BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= P04387 (435 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 3BTS-A nrPDB 896 0.0 3E1K-A nrPDB 541 e-154 3GDO-A nrPDB 53 3e-07 3I23-A nrPDB 52 7e-07 1ZH8-A nrPDB 47 1e-05 3RC7-A nrPDB 45 5e-05 3F4L-A nrPDB 45 6e-05 3HNP-A nrPDB 41 0.001 3P9Z-A nrPDB 32 0.75 5D3I-A nrPDB 31 0.99 1KAN-A nrPDB 30 1.8 4M46-A nrPDB 29 3.3 1LC0-A nrPDB 29 3.4 4LMH-A nrPDB 29 4.9 >3BTS-A nrPDB Length = 438 Score = 896 bits (2315), Expect = 0.0, Method: Compositional matrix adjust. Identities = 434/435 (99%), Positives = 434/435 (99%) Query: 1 MDYNKRSSVSTVPNAAPIRVGFVGLNAAKGWAIKTHYPAILQLSSQFQITALYSPKIETS 60 MDYNKRSSVSTVPNAAPIRVGFVGLNAAKGWAIKTHYPAILQLSSQFQITALYSPKIETS Sbjct: 4 MDYNKRSSVSTVPNAAPIRVGFVGLNAAKGWAIKTHYPAILQLSSQFQITALYSPKIETS 63 Query: 61 IATIQRLKLSNATAFPTLESFASSSTIDMIVIAIQVASHYEVVMPLLEFSKNNPNLKYLF 120 IATIQRLKLSNATAFPTLESFASSSTIDMIVIAIQVASHYEVVMPLLEFSKNNPNLKYLF Sbjct: 64 IATIQRLKLSNATAFPTLESFASSSTIDMIVIAIQVASHYEVVMPLLEFSKNNPNLKYLF 123 Query: 121 VEWALACSLDQAESIYKAAAERGVQTIISLQGRKSPYILRAKELISQGYIGDINSIEIAG 180 VEWALACSLDQAESIYKAAAERGVQTIISLQGRKSPYILRAKELISQGYIGDINSIEIAG Sbjct: 124 VEWALACSLDQAESIYKAAAERGVQTIISLQGRKSPYILRAKELISQGYIGDINSIEIAG 183 Query: 181 NGGWYGYERPVKSPKYIYEIGNGVDLVTTTFGHTIDILQYMTSSYFSRINAMVFNNIPEQ 240 NGGWYGYERPVKSPKYIYEIGNGVDLVTTTFGHTIDILQYMTSSYFSRINAMVFNNIPEQ Sbjct: 184 NGGWYGYERPVKSPKYIYEIGNGVDLVTTTFGHTIDILQYMTSSYFSRINAMVFNNIPEQ 243 Query: 241 ELIDERGNRLGQRVPKTVPDHLLFQGTLLNGNVPVSCSFKGGKPTKKFTKNLVIDIHGTK 300 ELIDERGNRLGQRVPKTVPDHLLFQGTLLNGNVPVSCSFKGGKPTKKFTKNLVIDIHGTK Sbjct: 244 ELIDERGNRLGQRVPKTVPDHLLFQGTLLNGNVPVSCSFKGGKPTKKFTKNLVIDIHGTK 303 Query: 301 GDLKLEGDAGFAEISNLVLYYSGTRANDFPLANGQQAPLDPGYDAGKEIMEVYHLRNYNA 360 DLKLEGDAGFAEISNLVLYYSGTRANDFPLANGQQAPLDPGYDAGKEIMEVYHLRNYNA Sbjct: 304 RDLKLEGDAGFAEISNLVLYYSGTRANDFPLANGQQAPLDPGYDAGKEIMEVYHLRNYNA 363 Query: 361 IVGNIHRLYQSISDFHFNTKKIPELPSQFVMQGFDFEGFPTLMDALILHRLIESVYKSNM 420 IVGNIHRLYQSISDFHFNTKKIPELPSQFVMQGFDFEGFPTLMDALILHRLIESVYKSNM Sbjct: 364 IVGNIHRLYQSISDFHFNTKKIPELPSQFVMQGFDFEGFPTLMDALILHRLIESVYKSNM 423 Query: 421 MGSTLNVSNISHYSL 435 MGSTLNVSNISHYSL Sbjct: 424 MGSTLNVSNISHYSL 438 >3E1K-A nrPDB Length = 465 Score = 541 bits (1393), Expect = e-154, Method: Compositional matrix adjust. Identities = 268/457 (58%), Positives = 339/457 (74%), Gaps = 29/457 (6%) Query: 1 MDYNKRSSVSTVPNAAPIRVGFVGLNAAKGWAIKTHYPAILQLSSQFQITALYSPKIETS 60 M+ NKRS +STVP++ PIRVGFVGL + K W KTH+ AI QLSSQFQI ALY+P +++S Sbjct: 1 MNNNKRSKLSTVPSSRPIRVGFVGLTSGKSWVAKTHFLAIQQLSSQFQIVALYNPTLKSS 60 Query: 61 IATIQRLKLSNATAFPTLESFASSSTIDMIVIAIQVASHYEVVMPLLEFSKNNPNLKYLF 120 + TI++L+L +AT F +LESFA IDMIV++++V HYEVV +LE S N NL+YL+ Sbjct: 61 LQTIEQLQLKHATGFDSLESFAQYKDIDMIVVSVKVPEHYEVVKNILEHSSQNLNLRYLY 120 Query: 121 VEWALACSLDQAESIYKAAAERG-VQTIISLQGRKSPYILRAKELISQGYIGDINSIEIA 179 VEWALA S+ QAE +Y + +R +QTII LQGRKSPYI+RAKELIS+G IGDINSIEI+ Sbjct: 121 VEWALAASVQQAEELYSISQQRANLQTIICLQGRKSPYIVRAKELISEGCIGDINSIEIS 180 Query: 180 GNGGWYGYERPVKSPKYIYEIGNGVDLVTTTFGHTIDILQYMTSSYFSRINAMVFNNIPE 239 GNGGWYGYERP++SP+Y+Y+I +GV+L++ +FGHTID+LQY+T SYF +INAM+ NNIP Sbjct: 181 GNGGWYGYERPMRSPEYLYDIESGVNLISNSFGHTIDVLQYITGSYFQKINAMISNNIPT 240 Query: 240 QELIDERGNRLGQRVPKTVPDHLLFQGTLLNGNVPVSCSFKGGKPTKKFTKNLVIDIHGT 299 Q L+DE G R + + KT PDHLLFQG L NG VPVSCSFKGG P KK TKNLVIDIHGT Sbjct: 241 QFLLDENGKRTKETISKTCPDHLLFQGILENGKVPVSCSFKGGTPVKKLTKNLVIDIHGT 300 Query: 300 KGDLKLEGDAGFAEISNLVLYYSGTR----ANDFPLANGQQAPLDP-----------GYD 344 KGDLK+EGDAGF EISNLVLY+ G + +++ NG A D G Sbjct: 301 KGDLKIEGDAGFVEISNLVLYFYGIKNGNGSSNGTDNNGAAAIKDKEKVTKSPSPSTGTS 360 Query: 345 AGKEIMEVYHLRNYNAIVGNIHRLYQSISDFHFNTKKIPELPS-----------QFVMQG 393 ++ MEV+HLRNYN++VGNI R+Y+SI+D+HF K PE S +F QG Sbjct: 361 EEEQTMEVFHLRNYNSVVGNILRIYESIADYHFLGK--PESKSSRGPDDLFASTKFDKQG 418 Query: 394 FDFEGFPTLMDALILHRLIESVYKSNMMGSTLNVSNI 430 F FEGFPT DA+ILHRLI++V++S+ TL+VS I Sbjct: 419 FRFEGFPTFKDAIILHRLIDAVFRSDKEEKTLDVSKI 455 >3GDO-A nrPDB Length = 358 Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 50/224 (22%), Positives = 96/224 (42%), Gaps = 24/224 (10%) Query: 18 IRVGFVGLNAAKGWAIKTHYPAILQLSSQFQITALYSPKIETSIATIQRLKLSNATAFPT 77 I+VG +G G + + +L + ++QI+ KI TS + +A Sbjct: 6 IKVGILGY----GLSGSVFHGPLLDVLDEYQIS-----KIMTSRTEEVKRDFPDAEVVHE 56 Query: 78 LESFASSSTIDMIVIAIQVASHYEVVMPLLEFSKNNPNLKYLFVEWALACSLDQAESIYK 137 LE + I+++++ HYE M ++ K ++ +E + + ++ E++ + Sbjct: 57 LEEITNDPAIELVIVTTPSGLHYEHTMACIQAGK------HVVMEKPMTATAEEGETLKR 110 Query: 138 AAAERGVQTIISLQGRKSPYILRAKELISQGYIGDINSIEIAGNGGWYGYERPVKSPKYI 197 AA E+GV + R L K+LIS+G + DIN+ +++ Y RP ++ Sbjct: 111 AADEKGVLLSVYHNRRWDNDFLTIKKLISEGSLEDINTYQVS-----YNRYRPEVQARWR 165 Query: 198 YEIGNGVDLVTTTFGHTIDILQYMTSSYFSRINAMVFNNIPEQE 241 + G + H ID T F A+ N + ++E Sbjct: 166 EKEGTATGTLYDLGSHIID----QTLHLFGMPKAVTANVMAQRE 205 >3I23-A nrPDB Length = 349 Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 35/160 (21%), Positives = 72/160 (45%), Gaps = 12/160 (7%) Query: 18 IRVGFVGLNAAKGWAIKTHYPAILQLSSQFQITALYSPKIETSIATIQRLKLSNATAFPT 77 +++GF+G + A + H P ++ + ++ ++ + A + K N TA Sbjct: 3 VKMGFIGFGKS---ANRYHLPYVM-IRETLEVKTIFDLHVNEKAAAPFKEKGVNFTA--D 56 Query: 78 LESFASSSTIDMIVIAIQVASHYEVVMPLLEFSKNNPNLKYLFVEWALACSLDQAESIYK 137 L + I++I I +HY++ + K+ + VE +L+ AE ++ Sbjct: 