BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= P02886 (253 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 2W94-A nrPDB 528 e-151 2VM9-A nrPDB 235 1e-62 5N6W-A nrPDB 59 2e-09 1SDD-B nrPDB 50 1e-06 4QDQ-A nrPDB 44 5e-05 4QDS-A nrPDB 44 6e-05 5DN2-A nrPDB 44 6e-05 4AG4-A nrPDB 42 3e-04 2Z4F-A nrPDB 41 6e-04 2R7E-B nrPDB 40 6e-04 5K8D-B nrPDB 40 7e-04 4BDV-B nrPDB 40 7e-04 6BSD-A nrPDB 39 0.002 2CGZ-A nrPDB 38 0.004 4DEQ-A nrPDB 32 0.24 2HS8-A nrPDB 30 0.78 5V86-A nrPDB 29 1.9 >2W94-A nrPDB Length = 254 Score = 528 bits (1360), Expect = e-151, Method: Compositional matrix adjust. Identities = 253/253 (100%), Positives = 253/253 (100%) Query: 1 MSTQGLVQLLANAQCHLRTSTNYNGVHTQFNSALNYKNNGTNTIDGSEAWCSSIVDTNQY 60 MSTQGLVQLLANAQCHLRTSTNYNGVHTQFNSALNYKNNGTNTIDGSEAWCSSIVDTNQY Sbjct: 2 MSTQGLVQLLANAQCHLRTSTNYNGVHTQFNSALNYKNNGTNTIDGSEAWCSSIVDTNQY 61 Query: 61 IVAGCEVPRTFMCVALQGRGDADQWVTSYKIRYSLDNVSWFEYRNGAAVTGVTDRNTVVN 120 IVAGCEVPRTFMCVALQGRGDADQWVTSYKIRYSLDNVSWFEYRNGAAVTGVTDRNTVVN Sbjct: 62 IVAGCEVPRTFMCVALQGRGDADQWVTSYKIRYSLDNVSWFEYRNGAAVTGVTDRNTVVN 121 Query: 121 HFFDTPIRARSIAIHPLTWNGHISLRCEFYTQPVQSSVTQVGADIYTGDNCALNTGSGKR 180 HFFDTPIRARSIAIHPLTWNGHISLRCEFYTQPVQSSVTQVGADIYTGDNCALNTGSGKR Sbjct: 122 HFFDTPIRARSIAIHPLTWNGHISLRCEFYTQPVQSSVTQVGADIYTGDNCALNTGSGKR 181 Query: 181 EVVVPVKFQFEFATLPKVALNFDQIDCTDATNQTRIGVQPRNITTKGFDCVFYTWNENKV 240 EVVVPVKFQFEFATLPKVALNFDQIDCTDATNQTRIGVQPRNITTKGFDCVFYTWNENKV Sbjct: 182 EVVVPVKFQFEFATLPKVALNFDQIDCTDATNQTRIGVQPRNITTKGFDCVFYTWNENKV 241 Query: 241 YSLRADYIATALE 253 YSLRADYIATALE Sbjct: 242 YSLRADYIATALE 254 >2VM9-A nrPDB Length = 257 Score = 235 bits (600), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 123/252 (48%), Positives = 162/252 (64%), Gaps = 6/252 (2%) Query: 5 GLVQLLANAQCHLRTSTNYNGVHTQFNSALNYKNNG-TNTIDGSEAWCSSIVDTNQYIVA 63 G V LANA +LR+ST+YN H NS LN+ N+ + DGSE+W SS++D NQ+IVA Sbjct: 6 GSVSCLANALLNLRSSTDYNADHGVKNSILNFSNSKDASRFDGSESWSSSVLDKNQFIVA 65 Query: 64 GCEVPRTFMCVALQGRGDADQWVTSYKIRYSLDNVSWFEYRNGAAVTGVTDRNTVVNHFF 123 G + + F+ ++ QGRGD DQWVTSYK+RY+LDNV+W EY NG + DRN++V F Sbjct: 66 GSDSVKHFVAISTQGRGDHDQWVTSYKLRYTLDNVNWVEYNNGEIINANKDRNSIVTINF 125 Query: 124 DTPIRARSIAIHPLTWNGHISLRCEFYTQPVQS---SVTQVGADIYTGDNCALNTGSGKR 180 + PI+ARSIAIHP T+N HISLR E Y PV+S QVG ++ GD +LN+G+G R Sbjct: 126 NPPIKARSIAIHPQTYNNHISLRWELYALPVKSYSNPSVQVG-EVSIGDR-SLNSGTGSR 183 Query: 181 EVVVPVKFQFEFATLPKVALNFDQIDCTDATNQTRIGVQPRNITTKGFDCVFYTWNENKV 240 +V VKF EF ++P V++ ++D Q R + NITTKGFD F TW N V Sbjct: 184 TIVRHVKFPVEFLSVPIVSIGCKKVDAHTDNGQMRWEGKSENITTKGFDLTFITWGNNAV 243 Query: 241 YSLRADYIATAL 252 Y L DY+A Sbjct: 244 YDLTFDYVAVEF 255 >5N6W-A nrPDB Length = 201 Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 31/106 (29%), Positives = 53/106 (50%), Gaps = 5/106 (4%) Query: 49 AWCSSIVDTNQYIVAGCEVPRTFMCVALQGRGDADQWVTSYKIRYSLDN-VSWFEYR--- 104 AW S D++Q++ + + + QG D D+W+T Y ++Y D ++W Y+ Sbjct: 88 AWLSKFQDSSQWLQIDLKEIKVISGILTQGHCDIDEWMTKYSVQYRTDERLNWIYYKDQT 147 Query: 105 -NGAAVTGVTDRNTVVNHFFDTPIRARSIAIHPLTWNGHISLRCEF 149 N G +DR + V + PI +R I + PL W+ I++R E Sbjct: 148 GNNRVFYGNSDRTSTVQNLLRPPIISRFIRLIPLGWHVRIAIRMEL 193 >1SDD-B nrPDB Length = 647 Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 32/109 (29%), Positives = 50/109 (45%), Gaps = 7/109 (6%) Query: 49 AWCSSIVDTNQYIVAGCEVPRTFMCVALQG--RGDADQWVTSYKIRYSLDNVSWFEYRNG 106 AW + + NQ++ + + QG ++ +V SY I YS W YR Sbjct: 534 AWQAKANNNNQWLQIDLLKIKKITAIVTQGCKSLSSEMYVKSYTIHYSDQGTDWKPYREK 593 Query: 107 AAVT-----GVTDRNTVVNHFFDTPIRARSIAIHPLTWNGHISLRCEFY 150 +++ G + V +FF+ PI +R I I P TWN I+LR E + Sbjct: 594 SSMVDKIFEGNNNVRGHVKNFFNPPIISRFIRIIPKTWNQSIALRLELF 642 >4QDQ-A nrPDB Length = 329 Score = 44.3 bits (103), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 38/148 (25%), Positives = 59/148 (39%), Gaps = 17/148 (11%) Query: 10 LANAQCHLRTSTNYNGVHTQFNSALNYKNNGTNTIDGSEAWCSSIVDTNQYIVAGCEVPR 69 +AN Q +ST +G T S L+ +NG W ++ +Y+ Sbjct: 17 IANEQISA-SSTYSDGRWTPQQSRLHGDDNG---------WTPNLDSNKEYLQVDLRFLT 