242 KL AL G R + +AA T + AAR QL L E K +P L Sbjct: 117 KL--ALYYKGKGRRP-LLVAADTQRPAAR---------EQLRLLGE-KVGVP----VLEV 159 Query: 243 LLGAQPGSQRLRHHAGNPLHL-DVLVVDEAS--MIDLPMM---SRLIDAL-PDHARVIF 294 + G P S R R L D+++VD A ID P+M +RL + L PD ++ Sbjct: 160 MDGESPESIRRRVEEKARLEARDLILVDTAGRLQIDEPLMGELARLKEVLGPDEVLLVL 218 >1T90-A nrPDB Length = 486 Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust. Identities = 15/55 (27%), Positives = 27/55 (49%), Gaps = 4/55 (7%) Query: 512 FAMPDGNIKSVQPSRLPEHETTWAMTVHKSQGSEFDHAALILPSQRTPVVTRELV 566 + P G + + P P W + + G+ F ++ PS+RTP++T +LV Sbjct: 138 YRYPIGVVGGIAPFNFPMMVPCWMFPMAIALGNTF----ILKPSERTPLLTEKLV 188 >2IY3-A nrPDB Length = 432 Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust. Identities = 62/193 (32%), Positives = 84/193 (43%), Gaps = 38/193 (19%) Query: 119 VARFFNEVNHAIEVDEALLAQTLDKLFP--VSDEINWQKVAAAVALTRRISVIS------ 170 VAR F E +EAL Q L+ L P V ++ + A+ R+ V+ Sbjct: 47 VARDFVERVR----EEALGKQVLESLTPAEVILATVYEALKEALGGEARLPVLKDRNLWF 102 Query: 171 --GGPGTGKTTTVAKLLAALIQMADGERCRIRLAAPTGKAAARLTESLGKALRQLPLTDE 228 G G+GKTTT AKL AL G R + +AA T + AAR QL L E Sbjct: 103 LVGLQGSGKTTTAAKL--ALYYKGKGRRP-LLVAADTQRPAAR---------EQLRLLGE 150 Query: 229 QKKRIPEDASTLHRLLGAQPGSQRLRHHAGNPLHL-DVLVVDEAS--MIDLPMM---SRL 282 K +P L + G P S R R L D+++VD A ID P+M +RL Sbjct: 151 -KVGVP----VLEVMDGESPESIRRRVEEKARLEARDLILVDTAGRLQIDEPLMGELARL 205 Query: 283 IDAL-PDHARVIF 294 + L PD ++ Sbjct: 206 KEVLGPDEVLLVL 218 >1RJ9-B nrPDB Length = 300 Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust. Identities = 57/179 (31%), Positives = 79/179 (44%), Gaps = 34/179 (18%) Query: 133 DEALLAQTLDKLFP--VSDEINWQKVAAAVALTRRISVIS--------GGPGTGKTTTVA 182 +EAL Q L+ L P V ++ + A+ R+ V+ G G+GKTTT A Sbjct: 57 EEALGKQVLESLTPAEVILATVYEALKEALGGEARLPVLKDRNLWFLVGLQGSGKTTTAA 116 Query: 183 KLLAALIQMADGERCRIRLAAPTGKAAARLTESLGKALRQLPLTDEQKKRIPEDASTLHR 242 KL AL G R + +AA T + AAR QL L E K +P L Sbjct: 117 KL--ALYYKGKGRRP-LLVAADTQRPAAR---------EQLRLLGE-KVGVP----VLEV 159 Query: 243 LLGAQPGSQRLRHHAGNPLHL-DVLVVDEAS--MIDLPMM---SRLIDAL-PDHARVIF 294 + G P S R R L D+++VD A ID P+M +RL + L PD ++ Sbjct: 160 MDGESPESIRRRVEEKARLEARDLILVDTAGRLQIDEPLMGELARLKEVLGPDEVLLVL 218 >6R7Z-A nrPDB Length = 667 Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust. Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 9/55 (16%) Query: 533 TWAMTVHKSQGSEFDHAALILPSQRTPVVTRELVYTAVTRARRRLSLYADERILS 587 WA+ +H++ GSE+ L +PS ++Y V RL YA E + S Sbjct: 341 VWALGLHENSGSEWTSVLLYVPS---------IIYAIVIEIMNRLYRYAAEFLTS 386 >3V8B-A nrPDB Length = 283 Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust. Identities = 18/43 (41%), Positives = 25/43 (58%), Gaps = 5/43 (11%) Query: 222 QLPLTDEQKKRIPEDASTLHRLLGAQPGSQRLRHHAGNPLHLD 264 Q+P+TD Q R ED + L R L S+R RH G+P+ +D Sbjct: 239 QVPITDGQPGR-SEDVAELIRFLV----SERARHVTGSPVWID 276 >1HYQ-A nrPDB Length = 263 Score = 30.4 bits (67), Expect = 2.6, Method: Compositional matrix adjust. Identities = 16/30 (53%), Positives = 19/30 (63%) Query: 162 LTRRISVISGGPGTGKTTTVAKLLAALIQM 191 + R I+V SG GTGKTT A L AL Q+ Sbjct: 1 MVRTITVASGKGGTGKTTITANLGVALAQL 30 >5FHH-A nrPDB Length = 442 Score = 30.0 bits (66), Expect = 2.8, Method: Compositional matrix adjust. Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 4/44 (9%) Query: 531 ETTWAMTVHKSQGSEFDHAALILPSQRTPVVTRELVYTAVTRAR 574 + WAM++HKSQG D + L V Y A++RAR Sbjct: 348 QLAWAMSIHKSQGMTLDCVEISLGR----VFASGQAYVALSRAR 387 >5UJ7-A nrPDB Length = 391 Score = 30.0 bits (66), Expect = 2.9, Method: Compositional matrix adjust. Identities = 14/26 (53%), Positives = 17/26 (65%) Query: 169 ISGGPGTGKTTTVAKLLAALIQMADG 194 ISG PGTGKT TV +++ L Q A Sbjct: 62 ISGVPGTGKTATVHEVIRCLQQAAQA 87 >5UJM-A nrPDB Length = 522 Score = 30.0 bits (66), Expect = 3.0, Method: Compositional matrix adjust. Identities = 14/26 (53%), Positives = 17/26 (65%) Query: 169 ISGGPGTGKTTTVAKLLAALIQMADG 194 ISG PGTGKT TV +++ L Q A Sbjct: 193 ISGVPGTGKTATVHEVIRCLQQAAQA 218 >4XGC-A nrPDB Length = 393 Score = 29.3 bits (64), Expect = 5.6, Method: Compositional matrix adjust. Identities = 13/24 (54%), Positives = 17/24 (70%) Query: 169 ISGGPGTGKTTTVAKLLAALIQMA 192 +SG PGTGKT TV ++ L +MA Sbjct: 65 VSGVPGTGKTATVTGVIRTLQRMA 88 >4YIT-A nrPDB Length = 287 Score = 28.9 bits (63), Expect = 6.6, Method: Compositional matrix adjust. Identities = 19/75 (25%), Positives = 36/75 (48%) Query: 371 AAAINRGDKTAVKTVFQQDFTDIEKRLLQSGEDYIAMLEEALAGYGRYLDLLQARAEPDL 430 INR V+ FQ + + ++ LL+S +DY+ + + ++G +Q E + Sbjct: 20 VTKINRAIDWRVQLFFQINLHEKDRALLESIKDYLKVGKIHISGKNLVQYRIQTFDELTI 79 Query: 431 IIQAFNEYQLLCALR 445 +I+ EY L+ R Sbjct: 80 LIKHLKEYPLVSKKR 94 >6AZ1-B nrPDB Length = 246 Score = 28.5 bits (62), Expect = 9.1, Method: Compositional matrix adjust. Identities = 10/31 (32%), Positives = 19/31 (61%) Query: 81 WEECLLASQAVSRGDEPTPMILCGDRLYLNR 111 WE+ +LA++ ++ + P + +C RLY R Sbjct: 58 WEKLILAARVIAAVENPKDVCVCSSRLYGTR 88 >1UAA-A nrPDB Length = 673 Score = 28.5 bits (62), Expect = 9.4, Method: Compositional matrix adjust. Identities = 16/53 (30%), Positives = 26/53 (49%) Query: 168 VISGGPGTGKTTTVAKLLAALIQMADGERCRIRLAAPTGKAAARLTESLGKAL 220 ++ G G+GKT + +A LI+ + I T KAA + E +G+ L Sbjct: 19 LVLAGAGSGKTRVITNKIAHLIRGCGYQARHIAAVTFTNKAAREMKERVGQTL 71 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 5LD2-D nrPDB 1026 0.0 3GP8-A nrPDB 443 e-125 3UPU-A nrPDB 201 9e-52 6EJ5-A nrPDB 119 3e-27 2WJV-A nrPDB 119 3e-27 Sequences not found previously or not previously below threshold: 2XZL-A nrPDB 78 2e-14 5FHF-A nrPDB 69 5e-12 5FHH-A nrPDB 58 2e-08 4B3F-X nrPDB 52 7e-07 5WWP-B nrPDB 49 7e-06 5O6D-A nrPDB 49 8e-06 2IS4-A nrPDB 40 0.003 1C4O-A nrPDB 39 0.005 6ID1-V nrPDB 39 0.006 5XDR-A nrPDB 39 0.006 4XGU-A nrPDB 38 0.012 5IY7-W nrPDB 37 0.022 3DKP-A nrPDB 37 0.028 1YE8-A nrPDB 36 0.065 5VHD-D nrPDB 35 0.10 3B85-A nrPDB 34 0.14 6R7Z-A nrPDB 34 0.16 6CUM-A nrPDB 34 0.17 3HM6-X nrPDB 34 0.18 4XGC-A nrPDB 34 0.22 2PQM-A nrPDB 34 0.24 5GM6-Y nrPDB 34 0.27 3M6A-A nrPDB 34 0.27 4N0N-A nrPDB 33 0.31 1SXJ-D nrPDB 33 0.34 3NXS-A nrPDB 33 0.40 3JVU-A nrPDB 33 0.41 4ZPX-A nrPDB 32 0.50 4NML-A nrPDB 32 0.53 3K1J-A nrPDB 32 0.59 1UAA-A nrPDB 32 0.62 1ION-A nrPDB 32 0.64 2DR3-A nrPDB 32 0.67 5ZME-A nrPDB 32 0.80 4F4J-A nrPDB 32 0.94 5VQ9-D nrPDB 32 0.99 2I3B-A nrPDB 32 1.0 4C0E-A nrPDB 32 1.1 3UMF-A nrPDB 31 1.1 3C8U-A nrPDB 31 1.2 5W0T-A nrPDB 31 1.5 5UJM-A nrPDB 31 1.6 5UJ7-A nrPDB 31 1.6 5N6A-A nrPDB 31 1.7 2CHV-A nrPDB 31 1.8 3LLM-A nrPDB 31 1.9 5FL3-A nrPDB 31 2.0 2P67-A nrPDB 31 2.2 4LJ8-A nrPDB 31 2.4 1HYQ-A nrPDB 30 2.5 1G3Q-A nrPDB 30 2.7 5ZFQ-A nrPDB 30 2.8 5VC7-A nrPDB 30 2.8 3OXN-A nrPDB 30 2.8 5G4G-A nrPDB 30 3.1 5D4W-A nrPDB 30 3.3 6CHS-H nrPDB 30 3.9 1VM8-A nrPDB 30 4.1 3TK1-A nrPDB 30 4.1 3PFI-A nrPDB 29 4.5 5HK8-A nrPDB 29 4.8 3BW4-A nrPDB 29 5.2 1QVR-A nrPDB 29 5.4 4C2U-A nrPDB 29 5.5 2HYI-C nrPDB 29 5.6 2CHG-A nrPDB 29 5.6 4C2T-A nrPDB 29 5.6 5C18-A nrPDB 29 6.7 3HU1-A nrPDB 29 6.7 6MCK-A nrPDB 29 7.1 4I1U-A nrPDB 29 7.5 6MDP-A nrPDB 29 7.7 1D2N-A nrPDB 29 7.7 1XMS-A nrPDB 29 8.8 >5LD2-D nrPDB Length = 609 Score = 1026 bits (2653), Expect = 0.0, Method: Composition-based stats. Identities = 607/607 (100%), Positives = 607/607 (100%) Query: 2 KLQKQLLEAVEHKQLRPLDVQFALTVAGDEHPAVTLAAALLSHDAGEGHVCLPLSRLENN 61 