57 LNELLTDPEIELITICTPAHTHYDLAKQAILAGKS------VIVEKPFCDTLEHAEELFA 110 Query: 138 AAAERGVQTIISLQGRKSPYILRAKELISQGYIGDINSIE 177 E+GV + R L K+++ QG++G+IN +E Sbjct: 111 LGQEKGVVVMPYQNRRFDGDYLAMKQVVEQGFLGEINEVE 150 >1ZH8-A nrPDB Length = 340 Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 39/155 (25%), Positives = 71/155 (45%), Gaps = 11/155 (7%) Query: 18 IRVGFVGLNAAKGWAIKTHYPAILQLSSQFQITALYSPKIETSIATIQRLKLSNATAFPT 77 IR+G VG A A + H PA+ LS F+ITA+ S + + ++ + N F + Sbjct: 19 IRLGIVGCGIA---ARELHLPALKNLSHLFEITAVTS-RTRSHAEEFAKM-VGNPAVFDS 73 Query: 78 LESFASSSTIDMIVIAIQVASHYEVVMPLLEFSKNNPNLKYLFVEWALACSLDQAESIYK 137 E S +D + + + V E+ +P +E K ++ E ++ ++ + + + Sbjct: 74 YEELLESGLVDAVDLTLPV----ELNLPFIE--KALRKGVHVICEKPISTDVETGKKVVE 127 Query: 138 AAAERGVQTIISLQGRKSPYILRAKELISQGYIGD 172 + + I+ R P +AKEL+ G IGD Sbjct: 128 LSEKSEKTVYIAENFRHVPAFWKAKELVESGAIGD 162 >3RC7-A nrPDB Length = 350 Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 39/163 (23%), Positives = 68/163 (41%), Gaps = 13/163 (7%) Query: 14 NAAPIRVGFVGLNAAKGWAIKTHYPAILQLSSQFQITALYSPKIETSIATIQRLKLSNAT 73 NA PIRVG +G A W + PA L+ ++TA+ S + + + +R Sbjct: 24 NANPIRVGVIGC-ADIAW--RRALPA-LEAEPLTEVTAIASRRWDRAKRFTERFGGEPVE 79 Query: 74 AFPTLESFASSSTIDMIVIAIQVASHYEVVMPLLEFSKNNPNLKYLFVEWALACSLDQAE 133 +P L +D + + + H E + L K ++ E L QAE Sbjct: 80 GYPAL---LERDDVDAVYVPLPAVLHAEWIDRALRAGK------HVLAEKPLTTDRPQAE 130 Query: 134 SIYKAAAERGVQTIISLQGRKSPYILRAKELISQGYIGDINSI 176 ++ A ERG+ + + P + +++ +G IG+I S Sbjct: 131 RLFAVARERGLLLMENFMFLHHPQHRQVADMLDEGVIGEIRSF 173 >3F4L-A nrPDB Length = 345 Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 40/181 (22%), Positives = 72/181 (39%), Gaps = 23/181 (12%) Query: 18 IRVGFVGLNAAKGWAIKTHYPAILQLSSQFQITALYS--PKIETSIATIQRLKLSNATAF 75 I F+G + + H P +L + + ++ K E + ++ Sbjct: 3 INCAFIGFGKS---TTRYHLPYVLNRKDSWHVAHIFRRHAKPEEQAPIYSHIHFTS---- 55 Query: 76 PTLESFASSSTIDMIVIAIQVASHYEVVMPLLEFSKNNPNLKYLFVEWALACSLDQAESI 135 L+ + + ++V+ SH+E LE KN + VE +L QA+ + Sbjct: 56 -DLDEVLNDPDVKLVVVCTHADSHFEYAKRALEAGKN------VLVEKPFTPTLAQAKEL 108 Query: 136 YKAAAERGVQTIISLQGRK-SPYILRAKELISQGYIGDINSIEIAGNGGWYGYERPVKSP 194 + A +G+ T+ Q R+ L AK+ I G +G+I +E + Y RPV Sbjct: 109 FALAKSKGL-TVTPYQNRRFDSCFLTAKKAIESGKLGEIVEVE-----SHFDYYRPVAET 162 Query: 195 K 195 K Sbjct: 163 K 163 >3HNP-A nrPDB Length = 353 Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust. Identities = 34/161 (21%), Positives = 69/161 (42%), Gaps = 14/161 (8%) Query: 18 IRVGFVGLNAAKGWAIKTHYPAILQLSSQFQITALYSPKIETSIATIQRLKLSNATAFPT 77 + +GF+G + A + H P L+ + ++ ++ +I +A F T Sbjct: 3 LTMGFIGFGKS---ANRYHLP-YLKTRNNIKVKTIFVRQINEELAAPYE---ERGVYFTT 55 Query: 78 -LESFASSSTIDMIVIAIQVASHYEVVMPLLEFSKNNPNLKYLFVEWALACSLDQAESIY 136 L+ + I ++ I +HYE+ ++ K+ + VE +++ A+ + Sbjct: 56 DLDELLNDKEIQVVTICTPAHTHYELAKKVILAGKS------VIVEKPFCDTVEHAKELL 109 Query: 137 KAAAERGVQTIISLQGRKSPYILRAKELISQGYIGDINSIE 177 E+GV + R L K+++ QG++GDI IE Sbjct: 110 ALGREKGVVVMPYQNRRFDGDFLAVKQVVEQGFLGDIIEIE 150 >3P9Z-A nrPDB Length = 229 Score = 31.6 bits (70), Expect = 0.75, Method: Compositional matrix adjust. Identities = 28/75 (37%), Positives = 36/75 (48%), Gaps = 11/75 (14%) Query: 103 VMPLLEFSKNNPNLKYLFVEWALACSLDQAESIY-----------KAAAERGVQTIISLQ 151 V LLE KN+P LK L A A S A+++ KA + VQ I L Sbjct: 49 VFSLLETLKNSPKLKMLQNIPAYALSEPTAKTLQDHHFKVAFMGEKAHGKEFVQEIFPLL 108 Query: 152 GRKSPYILRAKELIS 166 +KS LRAKE++S Sbjct: 109 EKKSVLYLRAKEIVS 123 >5D3I-A nrPDB Length = 568 Score = 31.2 bits (69), Expect = 0.99, Method: Compositional matrix adjust. Identities = 29/137 (21%), Positives = 64/137 (46%), Gaps = 19/137 (13%) Query: 6 RSSVSTVPNAA--PIRVGFVGLNAAKGWAIKTHYPAILQL----SSQFQITALYSPKIET 59 R++ +P++ P ++ F+ L++ +KT P L++ ++ +L+ P+++ Sbjct: 400 RNTFHPMPDSCQWPEKMRFLNLSSTGIRVVKTCIPQTLEVLDVSNNNLDSFSLFLPRLQE 459 Query: 60 SIATIQRLK-LSNATAFPTL------ESFASSSTIDMIVIAIQVAS------HYEVVMPL 106 + +LK L +A+ FP L E+ S+ + D + ++ + H+ L Sbjct: 460 LYISRNKLKTLPDASLFPVLLVMKIRENAVSTFSKDQLGSFPKLETLEAGDNHFVCSCEL 519 Query: 107 LEFSKNNPNLKYLFVEW 123 L F+ P L + V+W Sbjct: 520 LSFTMETPALAQILVDW 536 >1KAN-A nrPDB Length = 253 Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust. Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 3/56 (5%) Query: 299 TKGDLKLEGDAGFAEISNLVLYYSGTRANDFPLANGQQAPLDPGYDAGKEIMEVYH 354 T G+ K+E + EI +L Y+ +D+PL +GQ + P YD+G + +VY Sbjct: 69 TTGEWKVEVNFYSEEI---LLDYASQVESDWPLTHGQFFSILPIYDSGGYLEKVYQ 121 >4M46-A nrPDB Length = 581 Score = 29.3 bits (64), Expect = 3.3, Method: Compositional matrix adjust. Identities = 15/45 (33%), Positives = 26/45 (57%) Query: 43 LSSQFQITALYSPKIETSIATIQRLKLSNATAFPTLESFASSSTI 87 L+ F+I +Y + E + ++Q K+ +A PTL SF + ST+ Sbjct: 290 LTCGFRIVLMYRFEEELFLRSLQDYKIQSALLVPTLFSFFAKSTL 334 >1LC0-A nrPDB Length = 294 Score = 29.3 bits (64), Expect = 3.4, Method: Compositional matrix adjust. Identities = 17/67 (25%), Positives = 34/67 (50%), Gaps = 6/67 (8%) Query: 77 TLESFASSSTIDMIVIAIQVASHYEVVMPLLEFSKNNPNLKYLFVEWALACSLDQAESIY 136 +LE S ID+ I + +SH + + L+ K++ VE+ + S A+ ++ Sbjct: 56 SLEDALRSQEIDVAYICSESSSHEDYIRQFLQAG------KHVLVEYPMTLSFAAAQELW 109 Query: 137 KAAAERG 143 + AA++G Sbjct: 110 ELAAQKG 116 >4LMH-A nrPDB Length = 760 Score = 28.9 bits (63), Expect = 4.9, Method: Compositional matrix adjust. Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 1/48 (2%) Query: 261 HLLFQGTLLNGNVPVSCSFKGGKPTKKF-TKNLVIDIHGTKGDLKLEG 307 H+ G +LNG + + T + +++ HG KG+LKLEG Sbjct: 691 HIETNGGILNGTSAADVQTRASESCATCHTPSQLMEAHGNKGELKLEG 738 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 3BTS-A nrPDB 741 0.0 3E1K-A nrPDB 632 0.0 3GDO-A nrPDB 229 2e-60 3I23-A nrPDB 190 1e-48 3F4L-A nrPDB 189 2e-48 3HNP-A nrPDB 187 8e-48 3RC7-A nrPDB 169 3e-42 1ZH8-A nrPDB 152 3e-37 Sequences not found previously or not previously below threshold: 2GLX-A nrPDB 87 1e-17 3EZY-A nrPDB 79 3e-15 3EC7-A nrPDB 79 4e-15 3NT2-A nrPDB 79 5e-15 2Q4E-A nrPDB 76 2e-14 2O4U-X nrPDB 76 2e-14 1EVJ-A nrPDB 75 7e-14 4KOA-A nrPDB 75 7e-14 4MIE-A nrPDB 75 7e-14 3OQB-A nrPDB 69 3e-12 4EW6-A nrPDB 68 6e-12 4HKT-A nrPDB 68 9e-12 3IP3-A nrPDB 66 3e-11 2IXB-A nrPDB 63 2e-10 6JNK-A nrPDB 61 1e-09 5UIA-A nrPDB 60 2e-09 2H63-A nrPDB 58 9e-09 3EUW-A nrPDB 57 2e-08 1LC0-A nrPDB 56 2e-08 3OA2-A nrPDB 51 8e-07 6D24-C nrPDB 34 0.20 4RAX-A nrPDB 31 1.3 6IGZ-6 nrPDB 31 1.3 2EGZ-A nrPDB 31 1.3 6E07-L nrPDB 30 1.5 2Q49-A nrPDB 30 2.7 4V6H-A nrPDB 29 3.0 3OT7-A nrPDB 28 7.6 2QC3-A nrPDB 28 10.0 >3BTS-A nrPDB Length = 438 Score = 741 bits (1913), Expect = 0.0, Method: Composition-based stats. Identities = 434/435 (99%), Positives = 434/435 (99%) Query: 1 MDYNKRSSVSTVPNAAPIRVGFVGLNAAKGWAIKTHYPAILQLSSQFQITALYSPKIETS 60 MDYNKRSSVSTVPNAAPIRVGFVGLNAAKGWAIKTHYPAILQLSSQFQITALYSPKIETS Sbjct: 4 MDYNKRSSVSTVPNAAPIRVGFVGLNAAKGWAIKTHYPAILQLSSQFQITALYSPKIETS 63 Query: 61 IATIQRLKLSNATAFPTLESFASSSTIDMIVIAIQVASHYEVVMPLLEFSKNNPNLKYLF 120 IATIQRLKLSNATAFPTLESFASSSTIDMIVIAIQVASHYEVVMPLLEFSKNNPNLKYLF Sbjct: 64 IATIQRLKLSNATAFPTLESFASSSTIDMIVIAIQVASHYEVVMPLLEFSKNNPNLKYLF 123 Query: 121 VEWALACSLDQAESIYKAAAERGVQTIISLQGRKSPYILRAKELISQGYIGDINSIEIAG 180 VEWALACSLDQAESIYKAAAERGVQTIISLQGRKSPYILRAKELISQGYIGDINSIEIAG Sbjct: 124 VEWALACSLDQAESIYKAAAERGVQTIISLQGRKSPYILRAKELISQGYIGDINSIEIAG 183 Query: 181 NGGWYGYERPVKSPKYIYEIGNGVDLVTTTFGHTIDILQYMTSSYFSRINAMVFNNIPEQ 240 NGGWYGYERPVKSPKYIYEIGNGVDLVTTTFGHTIDILQYMTSSYFSRINAMVFNNIPEQ Sbjct: 184 NGGWYGYERPVKSPKYIYEIGNGVDLVTTTFGHTIDILQYMTSSYFSRINAMVFNNIPEQ 243 Query: 241 ELIDERGNRLGQRVPKTVPDHLLFQGTLLNGNVPVSCSFKGGKPTKKFTKNLVIDIHGTK 300 ELIDERGNRLGQRVPKTVPDHLLFQGTLLNGNVPVSCSFKGGKPTKKFTKNLVIDIHGTK Sbjct: 244 ELIDERGNRLGQRVPKTVPDHLLFQGTLLNGNVPVSCSFKGGKPTKKFTKNLVIDIHGTK 303 Query: 301 GDLKLEGDAGFAEISNLVLYYSGTRANDFPLANGQQAPLDPGYDAGKEIMEVYHLRNYNA 360 DLKLEGDAGFAEISNLVLYYSGTRANDFPLANGQQAPLDPGYDAGKEIMEVYHLRNYNA Sbjct: 304 RDLKLEGDAGFAEISNLVLYYSGTRANDFPLANGQQAPLDPGYDAGKEIMEVYHLRNYNA 363 Query: 361 IVGNIHRLYQSISDFHFNTKKIPELPSQFVMQGFDFEGFPTLMDALILHRLIESVYKSNM 420 IVGNIHRLYQSISDFHFNTKKIPELPSQFVMQGFDFEGFPTLMDALILHRLIESVYKSNM Sbjct: 364 IVGNIHRLYQSISDFHFNTKKIPELPSQFVMQGFDFEGFPTLMDALILHRLIESVYKSNM 423 Query: 421 MGSTLNVSNISHYSL 435 MGSTLNVSNISHYSL Sbjct: 424 MGSTLNVSNISHYSL 438 >3E1K-A nrPDB Length = 465 Score = 632 bits (1629), Expect = 0.0, Method: Composition-based stats. Identities = 268/457 (58%), Positives = 339/457 (74%), Gaps = 29/457 (6%) Query: 1 MDYNKRSSVSTVPNAAPIRVGFVGLNAAKGWAIKTHYPAILQLSSQFQITALYSPKIETS 60 M+ NKRS +STVP++ PIRVGFVGL + K W KTH+ AI QLSSQFQI ALY+P +++S Sbjct: 1 MNNNKRSKLSTVPSSRPIRVGFVGLTSGKSWVAKTHFLAIQQLSSQFQIVALYNPTLKSS 60 Query: 61 IATIQRLKLSNATAFPTLESFASSSTIDMIVIAIQVASHYEVVMPLLEFSKNNPNLKYLF 120 + TI++L+L +AT F +LESFA IDMIV++++V HYEVV +LE S N NL+YL+ Sbjct: 61 LQTIEQLQLKHATGFDSLESFAQYKDIDMIVVSVKVPEHYEVVKNILEHSSQNLNLRYLY 120 Query: 121 VEWALACSLDQAESIYKAAAERG-VQTIISLQGRKSPYILRAKELISQGYIGDINSIEIA 179 VEWALA S+ QAE +Y + +R +QTII LQGRKSPYI+RAKELIS+G IGDINSIEI+ Sbjct: 121 VEWALAASVQQAEELYSISQQRANLQTIICLQGRKSPYIVRAKELISEGCIGDINSIEIS 180 Query: 180 GNGGWYGYERPVKSPKYIYEIGNGVDLVTTTFGHTIDILQYMTSSYFSRINAMVFNNIPE 239 GNGGWYGYERP++SP+Y+Y+I +GV+L++ +FGHTID+LQY+T SYF +INAM+ NNIP Sbjct: 181 GNGGWYGYERPMRSPEYLYDIESGVNLISNSFGHTIDVLQYITGSYFQKINAMISNNIPT 240 Query: 240 QELIDERGNRLGQRVPKTVPDHLLFQGTLLNGNVPVSCSFKGGKPTKKFTKNLVIDIHGT 299 Q L+DE G R + + KT PDHLLFQG L NG VPVSCSFKGG P KK TKNLVIDIHGT Sbjct: 241 QFLLDENGKRTKETISKTCPDHLLFQGILENGKVPVSCSFKGGTPVKKLTKNLVIDIHGT 300 Query: 300 KGDLKLEGDAGFAEISNLVLYYSGTR----ANDFPLANGQQAPLDP-----------GYD 344 KGDLK+EGDAGF EISNLVLY+ G + +++ NG A D G Sbjct: 301 KGDLKIEGDAGFVEISNLVLYFYGIKNGNGSSNGTDNNGAAAIKDKEKVTKSPSPSTGTS 360 Query: 345 AGKEIMEVYHLRNYNAIVGNIHRLYQSISDFHFNTKKIPELPS-----------QFVMQG 393 ++ MEV+HLRNYN++VGNI R+Y+SI+D+HF K PE S +F QG Sbjct: 361 EEEQTMEVFHLRNYNSVVGNILRIYESIADYHFLGK--PESKSSRGPDDLFASTKFDKQG 418 Query: 394 FDFEGFPTLMDALILHRLIESVYKSNMMGSTLNVSNI 430 F FEGFPT DA+ILHRLI++V++S+ TL+VS I Sbjct: 419 FRFEGFPTFKDAIILHRLIDAVFRSDKEEKTLDVSKI 455 >3GDO-A nrPDB Length = 358 Score = 229 bits (583), Expect = 2e-60, Method: Composition-based stats. Identities = 49/224 (21%), Positives = 95/224 (42%), Gaps = 24/224 (10%) Query: 18 IRVGFVGLNAAKGWAIKTHYPAILQLSSQFQITALYSPKIETSIATIQRLKLSNATAFPT 77 I+VG +G + + +L + ++QI+ KI TS + +A Sbjct: 6 IKVGILGYG----LSGSVFHGPLLDVLDEYQIS-----KIMTSRTEEVKRDFPDAEVVHE 56 Query: 78 LESFASSSTIDMIVIAIQVASHYEVVMPLLEFSKNNPNLKYLFVEWALACSLDQAESIYK 137 LE + I+++++ HYE M ++ K ++ +E + + ++ E++ + Sbjct: 57 LEEITNDPAIELVIVTTPSGLHYEHTMACIQAGK------HVVMEKPMTATAEEGETLKR 110 Query: 138 AAAERGVQTIISLQGRKSPYILRAKELISQGYIGDINSIEIAGNGGWYGYERPVKSPKYI 