BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= P02775 (128 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 1F9P-A nrPDB 175 4e-45 1NAP-A nrPDB 143 2e-35 1MSH-A nrPDB 91 1e-19 2MGS-A nrPDB 87 2e-18 5OB5-A nrPDB 81 1e-16 1MI2-A nrPDB 80 2e-16 1PFN-A nrPDB 80 3e-16 1PLF-A nrPDB 79 6e-16 1ROD-A nrPDB 77 2e-15 4XDX-A nrPDB 69 4e-13 1LV9-A nrPDB 47 2e-06 5CBA-E nrPDB 43 3e-05 2R3Z-A nrPDB 37 0.002 1RJT-A nrPDB 34 0.020 5L7M-A nrPDB 32 0.088 1ZXT-A nrPDB 32 0.099 2HDL-A nrPDB 31 0.17 6EHZ-A nrPDB 31 0.17 4ZKB-B nrPDB 30 0.20 2MP1-A nrPDB 30 0.24 1G2S-A nrPDB 30 0.27 4LMQ-D nrPDB 30 0.32 2K04-A nrPDB 28 1.2 1M32-A nrPDB 28 1.4 4MHE-A nrPDB 27 1.9 2HCC-A nrPDB 27 1.9 5UIU-A nrPDB 26 3.9 1NR4-A nrPDB 26 4.0 1HHV-A nrPDB 26 4.4 5ENY-A nrPDB 25 6.2 4RWS-C nrPDB 25 6.8 >1F9P-A nrPDB Length = 85 Score = 175 bits (444), Expect = 4e-45, Method: Compositional matrix adjust. Identities = 85/85 (100%), Positives = 85/85 (100%) Query: 44 NLAKGKEESLDSDLYAELRCMCIKTTSGIHPKNIQSLEVIGKGTHCNQVEVIATLKDGRK 103 NLAKGKEESLDSDLYAELRCMCIKTTSGIHPKNIQSLEVIGKGTHCNQVEVIATLKDGRK Sbjct: 1 NLAKGKEESLDSDLYAELRCMCIKTTSGIHPKNIQSLEVIGKGTHCNQVEVIATLKDGRK 60 Query: 104 ICLDPDAPRIKKIVQKKLAGDESAD 128 ICLDPDAPRIKKIVQKKLAGDESAD Sbjct: 61 ICLDPDAPRIKKIVQKKLAGDESAD 85 >1NAP-A nrPDB Length = 70 Score = 143 bits (361), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 69/70 (98%), Positives = 70/70 (100%) Query: 59 AELRCMCIKTTSGIHPKNIQSLEVIGKGTHCNQVEVIATLKDGRKICLDPDAPRIKKIVQ 118 AELRC+CIKTTSGIHPKNIQSLEVIGKGTHCNQVEVIATLKDGRKICLDPDAPRIKKIVQ Sbjct: 1 AELRCLCIKTTSGIHPKNIQSLEVIGKGTHCNQVEVIATLKDGRKICLDPDAPRIKKIVQ 60 Query: 119 KKLAGDESAD 128 KKLAGDESAD Sbjct: 61 KKLAGDESAD 70 >1MSH-A nrPDB Length = 72 Score = 90.9 bits (224), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 41/72 (56%), Positives = 53/72 (73%) Query: 55 SDLYAELRCMCIKTTSGIHPKNIQSLEVIGKGTHCNQVEVIATLKDGRKICLDPDAPRIK 114 + + ELRC C++T GIHPKNIQS+ V G HC Q EVIATLK+GRK CL+P +P +K Sbjct: 1 ASVATELRCQCLQTLQGIHPKNIQSVNVKSPGPHCAQTEVIATLKNGRKACLNPASPIVK 60 Query: 115 KIVQKKLAGDES 126 KI++K L D+S Sbjct: 61 KIIEKMLNSDKS 72 >2MGS-A nrPDB Length = 78 Score = 87.0 bits (214), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 36/64 (56%), Positives = 53/64 (82%) Query: 60 ELRCMCIKTTSGIHPKNIQSLEVIGKGTHCNQVEVIATLKDGRKICLDPDAPRIKKIVQK 119 ELRC+C++TT G+HPK I +L+V G C++VEV+A+LK+G++ICLDP+AP +KK++QK Sbjct: 10 ELRCVCLQTTQGVHPKMISNLQVFAIGPQCSKVEVVASLKNGKEICLDPEAPFLKKVIQK 69 Query: 120 KLAG 123 L G Sbjct: 70 ILDG 73 >5OB5-A nrPDB Length = 63 Score = 80.9 bits (198), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 37/62 (59%), Positives = 48/62 (77%) Query: 60 ELRCMCIKTTSGIHPKNIQSLEVIGKGTHCNQVEVIATLKDGRKICLDPDAPRIKKIVQK 119 ELRC C++T GIH KNIQS++V G HC Q EVIATLK+G+K CL+P +P +KKI++K Sbjct: 1 ELRCQCLQTLQGIHLKNIQSVKVKSPGPHCAQTEVIATLKNGQKACLNPASPMVKKIIEK 60 Query: 120 KL 121 L Sbjct: 61 ML 62 >1MI2-A nrPDB Length = 73 Score = 80.5 bits (197), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 38/65 (58%), Positives = 48/65 (73%) Query: 57 LYAELRCMCIKTTSGIHPKNIQSLEVIGKGTHCNQVEVIATLKDGRKICLDPDAPRIKKI 116 + +ELRC C+KT + KNIQSL V G HC Q EVIATLK G+K+CLDP+AP ++KI Sbjct: 3 VASELRCQCLKTLPRVDFKNIQSLSVTPPGPHCAQTEVIATLKGGQKVCLDPEAPLVQKI 62 Query: 117 VQKKL 121 +QK L Sbjct: 63 IQKIL 67 >1PFN-A nrPDB Length = 68 Score = 80.1 bits (196), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 38/62 (61%), Positives = 47/62 (75%) Query: 60 ELRCMCIKTTSGIHPKNIQSLEVIGKGTHCNQVEVIATLKDGRKICLDPDAPRIKKIVQK 119 ELRC C+KTTS + P++I SLEVI G HC ++IATLK+GRKICLD AP KKI++K Sbjct: 5 ELRCQCVKTTSQVRPRHITSLEVIKAGPHCPTAQLIATLKNGRKICLDLQAPLYKKIIKK 64 Query: 120 KL 121 L Sbjct: 65 LL 66 >1PLF-A nrPDB Length = 72 Score = 79.0 bits (193), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 37/62 (59%), Positives = 49/62 (79%) Query: 60 ELRCMCIKTTSGIHPKNIQSLEVIGKGTHCNQVEVIATLKDGRKICLDPDAPRIKKIVQK 119 +L+C+C+KTTSGI+P++I SLEVIG G HC ++IATLK GRKICLD P KKI+++ Sbjct: 9 DLQCVCLKTTSGINPRHISSLEVIGAGLHCPSPQLIATLKTGRKICLDQQNPLYKKIIKR 68 Query: 120 KL 121 L Sbjct: 69 LL 70 >1ROD-A nrPDB Length = 72 Score = 77.4 bits (189), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 37/68 (54%), Positives = 46/68 (67%), Gaps = 1/68 (1%) Query: 60 ELRCMCIKTTSG-IHPKNIQSLEVIGKGTHCNQVEVIATLKDGRKICLDPDAPRIKKIVQ 118 ELRC CIKT S HPK I+ L VI G HC E+I L DGR++CLDP +P +KKI++ Sbjct: 4 