KLQKQLLEAVEHKQLRPLDVQFALTVAGDEHPAVTLAAALLSHDAGEGHVCLPLSRLENN Sbjct: 3 KLQKQLLEAVEHKQLRPLDVQFALTVAGDEHPAVTLAAALLSHDAGEGHVCLPLSRLENN 62 Query: 62 EASHPLLATCVSEIGELQNWEECLLASQAVSRGDEPTPMILCGDRLYLNRMWCNERTVAR 121 EASHPLLATCVSEIGELQNWEECLLASQAVSRGDEPTPMILCGDRLYLNRMWCNERTVAR Sbjct: 63 EASHPLLATCVSEIGELQNWEECLLASQAVSRGDEPTPMILCGDRLYLNRMWCNERTVAR 122 Query: 122 FFNEVNHAIEVDEALLAQTLDKLFPVSDEINWQKVAAAVALTRRISVISGGPGTGKTTTV 181 FFNEVNHAIEVDEALLAQTLDKLFPVSDEINWQKVAAAVALTRRISVISGGPGTGKTTTV Sbjct: 123 FFNEVNHAIEVDEALLAQTLDKLFPVSDEINWQKVAAAVALTRRISVISGGPGTGKTTTV 182 Query: 182 AKLLAALIQMADGERCRIRLAAPTGKAAARLTESLGKALRQLPLTDEQKKRIPEDASTLH 241 AKLLAALIQMADGERCRIRLAAPTGKAAARLTESLGKALRQLPLTDEQKKRIPEDASTLH Sbjct: 183 AKLLAALIQMADGERCRIRLAAPTGKAAARLTESLGKALRQLPLTDEQKKRIPEDASTLH 242 Query: 242 RLLGAQPGSQRLRHHAGNPLHLDVLVVDEASMIDLPMMSRLIDALPDHARVIFLGDRDQL 301 RLLGAQPGSQRLRHHAGNPLHLDVLVVDEASMIDLPMMSRLIDALPDHARVIFLGDRDQL Sbjct: 243 RLLGAQPGSQRLRHHAGNPLHLDVLVVDEASMIDLPMMSRLIDALPDHARVIFLGDRDQL 302 Query: 302 ASVEAGAVLGDICAYANAGFTAERARQLSRLTGTHVPAGTGTEAASLRDSLCLLQKSYRF 361 ASVEAGAVLGDICAYANAGFTAERARQLSRLTGTHVPAGTGTEAASLRDSLCLLQKSYRF Sbjct: 303 ASVEAGAVLGDICAYANAGFTAERARQLSRLTGTHVPAGTGTEAASLRDSLCLLQKSYRF 362 Query: 362 GSDSGIGQLAAAINRGDKTAVKTVFQQDFTDIEKRLLQSGEDYIAMLEEALAGYGRYLDL 421 GSDSGIGQLAAAINRGDKTAVKTVFQQDFTDIEKRLLQSGEDYIAMLEEALAGYGRYLDL Sbjct: 363 GSDSGIGQLAAAINRGDKTAVKTVFQQDFTDIEKRLLQSGEDYIAMLEEALAGYGRYLDL 422 Query: 422 LQARAEPDLIIQAFNEYQLLCALREGPFGVAGLNERIEQFMQQKRKIHRHPHSRWYEGRP 481 LQARAEPDLIIQAFNEYQLLCALREGPFGVAGLNERIEQFMQQKRKIHRHPHSRWYEGRP Sbjct: 423 LQARAEPDLIIQAFNEYQLLCALREGPFGVAGLNERIEQFMQQKRKIHRHPHSRWYEGRP 482 Query: 482 VMIARNDSALGLFNGDIGIALDRGQGTRVWFAMPDGNIKSVQPSRLPEHETTWAMTVHKS 541 VMIARNDSALGLFNGDIGIALDRGQGTRVWFAMPDGNIKSVQPSRLPEHETTWAMTVHKS Sbjct: 483 VMIARNDSALGLFNGDIGIALDRGQGTRVWFAMPDGNIKSVQPSRLPEHETTWAMTVHKS 542 Query: 542 QGSEFDHAALILPSQRTPVVTRELVYTAVTRARRRLSLYADERILSAAIATRTERRSGLA 601 QGSEFDHAALILPSQRTPVVTRELVYTAVTRARRRLSLYADERILSAAIATRTERRSGLA Sbjct: 543 QGSEFDHAALILPSQRTPVVTRELVYTAVTRARRRLSLYADERILSAAIATRTERRSGLA 602 Query: 602 ALFSSRE 608 ALFSSRE Sbjct: 603 ALFSSRE 609 >3GP8-A nrPDB Length = 574 Score = 443 bits (1140), Expect = e-125, Method: Composition-based stats. Identities = 127/434 (29%), Positives = 189/434 (43%), Gaps = 82/434 (18%) Query: 165 RISVISGGPGTGKTTTVAKLLAALIQMADGERCRIRLAAPTGKAAARLTESLGKALRQLP 224 R+ V++GGPGTGK+TT A+ +A+ + L APTGKAA RL E G+ Sbjct: 205 RLVVLTGGPGTGKSTTTK----AVADLAESLGLEVGLCAPTGKAARRLGEVTGRT----- 255 Query: 225 LTDEQKKRIPEDASTLHRLLGAQPGSQRLRHHAGNPLHLDVLVVDEASMIDLPMMSRLID 284 AST+HRLLG P Q RH+ P D+L+VDE SM+ +M L+ Sbjct: 256 ------------ASTVHRLLGYGP--QGFRHNHLEPAPYDLLIVDEVSMMGDALMLSLLA 301 Query: 285 ALPDHARVIFLGDRDQLASVEAGAVLGDICAYANAGFTAERARQLSRLTGTHVPAGTGTE 344 A+P ARV+ +GD DQL V+AG L Sbjct: 302 AVPPGARVLLVGDTDQLPPVDAGLPL---------------------------------L 328 Query: 345 AASLRDSLCLLQKSYRFGSDSGIGQLAAAINRGDKTAVKTVFQQDFTDIEKRLLQSGEDY 404 A + L + YR + + I Q A + G+ A + + T+IE G Sbjct: 329 ALAQAAPTIKLTQVYRQAAKNPIIQAAHGLLHGEAPAWGDK-RLNLTEIEP---DGGARR 384 Query: 405 IAMLEEALAGYGRYLDLLQARAEPDLIIQAFNEYQLLCALREGPFGVAGLNERIEQFMQQ 464 +A++ L G G Q+L +R+GP G+ LN ++ Sbjct: 385 VALMVRELGGPG--------------------AVQVLTPMRKGPLGMDHLNYHLQALFNP 424 Query: 465 KRKIHRHPHSRWYEGRPVMIARNDSALGLFNGDIGIALDRGQGTRVWFAMPDGNIKSVQP 524 R G V+ +ND +FNG +G+ L + +G R+ DGN+ + Sbjct: 425 GEGGVRIAEGEARPGDTVVQTKNDYNNEIFNGTLGMVL-KAEGARLTVDF-DGNVVELTG 482 Query: 525 SRLPEHETTWAMTVHKSQGSEFDHAALILPSQRTPVVTRELVYTAVTRARRRLSLYADER 584 + L + +A+TVH++QGSE+ +L P+++R LVYTA+TRAR R Sbjct: 483 AELFNLQLGYALTVHRAQGSEWGTVLGVLHEAHMPMLSRNLVYTALTRARDRFFSAGSAS 542 Query: 585 ILSAAIATRTERRS 598 A A + E R+ Sbjct: 543 AWQIAAARQREARN 556 >3UPU-A nrPDB Length = 459 Score = 201 bits (510), Expect = 9e-52, Method: Composition-based stats. Identities = 103/479 (21%), Positives = 161/479 (33%), Gaps = 112/479 (23%) Query: 151 INWQKVAAAVALTRRISVISGGPGTGKTTTVAKLLAALIQMADGERCRIRLAAPTGKAAA 210 + V A+ + I+G GTG TT ++ ALI + I LAAPT A Sbjct: 32 NAFNIVMKAIKEKKHHVTINGPAGTGATTLTKFIIEALISTGE---TGIILAAPTHAAKK 88 Query: 211 RLTESLGKALRQLPLTDEQKKRIPEDASTLHRLLGAQPGSQR---LRHHAGNP--LHLDV 265 L++ GK +AST+H +L P + L P V Sbjct: 89 ILSKLSGK-----------------EASTIHSILKINPVTYEENVLFEQKEVPDLAKCRV 131 Query: 266 LVVDEASMIDLPMMSRLIDALPDHARVIFLGDRDQLASVEAGAVLGDICAYANAGFTAER 325 L+ DE SM D + L+ +P +I +GD Q+ V+ G+ AY + FT + Sbjct: 132 LICDEVSMYDRKLFKILLSTIPPWCTIIGIGDNKQIRPVDP----GENTAYISPFFTHKD 187 Query: 326 ARQLSRLTGTHVPAGTGTEAASLRDSLCLLQKSYRFGSDSGIGQLAAAINRGD------- 378 Q C L + R S++ I +A + G Sbjct: 188 FYQ------------------------CELTEVKR--SNAPIIDVATDVRNGKWIYDKVV 221 Query: 379 ----------KTAVKTVFQQDFTDIEKRLLQSGEDYI-AMLEEALAGYGRYLDLLQARAE 427 TA++ F ++ I K L E+ + A +++ + + Sbjct: 222 DGHGVRGFTGDTALRD-FMVNYFSIVKSLDDLFENRVMAFTNKSVDKLNSIIRKKIFETD 280 Query: 428 PDLIIQA--------FNEYQLL-CALREGPFGVAGLNERIEQFMQ---------QKRKIH 469 D I+ F Y++ + E F L IE + Sbjct: 281 KDFIVGEIIVMQEPLFKTYKIDGKPVSEIIFNNGQLVRIIEAEYTSTFVKARGVPGEYLI 340 Query: 470 RHPH-------SRWYEGRPVMIARNDSALGLFNGDIGIALDRGQ-----GTRVWFAMPDG 517 RH Y + I +D L FN +G + + G W D Sbjct: 341 RHWDLTVETYGDDEYYREKIKIISSDEELYKFNLFLGKTAETYKNWNKGGKAPWSDFWDA 400 Query: 518 NIKSVQPSRLPEHETTWAMTVHKSQGSEFDHAALILPSQRTP--VVTRELVYTAVTRAR 574 + + LP A T HK+QG D A + P + ++L+Y VTR R Sbjct: 401 KSQFSKVKALP------ASTFHKAQGMSVDRAFIYTPCIHYADVELAQQLLYVGVTRGR 453 >6EJ5-A nrPDB Length = 637 Score = 119 bits (298), Expect = 3e-27, Method: Composition-based stats. Identities = 38/138 (27%), Positives = 61/138 (44%), Gaps = 12/138 (8%) Query: 131 EVDEALLAQTLDKLFP---VSDEINWQKVAAAVALTRRISVISGGPGTGKTTTVAKLLAA 187 EV++ ++ L K F + D + Q A L R +S+I G PGTGKT T A ++ Sbjct: 172 EVEDVIIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSLIQGPPGTGKTVTSATIVYH 231 Query: 188 LIQMADGERCRIRLAAPTGKAAARLTES---LGKALRQLPLTDEQKKRIPEDASTLH--- 241 L + +G + + AP+ A +LTE G + +L + P LH Sbjct: 232 LARQGNGP---VLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSFLALHNQI 288 Query: 242 RLLGAQPGSQRLRHHAGN 259 R + + P Q+L+ Sbjct: 289 RNMDSMPELQKLQQLKDE 306 >2WJV-A nrPDB Length = 800 Score = 119 bits (298), Expect = 3e-27, Method: Composition-based stats. Identities = 38/138 (27%), Positives = 61/138 (44%), Gaps = 12/138 (8%) Query: 131 EVDEALLAQTLDKLFP---VSDEINWQKVAAAVALTRRISVISGGPGTGKTTTVAKLLAA 187 EV++ ++ L K F + D + Q A L R +S+I G PGTGKT T A ++ Sbjct: 335 EVEDVIIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSLIQGPPGTGKTVTSATIVYH 394 Query: 188 LIQMADGERCRIRLAAPTGKAAARLTES---LGKALRQLPLTDEQKKRIPEDASTLH--- 241 L + +G + + AP+ A +LTE G + +L + P LH Sbjct: 395 LARQGNGP---VLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSFLALHNQI 451 Query: 242 RLLGAQPGSQRLRHHAGN 259 R + + P Q+L+ Sbjct: 452 RNMDSMPELQKLQQLKDE 469 >2XZL-A nrPDB Length = 802 Score = 77.5 bits (189), Expect = 2e-14, Method: Composition-based stats. Identities = 35/124 (28%), Positives = 55/124 (44%), Gaps = 11/124 (8%) Query: 131 EVDEALLAQTLDKLFPVSD---EINWQKVAAAVALTRRISVISGGPGTGKTTTVAKLLAA 187 +V + L K F + + + Q A + L R +S+I G PGTGKT T A ++ Sbjct: 339 QVVDISFDVPLPKEFSIPNFAQLNSSQSNAVSHVLQRPLSLIQGPPGTGKTVTSATIVYH 398 Query: 188 LIQMADGERCRIRLAAPTGKAAARLTESLGKALRQLPLTDEQKKRIPEDAS----TLHRL 243 L ++ + RI + AP+ A L L + L + K R ++S LH L Sbjct: 399 