197 AA E+GV + R L K+LIS+G + DIN+ +++ Y RP ++ Sbjct: 111 AADEKGVLLSVYHNRRWDNDFLTIKKLISEGSLEDINTYQVS-----YNRYRPEVQARWR 165 Query: 198 YEIGNGVDLVTTTFGHTIDILQYMTSSYFSRINAMVFNNIPEQE 241 + G + H ID T F A+ N + ++E Sbjct: 166 EKEGTATGTLYDLGSHIID----QTLHLFGMPKAVTANVMAQRE 205 >3I23-A nrPDB Length = 349 Score = 190 bits (482), Expect = 1e-48, Method: Composition-based stats. Identities = 73/356 (20%), Positives = 132/356 (37%), Gaps = 60/356 (16%) Query: 18 IRVGFVGLNAAKGWAIKTHYPAILQLSSQFQITALYSPKIETSIATIQRLKLSNATAFPT 77 +++GF+G + A + H P ++ + ++ ++ + A + K N TA Sbjct: 3 VKMGFIGFGKS---ANRYHLPYVM-IRETLEVKTIFDLHVNEKAAAPFKEKGVNFTA--D 56 Query: 78 LESFASSSTIDMIVIAIQVASHYEVVMPLLEFSKNNPNLKYLFVEWALACSLDQAESIYK 137 L + I++I I +HY++ + K+ + VE +L+ AE ++ Sbjct: 57 LNELLTDPEIELITICTPAHTHYDLAKQAILAGKS------VIVEKPFCDTLEHAEELFA 110 Query: 138 AAAERGVQTIISLQGRKSPYILRAKELISQGYIGDINSIEIAGNGGWYGYERPVKSPKYI 197 E+GV + R L K+++ QG++G+IN +E Y RP + Sbjct: 111 LGQEKGVVVMPYQNRRFDGDYLAMKQVVEQGFLGEINEVE-----THIDYYRPGSITEQG 165 Query: 198 YEIGNGVDLVTTTFGHTIDILQYMTSSYFSRINAMVFNNIPEQELIDERGNRLGQRVPKT 257 + H +D + + F R + + + D R N + + V Sbjct: 166 PKEN---GSFYGLGIHLMDRM----IALFGRPDQVTY---------DIRNNEVSEAVDNY 209 Query: 258 VPDHLLFQGTLLNGNVPVSCSFKGGKPTKKFTKNLVIDIHGTKG------------DLK- 304 L + L V V + P +F +HG+ G DLK Sbjct: 210 FDVDLHYGSKL---KVKVKTNHSVASPYPRFI------VHGSNGSFIKYGEDQQENDLKA 260 Query: 305 -LEGDA-GFAEISNLVLYYSGTRANDFPLANGQQAPLDPGYDAGKEIMEVYH-LRN 357 + DA GF E S +YY + ++ P D G+ VY L+N Sbjct: 261 GIMPDAPGFGEDSP--MYYGEVTYRNGNGDWIKKQIKTPVGDYGRYYDAVYETLKN 314 >3F4L-A nrPDB Length = 345 Score = 189 bits (479), Expect = 2e-48, Method: Composition-based stats. Identities = 44/221 (19%), Positives = 79/221 (35%), Gaps = 28/221 (12%) Query: 18 IRVGFVGLNAAKGWAIKTHYPAILQLSSQFQITALYSP--KIETSIATIQRLKLSNATAF 75 I F+G + + H P +L + + ++ K E + ++ Sbjct: 3 INCAFIGFGKS---TTRYHLPYVLNRKDSWHVAHIFRRHAKPEEQAPIYSHIHFTS---- 55 Query: 76 PTLESFASSSTIDMIVIAIQVASHYEVVMPLLEFSKNNPNLKYLFVEWALACSLDQAESI 135 L+ + + ++V+ SH+E LE KN + VE +L QA+ + Sbjct: 56 -DLDEVLNDPDVKLVVVCTHADSHFEYAKRALEAGKN------VLVEKPFTPTLAQAKEL 108 Query: 136 YKAAAERGVQTIISLQGRKSPYILRAKELISQGYIGDINSIEIAGNGGWYGYERPVKSPK 195 + A +G+ R L AK+ I G +G+I +E + Y RPV K Sbjct: 109 FALAKSKGLTVTPYQNRRFDSCFLTAKKAIESGKLGEIVEVE-----SHFDYYRPVAETK 163 Query: 196 YIYEIGNGVDLVTTTFGHTIDILQYMTSSYFSRINAMVFNN 236 HT+D S F R + + ++ Sbjct: 164 PGLPQD---GAFYGLGVHTMD----QIISLFGRPDHVAYDI 197 >3HNP-A nrPDB Length = 353 Score = 187 bits (475), Expect = 8e-48, Method: Composition-based stats. Identities = 43/219 (19%), Positives = 86/219 (39%), Gaps = 24/219 (10%) Query: 18 IRVGFVGLNAAKGWAIKTHYPAILQLSSQFQITALYSPKIETSIATIQRLKLSNATAFPT 77 + +GF+G + A + H P L+ + ++ ++ +I +A + T Sbjct: 3 LTMGFIGFGKS---ANRYHLPY-LKTRNNIKVKTIFVRQINEELAAPYEERGVYFT--TD 56 Query: 78 LESFASSSTIDMIVIAIQVASHYEVVMPLLEFSKNNPNLKYLFVEWALACSLDQAESIYK 137 L+ + I ++ I +HYE+ ++ K+ + VE +++ A+ + Sbjct: 57 LDELLNDKEIQVVTICTPAHTHYELAKKVILAGKS------VIVEKPFCDTVEHAKELLA 110 Query: 138 AAAERGVQTIISLQGRKSPYILRAKELISQGYIGDINSIEIAGNGGWYGYERPVKSPKYI 197 E+GV + R L K+++ QG++GDI IE Y RP Sbjct: 111 LGREKGVVVMPYQNRRFDGDFLAVKQVVEQGFLGDIIEIE-----SHIDYFRPGSITHEA 165 Query: 198 YEIGNGVDLVTTTFGHTIDILQYMTSSYFSRINAMVFNN 236 + + HT+D + S F R N + ++ Sbjct: 166 PKEE---GSFYSLGIHTMDRM----ISLFGRPNTVTYDI 197 >3RC7-A nrPDB Length = 350 Score = 169 bits (427), Expect = 3e-42, Method: Composition-based stats. Identities = 43/190 (22%), Positives = 77/190 (40%), Gaps = 17/190 (8%) Query: 14 NAAPIRVGFVGLNAAKGWAIKTHYPAILQLSSQFQITALYSPKIETSIATIQRLKLSNAT 73 NA PIRVG +G A W + PA L+ ++TA+ S + + + +R Sbjct: 24 NANPIRVGVIGC-ADIAW--RRALPA-LEAEPLTEVTAIASRRWDRAKRFTERFGGEPVE 79 Query: 74 AFPTLESFASSSTIDMIVIAIQVASHYEVVMPLLEFSKNNPNLKYLFVEWALACSLDQAE 133 +P L +D + + + H E + L K ++ E L QAE Sbjct: 80 GYPAL---LERDDVDAVYVPLPAVLHAEWIDRALRAGK------HVLAEKPLTTDRPQAE 130 Query: 134 SIYKAAAERGVQTIISLQGRKSPYILRAKELISQGYIGDINSIEIAGNGGWYGYERPVKS 193 ++ A ERG+ + + P + +++ +G IG+I S + +P Sbjct: 131 RLFAVARERGLLLMENFMFLHHPQHRQVADMLDEGVIGEIRSFAASFTIPP----KPQGD 186 Query: 194 PKYIYEIGNG 203 +Y ++G G Sbjct: 187 IRYQADVGGG 196 >1ZH8-A nrPDB Length = 340 Score = 152 bits (383), Expect = 3e-37, Method: Composition-based stats. Identities = 51/271 (18%), Positives = 104/271 (38%), Gaps = 25/271 (9%) Query: 16 APIRVGFVGLNAAKGWAIKTHYPAILQLSSQFQITALYSPKIETSIATIQRLKLSNATAF 75 IR+G VG A A + H PA+ LS F+ITA+ S + + ++ + N F Sbjct: 17 RKIRLGIVGCGIA---ARELHLPALKNLSHLFEITAVTS-RTRSHAEEFAKM-VGNPAVF 71 Query: 76 PTLESFASSSTIDMIVIAIQVASHYEVVMPLLEFSKNNPNLKYLFVEWALACSLDQAESI 135 + E S +D + + + V E+ +P +E K ++ E ++ ++ + + Sbjct: 72 DSYEELLESGLVDAVDLTLPV----ELNLPFIE--KALRKGVHVICEKPISTDVETGKKV 125 Query: 136 YKAAAERGVQTIISLQGRKSPYILRAKELISQGYIGD--INSIEIAGNGGWYGYERPVKS 193 + + + I+ R P +AKEL+ G IGD + +I Sbjct: 126 VELSEKSEKTVYIAENFRHVPAFWKAKELVESGAIGDPVFMNWQIWVGMDENNKY---VH 182 Query: 194 PKYIYEIGNGVDLVTTTFGHTIDILQYMTSSYFSRINAMVFNNIPEQELID--------E 245 + + + ++ H ++ + I+A+ + P +D E Sbjct: 183 TDWRKKPKHVGGFLSDGGVHHAAAMRLILGEI-EWISAVAKDLSPLLGGMDFLSSIFEFE 241 Query: 246 RGNRLGQRVPKTVPDHLLFQGTLLNGNVPVS 276 G + ++ + F+ T G + +S Sbjct: 242 NGTVGNYTISYSLKGNERFEITGTKGKISIS 272 >2GLX-A nrPDB Length = 332 Score = 87.5 bits (215), Expect = 1e-17, Method: Composition-based stats. Identities = 38/203 (18%), Positives = 71/203 (34%), Gaps = 17/203 (8%) Query: 19 RVGFVGLNAAKGWAIKTHYPAILQLSSQFQITALYSPKIETSIATIQRLKLSNATAFPTL 78 R G +G A A + AI ++ ++ S E A + + ++ Sbjct: 2 RWGLIG---ASTIAREWVIGAIRATGG--EVVSMMSTSAERGAAYATENGIGKS--VTSV 54 Query: 79 ESFASSSTIDMIVIAIQVASHYEVVMPLLEFSKNNPNLKYLFVEWALACSLDQAESIYKA 138 E +D + ++ H E + + K ++ E LA +L+ A + A Sbjct: 55 EELVGDPDVDAVYVSTTNELHREQTLAAIRAGK------HVLCEKPLAMTLEDAREMVVA 108 Query: 139 AAERGVQTIISLQGRKSPYILRAKELISQGYIGDINSIEIAGNGGWYGYERPVKSPKYIY 198 A E GV + R + ++ I++G IG IA Y P + Sbjct: 109 AREAGVVLGTNHHLRNAAAHRAMRDAIAEGRIGR----PIAARVFHAVYLPPHLQGWRLE 164 Query: 199 EIGNGVDLVTTTFGHTIDILQYM 221 G ++ H D L+++ Sbjct: 165 RPEAGGGVILDITVHDADTLRFV 187 >3EZY-A nrPDB Length = 344 Score = 79.4 bits (194), Expect = 3e-15, Method: Composition-based stats. Identities = 24/154 (15%), Positives = 55/154 (35%), Gaps = 13/154 (8%) Query: 18 IRVGFVGLNAAKGWAIKTHYPAILQLSSQFQITALYSPKIETSIATIQRLKLSNATAFPT 77 +R+G +GL H + + + A+ + + ++L + A + Sbjct: 3 LRIGVIGLGR----IGTIHAENLKMIDDAI-LYAISDVREDRLREMKEKLGVEKA--YKD 55 Query: 78 LESFASSSTIDMIVIAIQVASHYEVVMPLLEFSKNNPNLKYLFVEWALACSLDQAESIYK 137 +D +++ +H E+V+ + K ++F E L+ +L + + + Sbjct: 56 PHELIEDPNVDAVLVCSSTNTHSELVIACAKAKK------HVFCEKPLSLNLADVDRMIE 109 Query: 138 AAAERGVQTIISLQGRKSPYILRAKELISQGYIG 171 + V R + KE + G IG Sbjct: 110 ETKKADVILFTGFNRRFDRNFKKLKEAVENGTIG 143 >3EC7-A nrPDB Length = 357 Score = 79.0 bits (193), Expect = 4e-15, Method: Composition-based stats. Identities = 35/214 (16%), Positives = 77/214 (35%), Gaps = 24/214 (11%) Query: 18 IRVGFVGLNAAKGWAIKTHYPAILQLSSQFQITALYSPKIETSIATIQRLKLSNATAFPT 77 ++ G VG+ H + S ++ A+ + A + + + A + Sbjct: 24 LKAGIVGIG----MIGSDHLRRLANTVSGVEVVAVCDIVAGRAQAALDKYAIE-AKDYND 78 Query: 78 LESFASSSTIDMIVIAIQVASHYEVVMPLLEFSKNNPNLKYLFVEWALACSLDQAESIYK 137 + +++++I +H +V + L +K Y+F E LA + + + + Sbjct: 79 YHDLINDKDVEVVIITASNEAHADVAVAALNANK------YVFCEKPLAVTAADCQRVIE 132 Query: 138 AAAERGV-QTIISLQGRKSPYILRAKELISQGYIGDINSIEIAGNGGWYGYERPVKSPKY 196 A + G I R ++ K +I G IG + +G Y S Sbjct: 133 AEQKNGKRMVQIGFMRRYDKGYVQLKNIIDSGEIGQ----PLMVHGRHYN-----ASTVP 183 Query: 197 IYEIGNGVDLVTTTFGHTIDILQYMTSSYFSRIN 230 Y+ + T H ID++ ++ + + + Sbjct: 184 EYKTPQA---IYETLIHEIDVMHWLLNEDYKTVK 214 >3NT2-A nrPDB Length = 344 Score = 78.6 bits (192), Expect = 5e-15, Method: Composition-based stats. Identities = 51/272 (18%), Positives = 103/272 (37%), Gaps = 51/272 (18%) Query: 18 IRVGFVGLNAAKGWAIKTHYPAILQLSSQFQITALYSPKIETSIATIQRLKLSNATAFPT 77 +R+G +G A K H I S +I A+ E + +++ +L NAT +P Sbjct: 3 LRIGVIGTGA----IGKEHINRITNKLSGAEIVAVTDVNQEAAQKVVEQYQL-NATVYPN 57 Query: 78 LESFASSSTIDMIVIAIQVASHYEVVMPLLEFSKNNPNLKYLFVEWALACSLDQAESIYK 137 +S + +D +++ +H V+ ++ K Y+F E LA + + I + Sbjct: 58 DDSLLADENVDAVLVTSWGPAHESSVLKAIKAQK------YVFCEKPLATTAEGCMRIVE 111 Query: 138 AAAERGVQTI-ISLQGRKSPYILRAKELISQGYIGDINSIEIAGNGGWYGYERPVKSPKY 196 + G + + + R ++ KE + IG+ I + P Y Sbjct: 112 EEIKVGKRLVQVGFMRRYDSGYVQLKEALDNHVIGEPLMI-------HCAHRNPTVGDNY 164 Query: 197 IYEIGNGVDLVTTTFGHTIDILQYMTSSYFSRI---------NAMVFNNIPEQELIDERG 247 ++ V T H ID+L ++ + + + NA+ P+ +I+ +G Sbjct: 165 TTDMA-----VVDTLVHEIDVLHWLVNDDYESVQVIYPKKSKNALPHLKDPQIVVIETKG 219 Query: 248 NRLGQRVPKTVPDHLLFQGTLLNGNVPVSCSF 279 G ++N + V+C + Sbjct: 220 ------------------GIVINAEIYVNCKY 233 >2Q4E-A nrPDB Length = 362 Score = 76.3 bits (186), Expect = 2e-14, Method: Composition-based stats. Identities = 31/163 (19%), Positives = 62/163 (38%), Gaps = 15/163 (9%) Query: 18 IRVGFVGLN-AAKGWAIKTHYPAILQLSSQFQITALYSPKIETSIATIQRLKLSNATAFP 76 IR+G +G A+ + H + I+ + S +E + A +T Sbjct: 7 IRIGVMGCADIARKVSRAIHL------APNATISGVASRSLEKAKAFATANNYPESTKIH 60 Query: 77 -TLESFASSSTIDMIVIAIQVASHYEVVMPLLEFSKNNPNLKYLFVEWALACSLDQAESI 135 + ES ID + + + + H E + E K ++ +E +A ++ + + I Sbjct: 61 GSYESLLEDPEIDALYVPLPTSLHVEWAIKAAEKGK------HILLEKPVAMNVTEFDKI 114 Query: 136 YKAAAERGVQTIISLQGRKSPYILRAKELISQG-YIGDINSIE 177 A GVQ + +P KE +S G + +++ Sbjct: 115 VDACEANGVQIMDGTMWVHNPRTALLKEFLSDSERFGQLKTVQ 157 >2O4U-X nrPDB Length = 334 Score = 76.3 bits (186), Expect = 2e-14, Method: Composition-based stats. Identities = 30/159 (18%), Positives = 64/159 (40%), Gaps = 15/159 (9%) Query: 18 IRVGFVGLNAAKGWAIKTHYPAILQL--SSQFQITALYSPKIETSIATIQRLKLSNATAF 75 +R G V + I + + A+LQ S+ Q+ A+ + + + Q+ + A + Sbjct: 3 LRWGIVSVGL-----ISSDFTAVLQTLPRSEHQVVAVAARDLSRAKEFAQKHDIPKA--Y 55 Query: 76 PTLESFASSSTIDMIVIAIQVASHYEVVMPLLEFSKNNPNLKYLFVEWALACSLDQAESI 135 + E A +++ + Q H VM L K + E + + + + Sbjct: 56 GSYEELAKDPNVEVAYVGTQHPQHKAAVMLCLAAGKA------VLCEKPMGVNAAEVREM 109 Query: 136 YKAAAERGVQTIISLQGRKSPYILRAKELISQGYIGDIN 174 A RG+ + ++ R P + +++QG +GD+ Sbjct: 110 VTEARSRGLFLMEAIWTRFFPASEALRSVLAQGTLGDLR 148 >1EVJ-A nrPDB Length = 352 Score = 74.8 bits (182), Expect = 7e-14, Method: Composition-based stats. Identities = 37/232 (15%), Positives = 78/232 (33%), Gaps = 15/232 (6%) Query: 21 GFVGLNAAKGWAIKTHYPAILQLSSQFQITALYSPKIETSIATIQRLKLSNATAFP--TL 78 VGL +A+ P +I AL E + + + Sbjct: 6 AIVGLGK---YALNQILPGFAGCQHS-RIEALVDGNAEKAKIVAAEYGVDPRKIYDYSNF 61 Query: 79 ESFASSSTIDMIVIAIQVASHYEVVMPLLEFSKNNPNLKYLFVEWALACSLDQAESIYKA 138 + A ID + I + + H E + + K ++ E +A S+ + + A Sbjct: 62 DKIAKDPKIDAVYIILPNSLHAEFAIRAFKAGK------HVMCEKPMATSVADCQRMIDA 