BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.


Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= P04037
         (155 letters)

Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 
           36,641 sequences; 10,336,785 total letters

Searching..................................................done


Results from round 1


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

6GIQ-d nrPDB                                                          324   9e-90
6HU9-d nrPDB                                                          272   5e-74
2ODX-A nrPDB                                                          169   6e-43
2Y69-F nrPDB                                                           57   5e-09
2OCC-F nrPDB                                                           56   6e-09
5Z62-F nrPDB                                                           55   8e-09
1YAK-A nrPDB                                                           30   0.53 
3GFO-A nrPDB                                                           29   1.1  
1Q3S-A nrPDB                                                           28   1.1  
6R5K-D nrPDB                                                           28   1.3  
3SI7-A nrPDB                                                           27   2.9  
4WZ6-A nrPDB                                                           27   3.0  
2PZF-A nrPDB                                                           27   3.3  
2W8P-A nrPDB                                                           27   3.9  
1PG5-A nrPDB                                                           27   4.9  
6GPK-A nrPDB                                                           26   5.9  
3RZZ-A nrPDB                                                           26   9.2  
5VXT-A nrPDB                                                           25   9.6  

>6GIQ-d nrPDB
          Length = 155

 Score =  324 bits (831), Expect = 9e-90,   Method: Compositional matrix adjust.
 Identities = 155/155 (100%), Positives = 155/155 (100%)

Query: 1   MLSLRQSIRFFKPATRTLCSSRYLLQQKPVVKTAQNLAEVNGPETLIGPGAKEGTVPTDL 60
           MLSLRQSIRFFKPATRTLCSSRYLLQQKPVVKTAQNLAEVNGPETLIGPGAKEGTVPTDL
Sbjct: 1   MLSLRQSIRFFKPATRTLCSSRYLLQQKPVVKTAQNLAEVNGPETLIGPGAKEGTVPTDL 60

Query: 61  DQETGLARLELLGKLEGIDVFDTKPLDSSRKGTMKDPIIIESYDDYRYVGCTGSPAGSHT 120
           DQETGLARLELLGKLEGIDVFDTKPLDSSRKGTMKDPIIIESYDDYRYVGCTGSPAGSHT
Sbjct: 61  DQETGLARLELLGKLEGIDVFDTKPLDSSRKGTMKDPIIIESYDDYRYVGCTGSPAGSHT 120

Query: 121 IMWLKPTVNEVARCWECGSVYKLNPVGVPNDDHHH 155
           IMWLKPTVNEVARCWECGSVYKLNPVGVPNDDHHH
Sbjct: 121 IMWLKPTVNEVARCWECGSVYKLNPVGVPNDDHHH 155


>6HU9-d nrPDB
          Length = 130

 Score =  272 bits (695), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 130/130 (100%), Positives = 130/130 (100%)

Query: 26  QQKPVVKTAQNLAEVNGPETLIGPGAKEGTVPTDLDQETGLARLELLGKLEGIDVFDTKP 85
           QQKPVVKTAQNLAEVNGPETLIGPGAKEGTVPTDLDQETGLARLELLGKLEGIDVFDTKP
Sbjct: 1   QQKPVVKTAQNLAEVNGPETLIGPGAKEGTVPTDLDQETGLARLELLGKLEGIDVFDTKP 60

Query: 86  LDSSRKGTMKDPIIIESYDDYRYVGCTGSPAGSHTIMWLKPTVNEVARCWECGSVYKLNP 145
           LDSSRKGTMKDPIIIESYDDYRYVGCTGSPAGSHTIMWLKPTVNEVARCWECGSVYKLNP
Sbjct: 61  LDSSRKGTMKDPIIIESYDDYRYVGCTGSPAGSHTIMWLKPTVNEVARCWECGSVYKLNP 120

Query: 146 VGVPNDDHHH 155
           VGVPNDDHHH
Sbjct: 121 VGVPNDDHHH 130


>2ODX-A nrPDB
          Length = 80

 Score =  169 bits (427), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 77/77 (100%), Positives = 77/77 (100%)