ELRCQCIKTYSKPFHPKFIKELRVIESGPHCANTEIIVKLSDGRELCLDPASPIVKKIIE 63 Query: 119 KKLAGDES 126 K L D+S Sbjct: 64 KMLNSDKS 71 >4XDX-A nrPDB Length = 70 Score = 69.3 bits (168), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 33/69 (47%), Positives = 44/69 (63%), Gaps = 1/69 (1%) Query: 60 ELRCMCIKTTSG-IHPKNIQSLEVIGKGTHCNQVEVIATLKDGRKICLDPDAPRIKKIVQ 118 ELRC CIKT S HPK I+ L VI G HC E+I L DGR++CLDP ++++V+ Sbjct: 2 ELRCQCIKTYSKPFHPKFIKELRVIESGPHCANTEIIVKLSDGRELCLDPKENWVQRVVE 61 Query: 119 KKLAGDESA 127 K L E++ Sbjct: 62 KFLKRAENS 70 >1LV9-A nrPDB Length = 77 Score = 47.0 bits (110), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 23/64 (35%), Positives = 42/64 (65%), Gaps = 2/64 (3%) Query: 57 LYAELRCMCIKTTS-GIHPKNIQSLEVIGKGTHCNQVEVIATL-KDGRKICLDPDAPRIK 114 L +RC CI ++ ++P++++ LE+I C +VE+IAT+ K G K CL+P++ IK Sbjct: 3 LSRTVRCTCISISNQPVNPRSLEKLEIIPASQFCPRVEIIATMKKKGEKRCLNPESKAIK 62 Query: 115 KIVQ 118 +++ Sbjct: 63 NLLK 66 >5CBA-E nrPDB Length = 88 Score = 43.1 bits (100), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 18/62 (29%), Positives = 37/62 (59%), Gaps = 1/62 (1%) Query: 58 YAELRCMCIKTTSGIHPKN-IQSLEVIGKGTHCNQVEVIATLKDGRKICLDPDAPRIKKI 116 Y LRC C++ +S P+ I ++++ +G C + E+I K+ +C+DP A I+++ Sbjct: 7 YTSLRCRCVQESSVFIPRRFIDRIQILPRGNGCPRKEIIVWKKNKSIVCVDPQAEWIQRM 66 Query: 117 VQ 118 ++ Sbjct: 67 ME 68 >2R3Z-A nrPDB Length = 68 Score = 37.0 bits (84), Expect = 0.002, Method: Compositional matrix adjust. Identities = 22/64 (34%), Positives = 37/64 (57%), Gaps = 2/64 (3%) Query: 57 LYAELRCMCIKTTSG-IHPKNIQSLEVIGKGTHCNQVEVIATL-KDGRKICLDPDAPRIK 114 L +RC CI G + + I LE+I C +VE+IAT+ K+ + CL+P++ IK Sbjct: 3 LARTVRCNCIHIDDGPVRMRAIGKLEIIPASLSCPRVEIIATMKKNDEQRCLNPESKTIK 62 Query: 115 KIVQ 118 +++ Sbjct: 63 NLMK 66 >1RJT-A nrPDB Length = 73 Score = 33.9 bits (76), Expect = 0.020, Method: Compositional matrix adjust. Identities = 17/65 (26%), Positives = 38/65 (58%), Gaps = 2/65 (3%) Query: 57 LYAELRCMCIKT-TSGIHPKNIQSLEVIGKGTHCNQVEVIATLKDGR-KICLDPDAPRIK 114 ++ RC+CI + +I+ ++ +C+++EVI TLK+ + + CL+P + + + Sbjct: 3 MFKRGRCLCIGPGVKAVKVADIEKASIMYPSNNCDKIEVIITLKENKGQRCLNPKSKQAR 62 Query: 115 KIVQK 119 I++K Sbjct: 63 LIIKK 67 >5L7M-A nrPDB Length = 88 Score = 31.6 bits (70), Expect = 0.088, Method: Compositional matrix adjust. Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 5/64 (7%) Query: 58 YAELRCMC---IKTTSGIHPKNIQSLEVIGKGTHCNQVEVIATLKDGRKICLDPDAPRIK 114 Y L+C C I T G++ I ++V G C + EV+ K + IC++P A ++ Sbjct: 6 YTNLKCRCSGVISTVVGLN--IIDRIQVTPPGNGCPKTEVVIWTKMKKVICVNPRAKWLQ 63 Query: 115 KIVQ 118 ++++ Sbjct: 64 RLLR 67 >1ZXT-A nrPDB Length = 76 Score = 31.6 bits (70), Expect = 0.099, Method: Compositional matrix adjust. Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 1/48 (2%) Query: 73 HPKNIQSL-EVIGKGTHCNQVEVIATLKDGRKICLDPDAPRIKKIVQK 119 HP +Q L E C + VI K GR+IC DP +++++Q+ Sbjct: 18 HPPPVQILKEWYPTSPACPKPGVILLTKRGRQICADPSKNWVRQLMQR 65 >2HDL-A nrPDB Length = 78 Score = 30.8 bits (68), Expect = 0.17, Method: Compositional matrix adjust. Identities = 19/69 (27%), Positives = 32/69 (46%), Gaps = 5/69 (7%) Query: 62 RCMCIKTTSGIHPKNIQSLEVIGKGTHCNQVEVIATLKD-----GRKICLDPDAPRIKKI 116 +C C + I +++ LE+ K HC + VI T K G++ CL P K+ Sbjct: 3 KCKCSRKGPKIRYSDVKKLEMKPKYPHCEEKMVIITTKSVSRYRGQEHCLHPKLQSTKRF 62 Query: 117 VQKKLAGDE 125 ++ A +E Sbjct: 63 IKWYNAWNE 71 >6EHZ-A nrPDB Length = 98 Score = 30.8 bits (68), Expect = 0.17, Method: Compositional matrix adjust. Identities = 18/62 (29%), Positives = 36/62 (58%), Gaps = 3/62 (4%) Query: 61 LRCMCIKTTSGIHPKNIQSLEVIGKGTHCNQVEVIATLKDG-RKICLDPDAPRIKKIVQK 119 RC C S I N++ L+++ +C ++++A LK+ R++C+DP I++ ++K Sbjct: 7 YRCPCRFFESHIARANVKHLKILN-TPNC-ALQIVARLKNNNRQVCIDPKLKWIQEYLEK 64 Query: 120 KL 121 L Sbjct: 65 AL 66 >4ZKB-B nrPDB Length = 75 Score = 30.4 bits (67), Expect = 0.20, Method: Compositional matrix adjust. Identities = 15/53 (28%), Positives = 25/53 (47%), Gaps = 1/53 (1%) Query: 65 CIKTTSGIHPKNIQSLEVIGKGTHCNQVEVIATLKDGRKICLDPDAPRIKKIV 117 C TS P+N + + + C++ VI K R++C DP ++K V Sbjct: 11 CFSYTSRQIPQNFIA-DYFETSSQCSKPGVIFLTKRSRQVCADPSEEWVQKYV 62 >2MP1-A nrPDB Length = 77 Score = 30.4 bits (67), Expect = 0.24, Method: Compositional matrix adjust. Identities = 11/31 (35%), Positives = 19/31 (61%) Query: 89 CNQVEVIATLKDGRKICLDPDAPRIKKIVQK 119 C V+ T GR++C PD P +++I+Q+ Sbjct: 34 CRVPAVVFTTLRGRQLCAPPDQPWVERIIQR 64 >1G2S-A nrPDB Length = 71 Score = 30.0 bits (66), Expect = 0.27, Method: Compositional matrix adjust. Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 6/46 (13%) Query: 77 IQSLEVIGKGTHCNQVEVIATLKDGRKICLDPDAPRIKKIVQKKLA 122 ++S E C+Q VI T K G+K+C P KK VQK ++ Sbjct: 24 VRSYEFTSNS--CSQRAVIFTTKRGKKVCTHPR----KKWVQKYIS 63 >4LMQ-D nrPDB Length = 61 Score = 29.6 bits (65), Expect = 0.32, Method: Compositional matrix adjust. Identities = 17/61 (27%), Positives = 36/61 (59%), Gaps = 3/61 (4%) Query: 62 RCMCIKTTSGIHPKNIQSLEVIGKGTHCNQVEVIATLKDG-RKICLDPDAPRIKKIVQKK 120 RC C S + N++ L+++ +C ++++A LK+ R++C+DP I++ ++K Sbjct: 1 RCPCRFFESHVARANVKHLKILN-TPNC-ALQIVARLKNNNRQVCIDPKLKWIQEYLEKA 58 Query: 121 L 121 L Sbjct: 59 L 59 >2K04-A nrPDB Length = 70 Score = 28.1 bits (61), Expect = 1.2, Method: Compositional matrix adjust. Identities = 17/62 (27%), Positives = 35/62 (56%), Gaps = 3/62 (4%) Query: 61 LRCMCIKTTSGIHPKNIQSLEVIGKGTHCNQVEVIATLKDG-RKICLDPDAPRIKKIVQK 119 RC C S + N++ L+++ +C +++A LK+ R++C+DP I++ ++K Sbjct: 9 YRCPCRFFESHVARANVKHLKILN-TPNC-ACQIVARLKNNNRQVCIDPKLKWIQEYLEK 66 Query: 120 KL 121 L Sbjct: 67 CL 68 >1M32-A nrPDB Length = 366 Score = 27.7 bits (60), Expect = 1.4, Method: Compositional matrix adjust. Identities = 11/18 (61%), Positives = 12/18 (66%) Query: 47 KGKEESLDSDLYAELRCM 64 KG SL DLYA+ RCM Sbjct: 215 KGHSRSLSLDLYAQWRCM 232 >4MHE-A nrPDB Length = 70 Score = 27.3 bits (59), Expect = 1.9, Method: Compositional matrix adjust. Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 4/35 (11%) Query: 88 HCNQVEVIATLKDGRKICLDPDAPRIKKIVQKKLA 122 C + VI K GR+IC DP+ KK VQK ++ Sbjct: 34 QCPKPGVILLTKRGRQICADPN----KKWVQKYIS 64 >2HCC-A nrPDB Length = 66 Score = 27.3 bits (59), Expect = 1.9, Method: Compositional matrix adjust. Identities = 10/33 (30%), Positives = 19/33 (57%) Query: 87 THCNQVEVIATLKDGRKICLDPDAPRIKKIVQK 119 + C++ VI K GR++C P P ++ ++K Sbjct: 28 SECSKPGVIFLTKKGRQVCAKPSGPGVQDCMKK 60 >5UIU-A nrPDB Length = 323 Score = 26.2 bits (56), Expect = 3.9, Method: Compositional matrix adjust. Identities = 15/46 (32%), Positives = 23/46 (50%) Query: 61 LRCMCIKTTSGIHPKNIQSLEVIGKGTHCNQVEVIATLKDGRKICL 106 L M TT + + Q ++V+ K H N VE++ DG +CL Sbjct: 78 LAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCL 123 >1NR4-A nrPDB Length = 71 Score = 26.2 bits (56), Expect = 4.0, Method: Compositional matrix adjust. Identities = 10/30 (33%), Positives = 17/30 (56%) Query: 89 CNQVEVIATLKDGRKICLDPDAPRIKKIVQ 118 C++ ++ GR IC DP+ R+K V+ Sbjct: 34 CSRDAIVFVTVQGRAICSDPNNKRVKNAVK 63 >1HHV-A nrPDB Length = 74 Score = 26.2 bits (56), Expect = 4.4, Method: Compositional matrix adjust. Identities = 11/31 (35%), Positives = 19/31 (61%) Query: 89 CNQVEVIATLKDGRKICLDPDAPRIKKIVQK 119 C++ VI K GR++C D +KK++Q+ Sbjct: 38 CSKPGVIFLTKRGRQVCADKSKDWVKKLMQQ 68 >5ENY-A nrPDB Length = 764 Score = 25.4 bits (54), Expect = 6.2, Method: Composition-based stats. Identities = 11/22 (50%), Positives = 15/22 (68%) Query: 66 IKTTSGIHPKNIQSLEVIGKGT 87 I T GIHP++I +E+ G GT Sbjct: 460 IYETYGIHPESISYVEMHGTGT 481 >4RWS-C nrPDB Length = 80 Score = 25.4 bits (54), Expect = 6.8, Method: Compositional matrix adjust. Identities = 11/31 (35%), Positives = 19/31 (61%) Query: 89 CNQVEVIATLKDGRKICLDPDAPRIKKIVQK 119 C++ VI K GR++C D +KK++Q+ Sbjct: 35 CSKPGVIFLTKRGRQVCADKSKDWVKKLMQQ 65 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 1F9P-A nrPDB 140 2e-34 1NAP-A nrPDB 112 5e-26 1MSH-A nrPDB 108 8e-25 2MGS-A nrPDB 102 5e-23 1ROD-A nrPDB 100 1e-22 1MI2-A nrPDB 100 2e-22 4XDX-A nrPDB 100 2e-22 1PLF-A nrPDB 94 2e-20 1PFN-A nrPDB 94 2e-20 5OB5-A nrPDB 93 2e-20 5CBA-E nrPDB 89 5e-19 1LV9-A nrPDB 69 5e-13 Sequences not found previously or not previously below threshold: 2R3Z-A nrPDB 61 1e-10 5L7M-A nrPDB 60 2e-10 1ZXT-A nrPDB 44 2e-05 2HDL-A nrPDB 43 4e-05 6EHZ-A nrPDB 42 6e-05 1RJT-A nrPDB 42 7e-05 4MHE-A nrPDB 42 9e-05 2K04-A nrPDB 41 1e-04 4LMQ-D nrPDB 41 2e-04 2N55-A nrPDB 40 3e-04 2MP1-A nrPDB 38 0.001 4ZKB-B nrPDB 37 0.003 1HHV-A nrPDB 36 0.005 2RA4-A nrPDB 36 0.005 4RWS-C nrPDB 35 0.007 1NCV-A nrPDB 35 0.007 1G2S-A nrPDB 35 0.012 1ESR-A nrPDB 34 0.016 1EIG-A nrPDB 34 0.018 5LTL-A nrPDB 34 0.020 2Q8T-A nrPDB 34 0.025 2JYO-A nrPDB 33 0.030 2HCC-A nrPDB 32 0.049 2Q8R-E nrPDB 32 0.051 1EOT-A nrPDB 32 0.053 2X6L-A nrPDB 32 0.055 4ZLT-F nrPDB 30 0.23 1EQT-A nrPDB 30 0.26 5UIW-B nrPDB 30 