66 Query: 70 TFMCVALQGRGDADQ----WVTSYKIRYSLDNVSWFEYRNGA---AVTGVTDRNTVVNHF 122 +A QG + +V SYK+ S + W YR+G D VV + Sbjct: 67 MLTAIATQGAISRETQNGYYVKSYKLEVSTNGEDWMVYRHGKNHKVFQANNDATEVVLNK 126 Query: 123 FDTPIRARSIAIHPLTWNGHISLRCEFY 150 P+ R + I P TW+ I+LR E + Sbjct: 127 LHAPLLTRFVRIRPQTWHSGIALRLELF 154 >4QDS-A nrPDB Length = 187 Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 38/148 (25%), Positives = 59/148 (39%), Gaps = 17/148 (11%) Query: 10 LANAQCHLRTSTNYNGVHTQFNSALNYKNNGTNTIDGSEAWCSSIVDTNQYIVAGCEVPR 69 +AN Q +ST +G T S L+ +NG W ++ +Y+ Sbjct: 18 IANEQISA-SSTYSDGRWTPQQSRLHGDDNG---------WTPNLDSNKEYLQVDLRFLT 67 Query: 70 TFMCVALQGRGDADQ----WVTSYKIRYSLDNVSWFEYRNGA---AVTGVTDRNTVVNHF 122 +A QG + +V SYK+ S + W YR+G D VV + Sbjct: 68 MLTAIATQGAISRETQNGYYVKSYKLEVSTNGEDWMVYRHGKNHKVFQANNDATEVVLNK 127 Query: 123 FDTPIRARSIAIHPLTWNGHISLRCEFY 150 P+ R + I P TW+ I+LR E + Sbjct: 128 LHAPLLTRFVRIRPQTWHSGIALRLELF 155 >5DN2-A nrPDB Length = 156 Score = 43.9 bits (102), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 38/148 (25%), Positives = 59/148 (39%), Gaps = 17/148 (11%) Query: 10 LANAQCHLRTSTNYNGVHTQFNSALNYKNNGTNTIDGSEAWCSSIVDTNQYIVAGCEVPR 69 +AN Q +ST +G T S L+ +NG W ++ +Y+ Sbjct: 15 IANEQISA-SSTYSDGRWTPQQSRLHGDDNG---------WTPNLDSNKEYLQVDLRFLT 64 Query: 70 TFMCVALQGRGDADQ----WVTSYKIRYSLDNVSWFEYRNGA---AVTGVTDRNTVVNHF 122 +A QG + +V SYK+ S + W YR+G D VV + Sbjct: 65 MLTAIATQGAISRETQNGYYVKSYKLEVSTNGEDWMVYRHGKNHKVFQANNDATEVVLNK 124 Query: 123 FDTPIRARSIAIHPLTWNGHISLRCEFY 150 P+ R + I P TW+ I+LR E + Sbjct: 125 LHAPLLTRFVRIRPQTWHSGIALRLELF 152 >4AG4-A nrPDB Length = 351 Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 37/152 (24%), Positives = 60/152 (39%), Gaps = 14/152 (9%) Query: 37 KNNGTNTIDGSEAWC---SSIVDTNQYIVAGCEVPRTFMCVALQGR---GDADQWVTSYK 90 +++ + DG AWC S +Y+ + V QGR G ++ SY+ Sbjct: 35 RHSRLESSDGDGAWCPAGSVFPKEEEYLQVDLQRLHLVALVGTQGRHAGGLGKEFSRSYR 94 Query: 91 IRYSLDNVSWFEYRN---GAAVTGVTDRNTVVNHFFDTPIRARSIAIHPLTWN-GHISLR 146 +RYS D W +++ ++G D VV P+ AR + +P + LR Sbjct: 95 LRYSRDGRRWMGWKDRWGQEVISGNEDPEGVVLKDLGPPMVARLVRFYPRADRVMSVCLR 154 Query: 147 CEFY----TQPVQSSVTQVGADIYTGDNCALN 174 E Y + S VG +Y + LN Sbjct: 155 VELYGCLWRDGLLSYTAPVGQTMYLSEAVYLN 186 >2Z4F-A nrPDB Length = 173 Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 32/134 (23%), Positives = 56/134 (41%), Gaps = 11/134 (8%) Query: 28 TQFNSALNYKNNGTNTIDGSEAWCSSIV----DTNQYIVAGCEVPRTFMCVALQGR---G 80 +Q++ + K ++ +G AWC I D +++ V QGR G Sbjct: 29 SQWSESTAAKYGRLDSEEGDGAWCPEIPVEPDDLKEFLQIDLHTLHFITLVGTQGRHAGG 88 Query: 81 DADQWVTSYKIRYSLDNVSWFEYRN---GAAVTGVTDRNTVVNHFFDTPIRARSIAIHPL 137 ++ YKI YS D W +RN + G ++ + + PI AR + P+ Sbjct: 89 HGIEFAPMYKINYSRDGTRWISWRNRHGKQVLDGNSNPYDIFLKDLEPPIVARFVRFIPV 148 Query: 138 TWNG-HISLRCEFY 150 T + ++ +R E Y Sbjct: 149 TDHSMNVCMRVELY 162 >2R7E-B nrPDB Length = 770 Score = 40.4 bits (93), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 5/70 (7%) Query: 85 WVTSYKIRYSLDNVSWFEYRNGAAVT-----GVTDRNTVVNHFFDTPIRARSIAIHPLTW 139 +++ + I YSLD W YR + T G D + + ++ F+ PI AR I +HP + Sbjct: 535 YISQFIIMYSLDGKKWQTYRGNSTGTLMVFFGNVDSSGIKHNIFNPPIIARYIRLHPTHY 594 Query: 140 NGHISLRCEF 149 + +LR E Sbjct: 595 SIRSTLRMEL 604 Score = 35.4 bits (80), Expect = 0.025, Method: Compositional matrix adjust. Identities = 28/107 (26%), Positives = 43/107 (40%), Gaps = 5/107 (4%) Query: 47 SEAWCSSIVDTNQYIVAGCEVPRTFMCVALQGRGD--ADQWVTSYKIRYSLDNVSW-FEY 103 S AW + + +++ + V QG +V + I S D W + Sbjct: 654 SNAWRPQVNNPKEWLQVDFQKTMKVTGVTTQGVKSLLTSMYVKEFLISSSQDGHQWTLFF 713 Query: 104 RNGAA--VTGVTDRNTVVNHFFDTPIRARSIAIHPLTWNGHISLRCE 148 +NG G D T V + D P+ R + IHP +W I+LR E Sbjct: 714 QNGKVKVFQGNQDSFTPVVNSLDPPLLTRYLRIHPQSWVHQIALRME 760 >5K8D-B nrPDB Length = 865 Score = 40.4 bits (93), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 5/70 (7%) Query: 85 WVTSYKIRYSLDNVSWFEYRNGAAVT-----GVTDRNTVVNHFFDTPIRARSIAIHPLTW 139 +++ + I YSLD W YR + T G D + + ++ F+ PI AR I +HP + Sbjct: 404 YISQFIIMYSLDGKKWQTYRGNSTGTLMVFFGNVDSSGIKHNIFNPPIIARYIRLHPTHY 463 Query: 140 NGHISLRCEF 149 + +LR E Sbjct: 464 SIRSTLRMEL 473 Score = 35.0 bits (79), Expect = 0.027, Method: Compositional matrix adjust. Identities = 28/107 (26%), Positives = 43/107 (40%), Gaps = 5/107 (4%) Query: 47 SEAWCSSIVDTNQYIVAGCEVPRTFMCVALQGRGD--ADQWVTSYKIRYSLDNVSW-FEY 103 S AW + + +++ + V QG +V + I S D W + Sbjct: 523 SNAWRPQVNNPKEWLQVDFQKTMKVTGVTTQGVKSLLTSMYVKEFLISSSQDGHQWTLFF 582 Query: 104 RNGAA--VTGVTDRNTVVNHFFDTPIRARSIAIHPLTWNGHISLRCE 148 +NG G D T V + D P+ R + IHP +W I+LR E Sbjct: 583 QNGKVKVFQGNQDSFTPVVNSLDPPLLTRYLRIHPQSWVHQIALRME 629 >4BDV-B nrPDB Length = 685 Score = 40.4 bits (93), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 5/70 (7%) Query: 85 WVTSYKIRYSLDNVSWFEYRNGAAVT-----GVTDRNTVVNHFFDTPIRARSIAIHPLTW 139 +++ + I YSLD W YR + T G D + + ++ F+ PI AR I +HP + Sbjct: 450 YISQFIIMYSLDGKKWQTYRGNSTGTLMVFFGNVDSSGIKHNIFNPPIIARYIRLHPTHY 509 Query: 140 NGHISLRCEF 149 + +LR E Sbjct: 510 SIRSTLRMEL 519 Score = 35.4 bits (80), Expect = 0.026, Method: Compositional matrix adjust. Identities = 28/107 (26%), Positives = 43/107 (40%), Gaps = 5/107 (4%) Query: 47 SEAWCSSIVDTNQYIVAGCEVPRTFMCVALQGRGD--ADQWVTSYKIRYSLDNVSW-FEY 103 S AW + + +++ + V QG +V + I S D W + Sbjct: 569 SNAWRPQVNNPKEWLQVDFQKTMKVTGVTTQGVKSLLTSMYVKEFLISSSQDGHQWTLFF 628 Query: 104 RNGAA--VTGVTDRNTVVNHFFDTPIRARSIAIHPLTWNGHISLRCE 148 +NG G D T V + D P+ R + IHP +W I+LR E Sbjct: 629 QNGKVKVFQGNQDSFTPVVNSLDPPLLTRYLRIHPQSWVHQIALRME 675 >6BSD-A nrPDB Length = 876 Score = 38.9 bits (89), Expect = 0.002, Method: Composition-based stats. Identities = 37/147 (25%), Positives = 57/147 (38%), Gaps = 14/147 (9%) Query: 45 DGSEAWC---SSIVDTNQYIVAGCEVPRTFMCVALQGR---GDADQWVTSYKIRYSLDNV 98 DG AWC S +Y+ + V QGR G ++ SY++RYS D Sbjct: 68 DGDGAWCPAGSVFPKEEEYLQVDLQRLHLVALVGTQGRHAGGLGKEFSRSYRLRYSRDGR 127 Query: 99 SWFEYRN---GAAVTGVTDRNTVVNHFFDTPIRARSIAIHPLTWN-GHISLRCEFY---- 150 W +++ ++G D VV P+ AR + +P + LR E Y Sbjct: 128 RWMGWKDRWGQEVISGNEDPEGVVLKDLGPPMVARLVRFYPRADRVMSVCLRVELYGCLW 187 Query: 151 TQPVQSSVTQVGADIYTGDNCALNTGS 177 + S VG +Y + LN + Sbjct: 188 RDGLLSYTAPVGQTMYLSEAVYLNDST 214 >2CGZ-A nrPDB Length = 101 Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust. Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 1/70 (1%) Query: 180 REVVVPVKFQFEFATLPKVALNFDQIDCTDATNQTRIGVQPRNITTKGFDCVFYTWNENK 239 RE+ + F + P V L+ Q+D + N R+ + +++ GF YTW+ K Sbjct: 29 RELAKNITFASPYCRPPVVLLSITQLDVEQSQN-LRVIARLYSVSPTGFKASCYTWHNTK 87 Query: 240 VYSLRADYIA 249 VYS+ +I+ Sbjct: 88 VYSMSISWIS 97 >4DEQ-A nrPDB Length = 218 Score = 32.0 bits (71), Expect = 0.24, Method: Compositional matrix adjust. Identities = 36/142 (25%), Positives = 50/142 (35%), Gaps = 16/142 (11%) Query: 16 HLRTSTNYNGVHTQFNSALNYKNNGTNTIDGSEAWCSSIVDTNQYIVAGCEVPRTFMCVA 75 + S+ Y+ + S LNY NG W ++I + R V Sbjct: 21 QITASSQYSTNWSAERSRLNYPENG---------WTPGEDSYREWIQVDLGLLRFVTAVG 71 Query: 76 LQGRGDADQWVTSYKIRYSLDNVS----WFEYRNG---AAVTGVTDRNTVVNHFFDTPIR 128 QG + Y Y +D S W + G G T+ VV F P+ Sbjct: 72 TQGAISKETKKKYYVKTYKIDVSSNGEDWITIKEGNKPVLFQGNTNPTDVVVAVFPKPLI 131 Query: 129 ARSIAIHPLTWNGHISLRCEFY 150 R + I P TW IS+R E Y Sbjct: 132 TRFVRIKPATWETGISMRFEVY 153 >2HS8-A nrPDB Length = 402 Score = 30.4 bits (67), Expect = 0.78, Method: Compositional matrix adjust. Identities = 12/26 (46%), Positives = 19/26 (73%) Query: 139 WNGHISLRCEFYTQPVQSSVTQVGAD 164 + G ++ RC+F TQ VQ+ V+ +GAD Sbjct: 213 YGGSLANRCKFITQVVQAVVSAIGAD 238 >5V86-A nrPDB Length = 384 Score = 29.3 bits (64), Expect = 1.9, Method: Compositional matrix adjust. Identities = 18/79 (22%), Positives = 34/79 (43%), Gaps = 8/79 (10%) Query: 124 DTPIRARSIAIHPLTWNGHISLRCEFYTQPVQSSVTQVGADIYTGDNCALNTGSGKREVV 183 D + SI++ + W + +CEF Q +T++G D + + ++E+ Sbjct: 217 DLALDPASISVLIIAWKFRAATQCEFSKQEFMDGMTELGCD--SIEKLKAQIPKMEQELK 274 Query: 184 VPVKFQ------FEFATLP 196 P +F+ F FA P Sbjct: 275 EPGRFKDFYQFTFNFAKNP 293 