Query: 79  DVFDTKPLDSSRKGTMKDPIIIESYDDYRYVGCTGSPAGSHTIMWLKPTVNEVARCWECG 138
           DVFDTKPLDSSRKGTMKDPIIIESYDDYRYVGCTGSPAGSHTIMWLKPTVNEVARCWECG
Sbjct: 4   DVFDTKPLDSSRKGTMKDPIIIESYDDYRYVGCTGSPAGSHTIMWLKPTVNEVARCWECG 63

Query: 139 SVYKLNPVGVPNDDHHH 155
           SVYKLNPVGVPNDDHHH
Sbjct: 64  SVYKLNPVGVPNDDHHH 80


>2Y69-F nrPDB
          Length = 129

 Score = 56.6 bits (135), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 35/95 (36%), Positives = 49/95 (51%), Gaps = 2/95 (2%)

Query: 51  AKEGTVPTDLDQETGLARLELLGKLEGIDVFDTKPLDSSRKGTMKDPIIIESYDDYRYVG 110
           A  G VPTD +Q TGL R  +L   +G D ++     ++  GT +DP ++ S  + R VG
Sbjct: 32  ASGGGVPTDEEQATGLEREVMLAARKGQDPYNILAPKAT-SGTKEDPNLVPSITNKRIVG 90

Query: 111 CTGSPAGSHTIMWLKPTVNEVARCWECGSVYKLNP 145
           C      S T++W      E  RC  CG+ YKL P
Sbjct: 91  CICEEDNS-TVIWFWLHKGEAQRCPSCGTHYKLVP 124


>2OCC-F nrPDB
          Length = 98

 Score = 56.2 bits (134), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 35/95 (36%), Positives = 49/95 (51%), Gaps = 2/95 (2%)

Query: 51  AKEGTVPTDLDQETGLARLELLGKLEGIDVFDTKPLDSSRKGTMKDPIIIESYDDYRYVG 110
           A  G VPTD +Q TGL R  +L   +G D ++     ++  GT +DP ++ S  + R VG
Sbjct: 1   ASGGGVPTDEEQATGLEREVMLAARKGQDPYNILAPKAT-SGTKEDPNLVPSITNKRIVG 59

Query: 111 CTGSPAGSHTIMWLKPTVNEVARCWECGSVYKLNP 145
           C      S T++W      E  RC  CG+ YKL P
Sbjct: 60  CICEEDNS-TVIWFWLHKGEAQRCPSCGTHYKLVP 93


>5Z62-F nrPDB
          Length = 98

 Score = 55.5 bits (132), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 35/96 (36%), Positives = 51/96 (53%), Gaps = 4/96 (4%)

Query: 51  AKEGTVPTDLDQETGLARLELLGKLEGIDVFDT-KPLDSSRKGTMKDPIIIESYDDYRYV 109
           A  G VPTD +Q TGL R  +L   +G+D ++   P  +S  GT +DP ++ S  + R V
Sbjct: 1   ASGGGVPTDEEQATGLEREIMLAAKKGLDPYNVLAPKGAS--GTREDPNLVPSISNKRIV 58

Query: 110 GCTGSPAGSHTIMWLKPTVNEVARCWECGSVYKLNP 145
           GC      + +++W      E  RC  CG+ YKL P
Sbjct: 59  GCICEEDNT-SVVWFWLHKGEAQRCPRCGAHYKLVP 93


>1YAK-A nrPDB
          Length = 263

 Score = 29.6 bits (65), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 7/61 (11%)

Query: 76  EGIDVFDTKPLDSSR--KGTMKDPIIIESYDDYRYVGCTGSPAGSHTIMWLKPTVNEVAR 133
           E I+ FD    +S+   +  MK+  +I SY +Y++ G      G     W    + EV  
Sbjct: 201 EQINRFDELAENSTEEVRAKMKENFVISSYYEYQFWGMAYRKEG-----WSDSAIKEVEE 255