115 Query: 139 AAERGVQTIISLQGRKSPYILRAKELISQGYIGDINSIEIAGNGGWYGYERPVKSPKYIY 198 A + +I + P A +LI + +G + + N P + + Sbjct: 116 AKAANKKLMIGYRCHYDPMNRAAVKLIRENQLGKLGMV-TTDNSDVMDQNDPAQQWRLRR 174 Query: 199 EIGNGVDLVTTTFGHTIDILQYMTSSYFSRINAMVFNNIPEQELIDERGNRL 250 E+ G + + ++ +Y+ + A +++ P E E +R+ Sbjct: 175 ELAGG-GSLMDIGIYGLNGTRYLLGEEPIEVRAYTYSD-PNDERFVEVEDRI 224 >4KOA-A nrPDB Length = 333 Score = 74.8 bits (182), Expect = 7e-14, Method: Composition-based stats. Identities = 39/204 (19%), Positives = 71/204 (34%), Gaps = 17/204 (8%) Query: 18 IRVGFVGLNAAKGWAIKTHYPAILQLSSQFQITALYSPKIETSIATIQRLKLSNATAFPT 77 IR G +G A A + AI ++ ++ S E A + A A + Sbjct: 2 IRWGLIG---ASTIAREWVIGAIRAAGG--EVVSVMSSSAERGEAYAAENGI--AKAVTS 54 Query: 78 LESFASSSTIDMIVIAIQVASHYEVVMPLLEFSKNNPNLKYLFVEWALACSLDQAESIYK 137 ++ +D + I+ H+ + + K ++ E LA +L+ + Sbjct: 55 VDDLVGDPDVDAVYISTTNELHHGQALAAIRAGK------HVLCEKPLAMNLNDGCEMVL 108 Query: 138 AAAERGVQTIISLQGRKSPYILRAKELISQGYIGDINSIEIAGNGGWYGYERPVKSPKYI 197 A E GV + R + +E I+ G IG IA Y P + Sbjct: 109 KACEAGVVLGTNHHLRNAATHRAMREAIAAGRIGR----PIAARVFHAVYLPPHLQGWRL 164 Query: 198 YEIGNGVDLVTTTFGHTIDILQYM 221 + G ++ H D L+++ Sbjct: 165 DKPEAGGGVILDITVHDADTLRFV 188 >4MIE-A nrPDB Length = 351 Score = 74.8 bits (182), Expect = 7e-14, Method: Composition-based stats. Identities = 42/205 (20%), Positives = 79/205 (38%), Gaps = 24/205 (11%) Query: 18 IRVGFVGLNAAKGWAIKTHYPAILQLSSQFQITALYSPKIETSIATIQRLKLSNATAFPT 77 ++VG +G A + H + + + ++ A+ E + A ++ L NA +P Sbjct: 15 VKVGVIGTGA----MGRAHIDRLTNVLTGAEVVAVTDIDHEAAEAAVRDFHL-NAKVYPD 69 Query: 78 LESFASSSTIDMIVIAIQVASHYEVVMPLLEFSKNNPNLKYLFVEWALACSLDQAESIYK 137 S ID + + +H V+ L+ K ++F E LA +L+ A+ I Sbjct: 70 DTSLLQDPDIDAVFVVSFGGAHEATVLKALDTDK------FIFTEKPLATTLEGAKRIVD 123 Query: 138 AAAERGVQTI-ISLQGRKSPYILRAKELISQGYIGDINSIEIAGNGGWYGYERPVKSPKY 196 + + I + R I KE + G IG + + + P + Y Sbjct: 124 KELTKSKKVIQVGFMRRYDQGIRALKEKLDTGIIGAPLVVRAS-------HINPNVASNY 176 Query: 197 IYEIGNGVDLVTTTFGHTIDILQYM 221 E+ +T T H ID + ++ Sbjct: 177 SNEMA-----ITDTLIHEIDEMHWL 196 >3OQB-A nrPDB Length = 383 Score = 69.4 bits (168), Expect = 3e-12, Method: Composition-based stats. Identities = 34/186 (18%), Positives = 70/186 (37%), Gaps = 24/186 (12%) Query: 76 PTLESFASSSTIDMIVIAIQVASHYEVVMPLLEFSKNNPNLKYLFVEWALACSLDQAESI 135 L++ + M A + ++ + K +++ E +A + ++A + Sbjct: 73 TDLDAALADKNDTMFFDAATTQARPGLLTQAINAGK------HVYCEKPIATNFEEALEV 126 Query: 136 YKAAAERGVQTIISLQGRKSPYILRAKELISQGYIGDINSIEIA-----GNGGWYGYERP 190 K A +GV+ P + + L G+ G I S+ GGW +RP Sbjct: 127 VKLANSKGVKHGTVQDKLFLPGLKKIAFLRDSGFFGRILSVRGEFGYWVFEGGWQEAQRP 186 Query: 191 VKSPKYIYEIGNGVDLVTTTFGHTIDILQYMTSSYFSRINAMVF---NNIPEQELIDERG 247 + Y +G ++ H +Y+ + F + ++V +IPE+ DE+G Sbjct: 187 ----SWNYRDEDGGGIILDMVCH----WRYVLDNLFGNVQSVVCIGNTDIPERF--DEQG 236 Query: 248 NRLGQR 253 + Sbjct: 237 KKYKAT 242 >4EW6-A nrPDB Length = 330 Score = 68.2 bits (165), Expect = 6e-12, Method: Composition-based stats. Identities = 36/235 (15%), Positives = 82/235 (34%), Gaps = 22/235 (9%) Query: 14 NAAPIRVGFVGLNAAKGWAIKTHYPAILQLSSQFQITALYSPKIETSIATIQRLKLSNAT 73 + +PI + VG+ H P+I + ++ F++ A S + Sbjct: 22 SMSPINLAIVGVGK---IVRDQHLPSIAK-NANFKLVATASR----------HGTVEGVN 67 Query: 74 AFPTLESFAS-SSTIDMIVIAIQVASHYEVVMPLLEFSKNNPNLKYLFVEWALACSLDQA 132 ++ T+E+ +ID + + + YE L K ++F+E +L + Sbjct: 68 SYTTIEAMLDAEPSIDAVSLCMPPQYRYEAAYKALVAGK------HVFLEKPPGATLSEV 121 Query: 133 ESIYKAAAERGVQTIISLQGRKSPYILRAKELISQGYIGDINSIEIAGNGGWYGYERPVK 192 + A ++G S R +P + AK ++ I ++ I W+ + + Sbjct: 122 ADLEALANKQGASLFASWHSRYAPAVEAAKAFLASTTIKSVHVIWKEDVRHWHPNQDWIW 181 Query: 193 SPKYIYEIGNGVDLVTTTFGHTIDILQYMTSSYFSRINAMVFNNIPEQELIDERG 247 + G++ ++ H + ++T + + D G Sbjct: 182 QAGGLGVFDPGINALS-IVTHILPRPVFITGAVLEFPENRDAPIAADIHFRDADG 235 >4HKT-A nrPDB Length = 331 Score = 67.8 bits (164), Expect = 9e-12, Method: Composition-based stats. Identities = 21/135 (15%), Positives = 48/135 (35%), Gaps = 17/135 (12%) Query: 90 IVIAIQVASHYEVVMPLLEFSKNNPNLKYLFVEWALACSLDQAESIYKAAAERGVQTIIS 149 +VI +H +++ K +F E + ++ + K ++ + ++ Sbjct: 67 VVICTPTDTHADLIERFARAGKA------IFCEKPIDLDAERVRACLKVVSDTKAKLMVG 120 Query: 150 LQGRKSPYILRAKELISQGYIGDINSIEIAGNGGWYGYERPVKSP-KYIYEIGNGVDLVT 208 R P+ + ++ I G IG++ + I P P YI G + Sbjct: 121 FNRRFDPHFMAVRKAIDDGRIGEVEMVTITSRD-------PSAPPVDYIKRSG---GIFR 170 Query: 209 TTFGHTIDILQYMTS 223 H D+ +++ Sbjct: 171 DMTIHDFDMARFLLG 185 >3IP3-A nrPDB Length = 337 Score = 65.9 bits (159), Expect = 3e-11, Method: Composition-based stats. Identities = 34/197 (17%), Positives = 73/197 (37%), Gaps = 18/197 (9%) Query: 36 HYPAILQ-LSSQFQITALYSPKIETSIATIQRLKLS---NATAFPTLESFASSSTIDMIV 91 H+ L+ L + IT + E ++ +++ + D++V Sbjct: 13 HFRYALEGLDEECSITGIAPGVPEEDLSKLEKAISEMNIKPKKYNNWWEMLEKEKPDILV 72 Query: 92 IAIQVASHYEVVMPLLEFSKNNPNLKYLFVEWALACSLDQAESIYKAAAE--RGVQTIIS 149 I + + ++++ LE + FVE +A + + E I + V Sbjct: 73 INTVFSLNGKILLEALE------RKIHAFVEKPIATTFEDLEKIRSVYQKVRNEVFFTAM 126 Query: 150 LQGRKSPYILRAKELISQGYIGDINSIEIAGNGGWYGYERPVKSPKYIYEIGNGVDLVTT 209 R P+ L AK+L+S+G +G+I + + + + P + + + Sbjct: 127 FGIRYRPHFLTAKKLVSEGAVGEIRLVNTQKS------YKLGQRPDFYKKRETYGGTIPW 180 Query: 210 TFGHTIDILQYMTSSYF 226 H ID + ++T F Sbjct: 181 VGIHAIDWIHWITGKKF 197 >2IXB-A nrPDB Length = 444 Score = 62.8 bits (151), Expect = 2e-10, Method: Composition-based stats. Identities = 46/248 (18%), Positives = 93/248 (37%), Gaps = 30/248 (12%) Query: 14 NAAPIRVGFVGLNAAKGWAIKTHYPAILQLSSQFQITALYSPKI---ETSIATIQRLKLS 70 N +R+ F+ A G +TH + +I A P + +++ Sbjct: 17 NPKKVRIAFI----AVGLRGQTHVEN-MARRDDVEIVAFADPDPYMVGRAQEILKKNGKK 71 Query: 71 NATAF----PTLESFASSSTIDMIVIAIQVASHYEVVMPLLEFSKNNPNLKYLFVEWALA 126 A F ++ ID + ++ H+E + ++ K + +E + A Sbjct: 72 PAKVFGNGNDDYKNMLKDKNIDAVFVSSPWEWHHEHGVAAMKAGK------IVGMEVSGA 125 Query: 127 CSLDQAESIYKAAAERGVQTIISLQGRKSPYILRAKELISQGYIGDINSIEIAGNGGWYG 186 +L++ K + + GV + ++ ++ +G G++ + G GG+ Sbjct: 126 ITLEECWDYVKVSEQTGVPLMALENVCYRRDVMAILNMVRKGMFGEL----VHGTGGYQH 181 Query: 187 YERPVKSPKYIY-EIGNGVDLVTTTFGHTIDILQYMTSSYFSRINAM--VFNNIPEQELI 243 RPV I + G+GV+ F ++ T+ Y +R + P ++ Sbjct: 182 DLRPVLFNSGINGKNGDGVEFGEKAFSEA----KWRTNHYKNRNGELYPTHGVGPLHTMM 237 Query: 244 D-ERGNRL 250 D RGNRL Sbjct: 238 DINRGNRL 245 >6JNK-A nrPDB Length = 310 Score = 60.5 bits (145), Expect = 1e-09, Method: Composition-based stats. Identities = 29/157 (18%), Positives = 56/157 (35%), Gaps = 21/157 (13%) Query: 15 AAPIRVGFVGLNAAKGWAIKTHYPAILQLSSQFQITALYSPKIETSIATIQRLKLSNATA 74 + + +G VG+ A H PAI F++TA S E ++ Sbjct: 3 SDQVSLGVVGIGK---IARDQHLPAI-DAEPGFKLTACASRHAE----------VTGVRN 48 Query: 75 FPTLESFAS-SSTIDMIVIAIQVASHYEVVMPLLEFSKNNPNLKYLFVEWALACSLDQAE 133 + L + + +D + + Y LE K ++ +E +L + Sbjct: 49 YRDLRALLAAERELDAVSLCAPPQVRYAQARAALEAGK------HVMLEKPPGATLGEVA 102 Query: 134 SIYKAAAERGVQTIISLQGRKSPYILRAKELISQGYI 170 + A ERG+ + R + + A+E ++ I Sbjct: 103 VLEALARERGLTLFATWHSRCASAVEPAREWLATRAI 139 >5UIA-A nrPDB Length = 345 Score = 60.1 bits (144), Expect = 2e-09, Method: Composition-based stats. Identities = 50/293 (17%), Positives = 93/293 (31%), Gaps = 38/293 (12%) Query: 14 NAAPIRVGFVGLNAAKGWAIKTHYPAILQLSSQFQITALYSPKIETSIATIQRLKLSNAT 73 N ++ +G + H A + I A+ + + + Sbjct: 2 NMTELKGALIGCG--FFAVNQMH--AWKDVKGA-GIAAICDRDPKRLKLVGDQFGIERR- 55 Query: 74 AFPTLESFASSSTIDMIVIAIQVASHYEVVMPLLEFSKNNPNLKYLFVEWALACSLDQAE 133 + + + D + IA V SH +V + A SL A+ Sbjct: 56 -YGDAAALFADGGFDFVDIATTVQSHRALVEMAAAH------KVPAICQKPFAKSLSDAK 108 Query: 134 SIYKAAAERGVQTIISLQGRKSPYILRAKELISQGYIGDINSIEIAGNGGWYGYERPVKS 193 ++ + + ++ R I K ++ G IG+ G + Sbjct: 109 AMVRTCENADIPLMVHENFRWQTPIQAVKAVLESGAIGE----PFWGRFSFRSGFDVFSG 164 Query: 194 PKYIYEIGNGVDLVTTTFGHTIDILQYMTSSYFSRINAMVFNNIPEQELIDERGNRLGQR 253 Y+ E + + HT+DI +++ + + A P G+ Sbjct: 165 QPYLAEGERFI--IEDLGIHTLDIARFILGDV-ATLTARTKRVNP---------KIKGED 212 Query: 254 VPKTVPDHLLFQGTLLNGNVP-VSCSFKGGKPTKKFTKNLVIDIHGTKGDLKL 305 V + DH NG V S+ T+ F + L IDI GT+G ++L Sbjct: 213 VATILLDH-------QNGATSIVDVSYATKLGTEPFPETL-IDIDGTQGTIRL 257 >2H63-A nrPDB Length = 292 Score = 57.8 bits (138), Expect = 9e-09, Method: Composition-based stats. Identities = 18/90 (20%), Positives = 39/90 (43%), Gaps = 8/90 (8%) Query: 63 TIQRLKLSNATAFP--TLESFASSSTIDMIVIAIQVASHYEVVMPLLEFSKNNPNLKYLF 120 + R +L + +LE SS +++ I + +SH + + L K ++ Sbjct: 38 FVSRRELGSIDGVQQISLEDALSSQEVEVAYICSESSSHEDYIRQFLNAGK------HVL 91 Query: 121 VEWALACSLDQAESIYKAAAERGVQTIISL 150 VE+ + SL A+ +++ A ++G Sbjct: 92 VEYPMTLSLAAAQELWELAEQKGKVLHEEH 121 >3EUW-A nrPDB Length = 344 Score = 56.7 bits (135), Expect = 2e-08, Method: Composition-based stats. Identities = 29/204 (14%), Positives = 71/204 (34%), Gaps = 19/204 (9%) Query: 37 YPAILQLSSQFQITALYSPKIETSIATIQRLKLSNATAFPTLESFASSSTIDMIVIAIQV 96 + A + + ++ + P IE + + A A + + + ID IVI Sbjct: 19 HAANIAANPDLELVVIADPFIEGAQRLAEANG---AEAVASPDEVFARDDIDGIVIGSPT 75 Query: 97 ASHYEVVMPLLEFSKNNPNLKYLFVEWALACSLDQAESIYKAAAERGVQTIISLQGRKSP 156 ++H +++ +E E + ++ + + + + ++ R P Sbjct: 76 STHVDLITRAVERG------IPALCEKPIDLDIEMVRACKEKIGDGASKVMLGFNRRFDP 129 Query: 157 YILRAKELISQGYIGDINSIEIAGNGGWYGYERPVKSPKYIYEIGNGVDLVTTTFGHTID 216 ++ IG++ + I P +PK Y G+G + H +D Sbjct: 130 SFAAINARVANQEIGNLEQLVIISRD-------PAPAPK-DYIAGSG-GIFRDMTIHDLD 180 Query: 217 ILQYMTSSYFSRINAMVFNNIPEQ 240 + ++ + + A N ++ Sbjct: 181 MARFFVPNIVE-VTATGANVFSQE 203 >1LC0-A nrPDB Length = 294 Score = 56.3 bits (134), Expect = 2e-08, Method: Composition-based stats. Identities = 17/74 (22%), Positives = 34/74 (45%), Gaps = 6/74 (8%) Query: 77 TLESFASSSTIDMIVIAIQVASHYEVVMPLLEFSKNNPNLKYLFVEWALACSLDQAESIY 136 +LE S ID+ I + +SH + + L+ K ++ VE+ + S A+ ++ Sbjct: 56 SLEDALRSQEIDVAYICSESSSHEDYIRQFLQAGK------HVLVEYPMTLSFAAAQELW 109 Query: 137 KAAAERGVQTIISL 150 + AA++G Sbjct: 110 ELAAQKGRVLHEEH 123 >3OA2-A nrPDB Length = 318 Score = 51.3 bits (121), Expect = 8e-07, Method: Composition-based stats. Identities = 21/143 (14%), Positives = 43/143 (30%), Gaps = 16/143 (11%) Query: 86 TIDMIVIAIQVASHYEVVMPLLEFSKNNPNLKYLFVEWALACSLDQAESIYKAAAERGVQ 145 +D + I HY + L + E L + + + + E + Sbjct: 73 ALDYVSICSPNYLHYPHIAAGLRLG------CDVICEKPLVPTPEMLDQLAVIERETDKR 126 Query: 146 TIISLQGRKSPYILRAKELISQGYIGDINSIE---IAGNGGWYGYERPVKSPKYIYEIGN 202 LQ R I+ K+ +++ ++ I G WY + + Sbjct: 127 LYNILQLRHHQAIIALKDKVAREKSPHKYEVDLTYITSRGNWY-------LKSWKGDPRK 179 Query: 203 GVDLVTTTFGHTIDILQYMTSSY 225 + T H D+L ++ Sbjct: 180 SFGVATNIGVHFYDMLHFIFGKL 202 >6D24-C nrPDB Length = 541 Score = 33.6 bits (75), Expect = 0.20, Method: Composition-based stats. Identities = 30/171 (17%), Positives = 54/171 (31%), Gaps = 19/171 (11%) Query: 