LSKI---HKDRILVCAPSNVAVDHLAAKL-RDLGLKVVRLTAKSREDVESSVSNLALHNL 454 Query: 244 LGAQ 247 +G Sbjct: 455 VGRG 458 >5FHF-A nrPDB Length = 433 Score = 69.1 bits (167), Expect = 5e-12, Method: Composition-based stats. Identities = 93/467 (19%), Positives = 152/467 (32%), Gaps = 99/467 (21%) Query: 154 QKVAAAVALTRRISVISGGPGTGKTTTVAKLLAALIQMADGERCRIRLAAPTGKAAARLT 213 QK+ + ++G G+GKTT + L+ + +AAPTG AA Sbjct: 11 QKIMNLIQDDENNVFVTGKAGSGKTTFLKYLI-------EKSGKNCIVAAPTGIAA---- 59 Query: 214 ESLGKALRQLPLTDEQKKRIPEDASTLHRLLGA--QPGS-QRLRHHA------GNPLHLD 264 I TLH L G P + + L ++ Sbjct: 60 -------------------INAGGVTLHSLFGIPFGPITPYDRLENKFSEYKVELLLKME 100 Query: 265 VLVVDEASM--------IDLPMMSRLIDALP-DHARVIFLGDRDQLASVEAGAVLGDICA 315 +L++DE SM ID + P +V+ GD QL V + Sbjct: 101 LLIIDEISMVRPDILDTIDRKLRWVYESDEPFGGVQVVMFGDLFQLPPVTKKQEREILSD 160 Query: 316 YANAGFTAERARQLSRLTGTHVPAGTGTEAASLRDSLCLLQKSYRFGSDSGIGQLAAAIN 375 + + F + + TG H+ L K +R I + Sbjct: 161 FYDGFFFFNAL--VFKRTGFHI---------------VELTKIFRQTEPEFI-----NVL 198 Query: 376 RGDKTAVKTVFQQD-FTDIEKRLLQSGED--YIAMLEEALAGYGRYLDLL---QARAEPD 429 + T + D ++++ R + S D YI + D L + R Sbjct: 199 NNIRNYQVTSDELDLLSELKDRKISSSYDNEYIHICTHKADVEKINADKLGEQEIRNYDI 258 Query: 430 LIIQAFNEYQLLC----ALREGPFGVAGLNERIEQFMQQKRKIHRHPHSRWYEGRPVMIA 485 +I F E + C LR G ++ +N+ ++ + I V+ Sbjct: 259 VIKDKFPESSIPCDLHLKLRVGARVMSLVNDSLKGYYNGMLGIVTALE------DNVITV 312 Query: 486 RNDSALGLFNGDIGIALDRGQGTRVWFAMPDGNIK--SVQPSRLPEHETTWAMTVHKSQG 543 R D NG I +R + + + D I + WA+T+HKSQG Sbjct: 313 RMD------NGRT-IKFERYTWSNTQYTLKDNEIVKEEIGSCTQFPLTLAWAITIHKSQG 365 Query: 544 SEFDHAALILPSQRTPVVTRELVYTAVTRARRRLSLYADERILSAAI 590 FD I+ T +Y A++R R + +D I I Sbjct: 366 LTFDKI--IIHVSHT--FCPGQLYVALSRCRTLEGIVSDAFITKQMI 408 >5FHH-A nrPDB Length = 442 Score = 57.5 bits (137), Expect = 2e-08, Method: Composition-based stats. Identities = 92/488 (18%), Positives = 152/488 (31%), Gaps = 97/488 (19%) Query: 146 PVSDEINWQKVAAAVALTRRISVISGGPGTGKTTTVAKLLAALIQMADGERCRIRLAAPT 205 Q L + +G GTGK+ + ++L +L A T Sbjct: 4 TKPQLSEEQAAVLRAVLKGQSIFFTGSAGTGKSYLLKRILGSL------PPTGTVATAST 57 Query: 206 GKAAARLTESLGKALRQLPLTDEQKKRIPEDASTLHRLLGAQPGSQRLRHHAGNPLHLDV 265 G AA + G L + + + + R PG ++ L+ Sbjct: 58 GVAACHIG---GTTLHAFAGIGSGQAPLAQCVALAQR-----PGVRQGW------LNCQR 103 Query: 266 LVVDEASMIDLPMMSRLIDALPD---------HARVIFLGDRDQLASVEAGAVLGDICAY 316 LV+DE SM++ + +L ++I GD QL V G+ C Sbjct: 104 LVIDEISMVEADLFDKLEAVARAVRQQNKPFGGIQLIICGDFLQLPPVTKGSQPPRFC-- 161 Query: 317 ANAGFTAERARQLSRLTGTHVPAGTGTEAASLRDSLCLLQKSYRFGSDSGIGQLAAAINR 376 F ++ ++ +T L K +R +D L A+ Sbjct: 162 ----FQSKSWKRCVPVT-------------------LELTKVWRQ-ADQTFISLLQAVRL 197 Query: 377 GDKTAVKTVFQQDFTDIEKRLLQS--------GEDYIAMLEE----ALAGYGRYLDLLQA 424 G + T Q T K +D +A+ E L G + + + Sbjct: 198 GRCSDEVTR-QLQATASHKVGRDGIVATRLCTHQDDVALTNERRLQELPGKVHRFEAMDS 256 Query: 425 RAEPDLIIQAFNEYQLLCALREGPFGVAGLNERIEQFMQQKRKIHRHPHSRWYEGRPVMI 484 E + A L L+ G + N + + + + EGR + Sbjct: 257 NPELASTLDAQCPVSQLLQLKLGAQVMLVKNLSVSRGLVNGARGVVV--GFEAEGRGLPQ 314 Query: 485 ARNDSALGLFNGDIGIALDRGQGTRVWFAMPDGNIKSVQPSRLPEHETTWAMTVHKSQGS 544 R G + R G + S Q +LP + WAM++HKSQG Sbjct: 315 VR------FLCGVTEVI----HADRWTVQATGGQLLSRQ--QLP-LQLAWAMSIHKSQGM 361 Query: 545 EFDHAALILPSQRTPVVTRELVYTAVTRAR----------RRLSLYADERILSAAIATRT 594 D + L V Y A++RAR +++ D R+L R Sbjct: 362 TLDCVEISLGR----VFASGQAYVALSRARSLQGLRVLDFDPMAVRCDPRVLHFYATLRR 417 Query: 595 ERRSGLAA 602 R L + Sbjct: 418 GRSLSLES 425 >4B3F-X nrPDB Length = 646 Score = 52.1 bits (123), Expect = 7e-07, Method: Composition-based stats. Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 5/69 (7%) Query: 150 EINWQKVAAAVAL-TRRISVISGGPGTGKTTTVAKLLAALIQMADGERCRIRLAAPTGKA 208 QK A AL + +++I G PGTGKTTTV +++ ++ ++ AP+ A Sbjct: 190 LDTSQKEAVLFALSQKELAIIHGPPGTGKTTTVVEIILQAVKQG----LKVLCCAPSNIA 245 Query: 209 AARLTESLG 217 L E L Sbjct: 246 VDNLVERLA 254 >5WWP-B nrPDB Length = 600 Score = 48.6 bits (114), Expect = 7e-06, Method: Composition-based stats. Identities = 36/162 (22%), Positives = 58/162 (35%), Gaps = 17/162 (10%) Query: 146 PVSDEINWQKVAAAVALTRRISVISGGPGTGKTTTVAKLLAALIQMADGERCRIRLAAPT 205 V +E + + + G PGTGK+ A+ R+ A + Sbjct: 259 TVPEEFASHVANFQKSGYSKYVTVQGPPGTGKS------HFAIGLAIYYPTARVVYTACS 312 Query: 206 GKAAARLTESLGKALRQLPLTDEQKKRIPEDASTLHRLLGAQPGSQRLRH--HAGNPLHL 263 A L E K L + + + ++ SQ L +A Sbjct: 313 HAAVDALCEKAFKYLNIAKCSRIIPAKARVECYDRFKVNETN--SQYLFSTINALPETSA 370 Query: 264 DVLVVDEASM---IDLPMMSRLIDALPDHARVIFLGDRDQLA 302 D+LVVDE SM DL +++ I A ++++GD QL Sbjct: 371 DILVVDEVSMCTNYDLSIINARIKA----KHIVYVGDPAQLP 408 >5O6D-A nrPDB Length = 545 Score = 48.6 bits (114), Expect = 8e-06, Method: Composition-based stats. Identities = 65/363 (17%), Positives = 125/363 (34%), Gaps = 75/363 (20%) Query: 154 QKVAAAVALTRRISVISGGPGTGKTTTVAKLLAALIQMADGERCRIRLAAPTGKAAARLT 213 Q+ +A +G GTGK+ + +++ L R + + A TG AA + Sbjct: 6 QESIIKLAENGHNIFYTGSAGTGKSILLREMIKVL--KGIYGRENVAVTASTGLAACNIG 63 Query: 214 ESLGKALRQLPLTDEQKKRIPEDASTLHRLLGAQPGSQRLRHHAGNPLHLDVLVVDEASM 273 + + L ++ + +R R H ++ LVVDE SM Sbjct: 64 GITIHSFAGIGLGKGDADKLYKKV-------------RRSRKHLRRWENIGALVVDEISM 110 Query: 274 IDLPMMSRLIDALP----------DHARVIFLGDRDQLASV--EAGAVLGDICAYANAGF 321 +D ++ +L D + ++IF GD QL V + F Sbjct: 111 LDAELLDKL-DFIARKIRKNHQPFGGIQLIFCGDFFQLPPVSKDPNRP-------TKFAF 162 Query: 322 TAERARQLSRLTGTHVPAGTGTEAASLRDSLCLLQKSYRFGSDSGIGQLAAAINRGDKTA 381 ++ ++ ++T +LQK +R D + +NR Sbjct: 163 ESKAWKEGVKMT-------------------IMLQKVFRQRGDVKFIDM---LNRMRLGN 200 Query: 382 VKTVFQQDFTDIEKRLLQSGEDYIAMLEEALAGYGRYLDLLQARAEPDLIIQAFNEYQLL 441 + +++F + + L +E + + RA + + + + Sbjct: 201 IDDETEREFKKLSRPLPD---------DEIIPAELYSTRMEVERANNSRLSKLPGQVHIF 251 Query: 442 CALREGPFGVAGLNER-IEQFMQQKRKIHRHPHSRWYEGRPVMIARNDSALGLFNGDIGI 500 A+ G L ER ++ F+ K + G VM+ +N A L NG +G Sbjct: 252 NAIDGGALEDEELKERLLQNFLAPKELHLKV-------GAQVMMVKNLDAT-LVNGSLGK 303 Query: 501 ALD 503 ++ Sbjct: 304 VIE 306 Score = 29.8 bits (65), Expect = 3.3, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 28/67 (41%), Gaps = 4/67 (5%) Query: 513 AMPDGNIKSVQPSRLPEHETTWAMTVHKSQGSEFDHAALILPSQRTPVVTRELVYTAVTR 572 A+ D N K + W++++HKSQG + L V + Y A++R Sbjct: 444 AIEDENEKPLVSRVQLPLMLAWSLSIHKSQGQTLPKVKVDLRR----VFEKGQAYVALSR 499 Query: 573 ARRRLSL 579 A R L Sbjct: 500 AVSREGL 506 >2IS4-A nrPDB Length = 680 Score = 39.8 bits (91), Expect = 0.003, Method: Composition-based stats. Identities = 73/395 (18%), Positives = 134/395 (33%), Gaps = 88/395 (22%) Query: 141 LDKLFPVSDEINWQKVAAAVALTRRISVISGGPGTGKTTTVAKLLAALIQMADGERCRIR 200 +D + + + Q+ AVA R ++ G G+GKT + +A L+ + + I Sbjct: 1 MDVSYLLDSLNDKQR--EAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIM 58 Query: 201 LAAPTGKAAARLTESLGKALRQLPLTDEQKKRIPEDASTLHRLLGAQPGSQRLRHHAGNP 260 T KAAA + +G QL T + + HRLL A HH Sbjct: 59 AVTFTNKAAAEMRHRIG----QLMGTSQGGMWVGTFHGLAHRLLRA--------HHMDAN 106 Query: 261 LHLDVLVVDEASMIDLPMMSRLIDAL-------PDHARVIFLGDRDQLASVEAGAVLGDI 313 L D ++D S L ++ RLI A+ P + ++ + + G I Sbjct: 107 LPQDFQILD--SEDQLRLLKRLIKAMNLDEKQWPPRQAMWYINSQK-----DEGLRPHHI 159 Query: 314 CAYANAGFTAERARQLSRLTGTHVPAGTGTEAASLRDSLCLLQKSYRFGSD-SGIGQLAA 372 +Y N E+ Q + ++Y+ D +G+ A Sbjct: 160 QSYGNP---VEQTWQ-------------------------KVYQAYQEACDRAGLVDFAE 191 Query: 373 AINRG-----DKTAVKTVFQQDFTDIEKRLLQSGEDYIAMLEEALAGYGRYLDLLQARAE 427 + R +K + +++ FT+I Q + LAG + + Sbjct: 192 LLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAG---DTGKVMIVGD 248 Query: 428 PDLIIQAFNEYQLLCALREGPFGVAGLNERIEQFMQQKRKIHRHPHSRWYEGRPVMIARN 487 D I + Q+ E I++F+ + Y +++ Sbjct: 249 DDQSIYGWRGAQV---------------ENIQRFLNDFPGAETIRLEQNYRSTSNILSAA 293 Query: 488 DSALGLFNGDIGIALDRGQGTRVWFAMPDGNIKSV 522 ++ + NG + G ++W DG S+ Sbjct: 294 NALIENNNGRL--------GKKLWTDGADGEPISL 320 >1C4O-A nrPDB Length = 664 Score = 39.4 bits (90), Expect = 0.005, Method: Composition-based stats. Identities = 32/119 (26%), Positives = 47/119 (39%), Gaps = 3/119 (2%) Query: 159 AVALTRRISVISGGPGTGKTTTVAKLLAALIQMADGERCRIRLAAPTGKAAARL-TESLG 217 A+ R + G GTGKT T+AK++ AL + A LAA L E+ Sbjct: 23 ALRDGERFVTLLGATGTGKTVTMAKVIEALGRPALVLAPNKILAAQLAAEFRELFPENAV 82 Query: 218 KALRQLPLTDEQKKRIPEDASTLHRLLGAQPGSQRLRHHAGNPL--HLDVLVVDEASMI 274 + + + +P + + P +RLRH L DV+VV S I Sbjct: 83 EYFISYYDYYQPEAYVPGKDLYIEKDASINPEIERLRHSTTRSLLTRRDVIVVASVSAI 141 >6ID1-V nrPDB Length = 795 Score = 39.0 bits (89), Expect = 0.006, Method: Composition-based stats. Identities = 24/133 (18%), Positives = 49/133 (36%), Gaps = 3/133 (2%) Query: 141 LDKLFPVSDEINWQKVAAAVALTRRISVISGGPGTGKTTTVAKLLAALIQMADGERCRIR 200 L K + + + + ++ G G+GKTT + + ++ G + + Sbjct: 131 LKKRLQLPVWEYKDRFTDILVRHQSFVLV-GETGSGKTTQIPQWCVEYMRSLPGPKRGVA 189 Query: 201 LAAPTGKAAARLTESLGKALRQLPLTDEQKKRIPEDASTLHRLLGAQPGSQRLRHHAGNP 260 P AA + + + + + + ED S+ +L LR +P Sbjct: 190 CTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDP 249 Query: 261 L--HLDVLVVDEA 271 L V+++DEA Sbjct: 250 LLERYGVIILDEA 262 >5XDR-A nrPDB Length = 690 Score = 39.0 bits (89), Expect = 0.006, Method: Composition-based stats. Identities = 24/133 (18%), Positives = 49/133 (36%), Gaps = 3/133 (2%) Query: 141 LDKLFPVSDEINWQKVAAAVALTRRISVISGGPGTGKTTTVAKLLAALIQMADGERCRIR 200 L K + + + + ++ G G+GKTT + + ++ G + + Sbjct: 26 LKKRLQLPVWEYKDRFTDILVRHQSFVLV-GETGSGKTTQIPQWCVEYMRSLPGPKRGVA 84 Query: 201 LAAPTGKAAARLTESLGKALRQLPLTDEQKKRIPEDASTLHRLLGAQPGSQRLRHHAGNP 260 P AA + + + + + + ED S+ +L LR +P Sbjct: 85 CTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDP 144 Query: 261 L--HLDVLVVDEA 271 L V+++DEA Sbjct: 145 LLERYGVIILDEA 157 >4XGU-A nrPDB Length = 424 Score = 38.2 bits (87), Expect = 0.012, Method: Composition-based stats. Identities = 17/69 (24%), Positives = 32/69 (46%), Gaps = 1/69 (1%) Query: 156 VAAAVALTRRISVISGGPGTGKTTTVAKLLAAL-IQMADGERCRIRLAAPTGKAAARLTE 214 V + R+ +++G PGTGKT+ L L I+M D + L + ++ Sbjct: 164 VNTKIINVNRLILLTGPPGTGKTSLCKGLAQHLSIRMNDKYSKSVMLEINSHSLFSKWFS 223 Query: 215 SLGKALRQL 223 GK ++++ Sbjct: 224 ESGKLVQKM 232 >5IY7-W nrPDB Length = 760 Score = 37.1 bits (84), Expect = 0.022, Method: Composition-based stats. Identities = 21/126 (16%), Positives = 42/126 (33%) Query: 141 LDKLFPVSDEINWQKVAAAVALTRRISVISGGPGTGKTTTVAKLLAALIQMADGERCRIR 200 + ++ ++ + + V+ GTGKT ++ L+ A + E ++ Sbjct: 12 FPYDYIYPEQFSYMRELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAYQRAYPLEVTKLI 71 Query: 201 LAAPTGKAAARLTESLGKALRQLPLTDEQKKRIPEDASTLHRLLGAQPGSQRLRHHAGNP 260 + T ++ E L K L + +K A + + L P LR Sbjct: 72 YCSRTVPEIEKVIEELRKLLNFYEKQEGEKLPFLGLALSSRKNLCIHPEVTPLRFGKDVD 131 Query: 261 LHLDVL 266 L Sbjct: 132 GKCHSL 137 >3DKP-A nrPDB Length = 245 Score = 36.7 bits (83), Expect = 0.028, Method: Composition-based stats. Identities = 33/159 (20%), Positives = 61/159 (38%), Gaps = 13/159 (8%) Query: 123 FNEVNHAIEVDEALLAQTLDKLFPVSDEINWQKVAAAVALTRRISVISGGPGTGKTTTVA 182 F +++ +++ LL LD F + I Q A V L R + S G+GKT + Sbjct: 27 FQQLDQEYKINSRLLQNILDAGFQMPTPIQMQ--AIPVMLHGRELLASAPTGSGKTLAFS 84 Query: 183 KLLAALIQMADGERCRIRLAAPTGKAAAR-------LTESLGKALRQLPLTDEQKKRIPE 235 + ++ + R + +PT + A++ ++E G + + K+ Sbjct: 85 IPILMQLKQPANKGFRALIISPTRELASQIHRELIKISEGTGFRIHMIHKAAVAAKKFGP 144 Query: 236 DASTLHRLLGAQPGSQRLRHHAGNP----LHLDVLVVDE 270 +S +L P P ++ LVVDE Sbjct: 145 KSSKKFDILVTTPNRLIYLLKQDPPGIDLASVEWLVVDE 183 >1YE8-A nrPDB Length = 178 Score = 35.6 bits (80), Expect = 0.065, Method: Composition-based stats. Identities = 26/121 (21%), Positives = 48/121 (39%), Gaps = 21/121 (17%) Query: 167 SVISGGPGTGKTTTVAKLLAALIQMADGERCRIRLAAPTGKAAARLTESLGKALRQLPLT 226 +I+G PG GKTT V K++ L + A G R E+ + ++ T Sbjct: 3 IIITGEPGVGKTTLVKKIVERLGKRAIGFWTEEV----------RDPETKKRTGFRIITT 52 Query: 227 DEQKKRIPEDASTLHRLLGAQPGSQRLRHHAGNPL-----------HLDVLVVDEASMID 275 + +KK T +L+G+ + + P+ V+++DE ++ Sbjct: 53 EGKKKIFSSKFFTSKKLVGSYGVNVQYFEELAIPILERAYREAKKDRRKVIIIDEIGKME 112 Query: 276 L 276 L Sbjct: 113 L 113 >5VHD-D nrPDB Length = 870 Score = 34.8 bits (78), Expect = 0.10, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 29/65 (44%), Gaps = 1/65 (1%) Query: 154 QKVAAAVALTRRISVISGGPGTGKTT-TVAKLLAALIQMADGERCRIRLAAPTGKAAARL 212 QK + +++VISG G GKTT +L I+ G CRI P +A + Sbjct: 66 QKELVNMIDNHQVTVISGETGCGKTTQVTQFILDNYIERGKGSACRIVCTQPRRISAISV 125 Query: 213 TESLG 217 E + Sbjct: 126 AERVA 130 >3B85-A nrPDB Length = 208 Score = 34.4 bits (77), Expect = 0.14, Method: Composition-based stats. Identities = 31/152 (20%), Positives = 55/152 (36%), Gaps = 6/152 (3%) Query: 154 QKVAAAVALTRRISVISGGPGTGKTTTVAKLLAALIQMADGERCRIRLAAPTGKAAARLT 213 QK T I G G+GKT + A+ + + RI L P +A +L Sbjct: 12 QKHYVDAIDTNTIVFGLGPAGSGKTYLA--MAKAVQALQSKQVSRIILTRPAVEAGEKLG 69 Query: 214 ESLG---KALRQLPLTDEQKKRIPEDASTLHRLLGAQPGSQR-LRHHAGNPLHLDVLVVD 269 G + + R + + +L+ A L + G L+ +++D Sbjct: 70 FLPGTLNEKIDPYLRPLHDALRDMVEPEVIPKLMEAGIVEVAPLAYMRGRTLNDAFVILD 129 Query: 270 EASMIDLPMMSRLIDALPDHARVIFLGDRDQL 301 EA M + L ++++ GD Q+ Sbjct: 130 EAQNTTPAQMKMFLTRLGFGSKMVVTGDITQV 161 >6R7Z-A nrPDB Length = 667 Score = 34.4 bits (77), Expect = 0.16, Method: Composition-based stats. Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 9/54 (16%) Query: 534 WAMTVHKSQGSEFDHAALILPSQRTPVVTRELVYTAVTRARRRLSLYADERILS 587 WA+ +H++ GSE+ L +PS ++Y V RL YA E + S Sbjct: 342 WALGLHENSGSEWTSVLLYVPS---------IIYAIVIEIMNRLYRYAAEFLTS 386 >6CUM-A nrPDB Length = 315 Score = 34.0 bits (76), Expect = 0.17, Method: Composition-based stats. Identities = 53/275 (19%), Positives = 90/275 (32%), Gaps = 34/275 (12%) Query: 154 QKVAAAVALTRRISVISGGPGTGKTTTVAKLLAALIQMADGERCRIRLAAPTGKAAARLT 213 + +AA T R+ ++G PG GK+TTV ++ A + R + P+ + Sbjct: 58 EVLAALGPATPRVIGVTGPPGAGKSTTVGAMVGAYRERG--LRVAVLAVDPSSPYSG--G 113 Query: 214 ESLGKALRQLPLTDEQKKRIPEDASTLH--RLLGAQPGSQRLRHHAGNPLHLDVLVVDEA 271 LG +R ++ I A+ H L A P + RL L D++V++ Sbjct: 114 ALLGDRIRMAAHINDPDVLIRSMAARGHLGGLAAAVPAAIRL----LAALSYDLIVLETV 169 Query: 272 SMIDLPMMSRLIDALPDHARVIFLGDRDQLASVEAGAVLGDICAYANAGFTAERARQLSR 331 + + I ++ G D + + +AG + N + A Q R Sbjct: 170 GVGQSEIEIAAIA--DPTVVILNPGAGDAVQAAKAGVLEVADLVVVNKA-DRDGADQTVR 226 Query: 332 LTGTHVPAGTGTEAASLRDSLCLLQKSY------------RFGSDSGIGQLAAAINRGDK 379 A+ D L L ++ R + S I LA + R Sbjct: 227 DLRAETDVPVLKLVAAQGDGLHELIEAIEAHQRADTPERRRARARSQILSLAQTLLRNHA 286 Query: 380 TAVKTVFQQDFTDIEKRLLQSGEDYIAMLEEALAG 414 D + + D E AG Sbjct: 287 ---------DLDRLSAAVADGSSDAYTAAERLFAG 312 >3HM6-X nrPDB Length = 644 Score = 34.0 bits (76), Expect = 0.18, Method: Composition-based stats. Identities = 52/255 (20%), Positives = 82/255 (32%), Gaps = 25/255 (9%) Query: 215 SLGKALRQLPLTDEQKKRIPEDASTLHRLLGAQPGSQRLRHHAGNPLHLDVLVVDEASMI 274 GKA L ++ + TL+ LL PG+ G P+ VL D S Sbjct: 235 VTGKAKYTLNDNRLLREDVEYRPLTLNALLAVGPGAG---EAQGVPVK--VLDCDTISQA 289 