Query: 134 C 134
           C
Sbjct: 256 C 256


>3GFO-A nrPDB
          Length = 275

 Score = 28.9 bits (63), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 11/16 (68%), Positives = 13/16 (81%)

Query: 80 VFDTKPLDSSRKGTMK 95
          +FD KP+D SRKG MK
Sbjct: 66 LFDNKPIDYSRKGIMK 81


>1Q3S-A nrPDB
          Length = 548

 Score = 28.5 bits (62), Expect = 1.1,   Method: Composition-based stats.
 Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 10/50 (20%)

Query: 56  VPTDLDQETGLARLELLGKLE----------GIDVFDTKPLDSSRKGTMK 95
           +P  L +  GL  +E+L K+           GIDVF+ KP D   KG ++
Sbjct: 447 IPKTLAENAGLDTVEMLVKVISEHKNRGLGIGIDVFEGKPADMLEKGIIE 496


>6R5K-D nrPDB
          Length = 581

 Score = 28.5 bits (62), Expect = 1.3,   Method: Composition-based stats.
 Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 1/56 (1%)

Query: 34  AQNLAEVNGPETLIGPGAKEGTVPTDLDQETGLARLELLGKLEGIDVFDTKPLDSS 89
           A N +E+NG +  +G   K+      L ++    RLE + K +G+++F  K LD S
Sbjct: 282 ALNDSELNGEKLYVGRAQKKNERMHVLKKQYEAYRLEKMAKYQGVNLF-VKNLDDS 336


>3SI7-A nrPDB
          Length = 285

 Score = 27.3 bits (59), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 11/17 (64%), Positives = 14/17 (82%)

Query: 92  GTMKDPIIIESYDDYRY 108
           GT+K+ II  SYD+YRY
Sbjct: 113 GTIKENIIGVSYDEYRY 129


>4WZ6-A nrPDB
          Length = 290

 Score = 27.3 bits (59), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 11/17 (64%), Positives = 14/17 (82%)

Query: 92  GTMKDPIIIESYDDYRY 108
           GT+K+ II  SYD+YRY
Sbjct: 113 GTIKENIIGVSYDEYRY 129


>2PZF-A nrPDB
          Length = 228

 Score = 26.9 bits (58), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 11/17 (64%), Positives = 14/17 (82%)

Query: 92  GTMKDPIIIESYDDYRY 108
           GT+K+ II  SYD+YRY
Sbjct: 83  GTIKENIIGVSYDEYRY 99


>2W8P-A nrPDB
          Length = 487

 Score = 26.9 bits (58), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 15/62 (24%), Positives = 28/62 (45%)

Query: 9   RFFKPATRTLCSSRYLLQQKPVVKTAQNLAEVNGPETLIGPGAKEGTVPTDLDQETGLAR 68
           +F       +CS+++L+Q+       +  AE       +G G +EGT    L  E  + +
Sbjct: 284 KFRNTGQTAVCSNQFLVQRGIHDAFVKAFAEAMKKNLRVGNGFEEGTTQGPLINEKAVEK 343

Query: 69  LE 70
           +E
Sbjct: 344 VE 345


>1PG5-A nrPDB
          Length = 299

 Score = 26.6 bits (57), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 5/39 (12%)

Query: 7  SIRFFKPATRTLCSSRYLLQQKPVVKTAQNLAEVNGPET 45
          SI FF+P+TRT     YL  QK ++    ++   +G E+
Sbjct: 42 SIAFFEPSTRT-----YLSFQKAIINLGGDVIGFSGEES 75


>6GPK-A nrPDB
          Length = 373

 Score = 26.2 bits (56), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 11/22 (50%), Positives = 13/22 (59%)

Query: 120 TIMWLKPTVNEVARCWECGSVY 141
           TI+W     NEV RC E G V+
Sbjct: 296 TIVWEGKNENEVGRCKETGKVH 317


>3RZZ-A nrPDB
          Length = 446

 Score = 25.8 bits (55), Expect = 9.2,   Method: Compositional matrix adjust.
 Identities = 19/55 (34%), Positives = 21/55 (38%), Gaps = 7/55 (12%)