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 2W94-A nrPDB 387 e-108 2VM9-A nrPDB 341 2e-94 6BSD-A nrPDB 193 1e-49 4AG4-A nrPDB 193 1e-49 2Z4F-A nrPDB 165 2e-41 4QDQ-A nrPDB 160 6e-40 4QDS-A nrPDB 159 1e-39 5DN2-A nrPDB 158 2e-39 5N6W-A nrPDB 144 3e-35 1SDD-B nrPDB 140 6e-34 5K8D-B nrPDB 115 1e-26 4BDV-B nrPDB 115 2e-26 2R7E-B nrPDB 114 3e-26 Sequences not found previously or not previously below threshold: 4DEQ-A nrPDB 99 1e-21 2CGZ-A nrPDB 41 4e-04 2DC0-A nrPDB 34 0.097 6A0L-A nrPDB 30 1.1 4TQO-B nrPDB 30 1.2 3HB6-A nrPDB 30 1.2 1K12-A nrPDB 29 1.7 2HVY-B nrPDB 29 2.1 2EY4-C nrPDB 29 2.7 4URI-A nrPDB 28 4.5 6CJJ-A nrPDB 28 5.1 1EUU-A nrPDB 27 6.8 1K3I-A nrPDB 27 7.5 >2W94-A nrPDB Length = 254 Score = 387 bits (993), Expect = e-108, Method: Composition-based stats. Identities = 253/253 (100%), Positives = 253/253 (100%) Query: 1 MSTQGLVQLLANAQCHLRTSTNYNGVHTQFNSALNYKNNGTNTIDGSEAWCSSIVDTNQY 60 MSTQGLVQLLANAQCHLRTSTNYNGVHTQFNSALNYKNNGTNTIDGSEAWCSSIVDTNQY Sbjct: 2 MSTQGLVQLLANAQCHLRTSTNYNGVHTQFNSALNYKNNGTNTIDGSEAWCSSIVDTNQY 61 Query: 61 IVAGCEVPRTFMCVALQGRGDADQWVTSYKIRYSLDNVSWFEYRNGAAVTGVTDRNTVVN 120 IVAGCEVPRTFMCVALQGRGDADQWVTSYKIRYSLDNVSWFEYRNGAAVTGVTDRNTVVN Sbjct: 62 IVAGCEVPRTFMCVALQGRGDADQWVTSYKIRYSLDNVSWFEYRNGAAVTGVTDRNTVVN 121 Query: 121 HFFDTPIRARSIAIHPLTWNGHISLRCEFYTQPVQSSVTQVGADIYTGDNCALNTGSGKR 180 HFFDTPIRARSIAIHPLTWNGHISLRCEFYTQPVQSSVTQVGADIYTGDNCALNTGSGKR Sbjct: 122 HFFDTPIRARSIAIHPLTWNGHISLRCEFYTQPVQSSVTQVGADIYTGDNCALNTGSGKR 181 Query: 181 EVVVPVKFQFEFATLPKVALNFDQIDCTDATNQTRIGVQPRNITTKGFDCVFYTWNENKV 240 EVVVPVKFQFEFATLPKVALNFDQIDCTDATNQTRIGVQPRNITTKGFDCVFYTWNENKV Sbjct: 182 EVVVPVKFQFEFATLPKVALNFDQIDCTDATNQTRIGVQPRNITTKGFDCVFYTWNENKV 241 Query: 241 YSLRADYIATALE 253 YSLRADYIATALE Sbjct: 242 YSLRADYIATALE 254 >2VM9-A nrPDB Length = 257 Score = 341 bits (874), Expect = 2e-94, Method: Composition-based stats. Identities = 123/252 (48%), Positives = 162/252 (64%), Gaps = 6/252 (2%) Query: 5 GLVQLLANAQCHLRTSTNYNGVHTQFNSALNYKNNG-TNTIDGSEAWCSSIVDTNQYIVA 63 G V LANA +LR+ST+YN H NS LN+ N+ + DGSE+W SS++D NQ+IVA Sbjct: 6 GSVSCLANALLNLRSSTDYNADHGVKNSILNFSNSKDASRFDGSESWSSSVLDKNQFIVA 65 Query: 64 GCEVPRTFMCVALQGRGDADQWVTSYKIRYSLDNVSWFEYRNGAAVTGVTDRNTVVNHFF 123 G + + F+ ++ QGRGD DQWVTSYK+RY+LDNV+W EY NG + DRN++V F Sbjct: 66 GSDSVKHFVAISTQGRGDHDQWVTSYKLRYTLDNVNWVEYNNGEIINANKDRNSIVTINF 125 Query: 124 DTPIRARSIAIHPLTWNGHISLRCEFYTQPVQSS---VTQVGADIYTGDNCALNTGSGKR 180 + PI+ARSIAIHP T+N HISLR E Y PV+S QVG ++ GD +LN+G+G R Sbjct: 126 NPPIKARSIAIHPQTYNNHISLRWELYALPVKSYSNPSVQVG-EVSIGDR-SLNSGTGSR 183 Query: 181 EVVVPVKFQFEFATLPKVALNFDQIDCTDATNQTRIGVQPRNITTKGFDCVFYTWNENKV 240 +V VKF EF ++P V++ ++D Q R + NITTKGFD F TW N V Sbjct: 184 TIVRHVKFPVEFLSVPIVSIGCKKVDAHTDNGQMRWEGKSENITTKGFDLTFITWGNNAV 243 Query: 241 YSLRADYIATAL 252 Y L DY+A Sbjct: 244 YDLTFDYVAVEF 255 >6BSD-A nrPDB Length = 876 Score = 193 bits (489), Expect = 1e-49, Method: Composition-based stats. Identities = 36/155 (23%), Positives = 60/155 (38%), Gaps = 14/155 (9%) Query: 37 KNNGTNTIDGSEAWCS---SIVDTNQYIVAGCEVPRTFMCVALQGR---GDADQWVTSYK 90 +++ + DG AWC +Y+ + V QGR G ++ SY+ Sbjct: 60 RHSRLESSDGDGAWCPAGSVFPKEEEYLQVDLQRLHLVALVGTQGRHAGGLGKEFSRSYR 119 Query: 91 IRYSLDNVSWFEYRN---GAAVTGVTDRNTVVNHFFDTPIRARSIAIHPLTWN-GHISLR 146 +RYS D W +++ ++G D VV P+ AR + +P + LR Sbjct: 120 LRYSRDGRRWMGWKDRWGQEVISGNEDPEGVVLKDLGPPMVARLVRFYPRADRVMSVCLR 179 Query: 147 CEFY----TQPVQSSVTQVGADIYTGDNCALNTGS 177 E Y + S VG +Y + LN + Sbjct: 180 VELYGCLWRDGLLSYTAPVGQTMYLSEAVYLNDST 214 >4AG4-A nrPDB Length = 351 Score = 193 bits (489), Expect = 1e-49, Method: Composition-based stats. Identities = 36/155 (23%), Positives = 60/155 (38%), Gaps = 14/155 (9%) Query: 37 KNNGTNTIDGSEAWCS---SIVDTNQYIVAGCEVPRTFMCVALQGR---GDADQWVTSYK 90 +++ + DG AWC +Y+ + V QGR G ++ SY+ Sbjct: 35 RHSRLESSDGDGAWCPAGSVFPKEEEYLQVDLQRLHLVALVGTQGRHAGGLGKEFSRSYR 94 Query: 91 IRYSLDNVSWFEYRN---GAAVTGVTDRNTVVNHFFDTPIRARSIAIHPLTWN-GHISLR 146 +RYS D W +++ ++G D VV P+ AR + +P + LR