Query: 275 DLPMMSRLIDALP----DHARVIFLGDRDQLASVEAGAVLGDICAYANAGFTAERARQLS 330 M+ +L +P R + D + + V +L D + R+L+ Sbjct: 290 KEKMLDQLYKGVPLTQRPDPRTL---DVEWRSGVAGHLILSDEDVTSE---VQGLWRRLN 343 Query: 331 RLTGTHVPAG-TGTEAASLRDSLCLLQKSYRFGSDSGIGQLAAAINRGDKTAVKTVFQQD 389 L VP G T L + + Y G + + + ++ G V D Sbjct: 344 TLQHYKVPDGATVALVPCLTKHVLRENQDYVPGERTPMLE---DVDEGGIRPWHLVKPSD 400 Query: 390 FTDIEKRLLQSGEDYIAMLEEALAGYGRYLDLLQARAEPDLIIQAFNEYQLLCALREGPF 449 + E + G E A A YL L + +L R P Sbjct: 401 --EPEPPRPRRGSLRGGERERAKAIPEIYLTRLLSMKGTLQKFVDDLFQVILSTSRPVPL 458 Query: 450 GV----AGLNERIEQ 460 V L+E+ +Q Sbjct: 459 AVKYFFDLLDEQAQQ 473 >4XGC-A nrPDB Length = 393 Score = 33.6 bits (75), Expect = 0.22, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 29/78 (37%), Gaps = 9/78 (11%) Query: 169 ISGGPGTGKTTTVAKLLAALIQMADGERC---------RIRLAAPTGKAAARLTESLGKA 219 +SG PGTGKT TV ++ L +MA +RL P + GK Sbjct: 65 VSGVPGTGKTATVTGVIRTLQRMAKQNELPAFEYLEINGMRLTEPRQAYVQIYKQLTGKT 124 Query: 220 LRQLPLTDEQKKRIPEDA 237 + +KR A Sbjct: 125 VSWEQAHALLEKRFTTPA 142 >2PQM-A nrPDB Length = 343 Score = 33.6 bits (75), Expect = 0.24, Method: Composition-based stats. Identities = 19/82 (23%), Positives = 35/82 (42%), Gaps = 2/82 (2%) Query: 179 TTVAKLLAALIQMADGERCRIRLAAPTGKAAARLTESLGKALRQLPLTDEQKKRIPEDAS 238 +T AL Q R+ +A P+ + R + + KA + E KK +P Sbjct: 84 STSGNTGIALCQAGAVFGYRVNIAMPSTMSVER--QMIMKAFGAELILTEGKKGMPGAIE 141 Query: 239 TLHRLLGAQPGSQRLRHHAGNP 260 +++++ PG + + GNP Sbjct: 142 EVNKMIKENPGKYFVANQFGNP 163 >5GM6-Y nrPDB Length = 876 Score = 33.6 bits (75), Expect = 0.27, Method: Composition-based stats. Identities = 54/260 (20%), Positives = 99/260 (38%), Gaps = 30/260 (11%) Query: 60 NNEASHPLL-ATCVSEIGELQNWEECLLASQAVSRGDEPTPMILCGDRLY-----LNRM- 112 N E +H + A + +I + WEE L + + D P + L G Y + M Sbjct: 122 NVEVTHKIKNAKEIDKINRQRMWEEQQLRNAMAGQSDHPDDITLEGSDKYDYVFDTDAMI 181 Query: 113 -WCNE------RTVARFFNEVNHAIEVDE--ALLAQTLDKLFPVSDEINWQKVAAAVALT 163 + NE ++ + A+E +E L Q KL PV ++ Sbjct: 182 DYTNEEDDLLPEEKLQYEARLAQALETEEKRILTIQEARKLLPV---HQYKDELLQEIKK 238 Query: 164 RRISVISGGPGTGKTTTVAKLLAALIQMA--DGERCRIRLAAPTGKAAARLTESLGKALR 221 ++ +I G G+GKTT +L L++ D + +I + P AA + + + Sbjct: 239 NQVLIIMGETGSGKTT---QLPQYLVEDGFTDQGKLQIAITQPRRVAATSVAARVADEMN 295 Query: 222 QLPLTDEQKKRIPEDASTLHR-LLGAQPGSQRLRH--HAGNPLHLDVLVVDEA---SMID 275 + + + ED +T ++ +L LR +++DEA ++ Sbjct: 296 VVLGKEVGYQIRFEDKTTPNKTVLKYMTDGMLLREFLTDSKLSKYSCIMIDEAHERTLAT 355 Query: 276 LPMMSRLIDALPDHARVIFL 295 ++ L D LP + L Sbjct: 356 DILIGLLKDILPQRPTLKLL 375 >3M6A-A nrPDB Length = 543 Score = 33.6 bits (75), Expect = 0.27, Method: Composition-based stats. Identities = 54/297 (18%), Positives = 97/297 (32%), Gaps = 35/297 (11%) Query: 117 RTVARFFNEVNHAIE-VDEALLAQTLDKLFPVSDEINWQKVAAAVALTRRISVISGGPGT 175 + R +E +H +E V E +L + S L I ++G PG Sbjct: 73 KEAGRLLDEEHHGLEKVKERILEYLAVQKLTKS-------------LKGPILCLAGPPGV 119 Query: 176 GKTTTVAKLLAALIQMADGERCRIRLAAPTGKAAARLTESLGKALRQLPLTDEQKKRIPE 235 GKT+ + +L + +E G + + + + Sbjct: 120 GKTSLAKSIAKSLGRKFVRISLG---------GVRDESEIRGHRRTYVGAMPGRIIQGMK 170 Query: 236 DASTLHRLLGAQPGSQRLRHHAGNP--LHLDVLVVDEASMIDLPMMSRLIDALPDHARVI 293 A L+ + + G+P L+VL ++ S + D ++V+ Sbjct: 171 KAGKLNPVFLLDEIDKMSSDFRGDPSSAMLEVLDPEQNSSFSDHYIEETFDL----SKVL 226 Query: 294 FLGDRDQLASVEAGAVLGDICAYANAGFTAERARQLSR---LTGTHVPAGTGTEAASLRD 350 F+ + LA++ G + + AG+T ++ + L G LRD Sbjct: 227 FIATANNLATI-PGPLRDRMEIINIAGYTEIEKLEIVKDHLLPKQIKEHGLKKSNLQLRD 285 Query: 351 SLCLLQKSY--RFGSDSGIGQLAAAINRGDKTAVKTVFQQDFTDIEKRLLQSGEDYI 405 L Y R + + AAI R A+ ++ T EK L I Sbjct: 286 QAILDIIRYYTREAGVRSLERQLAAICRKAAKAIVAEERKRITVTEKNLQDFIGKRI 342 >4N0N-A nrPDB Length = 423 Score = 33.2 bits (74), Expect = 0.31, Method: Composition-based stats. Identities = 33/168 (19%), Positives = 55/168 (32%), Gaps = 28/168 (16%) Query: 146 PVSDEINWQKVAAAVALTRRISVISGGPGTGKTTTVAKLLAALIQMADGERCRIRLAAPT 205 P+ D + V A+ + G PG+GKT + K + A++ A L PT Sbjct: 154 PLQDTLKGVVVNKALKNAAASEYVEGPPGSGKTFHLVKDVLAVVGSAT-------LVVPT 206 Query: 206 GKA----AARLTESLGKALRQLPLTDEQKKRIPEDASTLHRLLGAQPGSQRLRHHAGNPL 261 + +L ++ +P P + RL Sbjct: 207 HASMLDCINKLKQAGADPYFVVPKYTVLDFPRPGSGNITVRLPQVGTSEGETF------- 259 Query: 262 HLDVLVVDEASMIDLPMMSRLIDALPDHARVIFLGDRDQLASVEAGAV 309 VDE + ++R++ RV GD +QL V +V Sbjct: 260 ------VDEVAYFSPVDLARILTQ----GRVKGYGDLNQLGCVGPASV 297 >1SXJ-D nrPDB Length = 353 Score = 33.2 bits (74), Expect = 0.34, Method: Composition-based stats. Identities = 31/136 (22%), Positives = 48/136 (35%), Gaps = 30/136 (22%) Query: 149 DEINWQKVAAAVALTR------RISVISGGPGTGKTTTVAKLLAALIQMADGERCRIRLA 202 DE+ Q A V + G PGTGKT+T + AL + G Sbjct: 37 DEVTAQDHAVTVLKKTLKSANLPHMLFYGPPGTGKTST----ILALTKELYGPDL----- 87 Query: 203 APTGKAAARLTESLGKALRQLPLTDEQKKRIPEDASTLHRLLGAQPGSQRLRHHAGNPLH 262 +R+ E R + + E+ K RL ++P L + P Sbjct: 88 -----MKSRILELNASDERGISIVREKVKNFA-------RLTVSKPSKHDL-ENYPCP-P 133 Query: 263 LDVLVVDEA-SMIDLP 277 ++++DEA SM Sbjct: 134 YKIIILDEADSMTADA 149 >3NXS-A nrPDB Length = 329 Score = 32.9 bits (73), Expect = 0.40, Method: Composition-based stats. Identities = 42/198 (21%), Positives = 70/198 (35%), Gaps = 27/198 (13%) Query: 166 ISVISGGPGTGKTTTVAKLLAALIQMADGERCRIRLAAPTGKAAARLTESLGKALRQLPL 225 I+G PG GK+TT+ L LI+ + T + L + + +L + Sbjct: 59 HVGITGVPGVGKSTTIEALGMHLIEAGHRVAVLAVDPSSTRTGGSILGDKT--RMARLAV 116 Query: 226 TDEQKKRIPEDASTLHRLLGAQPGSQRLRHHAGNPLHLDVLVVDEA----------SMID 275 + R + TL + A + L AG DV++V+ M+D Sbjct: 117 HPDAYIRPSPTSGTLGGVAKATRETIVLLEAAG----YDVILVETVGVGQSEVTVAGMVD 172 Query: 276 LPMMSRLIDA----------LPDHARVIFLGDRDQLASVEAGAVLGDICAYANAGFTAER 325 + L + + A VI + D +VEA A ++ + E Sbjct: 173 TFVFLTLARTGDQLQGIKKGVLELADVIVVNKADGEHAVEAKAAARELSGAIRLIYPRES 232 Query: 326 ARQLSRLTGTHVPAGTGT 343 + LT + V GTG Sbjct: 233 LWRPPVLTMSAV-EGTGL 249 >3JVU-A nrPDB Length = 356 Score = 32.9 bits (73), Expect = 0.41, Method: Composition-based stats. Identities = 19/74 (25%), Positives = 34/74 (45%), Gaps = 8/74 (10%) Query: 119 VARF----FNEVNHAIEVDEALLAQTLDKLFPVSDEINWQKVAAAVALTRRISVISGGPG 174 VARF FN+ A A+ K+ + + + + R + +++G G Sbjct: 78 VARFRVNAFNQNRGA----GAVFRTIPSKVLTMEELGMGEVFKRVSDVPRGLVLVTGPTG 133 Query: 175 TGKTTTVAKLLAAL 188 +GK+TT+A +L L Sbjct: 134 SGKSTTLAAMLDYL 147 >4ZPX-A nrPDB Length = 413 Score = 32.5 bits (72), Expect = 0.50, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 26/59 (44%), Gaps = 7/59 (11%) Query: 130 IEVDEALLAQTLDKLFPVSDEINWQKVAAAVALTRRISVISGGPGTGKTTTVAKLLAAL 188 IEV E L+ Q + + + +V A +R ++ G PGTGK+ + L Sbjct: 33 IEVPEKLIDQVIGQE-------HAVEVIKTAANQKRHVLLIGEPGTGKSMLGQAMAELL 84 >4NML-A nrPDB Length = 275 Score = 32.5 bits (72), Expect = 0.53, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 25/67 (37%) Query: 174 GTGKTTTVAKLLAALIQMADGERCRIRLAAPTGKAAARLTESLGKALRQLPLTDEQKKRI 233 G G TT ++ + Q + L PT +A + ESLG L L + Sbjct: 27 GLGTGTTAKFVVERIGQRMQEGSLKDLLCVPTSEATRKQAESLGIPLTTLDGIADCLDVA 86 Query: 234 PEDASTL 240 + A + Sbjct: 87 IDGADEI 93 >3K1J-A nrPDB Length = 604 Score = 32.5 bits (72), Expect = 0.59, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 26/59 (44%), Gaps = 7/59 (11%) Query: 130 IEVDEALLAQTLDKLFPVSDEINWQKVAAAVALTRRISVISGGPGTGKTTTVAKLLAAL 188 IEV E L+ Q + + + +V A +R ++ G PGTGK+ + L Sbjct: 33 IEVPEKLIDQVIGQE-------HAVEVIKTAANQKRHVLLIGEPGTGKSMLGQAMAELL 84 >1UAA-A nrPDB Length = 673 