Query: 54  GTVPTDLD-------QETGLARLELLGKLEGIDVFDTKPLDSSRKGTMKDPIIIE 101
           G  P DL+        ETGL  L  LG+  G D     P D    G  K    IE
Sbjct: 257 GVPPADLEAALRSPASETGLTVLRTLGRALGFDYRVLLPADDQHDGVGKTWTTIE 311


>5VXT-A nrPDB
          Length = 325

 Score = 25.4 bits (54), Expect = 9.6,   Method: Compositional matrix adjust.
 Identities = 12/40 (30%), Positives = 20/40 (50%)

Query: 40  VNGPETLIGPGAKEGTVPTDLDQETGLARLELLGKLEGID 79
           + GP  + G   ++G    DLD + G   L + G + G+D
Sbjct: 119 IEGPLYVAGAPVRDGVAKIDLDADEGAGPLVIHGTVTGLD 158


Searching..................................................done


Results from round 2


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value
Sequences used in model and found again:

6GIQ-d nrPDB                                                          298   7e-82
6HU9-d nrPDB                                                          241   6e-65
2Y69-F nrPDB                                                          167   2e-42
2OCC-F nrPDB                                                          165   9e-42
5Z62-F nrPDB                                                          162   4e-41
2ODX-A nrPDB                                                          149   7e-37

Sequences not found previously or not previously below threshold:

2E0Y-A nrPDB                                                           31   0.18 
2E0W-A nrPDB                                                           31   0.18 
5JRH-A nrPDB                                                           29   1.1  
6FOK-A nrPDB                                                           28   1.7  
1BIY-A nrPDB                                                           28   1.7  
4GL0-A nrPDB                                                           28   1.9  
1XC6-A nrPDB                                                           27   2.9  
4XZC-A nrPDB                                                           27   2.9  
6EPC-1 nrPDB                                                           26   6.7  
4CW4-A nrPDB                                                           26   7.9  


CONVERGED!
>6GIQ-d nrPDB
          Length = 155

 Score =  298 bits (763), Expect = 7e-82,   Method: Composition-based stats.
 Identities = 155/155 (100%), Positives = 155/155 (100%)

Query: 1   MLSLRQSIRFFKPATRTLCSSRYLLQQKPVVKTAQNLAEVNGPETLIGPGAKEGTVPTDL 60
           MLSLRQSIRFFKPATRTLCSSRYLLQQKPVVKTAQNLAEVNGPETLIGPGAKEGTVPTDL
Sbjct: 1   MLSLRQSIRFFKPATRTLCSSRYLLQQKPVVKTAQNLAEVNGPETLIGPGAKEGTVPTDL 60

Query: 61  DQETGLARLELLGKLEGIDVFDTKPLDSSRKGTMKDPIIIESYDDYRYVGCTGSPAGSHT 120
           DQETGLARLELLGKLEGIDVFDTKPLDSSRKGTMKDPIIIESYDDYRYVGCTGSPAGSHT
Sbjct: 61  DQETGLARLELLGKLEGIDVFDTKPLDSSRKGTMKDPIIIESYDDYRYVGCTGSPAGSHT 120

Query: 121 IMWLKPTVNEVARCWECGSVYKLNPVGVPNDDHHH 155
           IMWLKPTVNEVARCWECGSVYKLNPVGVPNDDHHH
Sbjct: 121 IMWLKPTVNEVARCWECGSVYKLNPVGVPNDDHHH 155


>6HU9-d nrPDB
          Length = 130

 Score =  241 bits (616), Expect = 6e-65,   Method: Composition-based stats.
 Identities = 130/130 (100%), Positives = 130/130 (100%)