0.27 1J9O-A nrPDB 30 0.36 2VXW-A nrPDB 30 0.38 1G91-A nrPDB 29 0.43 5YAM-A nrPDB 29 0.46 1NR4-A nrPDB 29 0.56 5EKI-A nrPDB 29 0.58 2L4N-A nrPDB 28 1.1 4BXW-A nrPDB 27 1.6 1DOL-A nrPDB 27 1.8 4XT3-B nrPDB 27 2.5 5WB2-B nrPDB 27 2.7 6BJC-T nrPDB 27 2.9 1HA6-A nrPDB 27 3.1 2XR1-A nrPDB 26 5.0 6GYM-4 nrPDB 25 5.9 >1F9P-A nrPDB Length = 85 Score = 140 bits (352), Expect = 2e-34, Method: Composition-based stats. Identities = 85/85 (100%), Positives = 85/85 (100%) Query: 44 NLAKGKEESLDSDLYAELRCMCIKTTSGIHPKNIQSLEVIGKGTHCNQVEVIATLKDGRK 103 NLAKGKEESLDSDLYAELRCMCIKTTSGIHPKNIQSLEVIGKGTHCNQVEVIATLKDGRK Sbjct: 1 NLAKGKEESLDSDLYAELRCMCIKTTSGIHPKNIQSLEVIGKGTHCNQVEVIATLKDGRK 60 Query: 104 ICLDPDAPRIKKIVQKKLAGDESAD 128 ICLDPDAPRIKKIVQKKLAGDESAD Sbjct: 61 ICLDPDAPRIKKIVQKKLAGDESAD 85 >1NAP-A nrPDB Length = 70 Score = 112 bits (279), Expect = 5e-26, Method: Composition-based stats. Identities = 69/70 (98%), Positives = 70/70 (100%) Query: 59 AELRCMCIKTTSGIHPKNIQSLEVIGKGTHCNQVEVIATLKDGRKICLDPDAPRIKKIVQ 118 AELRC+CIKTTSGIHPKNIQSLEVIGKGTHCNQVEVIATLKDGRKICLDPDAPRIKKIVQ Sbjct: 1 AELRCLCIKTTSGIHPKNIQSLEVIGKGTHCNQVEVIATLKDGRKICLDPDAPRIKKIVQ 60 Query: 119 KKLAGDESAD 128 KKLAGDESAD Sbjct: 61 KKLAGDESAD 70 >1MSH-A nrPDB Length = 72 Score = 108 bits (269), Expect = 8e-25, Method: Composition-based stats. Identities = 41/72 (56%), Positives = 53/72 (73%) Query: 55 SDLYAELRCMCIKTTSGIHPKNIQSLEVIGKGTHCNQVEVIATLKDGRKICLDPDAPRIK 114 + + ELRC C++T GIHPKNIQS+ V G HC Q EVIATLK+GRK CL+P +P +K Sbjct: 1 ASVATELRCQCLQTLQGIHPKNIQSVNVKSPGPHCAQTEVIATLKNGRKACLNPASPIVK 60 Query: 115 KIVQKKLAGDES 126 KI++K L D+S Sbjct: 61 KIIEKMLNSDKS 72 >2MGS-A nrPDB Length = 78 Score = 102 bits (253), Expect = 5e-23, Method: Composition-based stats. Identities = 36/69 (52%), Positives = 55/69 (79%) Query: 55 SDLYAELRCMCIKTTSGIHPKNIQSLEVIGKGTHCNQVEVIATLKDGRKICLDPDAPRIK 114 + + ELRC+C++TT G+HPK I +L+V G C++VEV+A+LK+G++ICLDP+AP +K Sbjct: 5 AAVLRELRCVCLQTTQGVHPKMISNLQVFAIGPQCSKVEVVASLKNGKEICLDPEAPFLK 64 Query: 115 KIVQKKLAG 123 K++QK L G Sbjct: 65 KVIQKILDG 73 >1ROD-A nrPDB Length = 72 Score = 100 bits (250), Expect = 1e-22, Method: Composition-based stats. Identities = 37/70 (52%), Positives = 46/70 (65%), Gaps = 1/70 (1%) Query: 58 YAELRCMCIKTTS-GIHPKNIQSLEVIGKGTHCNQVEVIATLKDGRKICLDPDAPRIKKI 116 ELRC CIKT S HPK I+ L VI G HC E+I L DGR++CLDP +P +KKI Sbjct: 2 AKELRCQCIKTYSKPFHPKFIKELRVIESGPHCANTEIIVKLSDGRELCLDPASPIVKKI 61 Query: 117 VQKKLAGDES 126 ++K L D+S Sbjct: 62 IEKMLNSDKS 71 >1MI2-A nrPDB Length = 73 Score = 100 bits (248), Expect = 2e-22, Method: Composition-based stats. Identities = 38/72 (52%), Positives = 51/72 (70%) Query: 55 SDLYAELRCMCIKTTSGIHPKNIQSLEVIGKGTHCNQVEVIATLKDGRKICLDPDAPRIK 114 + + +ELRC C+KT + KNIQSL V G HC Q EVIATLK G+K+CLDP+AP ++ Sbjct: 1 AVVASELRCQCLKTLPRVDFKNIQSLSVTPPGPHCAQTEVIATLKGGQKVCLDPEAPLVQ 60 Query: 115 KIVQKKLAGDES 126 KI+QK L ++ Sbjct: 61 KIIQKILNKGKA 72 >4XDX-A nrPDB Length = 70 Score = 100 bits (248), Expect = 2e-22, Method: Composition-based stats. Identities = 33/70 (47%), Positives = 44/70 (62%), Gaps = 1/70 (1%) Query: 59 AELRCMCIKTTS-GIHPKNIQSLEVIGKGTHCNQVEVIATLKDGRKICLDPDAPRIKKIV 117 ELRC CIKT S HPK I+ L VI G HC E+I L DGR++CLDP ++++V Sbjct: 1 KELRCQCIKTYSKPFHPKFIKELRVIESGPHCANTEIIVKLSDGRELCLDPKENWVQRVV 60 Query: 118 QKKLAGDESA 127 +K L E++ Sbjct: 61 EKFLKRAENS 70 >1PLF-A nrPDB Length = 72 Score = 94.0 bits (232), Expect = 2e-20, Method: Composition-based stats. Identities = 37/64 (57%), Positives = 49/64 (76%) Query: 60 ELRCMCIKTTSGIHPKNIQSLEVIGKGTHCNQVEVIATLKDGRKICLDPDAPRIKKIVQK 119 +L+C+C+KTTSGI+P++I SLEVIG G HC ++IATLK GRKICLD P KKI+++ Sbjct: 9 DLQCVCLKTTSGINPRHISSLEVIGAGLHCPSPQLIATLKTGRKICLDQQNPLYKKIIKR 68 Query: 120 KLAG 123 L Sbjct: 69 LLKS 72 >1PFN-A nrPDB Length = 68 Score = 94.0 bits (232), Expect = 2e-20, Method: Composition-based stats. Identities = 38/66 (57%), Positives = 47/66 (71%) Query: 58 YAELRCMCIKTTSGIHPKNIQSLEVIGKGTHCNQVEVIATLKDGRKICLDPDAPRIKKIV 117 ELRC C+KTTS + P++I SLEVI G HC ++IATLK+GRKICLD AP KKI+ Sbjct: 3 AKELRCQCVKTTSQVRPRHITSLEVIKAGPHCPTAQLIATLKNGRKICLDLQAPLYKKII 62 Query: 118 QKKLAG 123 +K L Sbjct: 63 KKLLES 68 >5OB5-A nrPDB Length = 63 Score = 93.2 bits (230), Expect = 2e-20, Method: Composition-based stats. Identities = 37/63 (58%), Positives = 48/63 (76%) Query: 60 ELRCMCIKTTSGIHPKNIQSLEVIGKGTHCNQVEVIATLKDGRKICLDPDAPRIKKIVQK 