Sbjct: 95 LRYSRDGRRWMGWKDRWGQEVISGNEDPEGVVLKDLGPPMVARLVRFYPRADRVMSVCLR 154 Query: 147 CEFY----TQPVQSSVTQVGADIYTGDNCALNTGS 177 E Y + S VG +Y + LN + Sbjct: 155 VELYGCLWRDGLLSYTAPVGQTMYLSEAVYLNDST 189 >2Z4F-A nrPDB Length = 173 Score = 165 bits (418), Expect = 2e-41, Method: Composition-based stats. Identities = 32/134 (23%), Positives = 56/134 (41%), Gaps = 11/134 (8%) Query: 28 TQFNSALNYKNNGTNTIDGSEAWCSSIV----DTNQYIVAGCEVPRTFMCVALQGR---G 80 +Q++ + K ++ +G AWC I D +++ V QGR G Sbjct: 29 SQWSESTAAKYGRLDSEEGDGAWCPEIPVEPDDLKEFLQIDLHTLHFITLVGTQGRHAGG 88 Query: 81 DADQWVTSYKIRYSLDNVSWFEYRN---GAAVTGVTDRNTVVNHFFDTPIRARSIAIHPL 137 ++ YKI YS D W +RN + G ++ + + PI AR + P+ Sbjct: 89 HGIEFAPMYKINYSRDGTRWISWRNRHGKQVLDGNSNPYDIFLKDLEPPIVARFVRFIPV 148 Query: 138 TWN-GHISLRCEFY 150 T + ++ +R E Y Sbjct: 149 TDHSMNVCMRVELY 162 >4QDQ-A nrPDB Length = 329 Score = 160 bits (404), Expect = 6e-40, Method: Composition-based stats. Identities = 38/148 (25%), Positives = 59/148 (39%), Gaps = 17/148 (11%) Query: 10 LANAQCHLRTSTNYNGVHTQFNSALNYKNNGTNTIDGSEAWCSSIVDTNQYIVAGCEVPR 69 +AN Q +ST +G T S L+ +NG W ++ +Y+ Sbjct: 17 IANEQISA-SSTYSDGRWTPQQSRLHGDDNG---------WTPNLDSNKEYLQVDLRFLT 66 Query: 70 TFMCVALQGRGDADQ----WVTSYKIRYSLDNVSWFEYRNGA---AVTGVTDRNTVVNHF 122 +A QG + +V SYK+ S + W YR+G D VV + Sbjct: 67 MLTAIATQGAISRETQNGYYVKSYKLEVSTNGEDWMVYRHGKNHKVFQANNDATEVVLNK 126 Query: 123 FDTPIRARSIAIHPLTWNGHISLRCEFY 150 P+ R + I P TW+ I+LR E + Sbjct: 127 LHAPLLTRFVRIRPQTWHSGIALRLELF 154 Score = 71.7 bits (174), Expect = 3e-13, Method: Composition-based stats. Identities = 32/158 (20%), Positives = 59/158 (37%), Gaps = 29/158 (18%) Query: 9 LLANAQCHLRTSTNYNGVHTQFNSALNYKNNGTNTIDGSEAWCSSIVDT---NQYIVAGC 65 L+A++Q ++ Y + + + L +G W I +++ Sbjct: 173 LIADSQISASSTQEY--LWSPSAARLVSSRSG---------WFPRIPQAQPGEEWLQVDL 221 Query: 66 EVPRTFMCVALQGRGDADQ--------WVTSYKIRYSLDNVSWFEYRNGAA-----VTGV 112 P+T V +QG D +V +K+ YSL+ W ++ G Sbjct: 222 GTPKTVKGVIIQGARGGDSITAVEARAFVRKFKVSYSLNGKDWEYIQDPRTQQPKLFEGN 281 Query: 113 TDRNTVVNHFFDTPIRARSIAIHPLTWN-GHISLRCEF 149 +T FD PI A+ + ++P W+ I +R E Sbjct: 282 MHYDTPDIRRFD-PIPAQYVRVYPERWSPAGIGMRLEV 318 >4QDS-A nrPDB Length = 187 Score = 159 bits (402), Expect = 1e-39, Method: Composition-based stats. Identities = 38/148 (25%), Positives = 59/148 (39%), Gaps = 17/148 (11%) Query: 10 LANAQCHLRTSTNYNGVHTQFNSALNYKNNGTNTIDGSEAWCSSIVDTNQYIVAGCEVPR 69 +AN Q +ST +G T S L+ +NG W ++ +Y+ Sbjct: 18 IANEQISA-SSTYSDGRWTPQQSRLHGDDNG---------WTPNLDSNKEYLQVDLRFLT 67 Query: 70 TFMCVALQGRGDADQ----WVTSYKIRYSLDNVSWFEYRNGA---AVTGVTDRNTVVNHF 122 +A QG + +V SYK+ S + W YR+G D VV + Sbjct: 68 MLTAIATQGAISRETQNGYYVKSYKLEVSTNGEDWMVYRHGKNHKVFQANNDATEVVLNK 127 Query: 123 FDTPIRARSIAIHPLTWNGHISLRCEFY 150 P+ R + I P TW+ I+LR E + Sbjct: 128 LHAPLLTRFVRIRPQTWHSGIALRLELF 155 >5DN2-A nrPDB Length = 156 Score = 158 bits (400), Expect = 2e-39, Method: Composition-based stats. Identities = 38/148 (25%), Positives = 59/148 (39%), Gaps = 17/148 (11%) Query: 10 LANAQCHLRTSTNYNGVHTQFNSALNYKNNGTNTIDGSEAWCSSIVDTNQYIVAGCEVPR 69 +AN Q +ST +G T S L+ +NG W ++ +Y+ Sbjct: 15 IANEQISA-SSTYSDGRWTPQQSRLHGDDNG---------WTPNLDSNKEYLQVDLRFLT 64 Query: 70 TFMCVALQGRGDADQ----WVTSYKIRYSLDNVSWFEYRNGA---AVTGVTDRNTVVNHF 122 +A QG + +V SYK+ S + W YR+G D VV + Sbjct: 65 MLTAIATQGAISRETQNGYYVKSYKLEVSTNGEDWMVYRHGKNHKVFQANNDATEVVLNK 124 Query: 123 FDTPIRARSIAIHPLTWNGHISLRCEFY 150 P+ R + I P TW+ I+LR E + Sbjct: 125 LHAPLLTRFVRIRPQTWHSGIALRLELF 152 >5N6W-A nrPDB Length = 201 Score = 144 bits (363), Expect = 3e-35, Method: Composition-based stats. Identities = 33/125 (26%), Positives = 57/125 (45%), Gaps = 5/125 (4%) Query: 30 FNSALNYKNNGTNTIDGSEAWCSSIVDTNQYIVAGCEVPRTFMCVALQGRGDADQWVTSY 89 + S+ N+ AW S D++Q++ + + + QG D D+W+T Y Sbjct: 69 WYSSWTANKARLNSQGFGCAWLSKFQDSSQWLQIDLKEIKVISGILTQGHCDIDEWMTKY 128 Query: 90 KIRYSLDNV-SWFEYR----NGAAVTGVTDRNTVVNHFFDTPIRARSIAIHPLTWNGHIS 144 ++Y D +W Y+ N G +DR + V + PI +R I + PL W+ I+ Sbjct: 129 