Query: 26  QQKPVVKTAQNLAEVNGPETLIGPGAKEGTVPTDLDQETGLARLELLGKLEGIDVFDTKP 85
           QQKPVVKTAQNLAEVNGPETLIGPGAKEGTVPTDLDQETGLARLELLGKLEGIDVFDTKP
Sbjct: 1   QQKPVVKTAQNLAEVNGPETLIGPGAKEGTVPTDLDQETGLARLELLGKLEGIDVFDTKP 60

Query: 86  LDSSRKGTMKDPIIIESYDDYRYVGCTGSPAGSHTIMWLKPTVNEVARCWECGSVYKLNP 145
           LDSSRKGTMKDPIIIESYDDYRYVGCTGSPAGSHTIMWLKPTVNEVARCWECGSVYKLNP
Sbjct: 61  LDSSRKGTMKDPIIIESYDDYRYVGCTGSPAGSHTIMWLKPTVNEVARCWECGSVYKLNP 120

Query: 146 VGVPNDDHHH 155
           VGVPNDDHHH
Sbjct: 121 VGVPNDDHHH 130


>2Y69-F nrPDB
          Length = 129

 Score =  167 bits (423), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 35/95 (36%), Positives = 49/95 (51%), Gaps = 2/95 (2%)

Query: 51  AKEGTVPTDLDQETGLARLELLGKLEGIDVFDTKPLDSSRKGTMKDPIIIESYDDYRYVG 110
           A  G VPTD +Q TGL R  +L   +G D ++     ++  GT +DP ++ S  + R VG
Sbjct: 32  ASGGGVPTDEEQATGLEREVMLAARKGQDPYNILAPKAT-SGTKEDPNLVPSITNKRIVG 90

Query: 111 CTGSPAGSHTIMWLKPTVNEVARCWECGSVYKLNP 145
           C      S T++W      E  RC  CG+ YKL P
Sbjct: 91  CICEEDNS-TVIWFWLHKGEAQRCPSCGTHYKLVP 124


>2OCC-F nrPDB
          Length = 98

 Score =  165 bits (417), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 35/95 (36%), Positives = 49/95 (51%), Gaps = 2/95 (2%)

Query: 51  AKEGTVPTDLDQETGLARLELLGKLEGIDVFDTKPLDSSRKGTMKDPIIIESYDDYRYVG 110
           A  G VPTD +Q TGL R  +L   +G D ++     ++  GT +DP ++ S  + R VG
Sbjct: 1   ASGGGVPTDEEQATGLEREVMLAARKGQDPYNILAPKAT-SGTKEDPNLVPSITNKRIVG 59

Query: 111 CTGSPAGSHTIMWLKPTVNEVARCWECGSVYKLNP 145
           C      S T++W      E  RC  CG+ YKL P
Sbjct: 60  CICEEDNS-TVIWFWLHKGEAQRCPSCGTHYKLVP 93


>5Z62-F nrPDB
          Length = 98

 Score =  162 bits (411), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 33/95 (34%), Positives = 49/95 (51%), Gaps = 2/95 (2%)

Query: 51  AKEGTVPTDLDQETGLARLELLGKLEGIDVFDTKPLDSSRKGTMKDPIIIESYDDYRYVG 110
           A  G VPTD +Q TGL R  +L   +G+D ++      +  GT +DP ++ S  + R VG
Sbjct: 1   ASGGGVPTDEEQATGLEREIMLAAKKGLDPYNVLAPKGA-SGTREDPNLVPSISNKRIVG 59

Query: 111 CTGSPAGSHTIMWLKPTVNEVARCWECGSVYKLNP 145
           C      + +++W      E  RC  CG+ YKL P
Sbjct: 60  CICEEDNT-SVVWFWLHKGEAQRCPRCGAHYKLVP 93


>2ODX-A nrPDB
          Length = 80

 Score =  149 bits (375), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 77/77 (100%), Positives = 77/77 (100%)