119 ELRC C++T GIH KNIQS++V G HC Q EVIATLK+G+K CL+P +P +KKI++K Sbjct: 1 ELRCQCLQTLQGIHLKNIQSVKVKSPGPHCAQTEVIATLKNGQKACLNPASPMVKKIIEK 60 Query: 120 KLA 122 L Sbjct: 61 MLK 63 >5CBA-E nrPDB Length = 88 Score = 89.0 bits (219), Expect = 5e-19, Method: Composition-based stats. Identities = 19/71 (26%), Positives = 38/71 (53%), Gaps = 1/71 (1%) Query: 58 YAELRCMCIKTTSGIHPK-NIQSLEVIGKGTHCNQVEVIATLKDGRKICLDPDAPRIKKI 116 Y LRC C++ +S P+ I ++++ +G C + E+I K+ +C+DP A I+++ Sbjct: 7 YTSLRCRCVQESSVFIPRRFIDRIQILPRGNGCPRKEIIVWKKNKSIVCVDPQAEWIQRM 66 Query: 117 VQKKLAGDESA 127 ++ S Sbjct: 67 MEVLRKRSSST 77 >1LV9-A nrPDB Length = 77 Score = 69.0 bits (167), Expect = 5e-13, Method: Composition-based stats. Identities = 23/64 (35%), Positives = 41/64 (64%), Gaps = 2/64 (3%) Query: 57 LYAELRCMCIKTT-SGIHPKNIQSLEVIGKGTHCNQVEVIATL-KDGRKICLDPDAPRIK 114 L +RC CI + ++P++++ LE+I C +VE+IAT+ K G K CL+P++ IK Sbjct: 3 LSRTVRCTCISISNQPVNPRSLEKLEIIPASQFCPRVEIIATMKKKGEKRCLNPESKAIK 62 Query: 115 KIVQ 118 +++ Sbjct: 63 NLLK 66 >2R3Z-A nrPDB Length = 68 Score = 61.3 bits (147), Expect = 1e-10, Method: Composition-based stats. Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 2/66 (3%) Query: 57 LYAELRCMCIKTTSG-IHPKNIQSLEVIGKGTHCNQVEVIATL-KDGRKICLDPDAPRIK 114 L +RC CI G + + I LE+I C +VE+IAT+ K+ + CL+P++ IK Sbjct: 3 LARTVRCNCIHIDDGPVRMRAIGKLEIIPASLSCPRVEIIATMKKNDEQRCLNPESKTIK 62 Query: 115 KIVQKK 120 +++ Sbjct: 63 NLMKAF 68 >5L7M-A nrPDB Length = 88 Score = 60.5 bits (145), Expect = 2e-10, Method: Composition-based stats. Identities = 18/71 (25%), Positives = 35/71 (49%), Gaps = 1/71 (1%) Query: 58 YAELRCMCIKTTSGIHPKNI-QSLEVIGKGTHCNQVEVIATLKDGRKICLDPDAPRIKKI 116 Y L+C C S + NI ++V G C + EV+ K + IC++P A ++++ Sbjct: 6 YTNLKCRCSGVISTVVGLNIIDRIQVTPPGNGCPKTEVVIWTKMKKVICVNPRAKWLQRL 65 Query: 117 VQKKLAGDESA 127 ++ + S+ Sbjct: 66 LRHVQSKSLSS 76 >1ZXT-A nrPDB Length = 76 Score = 43.5 bits (101), Expect = 2e-05, Method: Composition-based stats. Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 1/49 (2%) Query: 73 HPKNIQSL-EVIGKGTHCNQVEVIATLKDGRKICLDPDAPRIKKIVQKK 120 HP +Q L E C + VI K GR+IC DP +++++Q+ Sbjct: 18 HPPPVQILKEWYPTSPACPKPGVILLTKRGRQICADPSKNWVRQLMQRL 66 >2HDL-A nrPDB Length = 78 Score = 42.8 bits (99), Expect = 4e-05, Method: Composition-based stats. Identities = 17/62 (27%), Positives = 29/62 (46%), Gaps = 5/62 (8%) Query: 62 RCMCIKTTSGIHPKNIQSLEVIGKGTHCNQVEVIATLKD-----GRKICLDPDAPRIKKI 116 +C C + I +++ LE+ K HC + VI T K G++ CL P K+ Sbjct: 3 KCKCSRKGPKIRYSDVKKLEMKPKYPHCEEKMVIITTKSVSRYRGQEHCLHPKLQSTKRF 62 Query: 117 VQ 118 ++ Sbjct: 63 IK 64 >6EHZ-A nrPDB Length = 98 Score = 42.0 bits (97), Expect = 6e-05, Method: Composition-based stats. Identities = 18/73 (24%), Positives = 38/73 (52%), Gaps = 3/73 (4%) Query: 57 LYAELRCMCIKTTSGIHPKNIQSLEVIGKGTHCNQVEVIATLKDG-RKICLDPDAPRIKK 115 + RC C S I N++ L+++ +C ++++A LK+ R++C+DP I++ Sbjct: 3 VSLSYRCPCRFFESHIARANVKHLKILNT-PNCA-LQIVARLKNNNRQVCIDPKLKWIQE 60 Query: 116 IVQKKLAGDESAD 128 ++K L + Sbjct: 61 YLEKALNKGRREE 73 >1RJT-A nrPDB Length = 73 Score = 42.0 bits (97), Expect = 7e-05, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 35/61 (57%), Gaps = 2/61 (3%) Query: 62 RCMCIKT-TSGIHPKNIQSLEVIGKGTHCNQVEVIATLK-DGRKICLDPDAPRIKKIVQK 119 RC+CI + +I+ ++ +C+++EVI TLK + + CL+P + + + I++K Sbjct: 8 RCLCIGPGVKAVKVADIEKASIMYPSNNCDKIEVIITLKENKGQRCLNPKSKQARLIIKK 67 Query: 120 K 120 Sbjct: 68 V 68 >4MHE-A nrPDB Length = 70 Score = 41.6 bits (96), Expect = 9e-05, Method: Composition-based stats. Identities = 16/58 (27%), Positives = 26/58 (44%), Gaps = 2/58 (3%) Query: 63 CMCIKTTSGIHPKNIQSLEVIGKGTHCNQVEVIATLKDGRKICLDPDAPRIKKIVQKK 120 C + T+ I K I ++ C + VI K GR+IC DP+ ++K + Sbjct: 11 CCLVYTSWQIPQKFI--VDYSETSPQCPKPGVILLTKRGRQICADPNKKWVQKYISDL 66 >2K04-A nrPDB Length = 70 Score = 41.2 bits (95), Expect = 1e-04, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 36/67 (53%), Gaps = 3/67 (4%) Query: 57 LYAELRCMCIKTTSGIHPKNIQSLEVIGKGTHCNQVEVIATLKDG-RKICLDPDAPRIKK 115 + RC C S + N++ L+++ +C +++A LK+ R++C+DP I++ Sbjct: 5 VSLSYRCPCRFFESHVARANVKHLKILNT-PNCA-CQIVARLKNNNRQVCIDPKLKWIQE 62 Query: 116 IVQKKLA 122 ++K L Sbjct: 63 YLEKCLN 69 >4LMQ-D nrPDB Length = 61 Score = 40.8 bits (94), Expect = 2e-04, Method: Composition-based stats. Identities = 17/62 (27%), Positives = 36/62 (58%), Gaps = 3/62 (4%) Query: 62 