SVQYRTDERLNWIYYKDQTGNNRVFYGNSDRTSTVQNLLRPPIISRFIRLIPLGWHVRIA 188 Query: 145 LRCEF 149 +R E Sbjct: 189 IRMEL 193 >1SDD-B nrPDB Length = 647 Score = 140 bits (352), Expect = 6e-34, Method: Composition-based stats. Identities = 38/150 (25%), Positives = 60/150 (40%), Gaps = 16/150 (10%) Query: 10 LANAQCHLRT--STNYNGVHTQFNSALNYKNNGTNTIDGSEAWCSSIVDTNQYIVAGCEV 67 + N Q + + + F + LN + N AW + + NQ++ Sbjct: 500 IENKQITASSFKKSWWGNYWEPFLARLNAQ-GRVN------AWQAKANNNNQWLQIDLLK 552 Query: 68 PRTFMCVALQG--RGDADQWVTSYKIRYSLDNVSWFEYRNGA-----AVTGVTDRNTVVN 120 + + QG ++ +V SY I YS W YR + G + V Sbjct: 553 IKKITAIVTQGCKSLSSEMYVKSYTIHYSDQGTDWKPYREKSSMVDKIFEGNNNVRGHVK 612 Query: 121 HFFDTPIRARSIAIHPLTWNGHISLRCEFY 150 +FF+ PI +R I I P TWN I+LR E + Sbjct: 613 NFFNPPIISRFIRIIPKTWNQSIALRLELF 642 Score = 89.8 bits (221), Expect = 1e-18, Method: Composition-based stats. Identities = 36/183 (19%), Positives = 65/183 (35%), Gaps = 13/183 (7%) Query: 6 LVQLLANAQCHLRTSTNYNGVHTQFNSALNYKNNGTNTIDGSEAWCSSIVDTNQYIVAGC 65 L+A++Q + L NNG + S+ + +I Sbjct: 337 STGLIADSQIQASE------FWGYWEPKLARLNNGGSYNAWIAEKLSTEFNPEPWIQVDM 390 Query: 66 EVPRTFMCVALQGRGDADQ--WVTSYKIRYSLDNVSWFEYRNGAA-----VTGVTDRNTV 118 + + QG + + T + + YSLD +W ++ + G +D +T+ Sbjct: 391 QKEVLLTGIQTQGAKHYLKPYYTTEFCVAYSLDRKNWRIFKGNSTRNVMYFGGNSDASTI 450 Query: 119 VNHFFDTPIRARSIAIHPLTWNGHISLRCEFYTQPVQSSVTQVGADIYTGDNCALNTGSG 178 + D P+ AR I I P +LR E V T +G + +N + S Sbjct: 451 KENQIDPPVVARYIRISPTGSYNKPALRLELQGCEVNGCSTPLGMESGKIENKQITASSF 510 Query: 179 KRE 181 K+ Sbjct: 511 KKS 513 >5K8D-B nrPDB Length = 865 Score = 115 bits (289), Expect = 1e-26, Method: Composition-based stats. Identities = 33/153 (21%), Positives = 60/153 (39%), Gaps = 16/153 (10%) Query: 19 TSTNYNGVHTQFNSALNYKNNGTNTIDGSEAWCSSIVDTNQYIVAGCEVPRTFMCVALQG 78 T++ G + L+Y + AW + + +I P + QG Sbjct: 345 TASGQYGQWAPKLARLHYSGS-------INAWSTKEPFS--WIKVDLLAPMIIHGIKTQG 395 Query: 79 RGD--ADQWVTSYKIRYSLDNVSWFEYRNGA-----AVTGVTDRNTVVNHFFDTPIRARS 131 + +++ + I YSLD W YR + G D + + ++ F+ PI AR Sbjct: 396 ARQKFSSLYISQFIIMYSLDGKKWQTYRGNSTGTLMVFFGNVDSSGIKHNIFNPPIIARY 455 Query: 132 IAIHPLTWNGHISLRCEFYTQPVQSSVTQVGAD 164 I +HP ++ +LR E + S +G + Sbjct: 456 IRLHPTHYSIRSTLRMELMGCDLNSCSMPLGME 488 Score = 100 bits (249), Expect = 5e-22, Method: Composition-based stats. Identities = 33/146 (22%), Positives = 56/146 (38%), Gaps = 13/146 (8%) Query: 10 LANAQCHLRTS-TNYNGVHTQFNSALNYKNNGTNTIDGSEAWCSSIVDTNQYIVAGCEVP 68 +++AQ + TN + + L+ + S AW + + +++ + Sbjct: 492 ISDAQITASSYFTNMFATWSPSKARLHLQGR-------SNAWRPQVNNPKEWLQVDFQKT 544 Query: 69 RTFMCVALQG--RGDADQWVTSYKIRYSLDNVSW-FEYRNGAA--VTGVTDRNTVVNHFF 123 V QG +V + I S D W ++NG G D T V + Sbjct: 545 MKVTGVTTQGVKSLLTSMYVKEFLISSSQDGHQWTLFFQNGKVKVFQGNQDSFTPVVNSL 604 Query: 124 DTPIRARSIAIHPLTWNGHISLRCEF 149 D P+ R + IHP +W I+LR E Sbjct: 605 DPPLLTRYLRIHPQSWVHQIALRMEV 630 >4BDV-B nrPDB Length = 685 Score = 115 bits (287), Expect = 2e-26, Method: Composition-based stats. Identities = 33/153 (21%), Positives = 60/153 (39%), Gaps = 16/153 (10%) Query: 19 TSTNYNGVHTQFNSALNYKNNGTNTIDGSEAWCSSIVDTNQYIVAGCEVPRTFMCVALQG 78 T++ G + L+Y + AW + + +I P + QG Sbjct: 391 TASGQYGQWAPKLARLHYSGS-------INAWSTKEPFS--WIKVDLLAPMIIHGIKTQG 441 Query: 79 RGD--ADQWVTSYKIRYSLDNVSWFEYRNGA-----AVTGVTDRNTVVNHFFDTPIRARS 131 + +++ + I YSLD W YR + G D + + ++ F+ PI AR Sbjct: 442 ARQKFSSLYISQFIIMYSLDGKKWQTYRGNSTGTLMVFFGNVDSSGIKHNIFNPPIIARY 501 Query: 132 IAIHPLTWNGHISLRCEFYTQPVQSSVTQVGAD 164 I +HP ++ +LR E + S +G + Sbjct: 502 IRLHPTHYSIRSTLRMELMGCDLNSCSMPLGME 534 Score = 100 bits (248), Expect = 8e-22, Method: Composition-based stats. Identities = 33/146 (22%), Positives = 56/146 (38%), Gaps = 13/146 (8%) Query: 10 LANAQCHLRTS-TNYNGVHTQFNSALNYKNNGTNTIDGSEAWCSSIVDTNQYIVAGCEVP 68 +++AQ + TN + + L+ + S AW + + +++ + Sbjct: 538 ISDAQITASSYFTNMFATWSPSKARLHLQGR-------SNAWRPQVNNPKEWLQVDFQKT 590 Query: 69 RTFMCVALQG--RGDADQWVTSYKIRYSLDNVSW-FEYRNGAA--VTGVTDRNTVVNHFF 123 V QG +V + I S D W ++NG G D T V + Sbjct: 591 