Query: 79  DVFDTKPLDSSRKGTMKDPIIIESYDDYRYVGCTGSPAGSHTIMWLKPTVNEVARCWECG 138
           DVFDTKPLDSSRKGTMKDPIIIESYDDYRYVGCTGSPAGSHTIMWLKPTVNEVARCWECG
Sbjct: 4   DVFDTKPLDSSRKGTMKDPIIIESYDDYRYVGCTGSPAGSHTIMWLKPTVNEVARCWECG 63

Query: 139 SVYKLNPVGVPNDDHHH 155
           SVYKLNPVGVPNDDHHH
Sbjct: 64  SVYKLNPVGVPNDDHHH 80


>2E0Y-A nrPDB
          Length = 366

 Score = 31.2 bits (69), Expect = 0.18,   Method: Composition-based stats.
 Identities = 23/95 (24%), Positives = 38/95 (40%), Gaps = 12/95 (12%)

Query: 25  LQQKPVVKTAQNLAEVNGP---------ETLIGPGAKEGTVPTDLDQET--GLARLELLG 73
           L Q  + K+ + +AE NGP         E +     K G + T  D      + R  + G
Sbjct: 198 LVQANLAKSLEMIAE-NGPDEFYKGTIAEQIAQEMQKNGGLITKEDLAAYKAVERTPISG 256

Query: 74  KLEGIDVFDTKPLDSSRKGTMKDPIIIESYDDYRY 108
              G  V+   P  S     ++   I+E++D  +Y
Sbjct: 257 DYRGYQVYSMPPPSSGGIHIVQILNILENFDMKKY 291


>2E0W-A nrPDB
          Length = 556

 Score = 31.2 bits (69), Expect = 0.18,   Method: Composition-based stats.
 Identities = 23/95 (24%), Positives = 38/95 (40%), Gaps = 12/95 (12%)

Query: 25  LQQKPVVKTAQNLAEVNGP---------ETLIGPGAKEGTVPTDLDQET--GLARLELLG 73
           L Q  + K+ + +AE NGP         E +     K G + T  D      + R  + G
Sbjct: 198 LVQANLAKSLEMIAE-NGPDEFYKGTIAEQIAQEMQKNGGLITKEDLAAYKAVERTPISG 256

Query: 74  KLEGIDVFDTKPLDSSRKGTMKDPIIIESYDDYRY 108
              G  V+   P  S     ++   I+E++D  +Y
Sbjct: 257 DYRGYQVYSMPPPSSGGIHIVQILNILENFDMKKY 291


>5JRH-A nrPDB
          Length = 660

 Score = 28.5 bits (62), Expect = 1.1,   Method: Composition-based stats.
 Identities = 6/32 (18%), Positives = 10/32 (31%), Gaps = 1/32 (3%)

Query: 104 DDYRYVGCTGSPAGSHTIMWLKPTVNEVARCW 135
              R +G  G P       W    + +  +C 
Sbjct: 378 SSLRILGSVGEPINPEAWEWYWKKIGK-EKCP 408


>6FOK-A nrPDB
          Length = 723

 Score = 28.1 bits (61), Expect = 1.7,   Method: Composition-based stats.
 Identities = 12/33 (36%), Positives = 20/33 (60%), Gaps = 1/33 (3%)

Query: 32  KTAQNLAEVNGPETLI-GPGAKEGTVPTDLDQE 63
           +T   L  + GP+T++ GPGA  GT+  + + E
Sbjct: 157 ETYDKLTVIKGPQTVLWGPGASAGTILFEREPE 189


>1BIY-A nrPDB
          Length = 689

 Score = 28.1 bits (61), Expect = 1.7,   Method: Composition-based stats.
 Identities = 6/21 (28%), Positives = 12/21 (57%)

Query: 77 GIDVFDTKPLDSSRKGTMKDP 97
          G+D +  +P+ +   GT + P
Sbjct: 68 GLDPYKLRPVAAEIYGTKESP 88


>4GL0-A nrPDB
          Length = 333

 Score = 27.8 bits (60), Expect = 1.9,   Method: Composition-based stats.
 Identities = 16/91 (17%), Positives = 34/91 (37%), Gaps = 19/91 (20%)