111 KNNPNLKYLFVEWALACSLDQAESIYKAAAERGVQTIISLQGR--KSPYILRAKELISQG 168 K L VE + +E + Q R KE++ Sbjct: 191 KPELGWVRLIVEKPFGRDTETSEQLSN-------QLKPLFNERQVFRIDHYLGKEMVQ-- 241 Query: 169 YIGDINSIEIAG---NGGWYGYERPVKSPKYIYEIGN-GVDLVTTTFGHTIDILQYMTSS 224 +I A + W + +IG G + G D++Q + Sbjct: 242 ---NIIVTRFANRVFSALWNSNSIACVQITFKEKIGTEGRGGYFDSIGIIRDVIQNHLTQ 298 Query: 225 YFSRINAMVFNNIPEQELIDERGNRLGQRVPKTVPDHLLFQGTL-LNGNVP 274 S + ++ +++ DE+ L Q VP + +L Q T +G+ P Sbjct: 299 ILSLLTMEKPRSLSAEDIRDEKVQVLRQVVPANPAECVLGQYTASADGSTP 349 >4RAX-A nrPDB Length = 252 Score = 30.9 bits (68), Expect = 1.3, Method: Composition-based stats. Identities = 45/191 (23%), Positives = 71/191 (37%), Gaps = 24/191 (12%) Query: 145 QTIISLQGRKSPYILRAKELISQGYIGDINSIEIAGNGGWYGYERPVKSPKYIYEIGNGV 204 Q L + PY L + ISQ DI + +I G+ G P + E+ NG Sbjct: 41 QAYEELSQQFDPYPLAM-QFISQYSPEDIVTAQIEGSSGALWRISPPSRAQMKQELYNGT 99 Query: 205 DLVTTTFGHTI--DILQYMTSSYFSRINA--MVFNNIPEQELIDERGNRLGQRVPKTVPD 260 +T F D+ + T Y + + + N+ ++L R Q V +P Sbjct: 100 ADITLRFTWNFQRDLAKGGTVEYTNEKHTLELAPNSTARRQLAQLLEGRPDQSV--VIPH 157 Query: 261 HLLFQGTLLNGNVPVSCSFKGGKPTKKFTKNLVIDIHGTKGDLKLE--GDAGFAEISNLV 318 LF + N P + P K+ + D G + L+ E G E + Sbjct: 158 --LFPKYIRAPNGPEA------NPVKQLQPDEEEDYLGVRIQLRREQVGTGASGEQA--- 206 Query: 319 LYYSGTRANDF 329 GT+A+DF Sbjct: 207 ----GTKASDF 213 >6IGZ-6 nrPDB Length = 267 Score = 30.9 bits (68), Expect = 1.3, Method: Composition-based stats. Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 6/37 (16%) Query: 250 LGQRVPKTV--PDHLLFQGTLLNGNVPVSCSFKGGKP 284 LG V T PDH+ FQG ++P C F+G P Sbjct: 235 LGGAVKPTCQIPDHVAFQGI----DIPTPCFFEGFWP 267 >2EGZ-A nrPDB Length = 219 Score = 30.9 bits (68), Expect = 1.3, Method: Composition-based stats. Identities = 37/178 (20%), Positives = 59/178 (33%), Gaps = 15/178 (8%) Query: 78 LESFASSSTIDMIVIAIQVASHYEVVMPLLEFSKNNPNLKYLFVEWALACSLDQAESIYK 137 LE S ++ I EV F + +P Y +E S +Y Sbjct: 46 LEEVHSQGLKTILTIRSPEEGGREVKNREELFEELSPLSDYTDIE---LSSRGLLVKLYN 102 Query: 138 AAAERGVQTII-SLQGRKSPYILRAKELISQGY-IGDINSIEIAGNGGWYGYERPVKSPK 195 E G + II +P +E++ +GY G I I + N V Sbjct: 103 ITKEAGKKLIISYHNFELTPPNWIIREVLREGYRYGGIPKIAVKANS-----YEDVARLL 157 Query: 196 YIYEIGNGVDLVTTTF--GHTIDILQYMTSS---YFSRINAMVFNNIPEQELIDERGN 248 I G ++ + G + Y+ S Y S A IP +E+++ R Sbjct: 158 CISRQVEGEKILISMGDYGKISRLAGYVFGSVITYCSLEKAFAPGQIPLEEMVELRKK 215 >6E07-L nrPDB Length = 515 Score = 30.5 bits (67), Expect = 1.5, Method: Composition-based stats. Identities = 18/126 (14%), Positives = 39/126 (30%), Gaps = 11/126 (8%) Query: 17 PIRVGFVGLNAAKGWAIKTHYPAILQLSSQFQITALYSPKIET--SIATIQRLKLSNATA 74 P VG ++ Q F+ T K+E + + + +A + Sbjct: 62 PENTFIVGYARSRLTVADIR----KQSEPFFKATPEEKLKLEDFFARNSYVAGQYDDAAS 117 Query: 75 FPTLESFAS-----SSTIDMIVIAIQVASHYEVVMPLLEFSKNNPNLKYLFVEWALACSL 129 + L S + S + +A+ + V + E + + VE L Sbjct: 118 YQRLNSHMNALHLGSQANRLFYLALPPTVYEAVTKNIHESCMSQIGWNRIIVEKPFGRDL 177 Query: 130 DQAESI 135 ++ + Sbjct: 178 QSSDRL 183 >2Q49-A nrPDB Length = 359 Score = 29.7 bits (65), Expect = 2.7, Method: Composition-based stats. Identities = 26/107 (24%), Positives = 42/107 (39%), Gaps = 7/107 (6%) Query: 7 SSVSTVPNAAPIRVGFVGLNAAKGWAIKTHYPAILQLSSQFQITALYSPKIETSIATIQR 66 S+ S+V IR+G +G + G I +L FQ+T + + + Sbjct: 6 SASSSVKPEKDIRIGLLGASGYTGAEIVR----LLANHPHFQVTLMTADRKAGQSMESVF 61 Query: 67 LKLSNATAFPTLESF--ASSSTIDMIVIAIQVASHYEVVMPLLEFSK 111 L A PTL S A ST+D + + + E++ L K Sbjct: 62 PHL-RAQKLPTLVSVKDADFSTVDAVFCCLPHGTTQEIIKELPTALK 107 >4V6H-A nrPDB Length = 484 Score = 29.3 bits (64), Expect = 3.0, Method: Composition-based stats. Identities = 12/54 (22%), Positives = 21/54 (38%), Gaps = 1/54 (1%) Query: 133 ESIYKAAAERGVQTIISLQGRKSPYILRAKELISQGYIGDINSIEIAGNGGWYG 186 E + + A + L R + R E + G +G IN+ I+ +G Sbjct: 403 EELVRLANDTEFGLAAYLYSRDIGRVWRVAEALEYGMVG-INTGLISNEVAPFG 455 >3OT7-A nrPDB Length = 205 Score = 28.2 bits (61), Expect = 7.6, Method: Composition-based stats. Identities = 11/37 (29%), Positives = 23/37 (62%), Gaps = 2/37 (5%) Query: 339 LDPGYDAGKEIMEVYHLRNYNAIVGNIHRLYQSISDF 375 L+P +D K+ ME++H +++ V N + +S+ +F Sbjct: 14 LEPHFD--KQTMEIHHTKHHQTYVNNANAALESLPEF 48 >2QC3-A nrPDB Length = 303 Score = 27.8 bits (60), Expect = 10.0, Method: Composition-based stats. Identities = 8/56 (14%), Positives = 21/56 (37%) Query: 67 LKLSNATAFPTLESFASSSTIDMIVIAIQVASHYEVVMPLLEFSKNNPNLKYLFVE 122 L L+ + E ++ +++A + +H E+ + K+ + E Sbjct: 40 LDLARLGTTASTEEITDTAVAQPLIVAATLLAHQELARRCVLAGKDVIVAGHSVGE 95 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.310 0.129 0.336 Lambda K H 0.267 0.0391 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 15,594,452 Number of Sequences: 36641 Number of extensions: 623077 Number of successful extensions: 1627 Number of sequences better than 10.0: 39 Number of HSP's better than 10.0 without gapping: 37 Number of HSP's successfully gapped in prelim test: 21 Number of HSP's that attempted gapping in prelim test: 1550 Number of HSP's gapped (non-prelim): 60 length of query: 435 length of database: 10,336,785 effective HSP length: 100 effective length of query: 335 effective length of database: 6,672,685 effective search space: 2235349475 effective search space used: 2235349475 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.3 bits) S2: 60 (27.8 bits)