MKVTGVTTQGVKSLLTSMYVKEFLISSSQDGHQWTLFFQNGKVKVFQGNQDSFTPVVNSL 650 Query: 124 DTPIRARSIAIHPLTWNGHISLRCEF 149 D P+ R + IHP +W I+LR E Sbjct: 651 DPPLLTRYLRIHPQSWVHQIALRMEV 676 >2R7E-B nrPDB Length = 770 Score = 114 bits (286), Expect = 3e-26, Method: Composition-based stats. Identities = 33/153 (21%), Positives = 60/153 (39%), Gaps = 16/153 (10%) Query: 19 TSTNYNGVHTQFNSALNYKNNGTNTIDGSEAWCSSIVDTNQYIVAGCEVPRTFMCVALQG 78 T++ G + L+Y + AW + + +I P + QG Sbjct: 476 TASGQYGQWAPKLARLHYSGS-------INAWSTKEPFS--WIKVDLLAPMIIHGIKTQG 526 Query: 79 RGD--ADQWVTSYKIRYSLDNVSWFEYRNGA-----AVTGVTDRNTVVNHFFDTPIRARS 131 + +++ + I YSLD W YR + G D + + ++ F+ PI AR Sbjct: 527 ARQKFSSLYISQFIIMYSLDGKKWQTYRGNSTGTLMVFFGNVDSSGIKHNIFNPPIIARY 586 Query: 132 IAIHPLTWNGHISLRCEFYTQPVQSSVTQVGAD 164 I +HP ++ +LR E + S +G + Sbjct: 587 IRLHPTHYSIRSTLRMELMGCDLNSCSMPLGME 619 Score = 99.8 bits (247), Expect = 9e-22, Method: Composition-based stats. Identities = 33/146 (22%), Positives = 56/146 (38%), Gaps = 13/146 (8%) Query: 10 LANAQCHLRTS-TNYNGVHTQFNSALNYKNNGTNTIDGSEAWCSSIVDTNQYIVAGCEVP 68 +++AQ + TN + + L+ + S AW + + +++ + Sbjct: 623 ISDAQITASSYFTNMFATWSPSKARLHLQGR-------SNAWRPQVNNPKEWLQVDFQKT 675 Query: 69 RTFMCVALQG--RGDADQWVTSYKIRYSLDNVSW-FEYRNGAA--VTGVTDRNTVVNHFF 123 V QG +V + I S D W ++NG G D T V + Sbjct: 676 MKVTGVTTQGVKSLLTSMYVKEFLISSSQDGHQWTLFFQNGKVKVFQGNQDSFTPVVNSL 735 Query: 124 DTPIRARSIAIHPLTWNGHISLRCEF 149 D P+ R + IHP +W I+LR E Sbjct: 736 DPPLLTRYLRIHPQSWVHQIALRMEV 761 >4DEQ-A nrPDB Length = 218 Score = 99.4 bits (246), Expect = 1e-21, Method: Composition-based stats. Identities = 37/155 (23%), Positives = 53/155 (34%), Gaps = 16/155 (10%) Query: 16 HLRTSTNYNGVHTQFNSALNYKNNGTNTIDGSEAWCSSIVDTNQYIVAGCEVPRTFMCVA 75 + S+ Y+ + S LNY NG W ++I + R V Sbjct: 21 QITASSQYSTNWSAERSRLNYPENG---------WTPGEDSYREWIQVDLGLLRFVTAVG 71 Query: 76 LQGRGDADQWVTSYK----IRYSLDNVSWFEYRNGA---AVTGVTDRNTVVNHFFDTPIR 128 QG + Y I S + W + G G T+ VV F P+ Sbjct: 72 TQGAISKETKKKYYVKTYKIDVSSNGEDWITIKEGNKPVLFQGNTNPTDVVVAVFPKPLI 131 Query: 129 ARSIAIHPLTWNGHISLRCEFYTQPVQSSVTQVGA 163 R + I P TW IS+R E Y + V G+ Sbjct: 132 TRFVRIKPATWETGISMRFEVYGCKITDYVDGSGS 166 >2CGZ-A nrPDB Length = 101 Score = 41.2 bits (95), Expect = 4e-04, Method: Composition-based stats. Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 1/73 (1%) Query: 179 KREVVVPVKFQFEFATLPKVALNFDQIDCTDATNQTRIGVQPRNITTKGFDCVFYTWNEN 238 RE+ + F + P V L+ Q+D + N R+ + +++ GF YTW+ Sbjct: 28 TRELAKNITFASPYCRPPVVLLSITQLDVEQSQN-LRVIARLYSVSPTGFKASCYTWHNT 86 Query: 239 KVYSLRADYIATA 251 KVYS+ +I+ Sbjct: 87 KVYSMSISWISIE 99 >2DC0-A nrPDB Length = 434 Score = 33.5 bits (75), Expect = 0.097, Method: Composition-based stats. Identities = 15/71 (21%), Positives = 27/71 (38%), Gaps = 6/71 (8%) Query: 142 HISLRCEFYT-----QPVQSSVTQVGADIYTGDNCALNTG-SGKREVVVPVKFQFEFATL 195 +LR E + V + A + L +G G RE + + F + Sbjct: 334 REALRLELVKALRGVDALLLPVQPLPAPPLGTEEVELESGRKGHREAFITLTLPFSLLGV 393 Query: 196 PKVALNFDQID 206 P +AL F +++ Sbjct: 394 PTLALPFAKVE 404 >6A0L-A nrPDB Length = 471 Score = 29.7 bits (65), Expect = 1.1, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 19/42 (45%) Query: 74 VALQGRGDADQWVTSYKIRYSLDNVSWFEYRNGAAVTGVTDR 115 V + GD + + SY + +SL+ Y + +TG D Sbjct: 322 VLTRHAGDVEAALLSYALLFSLEGAPMVYYGDEVGLTGDNDP 363 >4TQO-B nrPDB Length = 573 Score = 29.7 bits (65), Expect = 1.2, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 24/58 (41%), Gaps = 8/58 (13%) Query: 141 GHISLRCEFYTQPVQSSVTQVGADIY--------TGDNCALNTGSGKREVVVPVKFQF 190 HI + E + P ++ VGA + G A+N +GK E VP KF Sbjct: 411 NHICMDWEPFMLPYRAGQFFVGATLNMYPGPKGMLGQVKAMNAVTGKMEWEVPEKFAV 468 >3HB6-A nrPDB Length = 484 Score = 29.7 bits (65), Expect = 1.2, Method: Composition-based stats. Identities = 10/85 (11%), Positives = 30/85 (35%), Gaps = 7/85 (8%) Query: 67 VPRTFMCVALQGRGDADQWVTSYKIRYSLDNVSWFEYRNGAAVTGVTDRNTVVNHFFDTP 126 R +G DA++ + + +++ + +W + G + P Sbjct: 89 FARFSTVAGERGAADAERDIRGFALKFYTEEGNW-------DMVGNNTPVFYLRDPLKFP 