BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= P02753 (201 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 4PSQ-B nrPDB 389 e-109 1JYJ-A nrPDB 378 e-106 1FEM-A nrPDB 363 e-101 1IIU-A nrPDB 328 7e-91 2HZQ-A nrPDB 44 3e-05 4R0B-A nrPDB 39 0.001 6GQZ-A nrPDB 35 0.024 1GKA-B nrPDB 35 0.026 4IAX-A nrPDB 34 0.033 2ACO-A nrPDB 33 0.11 2RD7-C nrPDB 32 0.13 3MBT-A nrPDB 32 0.15 4K6M-A nrPDB 32 0.19 2K23-A nrPDB 32 0.21 1EW3-A nrPDB 32 0.23 3DTQ-A nrPDB 32 0.24 4HDG-A nrPDB 32 0.25 5MHH-A nrPDB 32 0.27 5L7O-C nrPDB 31 0.30 3GTN-A nrPDB 31 0.30 1JZU-A nrPDB 31 0.32 4GH7-A nrPDB 31 0.35 1OBQ-A nrPDB 31 0.37 1GM6-A nrPDB 31 0.37 5X7Y-A nrPDB 30 0.80 1Z24-A nrPDB 30 0.87 5N47-A nrPDB 29 1.3 1QWK-A nrPDB 28 1.9 2L9C-A nrPDB 28 2.1 1EPB-A nrPDB 28 2.4 5H9K-A nrPDB 27 5.8 4FDM-A nrPDB 27 6.4 5HGQ-A nrPDB 27 6.9 4PZK-A nrPDB 26 9.5 >4PSQ-B nrPDB Length = 212 Score = 389 bits (998), Expect = e-109, Method: Compositional matrix adjust. Identities = 184/186 (98%), Positives = 184/186 (98%) Query: 16 GRAERDCRVSSFRVKENFDKARFSGTWYAMAKKDPEGLFLQDNIVAEFSVDETGQMSATA 75 G ERDCRVSSFRVKENFDKARFSGTWYAMAKKDPEGLFLQDNIVAEFSVDETGQMSATA Sbjct: 27 GAMERDCRVSSFRVKENFDKARFSGTWYAMAKKDPEGLFLQDNIVAEFSVDETGQMSATA 86 Query: 76 KGRVRLLNNWDVCADMVGTFTDTEDPAKFKMKYWGVASFLQKGNDDHWIVDTDYDTYAVQ 135 KGRVRLLNNWDVCADMVGTFTDTEDPAKFKMKYWGVASFLQKGNDDHWIVDTDYDTYAVQ Sbjct: 87 KGRVRLLNNWDVCADMVGTFTDTEDPAKFKMKYWGVASFLQKGNDDHWIVDTDYDTYAVQ 146 Query: 136 YSCRLLNLDGTCADSYSFVFSRDPNGLPPEAQKIVRQRQEELCLARQYRLIVHNGYCDGR 195 YSCRLLNLDGTCADSYSFVFSRDPNGLPPEAQKIVRQRQEELCLARQYRLIVHNGYCDGR Sbjct: 147 YSCRLLNLDGTCADSYSFVFSRDPNGLPPEAQKIVRQRQEELCLARQYRLIVHNGYCDGR 206 Query: 196 SERNLL 201 SERNLL Sbjct: 207 SERNLL 212 >1JYJ-A nrPDB Length = 183 Score = 378 bits (971), Expect = e-106, Method: Compositional matrix adjust. Identities = 180/182 (98%), Positives = 180/182 (98%) Query: 19 ERDCRVSSFRVKENFDKARFSGTWYAMAKKDPEGLFLQDNIVAEFSVDETGQMSATAKGR 78 ERDCRVSSFRVKENFDKARFSGTWYAMAKKDPEGLFLQDNIVAEFSVDETGQMSATAKGR Sbjct: 2 ERDCRVSSFRVKENFDKARFSGTWYAMAKKDPEGLFLQDNIVAEFSVDETGQMSATAKGR 61 Query: 79 VRLLNNWDVCADMVGTFTDTEDPAKFKMKYWGVASFLQKGNDDHWIVDTDYDTYAVQYSC 138 VRLLNN DVCADMVGTFTDTEDPAKFKMKY GVASFLQKGNDDHWIVDTDYDTYAVQYSC Sbjct: 62 VRLLNNLDVCADMVGTFTDTEDPAKFKMKYHGVASFLQKGNDDHWIVDTDYDTYAVQYSC 121 Query: 139 RLLNLDGTCADSYSFVFSRDPNGLPPEAQKIVRQRQEELCLARQYRLIVHNGYCDGRSER 198 RLLNLDGTCADSYSFVFSRDPNGLPPEAQKIVRQRQEELCLARQYRLIVHNGYCDGRSER