Score = 32.5 bits (72), Expect = 0.62, Method: Composition-based stats. Identities = 21/76 (27%), Positives = 33/76 (43%), Gaps = 7/76 (9%) Query: 168 VISGGPGTGKTTTVAKLLAALIQMADGERCRIRLAAPTGKAAARLTESLGKALRQLPLTD 227 ++ G G+GKT + +A LI+ + I T KAA + E +G+ L Sbjct: 19 LVLAGAGSGKTRVITNKIAHLIRGCGYQARHIAAVTFTNKAAREMKERVGQTL------- 71 Query: 228 EQKKRIPEDASTLHRL 243 +K+ ST H L Sbjct: 72 GRKEARGLMISTFHTL 87 >1ION-A nrPDB Length = 243 Score = 32.1 bits (71), Expect = 0.64, Method: Composition-based stats. Identities = 17/31 (54%), Positives = 21/31 (67%) Query: 162 LTRRISVISGGPGTGKTTTVAKLLAALIQMA 192 +TR IS++SG GTGKTT A L AL +M Sbjct: 1 MTRIISIVSGKGGTGKTTVTANLSVALGEMG 31 >2DR3-A nrPDB Length = 247 Score = 32.1 bits (71), Expect = 0.67, Method: Composition-based stats. Identities = 12/31 (38%), Positives = 19/31 (61%) Query: 163 TRRISVISGGPGTGKTTTVAKLLAALIQMAD 193 R + ++SGGPGTGKT + L ++M + Sbjct: 22 ERNVVLLSGGPGTGKTIFSQQFLWNGLKMGE 52 >5ZME-A nrPDB Length = 687 Score = 32.1 bits (71), Expect = 0.80, Method: Composition-based stats. Identities = 38/193 (19%), Positives = 56/193 (29%), Gaps = 14/193 (7%) Query: 159 AVALTRRISVISGGPGTGKTTTVAKLLAALIQMADGERCRIRLAAPTGKAAARLTE-SLG 217 A R+ +ISG G GKT+ A L L A G + P + L + G Sbjct: 7 AAGQQRKYIMISGKGGVGKTSLSASLAVKLA--AAGHTTLVVSTDPAHSLSDSLAQDVSG 64 Query: 218 KALRQLPLTDEQKKRIPEDASTLHRLLGAQPGSQRLRHHAGNPLHLDVLVVDEASMIDLP 277 L TD + D R +G + AS + Sbjct: 65 GRPVLLQGTDLPLWGLEIDPEEAKR---------EFFEGSGAGQDGEAGGPSAASQVSDF 115 Query: 278 MMSRLIDALPDHARVIFLGDRDQLASVEAGAVLGDICAYANAGFTAERARQLSRLTGTHV 337 M + + D + + LG+ G A A + SR+ Sbjct: 116 MNRMGMGFVIDQLKELKLGELLNTPP--PGLDEAVAIAKVVQFVQAAEYARFSRIVFDTA 173 Query: 338 PAGTGTEAASLRD 350 P G +L D Sbjct: 174 PTGHTLRLLALPD 186 >4F4J-A nrPDB Length = 202 Score = 31.7 bits (70), Expect = 0.94, Method: Composition-based stats. Identities = 18/54 (33%), Positives = 22/54 (40%), Gaps = 7/54 (12%) Query: 165 RISVISGGPGTGKTTTVAKLLAALIQMADGERCRIRLAAPTGKAAARLTESLGK 218 R VISG GTGK+T + KL A + P+ R E GK Sbjct: 18 RPIVISGPSGTGKSTLLKKLFAEYPD-------SFGFSVPSTTRTPRAGEVNGK 64 >5VQ9-D nrPDB Length = 432 Score = 31.7 bits (70), Expect = 0.99, Method: Composition-based stats. Identities = 14/60 (23%), Positives = 28/60 (46%), Gaps = 1/60 (1%) Query: 165 RISVISGGPGTGKTTTVAKLLAAL-IQMADGERCRIRLAAPTGKAAARLTESLGKALRQL 223 R+ ++ G PGTGKT+ L L I+++ R + + ++ GK + ++ Sbjct: 173 RVVLLHGPPGTGKTSLCKALAQKLTIRLSSRYRYGQLIEINSHSLFSKWFSESGKLVTKM 232 >2I3B-A nrPDB Length = 189 Score = 31.7 bits (70), Expect = 1.0, Method: Composition-based stats. Identities = 10/28 (35%), Positives = 13/28 (46%) Query: 165 RISVISGGPGTGKTTTVAKLLAALIQMA 192 R ++G PG GKTT + K L Sbjct: 2 RHVFLTGPPGVGKTTLIHKASEVLKSSG 29 >4C0E-A nrPDB Length = 528 Score = 31.7 bits (70), Expect = 1.1, Method: Composition-based stats. Identities = 30/189 (15%), Positives = 54/189 (28%), Gaps = 26/189 (13%) Query: 197 CRIRLAAPTGKAAARLTESLGKALRQLPLTDEQKKRIPEDASTLHRLLGAQPGSQRLRHH 256 + L P K A T+ L + L + + H L Q Sbjct: 205 LPVILGLPDEKGWAPFTKLLEQFLGCVGELVKTFTVSSLGKEMYHAALKILIVLQHDFPI 264 Query: 257 AGNPLHLDVLVVDEASMIDLPMMSRLIDALPDHARVIFLGDRDQLASVEAGAVLGDICAY 316 + V + + +++ ++ A+P + +AG + I Sbjct: 265 YLD--KFRVQLCQSLPLHATQLVNLILAAIPPNC-------NSLADPFQAGLKVDKIPDM 315 Query: 317 ANAGFTAERARQLSRLTGTHVPAGTGTEAASLRDSLCLLQKSYRFGSDSGIGQLAAAINR 376 TA + L R G E S+ G+ Q+ AIN+ Sbjct: 316 KERPPTAFDSAGLLREAGLL----DILERMLQNGP-----------SEDGVAQINHAINK 360 Query: 377 --GDKTAVK 383 G+ T+ Sbjct: 361 SDGESTSFG 369 >3UMF-A nrPDB Length = 217 Score = 31.3 bits (69), Expect = 1.1, Method: Composition-based stats. Identities = 30/136 (22%), Positives = 51/136 (37%), Gaps = 14/136 (10%) Query: 154 QKVAAAVALTRRISVISGGPGTGKTTTVAKLLAAL----IQMADGERCRIRLAAPTGKAA 209 QK+A A ++ + GGPG+GK T KL+ + D R ++ +P GK Sbjct: 24 QKLAKA-----KVIFVLGGPGSGKGTQCEKLVQKFHFNHLSSGDLLRAEVQSGSPKGKEL 78 Query: 210 ARLTESLGKALRQLPLTDEQKKRIPEDASTLHRLLGAQP--GSQRLRHHAGNPLHLDVLV 267 + E ++ L ++ I H L+ P Q ++ L Sbjct: 79 KAMMERGELVPLEVVLALLKEAMIKLVDKNCHFLIDGYPRELDQGIKFEKEV---CPCLC 135 Query: 268 VDEASMIDLPMMSRLI 283 V + + M RL+ Sbjct: 136 VINFDVSEEVMRKRLL 151 >3C8U-A nrPDB Length = 208 Score = 31.3 bits (69), Expect = 1.2, Method: Composition-based stats. Identities = 12/29 (41%), Positives = 17/29 (58%) Query: 164 RRISVISGGPGTGKTTTVAKLLAALIQMA 192 R++ +SG PG+GK+T L AAL Sbjct: 22 RQLVALSGAPGSGKSTLSNPLAAALSAQG 50 >5W0T-A nrPDB Length = 304 Score = 30.9 bits (68), Expect = 1.5, Method: Composition-based stats. Identities = 26/160 (16%), Positives = 51/160 (31%), Gaps = 40/160 (25%) Query: 154 QKVAAAVALTRRI-SVISGGPGTGKTTTVAKLLAALIQMADGERCRIRLAA-------PT 205 + + + L ++ G PG GKT AL + + IR+++ + Sbjct: 66 EVYSNSPLLQAPSGVLLYGPPGCGKTMLAK----ALAKESGANFISIRMSSIMDKWYGES 121 Query: 206 GKAAARLTESLGKALRQLPLTDEQKKRIPEDASTLHRLLGAQPGSQRLRHHAGNPLHLDV 265 K + K + DE + E +ST H Sbjct: 122 NKIVDAMFSLANKLQPCIIFIDEIDSFLRERSSTDH------------------------ 157 Query: 266 LVVDEASMIDLPMMSRLIDALPDHARVIFLGDRDQLASVE 305 E + L D L ++ RV+ +G +++ ++ Sbjct: 158 ----EVTATLKAEFMTLWDGLLNNGRVMIIGATNRINDID 193 >5UJM-A nrPDB Length = 522 Score = 30.9 bits (68), Expect = 1.6, Method: Composition-based stats. Identities = 21/79 (26%), Positives = 30/79 (37%), Gaps = 9/79 (11%) Query: 169 ISGGPGTGKTTTVAKLLAALIQMADG---------ERCRIRLAAPTGKAAARLTESLGKA 219 ISG PGTGKT TV +++ L Q A E ++L P L + G+ Sbjct: 193 ISGVPGTGKTATVHEVIRCLQQAAQANDVPPFQYIEVNGMKLTEPHQVYVQILQKLTGQK 252 Query: 220 LRQLPLTDEQKKRIPEDAS 238 + K+ S Sbjct: 253 ATANHAAELLAKQFCTRGS 271 >5UJ7-A nrPDB Length = 391 Score = 30.9 bits (68), Expect = 1.6, Method: Composition-based stats. Identities = 21/79 (26%), Positives = 30/79 (37%), Gaps = 9/79 (11%) Query: 169 ISGGPGTGKTTTVAKLLAALIQMADG---------ERCRIRLAAPTGKAAARLTESLGKA 219 ISG PGTGKT TV +++ L Q A E ++L P L + G+ Sbjct: 62 ISGVPGTGKTATVHEVIRCLQQAAQANDVPPFQYIEVNGMKLTEPHQVYVQILQKLTGQK 121 Query: 220 LRQLPLTDEQKKRIPEDAS 238 + K+ S Sbjct: 122 ATANHAAELLAKQFCTRGS 140 >5N6A-A nrPDB Length = 828 Score = 30.9 bits (68), Expect = 1.7, Method: Composition-based stats. Identities = 40/227 (17%), Positives = 77/227 (33%), Gaps = 26/227 (11%) Query: 142 DKLFPVSDEINWQKVAAAVALTRRISVISGGPGTGKTTTVAKLLAALI-----------Q 190 +F +SD N + + I +I+G G GKT +++ + Sbjct: 152 PHIFSISD--NAYQYMLTDRENQSI-LITGESGAGKTVNTKRVIQYFAVIAAIGDRSKKE 208 Query: 191 MADGERC---RIRLAAPT----GKAAARLTESLGKALRQLPLTDEQKKRIPEDASTLHRL 243 A G+ +I A P G A ++ + + + + ++ A L Sbjct: 209 QATGKGTLEDQIIQANPALEAFGNAKTVRNDNSSRFGKFIRIHFGATGKLAS-ADIETYL 267 Query: 244 LGAQPGSQRLRHHAGNPLHLDVLVVDEASMIDLPMMSRLIDALPDHARVIFLGDRDQLAS 303 L +L+ + +L + ++D LI P I G+ + Sbjct: 268 LEKSRVIFQLKAERDYHIFYQILSNKKPELLD----MLLITNNPYDYAFISQGETTVASI 323 Query: 304 VEAGAVLGDICAYANAGFTAERARQLSRLTGTHVPAGTGTEAASLRD 350 +A ++ A+ GFT E + +LTG + G R+ Sbjct: 324 DDAEELMATDNAFDVLGFTTEEKNSMYKLTGAIMHFGNMKFKLKQRE 370 >2CHV-A nrPDB Length = 319 Score = 30.9 bits (68), Expect = 1.8, Method: Composition-based stats. Identities = 62/307 (20%), Positives = 105/307 (34%), Gaps = 52/307 (16%) Query: 165 RISVISGGPGTGKTTTVAKLLAALIQMADGERCR---IRLAAPTGKAAARLTESLGKALR 221 + SG PGTGKT T AL + GE R I + A + + + + R Sbjct: 39 PHLLFSGPPGTGKTATA----IALARDLFGENWRDNFIEMNASDERGIDVVRHKIKEFAR 94 Query: 222 QLPLTDEQKKRIPEDASTLHRLLGAQPGSQRLRHHAGNPLHLD-VLVVDEASMIDLPMMS 280 P+ K I D + L A + R +L + S I P+ S Sbjct: 95 TAPIGGAPFKIIFLDEADA---LTADAQAALRRTMEMYSKSCRFILSCNYVSRIIEPIQS 151 Query: 281 RL----IDALPDHA---RVIFLGDRDQLASVEAGAVLGDICAYANAGFTAERARQLSRLT 333 R +P A R++ + +++ + E G + Y + G R+ Sbjct: 152 RCAVFRFKPVPKEAMKKRLLEICEKEGVKITEDGL---EALIYISGG----DFRKAINAL 204 Query: 334 GTHVPAGTGTEAASLRDSLCLLQKSYRFGSDSGIGQLAAAINRGDKTAVKTVFQQDFTDI 393 G +A D++ + + R + + Q A N + + ++ Sbjct: 205 QGAAAIGEVVDA----DTIYQITATARPEEMTELIQTALKGNFMEARELLDRLMVEY--- 257 Query: 394 EKRLLQSGEDYIAMLEEALAGYGRYLDLLQARAEPDLIIQAFNEYQLLCALREGPFGV-A 452 SGED +A L + + I+ + QL+ L E F + Sbjct: 258 ----GMSGEDIVAQLFREI---------------ISMPIKDSLKVQLIDKLGEVDFRLTE 298 Query: 453 GLNERIE 459 G NERI+ Sbjct: 299 GANERIQ 305 >3LLM-A nrPDB Length = 235 Score = 30.5 bits (67), Expect = 1.9, Method: Composition-based stats. Identities = 23/102 (22%), Positives = 42/102 (41%), Gaps = 3/102 (2%) Query: 124 NEVNHAIEVDEALLAQTLDKLFPVSDEINWQKVAAAVALTRRISVISGGPGTGKTTTV-A 182 NE+ + +E + L L + + + ++ A++ + +I G G GKTT V Sbjct: 38 NELMYQLE-QDHDLQAILQERELLPVKKFESEILEAIS-QNSVVIIRGATGCGKTTQVPQ 95 Query: 183 KLLAALIQMADGERCRIRLAAPTGKAAARLTESLGKALRQLP 224 +L IQ C I + P +A + E + + P Sbjct: 96 FILDDFIQNDRAAECNIVVTQPRRISAVSVAERVAFERGEEP 137 >5FL3-A nrPDB Length = 368 Score = 30.5 bits (67), Expect = 2.0, Method: Composition-based stats. Identities = 10/35 (28%), Positives = 22/35 (62%) Query: 154 QKVAAAVALTRRISVISGGPGTGKTTTVAKLLAAL 188 + + + A R + +++G G+GK+TT+A L+ + Sbjct: 123 EVMESLAAKERGLILVTGPTGSGKSTTLAALIDHI 157 >2P67-A nrPDB Length = 341 Score = 30.5 bits (67), Expect = 2.2, Method: Composition-based stats. Identities = 24/107 (22%), Positives = 39/107 (36%), Gaps = 10/107 (9%) Query: 169 ISGGPGTGKTTTVAKLLAALIQMADGERCRIRLAAPTGKAAARLTESLGKALRQLPLTDE 228 ++G PG GK+T + LI+ +G + + P+ LG R L Sbjct: 61 VTGTPGAGKSTFLEAFGMLLIR--EGLKVAVIAVDPSSPVTG--GSILGDKTRMNDLARA 116 Query: 229 QKKRIPEDASTLHRLLGAQPGSQRLRHHAG--NPLHLDVLVVDEASM 273 + I S+ H SQR R DV++V+ + Sbjct: 117 EAAFIRPVPSSGH----LGGASQRARELMLLCEAAGYDVVIVETVGV 159 >4LJ8-A nrPDB Length = 339 Score = 30.5 bits (67), Expect = 2.4, Method: Composition-based stats. Identities = 28/138 (20%), Positives = 49/138 (35%), Gaps = 20/138 (14%) Query: 171 GGPGTGKTTTVAKLLAALIQMADGE------------RCRIRLAAPTG----KAAARLTE 214 G G GKT L A L + + AP G + +LTE Sbjct: 80 GPTGVGKTELAKTLAATLFDTEEAMIQIDMTEYMEKHAVSRLIGAPPGYVGYEEGGQLTE 139 Query: 215 SLGKALRQLPLTDEQKKRIPEDASTLHRLLGAQPGSQRLRHHAGNPLHLDVLVVDEASMI 274 ++ + + L DE +K P+ + L ++L RL G + V+ S + Sbjct: 140 AVRRRPYSVILFDEIEKAHPDVFNILLQILDDG----RLTDSHGRTVDFRNTVIILTSNL 195 Query: 275 DLPMMSRLIDALPDHARV 292 P++ + + R+ Sbjct: 196 GSPLILEGLQKGWPYERI 213 >1HYQ-A nrPDB Length = 263 Score = 30.2 bits (66), Expect = 2.5, Method: Composition-based stats. Identities = 16/29 (55%), Positives = 18/29 (62%) Query: 164 RRISVISGGPGTGKTTTVAKLLAALIQMA 192 R I+V SG GTGKTT A L AL Q+ Sbjct: 3 RTITVASGKGGTGKTTITANLGVALAQLG 31 >1G3Q-A nrPDB Length = 237 Score = 30.2 bits (66), Expect = 2.7, Method: Composition-based stats. Identities = 15/29 (51%), Positives = 17/29 (58%) Query: 164 RRISVISGGPGTGKTTTVAKLLAALIQMA 192 R IS++SG GTGKTT A L AL Sbjct: 3 RIISIVSGKGGTGKTTVTANLSVALGDRG 31 >5ZFQ-A nrPDB Length = 390 Score = 30.2 bits (66), Expect = 2.8, Method: Composition-based stats. Identities = 11/49 (22%), Positives = 25/49 (51%), Gaps = 1/49 (2%) Query: 141 LDKLFPVSDEINWQKVAAAVALT-RRISVISGGPGTGKTTTVAKLLAAL 188 + +E+ V +A R + +++G G+GK+TT+A ++ + Sbjct: 125 IPYKILTFEELGLPVVVKELAEKPRGLILVTGPTGSGKSTTLAAIIDKI 173 >5VC7-A nrPDB Length = 564 Score = 30.2 bits (66), Expect = 2.8, Method: Composition-based stats. Identities = 19/142 (13%), Positives = 48/142 (33%), Gaps = 25/142 (17%) Query: 167 SVISGGPGTGKTTTVAKLLAALIQMADGERCRIRLAAPTGKAAARLTESLGKALRQLPLT 226 ++ G PGTGKT + A+ + I +++ G++ ++L Sbjct: 46 VILYGPPGTGKTL----IARAVANESGANFLSI-------NGPEIMSKYYGQSEQKLREI 94 Query: 227 DEQKKRIPEDASTLHRLLGAQPGSQRLRHHAGNPLHLDVLVVDEASMIDLPMMSRLIDAL 286 + + + + P + V E + + L+D + Sbjct: 95 FSKAEETAPSIIFIDEIDSIAPKREE--------------VQGEVERRVVAQLLTLMDGM 140 Query: 287 PDHARVIFLGDRDQLASVEAGA 308 + VI +G +++ +++ Sbjct: 141 KERGHVIVIGATNRIDAIDPAL 162 >3OXN-A nrPDB Length = 241 Score = 30.2 bits (66), Expect = 2.8, Method: Composition-based stats. Identities = 20/105 (19%), Positives = 35/105 (33%), Gaps = 8/105 (7%) Query: 188 LIQMADGERCRIRLAAPTGKAAARLTESLGKA-----LRQLPLTDEQKKRIPEDASTLHR 242 L E + + PTG +E LG+ L + Q+ + + S H Sbjct: 60 LSDQLTYEGADLAICRPTGPVEPLRSEILGRVGVLCLLSKQHPLANQEMSLDDYLSHPHA 119 Query: 243 LLGAQPGSQRLRHHAGNPLHLDVLVVDEASMIDLPMMSRLIDALP 287 ++ G + L A +V+ L ++D LP Sbjct: 120 MIAISDGVKALIEQALIDKPQRKMVL---RAYHLEAALAIVDTLP 161 >5G4G-A nrPDB Length = 721 Score = 30.2 bits (66), Expect = 3.1, Method: Composition-based stats. Identities = 19/142 (13%), Positives = 48/142 (33%), Gaps = 25/142 (17%) Query: 167 SVISGGPGTGKTTTVAKLLAALIQMADGERCRIRLAAPTGKAAARLTESLGKALRQLPLT 226 ++ G PGTGKT + A+ + I +++ G++ ++L Sbjct: 222 VILYGPPGTGKTL----IARAVANESGANFLSI-------NGPEIMSKYYGQSEQKLREI 270 Query: 227 DEQKKRIPEDASTLHRLLGAQPGSQRLRHHAGNPLHLDVLVVDEASMIDLPMMSRLIDAL 286 + + + + P + V E + + L+D + Sbjct: 271 FSKAEETAPSIIFIDEIDSIAPKREE--------------VQGEVERRVVAQLLTLMDGM 316 Query: 287 PDHARVIFLGDRDQLASVEAGA 308 + VI +G +++ +++ Sbjct: 317 KERGHVIVIGATNRIDAIDPAL 338 >5D4W-A nrPDB Length = 926 Score = 29.8 bits (65), Expect = 3.3, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 40/123 (32%), Gaps = 16/123 (13%) Query: 146 PVSDEINWQKVAAAVALTRRISVISGGPGTGKTTTVAKLLAALIQ------------MAD 193 VS+ I Q+ + + G GTGKT L L + Sbjct: 609 SVSNAIRLQRSGLSNPNQPPSFLFCGPSGTGKTLLTKALAEFLFDDPKSMIRFDMSEYQE 668 Query: 194 GERCRIRLAAPT----GKAAARLTESLGKALRQLPLTDEQKKRIPEDASTLHRLLGAQPG 249 + AP A +LTE+L + + L D +K E + L +L+ Sbjct: 669 RHSLSRMIGAPPGYVGHDAGGQLTEALRRRPFSILLFDAVEKAAKEVLTVLLQLMDDGRI 728 Query: 250 SQR 252 + Sbjct: 729 TDG 731 >6CHS-H nrPDB Length = 819 Score = 29.8 bits (65), Expect = 3.9, Method: Composition-based stats. Identities = 18/103 (17%), Positives = 35/103 (33%), Gaps = 4/103 (3%) Query: 140 TLDKLFPVSDEINWQKVAAAVALTRRISVISGGPGTGKTTTVAKL---LAALIQMADGER 196 + ++ + + Q + R ++ G PGTGKT + A + +G Sbjct: 231 QIREMVELP-LRHPQLFKSIGIKPPRGVLLYGPPGTGKTLMARAVANETGAFFFLINGPE 289 Query: 197 CRIRLAAPTGKAAARLTESLGKALRQLPLTDEQKKRIPEDAST 239 ++A + + E K + DE P+ T Sbjct: 290 IMSKMAGESESNLRKAFEEAEKNSPAIIFIDEIDSIAPKREKT 332 >1VM8-A nrPDB Length = 534 Score = 29.8 bits (65), Expect = 4.1, Method: Composition-based stats. Identities = 32/157 (20%), Positives = 63/157 (40%), Gaps = 19/157 (12%) Query: 388 QDFTDIEKRLLQSGEDYIAMLEEALAGYGRYLDLLQARAEPDLIIQAFNEYQLLCALRE- 446 + D+++RL Q+G++++ L+ + E + +QA N +L R+ Sbjct: 13 MNVNDLKQRLSQAGQEHLLQFWNELS--------EAQQMELYMELQAMNFEELNSFFRKA 64 Query: 447 -GPFGVAGLNERIEQFMQQKRKIHRHPHSRWYEGRPVMIARNDSALGLF--NGDIGIALD 503 G F + E+++ M+ + R + + A L N + L Sbjct: 65 IGEFDRSSHQEKVDARMEP---VPRQVLGSATRDQEQLQAWESEGLSQISQNKVAVLLLA 121 Query: 504 RGQGTRVWFAMPDGNIKSVQPSRLPEHETTWAMTVHK 540 GQGTR+ + P G + LP H+T + + + Sbjct: 122 GGQGTRLGVSYPKG----MYDVGLPSHKTLFQIQAER 154 >3TK1-A nrPDB Length = 330 Score = 29.8 bits (65), Expect = 4.1, Method: Composition-based stats. Identities = 26/110 (23%), Positives = 44/110 (40%), Gaps = 10/110 (9%) Query: 166 ISVISGGPGTGKTTTVAKLLAALIQMADGERCRIRLAAPTGKAAARLTESLGKALR--QL 223 