141 Query: 127 IRARSIAIHPLTWNGHISLRCEFYT 151 + P T +++ + +F++ Sbjct: 142 DLNHIVKRDPRTNMRNMAYKWDFFS 166 >1K12-A nrPDB Length = 158 Score = 29.3 bits (64), Expect = 1.7, Method: Composition-based stats. Identities = 12/65 (18%), Positives = 19/65 (29%) Query: 17 LRTSTNYNGVHTQFNSALNYKNNGTNTIDGSEAWCSSIVDTNQYIVAGCEVPRTFMCVAL 76 S G H + A N + ++ + S N + T V + Sbjct: 17 ATQSAQLRGEHAANSEASNAIDGNRDSNFYHGSCTHSSGQANPWWRVDLLQVYTITSVTI 76 Query: 77 QGRGD 81 RGD Sbjct: 77 TNRGD 81 >2HVY-B nrPDB Length = 104 Score = 28.9 bits (63), Expect = 2.1, Method: Composition-based stats. Identities = 13/75 (17%), Positives = 23/75 (30%), Gaps = 6/75 (8%) Query: 91 IRYSLDN-----VSWFEYRNGAAVTGVTDRNTVVNHFFDTPIRARSIAIHPLTWNGHISL 145 + Y+ +W N V +V F P++ +AI P N I + Sbjct: 15 LHYAKQGFLIVRTNWVPSLNDRVVDKRLQFVGIVKDVFG-PVKMPYVAIKPKVSNPEIYV 73 Query: 146 RCEFYTQPVQSSVTQ 160 Y + + Sbjct: 74 GEVLYVDERKRKESP 88 >2EY4-C nrPDB Length = 82 Score = 28.5 bits (62), Expect = 2.7, Method: Composition-based stats. Identities = 13/67 (19%), Positives = 21/67 (31%), Gaps = 6/67 (8%) Query: 91 IRYSLDN-----VSWFEYRNGAAVTGVTDRNTVVNHFFDTPIRARSIAIHPLTWNGHISL 145 + Y+ +W N V +V F P++ +AI P N I + Sbjct: 15 LHYAKQGFLIVRTNWVPSLNDRVVDKRLQFVGIVKDVFG-PVKMPYVAIKPKVSNPEIYV 73 Query: 146 RCEFYTQ 152 Y Sbjct: 74 GEVLYVD 80 >4URI-A nrPDB Length = 337 Score = 27.8 bits (60), Expect = 4.5, Method: Composition-based stats. Identities = 8/54 (14%), Positives = 17/54 (31%), Gaps = 11/54 (20%) Query: 69 RTFMCVALQGRGDAD-----------QWVTSYKIRYSLDNVSWFEYRNGAAVTG 111 A QG G ++ ++Y Y W+ Y + +++ Sbjct: 248 HGLFAPATQGLGAVKYKDIVNTGGQVEFDSTYVTNYRFKGTDWYGYDDTQSISA 301 >6CJJ-A nrPDB Length = 230 Score = 27.8 bits (60), Expect = 5.1, Method: Composition-based stats. Identities = 16/87 (18%), Positives = 27/87 (31%) Query: 131 SIAIHPLTWNGHISLRCEFYTQPVQSSVTQVGADIYTGDNCALNTGSGKREVVVPVKFQF 190 I I P + +R V +G +G + S +V + +F Sbjct: 78 FIRIIPQKDQKVLEIRDSGIGMTKADLVNNLGTIAKSGTKSFMEALSAGADVSMIGQFGV 137 Query: 191 EFATLPKVALNFDQIDCTDATNQTRIG 217 F +L VA + I + Q Sbjct: 138 GFYSLFLVADHVQVISKHNDDEQYVWE 164 >1EUU-A nrPDB Length = 605 Score = 27.4 bits (59), Expect = 6.8, Method: Composition-based stats. Identities = 15/79 (18%), Positives = 28/79 (35%), Gaps = 5/79 (6%) Query: 61 IVAGCEVPRTFMCVA-LQGRGDADQWVTSYKIRYSLDNVSWFEYRNGAAVTGVTDRNTVV 119 I T + + + A++ V Y+I SL+ +W +G +G + Sbjct: 512 ISLDLGGTHTISGLQYTRRQNSANEQVADYEIYTSLNGTTW----DGPVASGRFTTSLAP 567 Query: 120 NHFFDTPIRARSIAIHPLT 138 AR I + L+ Sbjct: 568 QRAVFPARDARYIRLVALS 586 >1K3I-A nrPDB Length = 656 Score = 27.0 bits (58), Expect = 7.5, Method: Composition-based stats. Identities = 24/146 (16%), Positives = 46/146 (31%), Gaps = 17/146 (11%) Query: 4 QGLVQLLANAQCHLRTSTNYNGVHTQFNSALNYKNNGTNTIDG--SEAWCSSI-----VD 56 +G +Q L+ S + N IDG W + Sbjct: 8 EGSLQFLSLRASAPIGSAISRNNWAVTCDSAQSGNECNKAIDGNKDTFWHTFYGANGDPK 67 Query: 57 TNQYIVAGCEVPRTFMCVALQGRGDADQ--WVTSYKIRYSLDNVSWFEYRNGAAVTGV-- 112 + + +++ R D +Q W+ +++ S D +W +G Sbjct: 68 PPHTYTIDMKTTQNVNGLSMLPRQDGNQNGWIGRHEVYLSSDGTNW----GSPVASGSWF 123 Query: 113 TDRNTVVNHFFDTPIRARSIAIHPLT 138 D T ++F P AR + + +T Sbjct: 124 ADSTTKYSNFETRP--ARYVRLVAIT 147 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.312 0.130 0.354 Lambda K H 0.267 0.0398 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 9,316,886 Number of Sequences: 36641 Number of extensions: 356180 Number of successful extensions: 824 Number of sequences better than 10.0: 28 Number of HSP's better than 10.0 without gapping: 33 Number of HSP's successfully gapped in prelim test: 12 Number of HSP's that attempted gapping in prelim test: 732 Number of HSP's gapped (non-prelim): 57 length of query: 253 length of database: 10,336,785 effective HSP length: 95 effective length of query: 158 effective length of database: 6,855,890 effective search space: 1083230620 effective search space used: 1083230620 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.4 bits) S2: 58 (27.0 bits)