Query: 58  TDLDQETGL--------ARLELLGKLE-GIDVFDTKPLDSSRKGTMKDPIII-------- 100
           T  ++ETG+        +   ++ K+E G   FD           MK+  ++        
Sbjct: 28  TKFEKETGIKVIYQTFDSNEAMMTKIEQGGTTFDIAVPSDYAISKMKEENLLIPLDHSKL 87

Query: 101 --ESYDDYRYVGCTGSPAGSHTIMWLKPTVN 129
             E Y D R++  +      +++ +   T+ 
Sbjct: 88  PNEKYLDPRFMDLSFDDDNKYSMPYFWGTLG 118


>1XC6-A nrPDB
          Length = 971

 Score = 27.4 bits (59), Expect = 2.9,   Method: Composition-based stats.
 Identities = 18/82 (21%), Positives = 29/82 (35%), Gaps = 5/82 (6%)

Query: 43  PETLIGPGAKEGTVPTDLDQETGLARLELLGKLEGIDVF--DTKPLDSSRKGTMKDPIII 100
           P   I      G  P  L +  G+ R      L+  D +  +     +  + T   PII+
Sbjct: 95  PGPYINAEVSGGGFPGWLQRVDGILRTSDEAYLKATDNYASNIAATIAKAQITNGGPIIL 154

Query: 101 ESYDDYRYVGCTGS---PAGSH 119
              ++     C G    P GS+
Sbjct: 155 YQPENEYSGACCGYNGFPDGSY 176


>4XZC-A nrPDB
          Length = 483

 Score = 27.4 bits (59), Expect = 2.9,   Method: Composition-based stats.
 Identities = 11/67 (16%), Positives = 25/67 (37%), Gaps = 6/67 (8%)

Query: 91  KGTMKDPIIIESYDD------YRYVGCTGSPAGSHTIMWLKPTVNEVARCWECGSVYKLN 144
           +G      +I++  +       + +        +   +++ P V    R  E G+ + + 
Sbjct: 337 QGPRGGKKMIKALTNTPLKWGKKIISLFAEDDFNGNKLYMHPGVLTAGRMSEMGACFGVV 396

Query: 145 PVGVPND 151
           PV  P D
Sbjct: 397 PVSNPED 403


>6EPC-1 nrPDB
          Length = 238

 Score = 26.2 bits (56), Expect = 6.7,   Method: Composition-based stats.
 Identities = 10/37 (27%), Positives = 15/37 (40%)

Query: 50  GAKEGTVPTDLDQETGLARLELLGKLEGIDVFDTKPL 86
           G+  G +     Q++G+ R  LLG         T P 
Sbjct: 201 GSSGGVIRLAAIQQSGVERQVLLGDQIPKVTISTLPP 237


>4CW4-A nrPDB
          Length = 639

 Score = 25.8 bits (55), Expect = 7.9,   Method: Composition-based stats.
 Identities = 14/54 (25%), Positives = 21/54 (38%)

Query: 64  TGLARLELLGKLEGIDVFDTKPLDSSRKGTMKDPIIIESYDDYRYVGCTGSPAG 117
           TG     L    +GIDV  +        G  + PI+ E  + Y  +G   +  G
Sbjct: 283 TGACATFLYNLQKGIDVITSGQARVVIVGNSEAPILPECIEGYSAMGALATEEG 336


  Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta
    Posted date:  Jan 3, 2023  9:05 PM
  Number of letters in database: 10,336,785
  Number of sequences in database:  36,641
  
Lambda     K      H
   0.311    0.131    0.386 

Lambda     K      H
   0.267   0.0404    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,571,280
Number of Sequences: 36641
Number of extensions: 257077
Number of successful extensions: 644
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 607
Number of HSP's gapped (non-prelim): 41
length of query: 155
length of database: 10,336,785
effective HSP length: 89
effective length of query: 66
effective length of database: 7,075,736
effective search space: 466998576
effective search space used: 466998576
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.3 bits)
S2: 55 (25.8 bits)