I+G PG GK+T++ L LI+ R+ + A + LG R +L Sbjct: 58 HVGITGVPGVGKSTSIEALGMHLIEQGH----RVAVLAVDPSSVRSGGSILGDKTRMARL 113 Query: 224 PLTDEQKKRIPEDASTLHRLLGAQPGSQRLRHHAGNPLHLDVLVVDEASM 273 + + R + TL + A + L AG DV++V+ + Sbjct: 114 AVHPDAYVRPSPSSGTLGGVAKATRETIVLLEAAG----FDVVLVETVGV 159 >3PFI-A nrPDB Length = 338 Score = 29.4 bits (64), Expect = 4.5, Method: Composition-based stats. Identities = 22/111 (19%), Positives = 36/111 (32%), Gaps = 19/111 (17%) Query: 157 AAAVALTRRISVISGGPGTGKTTTVAKLLAALIQMADGERCRIRLAAPTGKAAARLTESL 216 A + SG G GKTT + + +A AA + E Sbjct: 48 AKKRNECLDHILFSGPAGLGKTTLANIISYEM-------------SANIKTTAAPMIEKS 94 Query: 217 GKALRQLPLTDEQKKRIPEDASTLHRLLGAQPGSQRLRHHAGNPLHLDVLV 267 G L E ++ +HRL P + + + A LD+++ Sbjct: 95 GDLAAILTNLSEGDILFIDE---IHRL---SPAIEEVLYPAMEDYRLDIII 139 >5HK8-A nrPDB Length = 298 Score = 29.4 bits (64), Expect = 4.8, Method: Composition-based stats. Identities = 10/30 (33%), Positives = 18/30 (60%), Gaps = 1/30 (3%) Query: 267 VVDEASMIDLPMMSRLIDALPDHARVIFLG 296 +V ++ + P+ S L+ LP H +VI +G Sbjct: 93 IVFDSDQYNRPLFS-LLSDLPPHHKVILVG 121 >3BW4-A nrPDB Length = 369 Score = 29.4 bits (64), Expect = 5.2, Method: Composition-based stats. Identities = 13/35 (37%), Positives = 18/35 (51%) Query: 499 GIALDRGQGTRVWFAMPDGNIKSVQPSRLPEHETT 533 G+AL GQG R+ +P G + V + L E T Sbjct: 316 GMALYAGQGHRMARELPAGRLVEVLAAELAEARTA 350 >1QVR-A nrPDB Length = 854 Score = 29.0 bits (63), Expect = 5.4, Method: Composition-based stats. Identities = 28/138 (20%), Positives = 49/138 (35%), Gaps = 20/138 (14%) Query: 171 GGPGTGKTTTVAKLLAALIQMADGE------------RCRIRLAAPTG----KAAARLTE 214 G G GKT L A L + + AP G + +LTE Sbjct: 595 GPTGVGKTELAKTLAATLFDTEEAMIRIDMTEYMEKHAVSRLIGAPPGYVGYEEGGQLTE 654 Query: 215 SLGKALRQLPLTDEQKKRIPEDASTLHRLLGAQPGSQRLRHHAGNPLHLDVLVVDEASMI 274 ++ + + L DE +K P+ + L ++L RL G + V+ S + Sbjct: 655 AVRRRPYSVILFDEIEKAHPDVFNILLQILDDG----RLTDSHGRTVDFRNTVIILTSNL 710 Query: 275 DLPMMSRLIDALPDHARV 292 P++ + + R+ Sbjct: 711 GSPLILEGLQKGWPYERI 728 >4C2U-A nrPDB Length = 665 Score = 29.0 bits (63), Expect = 5.5, Method: Composition-based stats. Identities = 17/51 (33%), Positives = 24/51 (47%) Query: 167 SVISGGPGTGKTTTVAKLLAALIQMADGERCRIRLAAPTGKAAARLTESLG 217 +++ G G+GKT T+ +A LI I T KAAA + E G Sbjct: 28 ALVIAGAGSGKTRTLIYRIAHLIGHYGVHPGEILAVTFTNKAAAEMRERAG 78 >2HYI-C nrPDB Length = 413 Score = 29.0 bits (63), Expect = 5.6, Method: Composition-based stats. Identities = 30/157 (19%), Positives = 56/157 (35%), Gaps = 13/157 (8%) Query: 154 QKVAAAVALTRRISVISGGPGTGKTTTVAKLLAALIQMADGERCRIRLAAPTGKAAARLT 213 Q+ A + R + GTGKT T + + + + + + APT + A ++ Sbjct: 65 QQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDI-QVRETQALILAPTRELAVQIQ 123 Query: 214 E---SLGKALRQLPLTDEQKKRIPEDASTL----HRLLGA-QPGSQRLRHHAGNPLHLDV 265 + +LG + + ED L H + G +R + + + Sbjct: 124 KGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKM 183 Query: 266 LVVDEASMIDLPMMSRLI----DALPDHARVIFLGDR 298 LV+DEA + I LP +V+ + Sbjct: 184 LVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISAT 220 >2CHG-A nrPDB Length = 226 Score = 29.0 bits (63), Expect = 5.6, Method: Composition-based stats. Identities = 9/17 (52%), Positives = 10/17 (58%) Query: 165 RISVISGGPGTGKTTTV 181 + SG PGTGKT T Sbjct: 39 PHLLFSGPPGTGKTATA 55 >4C2T-A nrPDB Length = 745 Score = 29.0 bits (63), Expect = 5.6, Method: Composition-based stats. Identities = 17/51 (33%), Positives = 24/51 (47%) Query: 167 SVISGGPGTGKTTTVAKLLAALIQMADGERCRIRLAAPTGKAAARLTESLG 217 +++ G G+GKT T+ +A LI I T KAAA + E G Sbjct: 28 ALVIAGAGSGKTRTLIYRIAHLIGHYGVHPGEILAVTFTNKAAAEMRERAG 78 >5C18-A nrPDB Length = 785 Score = 29.0 bits (63), Expect = 6.7, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 28/78 (35%), Gaps = 3/78 (3%) Query: 165 RISVISGGPGTGKTTTVAKL---LAALIQMADGERCRIRLAAPTGKAAARLTESLGKALR 221 R ++ G PGTGKT + A + +G +LA + + E K Sbjct: 238 RGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAP 297 Query: 222 QLPLTDEQKKRIPEDAST 239 + DE P+ T Sbjct: 298 AIIFIDELDAIAPKREKT 315 >3HU1-A nrPDB Length = 489 Score = 29.0 bits (63), Expect = 6.7, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 28/78 (35%), Gaps = 3/78 (3%) Query: 165 RISVISGGPGTGKTTTVAKL---LAALIQMADGERCRIRLAAPTGKAAARLTESLGKALR 221 R ++ G PGTGKT + A + +G +LA + + E K Sbjct: 239 RGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAP 298 Query: 222 QLPLTDEQKKRIPEDAST 239 + DE P+ T Sbjct: 299 AIIFIDELDAIAPKREKT 316 >6MCK-A nrPDB Length = 606 Score = 28.6 bits (62), Expect = 7.1, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 28/78 (35%), Gaps = 3/78 (3%) Query: 165 RISVISGGPGTGKTTTVAKL---LAALIQMADGERCRIRLAAPTGKAAARLTESLGKALR 221 R ++ G PGTGKT + A + +G +LA + + E K Sbjct: 31 RGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAP 90 Query: 222 QLPLTDEQKKRIPEDAST 239 + DE P+ T Sbjct: 91 AIIFIDELDAIAPKREKT 108 >4I1U-A nrPDB Length = 210 Score = 28.6 bits (62), Expect = 7.5, Method: Composition-based stats. Identities = 16/51 (31%), Positives = 25/51 (49%) Query: 169 ISGGPGTGKTTTVAKLLAALIQMADGERCRIRLAAPTGKAAARLTESLGKA 219 ++GG G+GKTT A + D + R+ AP G A + ++ G A Sbjct: 14 LTGGIGSGKTTVADLFAARGASLVDTDLIAHRITAPAGLAMPAIEQTFGPA 64 >6MDP-A nrPDB Length = 768 Score = 28.6 bits (62), Expect = 7.7, Method: Composition-based stats. Identities = 16/87 (18%), Positives = 32/87 (36%), Gaps = 7/87 (8%) Query: 167 SVISGGPGTGKTTTVAKLLAALIQMADGERCRIRLAAPTGKAAARLTESLGKALRQLPLT 226 ++ G P +GKT AK+ + I++ +P T +A++++ Sbjct: 563 VLLEGPPHSGKTALAAKIAE------ESNFPFIKICSPDKMIGFSETAKC-QAMKKIFDD 615 Query: 227 DEQKKRIPEDASTLHRLLGAQPGSQRL 253 + + + RLL P R Sbjct: 616 AYKSQLSCVVVDDIERLLDYVPIGPRF 642 >1D2N-A nrPDB Length = 272 Score = 28.6 bits (62), Expect = 7.7, Method: Composition-based stats. Identities = 16/87 (18%), Positives = 32/87 (36%), Gaps = 7/87 (8%) Query: 167 SVISGGPGTGKTTTVAKLLAALIQMADGERCRIRLAAPTGKAAARLTESLGKALRQLPLT 226 ++ G P +GKT AK+ + I++ +P T +A++++ Sbjct: 67 VLLEGPPHSGKTALAAKIAE------ESNFPFIKICSPDKMIGFSETAKC-QAMKKIFDD 119 Query: 227 DEQKKRIPEDASTLHRLLGAQPGSQRL 253 + + + RLL P R Sbjct: 120 AYKSQLSCVVVDDIERLLDYVPIGPRF 146 >1XMS-A nrPDB Length = 356 Score = 28.6 bits (62), Expect = 8.8, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 26/69 (37%) Query: 165 RISVISGGPGTGKTTTVAKLLAALIQMADGERCRIRLAAPTGKAAARLTESLGKALRQLP 224 RI I G +GKTT +++AA + A A +L + L P Sbjct: 64 RIVEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPIYARKLGVDIDNLLCSQP 123 Query: 225 LTDEQKKRI 233 T EQ I Sbjct: 124 DTGEQALEI 132 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.313 0.123 0.321 Lambda K H 0.267 0.0376 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 20,817,698 Number of Sequences: 36641 Number of extensions: 799863 Number of successful extensions: 2999 Number of sequences better than 10.0: 91 Number of HSP's better than 10.0 without gapping: 59 Number of HSP's successfully gapped in prelim test: 75 Number of HSP's that attempted gapping in prelim test: 2877 Number of HSP's gapped (non-prelim): 165 length of query: 608 length of database: 10,336,785 effective HSP length: 103 effective length of query: 505 effective length of database: 6,562,762 effective search space: 3314194810 effective search space used: 3314194810 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.5 bits) S2: 62 (28.6 bits)