RCMCIKTTSGIHPKNIQSLEVIGKGTHCNQVEVIATLKDG-RKICLDPDAPRIKKIVQKK 120 RC C S + N++ L+++ +C ++++A LK+ R++C+DP I++ ++K Sbjct: 1 RCPCRFFESHVARANVKHLKILNT-PNCA-LQIVARLKNNNRQVCIDPKLKWIQEYLEKA 58 Query: 121 LA 122 L Sbjct: 59 LN 60 >2N55-A nrPDB Length = 70 Score = 40.1 bits (92), Expect = 3e-04, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 36/67 (53%), Gaps = 3/67 (4%) Query: 57 LYAELRCMCIKTTSGIHPKNIQSLEVIGKGTHCNQVEVIATLKDG-RKICLDPDAPRIKK 115 + RC C S + N++ L+++ +C ++++A LK+ R++C+DP ++ Sbjct: 5 VSLSYRCPCRFFESHVARANVKHLKILNT-PNCA-LQIVARLKNNNRQVCIDPKCKWCQE 62 Query: 116 IVQKKLA 122 ++K L Sbjct: 63 YLEKALN 69 >2MP1-A nrPDB Length = 77 Score = 38.1 bits (87), Expect = 0.001, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 27/57 (47%), Gaps = 1/57 (1%) Query: 65 CIKTTSGIHPKNI-QSLEVIGKGTHCNQVEVIATLKDGRKICLDPDAPRIKKIVQKK 120 C+ T P I ++ + C V+ T GR++C PD P +++I+Q+ Sbjct: 9 CLSVTQKPIPGYIVRNFHYLLIKDGCRVPAVVFTTLRGRQLCAPPDQPWVERIIQRL 65 >4ZKB-B nrPDB Length = 75 Score = 36.6 bits (83), Expect = 0.003, Method: Composition-based stats. Identities = 15/56 (26%), Positives = 25/56 (44%), Gaps = 1/56 (1%) Query: 65 CIKTTSGIHPKNIQSLEVIGKGTHCNQVEVIATLKDGRKICLDPDAPRIKKIVQKK 120 C TS P+N + + + C++ VI K R++C DP ++K V Sbjct: 11 CFSYTSRQIPQNFIA-DYFETSSQCSKPGVIFLTKRSRQVCADPSEEWVQKYVSDL 65 >1HHV-A nrPDB Length = 74 Score = 35.8 bits (81), Expect = 0.005, Method: Composition-based stats. Identities = 16/70 (22%), Positives = 32/70 (45%), Gaps = 2/70 (2%) Query: 51 ESLDSDLYAELRCMCIKTTSGIHPKNIQSLEVIGKGTHCNQVEVIATLKDGRKICLDPDA 110 ++L + + +C C+ P+ + S C++ VI K GR++C D Sbjct: 2 DTLGASWHRPDKC-CLGYQKRPLPQVLLS-SWYPTSQLCSKPGVIFLTKRGRQVCADKSK 59 Query: 111 PRIKKIVQKK 120 +KK++Q+ Sbjct: 60 DWVKKLMQQL 69 >2RA4-A nrPDB Length = 76 Score = 35.8 bits (81), Expect = 0.005, Method: Composition-based stats. Identities = 10/32 (31%), Positives = 16/32 (50%) Query: 89 CNQVEVIATLKDGRKICLDPDAPRIKKIVQKK 120 C Q VI K G++IC DP ++ ++ Sbjct: 36 CPQKAVIFRTKLGKEICADPKEKWVQNYMKHL 67 >4RWS-C nrPDB Length = 80 Score = 35.4 bits (80), Expect = 0.007, Method: Composition-based stats. Identities = 11/37 (29%), Positives = 19/37 (51%) Query: 84 GKGTHCNQVEVIATLKDGRKICLDPDAPRIKKIVQKK 120 C++ VI K GR++C D +KK++Q+ Sbjct: 30 PTSQLCSKPGVIFLTKRGRQVCADKSKDWVKKLMQQL 66 >1NCV-A nrPDB Length = 76 Score = 35.4 bits (80), Expect = 0.007, Method: Composition-based stats. Identities = 12/56 (21%), Positives = 22/56 (39%) Query: 65 CIKTTSGIHPKNIQSLEVIGKGTHCNQVEVIATLKDGRKICLDPDAPRIKKIVQKK 120 C + + PK +HC + VI K ++IC DP ++ ++ Sbjct: 12 CYRFINKKIPKQRLESYRRTTSSHCPREAVIFKTKLDKEICADPTQKWVQDFMKHL 67 >1G2S-A nrPDB Length = 71 Score = 34.7 bits (78), Expect = 0.012, Method: Composition-based stats. Identities = 11/32 (34%), Positives = 17/32 (53%) Query: 86 GTHCNQVEVIATLKDGRKICLDPDAPRIKKIV 117 C+Q VI T K G+K+C P ++K + Sbjct: 31 SNSCSQRAVIFTTKRGKKVCTHPRKKWVQKYI 62 >1ESR-A nrPDB Length = 76 Score = 34.3 bits (77), Expect = 0.016, Method: Composition-based stats. Identities = 14/67 (20%), Positives = 27/67 (40%), Gaps = 5/67 (7%) Query: 56 DLYAELRCMCIKTTSGIHPKNIQSLEVIGK--GTHCNQVEVIATLKDGRKICLDPDAPRI 113 + + C C + P IQ LE + C + VI + G+++C DP + Sbjct: 4 SVSIPITC-CFNVINRKIP--IQRLESYTRITNIQCPKEAVIFKTQRGKEVCADPKERWV 60 Query: 114 KKIVQKK 120 + ++ Sbjct: 61 RDSMKHL 67 >1EIG-A nrPDB Length = 73 Score = 33.9 bits (76), Expect = 0.018, Method: Composition-based stats. Identities = 17/64 (26%), Positives = 32/64 (50%), Gaps = 2/64 (3%) Query: 65 CIKTTSGIHPKN-IQSLEVIGKGTHCNQVEVIATLKDGRKICLDPDAPRIKKIVQKKLAG 123 C+ S P+N + S ++ + T C + VI T K G++ C DP +++ ++ A Sbjct: 8 CMFFVSKRIPENRVVSYQLSSRST-CLKAGVIFTTKKGQQSCGDPKQEWVQRYMKNLDAK 66 Query: 124 DESA 127 + A Sbjct: 67 QKKA 70 >5LTL-A nrPDB Length = 100 Score = 33.9 bits (76), Expect = 0.020, Method: Composition-based stats. Identities = 10/54 (18%), Positives = 27/54 (50%), Gaps = 2/54 (3%) Query: 65 CIKTTSGIHPKNIQSLEVIGKGTHCNQVEVIATLKDGRKICLDPDAPRIKKIVQ 118 C+K + P+ + + K +C+ +I K R++C +P+ +++ ++ Sbjct: 18 CLKYYEKVLPRRL--VVGYRKALNCHLPAIIFVTKRNREVCTNPNDDWVQEYIK 69 >2Q8T-A nrPDB Length = 74 Score = 33.5 bits (75), Expect = 0.025, Method: Composition-based stats. Identities = 13/72 (18%), Positives = 29/72 (40%), Gaps = 2/72 (2%) Query: 49 KEESLDSDLYAELRCMCIKTTSGIHPKNIQSLEVIGKGTHCNQVEVIATLKDGRKICLDP 108 K ES Y C C T+ P+ + ++ + C++ ++ K G +C +P Sbjct: 2 KTESSSRGPYHPSEC-CFTYTTYKIPRQ-RIMDYYETNSQCSKPGIVFITKRGHSVCTNP 59 Query: 109 DAPRIKKIVQKK 120 ++ ++ Sbjct: 60 SDKWVQDYIKDM 71 >2JYO-A nrPDB Length = 70 Score = 33.1 bits (74), Expect = 0.030, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 24/63 (38%), Gaps = 1/63 (1%) Query: 65 CIKTTSGI-HPKNIQSLEVIGKGTHCNQVEVIATLKDGRKICLDPDAPRIKKIVQKKLAG 123 C+ T I HPK I C+ +I K +C +P +K IV+ Sbjct: 7 CLGYTDRILHPKFIVGFTRQLANEGCDINAIIFHTKKKLSVCANPKQTWVKYIVRLLSKK 66 Query: 124 DES 126 ++ Sbjct: 67 VKN 69 >2HCC-A nrPDB Length = 66 Score = 32.4 bits (72), Expect = 0.049, Method: Composition-based stats. Identities = 13/56 (23%), Positives = 24/56 (42%), Gaps = 1/56 (1%) Query: 65 CIKTTSGIHPKNIQSLEVIGKGTHCNQVEVIATLKDGRKICLDPDAPRIKKIVQKK 120 C S P ++ + C++ VI K GR++C P P ++ ++K Sbjct: 7 CTSYISQSIPCSLMK-SYFETSSECSKPGVIFLTKKGRQVCAKPSGPGVQDCMKKL 61 >2Q8R-E nrPDB Length = 66 Score = 32.4 bits (72), Expect = 0.051, Method: Composition-based stats. Identities = 8/56 (14%), Positives = 24/56 (42%), Gaps = 1/56 (1%) Query: 65 CIKTTSGIHPKNIQSLEVIGKGTHCNQVEVIATLKDGRKICLDPDAPRIKKIVQKK 120 C T+ P+ + ++ + C++ ++ K G +C +P ++ ++ Sbjct: 9 CFTYTTYKIPRQ-RIMDYYETNSQCSKPGIVFITKRGHSVCTNPSDKWVQDYIKDM 63 >1EOT-A nrPDB Length = 74 Score = 32.4 bits (72), Expect = 0.053, Method: Composition-based stats. Identities = 14/57 (24%), Positives = 23/57 (40%), Gaps = 2/57 (3%) Query: 65 CIKTTSGIHP-KNIQSLEVIGKGTHCNQVEVIATLKDGRKICLDPDAPRIKKIVQKK 120 C + P + ++S I G C Q VI K + IC DP ++ ++ Sbjct: 10 CFNLANRKIPLQRLESYRRITSGK-CPQKAVIFKTKLAKDICADPKKKWVQDSMKYL 65 >2X6L-A nrPDB Length = 69 Score = 32.4 bits (72), Expect = 0.055, Method: Composition-based stats. Identities = 12/53 (22%), Positives = 25/53 (47%), Gaps = 1/53 (1%) Query: 65 CIKTTSGIHPKNIQSLEVIGKGTHCNQVEVIATLKDGRKICLDPDAPRIKKIV 117 C T+ P+N ++ + C+Q V+ K +++C DP +++ V Sbjct: 12 CFSYTARKLPRNFV-VDYYETSSLCSQPAVVFQTKRSKQVCADPSESWVQEYV 63 >4ZLT-F nrPDB Length = 70 Score = 30.4 bits (67), Expect = 0.23, Method: Composition-based stats. Identities = 12/56 (21%), Positives = 22/56 (39%), Gaps = 1/56 (1%) Query: 65 CIKTTSGIHPKNIQSLEVIGKGTHCNQVEVIATLKDGRKICLDPDAPRIKKIVQKK 120 C + S P+ + + C+Q VI K R+IC D +++ + Sbjct: 12 CCFSYSRKIPRQFI-VAYFETSSLCSQPGVIFLTKRNRQICADSKETWVQEYITDL 66 >1EQT-A nrPDB Length = 68 Score = 30.1 bits (66), Expect = 0.26, Method: Composition-based stats. Identities = 5/32 (15%), Positives = 16/32 (50%) Query: 89 CNQVEVIATLKDGRKICLDPDAPRIKKIVQKK 120 C+ V+ + R++C +P+ +++ + Sbjct: 34 CSNPAVVFVTRKNRQVCANPEKKWVREYINSL 65 >5UIW-B nrPDB Length = 75 Score = 30.1 bits (66), Expect = 0.27, Method: Composition-based stats. Identities = 10/61 (16%), Positives = 26/61 (42%), Gaps = 3/61 (4%) Query: 61 LRCMCIKTTSGIHPK-NIQSLEVIGKGTHCNQVEVIATLKDGRKICLDPDAPRIKKIVQK 119 L+ C + P+ +I+ E C+ V+ + R++C +P+ +++ + Sbjct: 8 LQSCCFAYIARPLPRAHIK--EYFYTSGKCSNPAVVFVTRKNRQVCANPEKKWVREYINS 65 Query: 120 K 120 Sbjct: 66 L 66 >1J9O-A nrPDB Length = 93 Score = 29.7 bits (65), Expect = 0.36, Method: Composition-based stats. Identities = 12/57 (21%), Positives = 24/57 (42%), Gaps = 3/57 (5%) Query: 64 MCIKTTSGIHPKNIQSLEVIGKGTHCNQVEVIATLKDGRKICLDPDAPRIKKIVQKK 120 C+ T+ P + ++ + + T K G K+C DP A ++ +V+ Sbjct: 10 TCVSLTTQRLP--VSRIKTYTITEGSLRAVIFIT-KRGLKVCADPQATWVRDVVRSM 63 >2VXW-A nrPDB Length = 69 Score = 29.7 bits (65), Expect = 0.38, Method: Composition-based stats. Identities = 5/32 (15%), Positives = 16/32 (50%) Query: 89 CNQVEVIATLKDGRKICLDPDAPRIKKIVQKK 120 C+ V+ + R++C +P+ +++ + Sbjct: 35 CSNPAVVFVTRKNRQVCANPEKKWVREYINSL 66 >1G91-A nrPDB Length = 77 Score = 29.3 bits (64), Expect = 0.43, Method: Composition-based stats. Identities = 16/72 (22%), Positives = 29/72 (40%), Gaps = 3/72 (4%) Query: 53 LDSDLYAELRCMCIKTTSGIHPKNIQSLEVIGKGTHCNQVEVIATLKDGRKICLDPDAPR 112 +D C CI T P ++ + C++ VI K GR+ C +P + Sbjct: 1 MDRFHATSADC-CISYTPRSIPCSLLE-SYFETNSECSKPGVIFLTKKGRRFCANPSDKQ 58 Query: 113 IKKIVQKKLAGD 124 ++ + + L D Sbjct: 59 VQ-VCMRMLKLD 69 >5YAM-A nrPDB Length = 69 Score = 29.3 bits (64), Expect = 0.46, Method: Composition-based stats. Identities = 9/54 (16%), Positives = 26/54 (48%), Gaps = 3/54 (5%) Query: 65 CIKTTSGIHPK-NIQSLEVIGKGTHCNQVEVIATLKDGRKICLDPDAPRIKKIV 117 C S P+ +++ E + C+ + V+ + R++C +P+ +++ + Sbjct: 12 CFAYLSLALPRAHVK--EYFYTSSKCSNLAVVFVTRRNRQVCANPEKKWVQEYI 63 >1NR4-A nrPDB Length = 71 Score = 28.9 bits (63), Expect = 0.56, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 29/63 (46%), Gaps = 3/63 (4%) Query: 65 CIKTTSGIHPKNIQSLEV-IGKGTHCNQVEVIATLKDGRKICLDPDAPRIKKIVQKKLAG 123 C++ G P ++ L+ C++ ++ GR IC DP+ R+K V+ + Sbjct: 11 CLEYFKGAIP--LRKLKTWYQTSEDCSRDAIVFVTVQGRAICSDPNNKRVKNAVKYLQSL 68 Query: 124 DES 126 + S Sbjct: 69 ERS 71 >5EKI-A nrPDB Length = 79 Score = 28.9 bits (63), Expect = 0.58, Method: Composition-based stats. Identities = 10/59 (16%), Positives = 25/59 (42%), Gaps = 3/59 (5%) Query: 65 CIKTTSGIHP-KNIQSLEVIGKGTHCNQVEVI--ATLKDGRKICLDPDAPRIKKIVQKK 120 C+K + P K ++S C+ ++ + ++C DP +++++Q Sbjct: 9 CLKYSQRKIPAKVVRSYRKQEPSLGCSIPAILFLPRKRSQAELCADPKELWVQQLMQHL 67 >2L4N-A nrPDB Length = 113 Score = 28.1 bits (61), Expect = 1.1, Method: Composition-based stats. Identities = 10/59 (16%), Positives = 25/59 (42%), Gaps = 3/59 (5%) Query: 65 CIKTTSGIHP-KNIQSLEVIGKGTHCNQVEVI--ATLKDGRKICLDPDAPRIKKIVQKK 120 C+K + P K ++S C+ ++ + ++C DP +++++Q Sbjct: 9 CLKYSQRKIPAKVVRSYRKQEPSLGCSIPAILFLPRKRSQAELCADPKELWVQQLMQHL 67 >4BXW-A nrPDB Length = 423 Score = 27.4 bits (59), Expect = 1.6, Method: Composition-based stats. Identities = 13/46 (28%), Positives = 21/46 (45%), Gaps = 5/46 (10%) Query: 82 VIGKGTHCNQVEVIATLKDGRKICLDPDAPRIKKIVQKKLAGDESA 127 ++ G C + K G L P IK+I+++KL ES+ Sbjct: 379 IVSSGEGCARNG-----KYGNYTKLSKFIPWIKRIMRQKLPSTESS 419 >1DOL-A nrPDB Length = 77 Score = 27.4 bits (59), Expect = 1.8, Method: Composition-based stats. Identities = 11/53 (20%), Positives = 19/53 (35%), Gaps = 1/53 (1%) Query: 68 TTSGIHPKNIQSLEVIGKGTHCNQVEVIATLKDGRKICLDPDAPRIKKIVQKK 120 T I + + S I C + VI ++IC DP ++ + Sbjct: 17 TNRKISVQRLASYRRITSSK-CPKEAVIFKTIVAKEICADPKQKWVQDSMDHL 68 >4XT3-B nrPDB Length = 91 Score = 27.0 bits (58), Expect = 2.5, Method: Composition-based stats. Identities = 8/32 (25%), Positives = 13/32 (40%) Query: 89 CNQVEVIATLKDGRKICLDPDAPRIKKIVQKK 120 C + +I + R C DP +K +Q Sbjct: 34 CGKRAIILETRQHRLFCADPKEQWVKDAMQHL 65 >5WB2-B nrPDB Length = 76 Score = 26.6 bits (57), Expect = 2.7, Method: Composition-based stats. Identities = 8/32 (25%), Positives = 13/32 (40%) Query: 89 CNQVEVIATLKDGRKICLDPDAPRIKKIVQKK 120 C + +I + R C DP +K +Q Sbjct: 34 CGKRAIILETRQHRLFCADPKEQWVKDAMQHL 65 >6BJC-T nrPDB Length = 747 Score = 26.6 bits (57), Expect = 2.9, Method: Composition-based stats. Identities = 18/84 (21%), Positives = 33/84 (39%), Gaps = 8/84 (9%) Query: 34 ASSTKGQT---KRNLAKGKEESLDSDLYAELRCMCIKTTSGIHPKNIQSLEVIGKGTHCN 90 A TKG T NL++GK+ + D + + + H + + K Sbjct: 295 ARVTKGCTIVKPFNLSQGKKRTFDETVSTYV--PLAQQVEDFHKRTPNRYHLRSKKD--- 349 Query: 91 QVEVIATLKDGRKICLDPDAPRIK 114 + ++ + KIC DP P ++ Sbjct: 350 DINLLPSKSSVTKICRDPQTPVLQ 373 >1HA6-A nrPDB Length = 70 Score = 26.6 bits (57), Expect = 3.1, Method: Composition-based stats. Identities = 8/29 (27%), Positives = 14/29 (48%) Query: 89 CNQVEVIATLKDGRKICLDPDAPRIKKIV 117 C+ +I K + +C DP +K+ V Sbjct: 32 CDINAIIFHTKKRKSVCADPKQNWVKRAV 60 >2XR1-A nrPDB Length = 640 Score = 25.8 bits (55), Expect = 5.0, Method: Composition-based stats. Identities = 7/27 (25%), Positives = 12/27 (44%) Query: 90 NQVEVIATLKDGRKICLDPDAPRIKKI 116 + E + T K C+D + KK+ Sbjct: 598 PRPERVFTEHGDEKACVDLASSVYKKL 624 >6GYM-4 nrPDB Length = 338 Score = 25.4 bits (54), Expect = 5.9, Method: Composition-based stats. Identities = 17/72 (23%), Positives = 24/72 (33%), Gaps = 14/72 (19%) Query: 58 YAELRCMCIKTTSGIHPKNIQS-----LEVIGKGTHCNQVE------VIATLKDGRKICL 106 + R C T + I S L +I G C + VIA LK + Sbjct: 269 SVDFRTSCYLTGRVVAVGFICSVCLCVLSIIPPGNKCPACDSQFDEHVIAKLKRKPVV-- 326 Query: 107 DPDAPRIKKIVQ 118 P KK+ + Sbjct: 327 -PRLKAKKKVTK 337 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.311 0.132 0.360 Lambda K H 0.267 0.0409 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 4,130,238 Number of Sequences: 36641 Number of extensions: 130122 Number of successful extensions: 408 Number of sequences better than 10.0: 57 Number of HSP's better than 10.0 without gapping: 78 Number of HSP's successfully gapped in prelim test: 12 Number of HSP's that attempted gapping in prelim test: 317 Number of HSP's gapped (non-prelim): 90 length of query: 128 length of database: 10,336,785 effective HSP length: 86 effective length of query: 42 effective length of database: 7,185,659 effective search space: 301797678 effective search space used: 301797678 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.3 bits) S2: 53 (25.0 bits)