Sbjct: 122 RLLNLDGTCADSYSFVFSRDPNGLPPEAQKIVRQRQEELCLARQYRLIVHNGYCDGRSER 181 Query: 199 NL 200 NL Sbjct: 182 NL 183 >1FEM-A nrPDB Length = 183 Score = 363 bits (933), Expect = e-101, Method: Compositional matrix adjust. Identities = 169/183 (92%), Positives = 177/183 (96%) Query: 19 ERDCRVSSFRVKENFDKARFSGTWYAMAKKDPEGLFLQDNIVAEFSVDETGQMSATAKGR 78 ERDCRVSSFRVKENFDKARF+GTWYAMAKKDPEGLFLQDNIVAEFSVDE G MSATAKGR Sbjct: 1 ERDCRVSSFRVKENFDKARFAGTWYAMAKKDPEGLFLQDNIVAEFSVDENGHMSATAKGR 60 Query: 79 VRLLNNWDVCADMVGTFTDTEDPAKFKMKYWGVASFLQKGNDDHWIVDTDYDTYAVQYSC 138 VRLLNNWDVCADMVGTFTDTEDPAKFKMKYWGVASFLQKGNDDHWI+DTDY+T+AVQYSC Sbjct: 61 VRLLNNWDVCADMVGTFTDTEDPAKFKMKYWGVASFLQKGNDDHWIIDTDYETFAVQYSC 120 Query: 139 RLLNLDGTCADSYSFVFSRDPNGLPPEAQKIVRQRQEELCLARQYRLIVHNGYCDGRSER 198 RLLNLDGTCADSYSFVF+RDP+G PE QKIVRQRQEELCLARQYRLI HNGYCDG+SER Sbjct: 121 RLLNLDGTCADSYSFVFARDPSGFSPEVQKIVRQRQEELCLARQYRLIPHNGYCDGKSER 180 Query: 199 NLL 201 N+L Sbjct: 181 NIL 183 >1IIU-A nrPDB Length = 174 Score = 328 bits (842), Expect = 7e-91, Method: Compositional matrix adjust. Identities = 150/172 (87%), Positives = 163/172 (94%) Query: 21 DCRVSSFRVKENFDKARFSGTWYAMAKKDPEGLFLQDNIVAEFSVDETGQMSATAKGRVR 80 DCRVSSF+VKENFDK R+SGTWYAMAKKDPEGLFLQDN+VA+F+VDE GQMSATAKGRVR Sbjct: 2 DCRVSSFKVKENFDKNRYSGTWYAMAKKDPEGLFLQDNVVAQFTVDENGQMSATAKGRVR 61 Query: 81 LLNNWDVCADMVGTFTDTEDPAKFKMKYWGVASFLQKGNDDHWIVDTDYDTYAVQYSCRL 140 L NNWDVCADM+G+FTDTEDPAKFKMKYWGVASFLQKGNDDHW+VDTDYDTYA+ YSCR Sbjct: 62 LFNNWDVCADMIGSFTDTEDPAKFKMKYWGVASFLQKGNDDHWVVDTDYDTYALHYSCRE 121 Query: 141 LNLDGTCADSYSFVFSRDPNGLPPEAQKIVRQRQEELCLARQYRLIVHNGYC 192 LN DGTCADSYSFVFSRDP GLPPEAQKIVRQRQ +LCL R+YR+IVHNG+C Sbjct: 122 LNEDGTCADSYSFVFSRDPKGLPPEAQKIVRQRQIDLCLDRKYRVIVHNGFC 173 >2HZQ-A nrPDB Length = 174 Score = 44.3 bits (103), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 39/144 (27%), Positives = 69/144 (47%), Gaps = 23/144 (15%) Query: 29 VKENFDKARFSGTWYAMAKKDPEGLFLQDNIVAEFSVDETGQMSAT-----AKGRVRLLN 83 V+ENFD ++ G WY + +K P I A +S+ E G++ A G V + Sbjct: 11 VQENFDVNKYPGRWYEI-EKIPTTFENGRCIQANYSLMENGKIKVLNQELRADGTVNQI- 68 Query: 84 NWDVCADMVGTFTDTEDPAKFKMKY-WGVASFLQKGNDDHWIVDTDYDTYAVQYSCRLLN 142 + T + +PAK ++K+ W + S + I+ TDY+ YA+ YSC + Sbjct: 69 ------EGEATPVNLTEPAKLEVKFSWFMPS------APYHILATDYENYALVYSCT--S 114 Query: 143 LDGTCADSYSFVFSRDPNGLPPEA 166 + + ++++ +R+ LPPE Sbjct: 115 ISQSFHVDFAWILARN-VALPPET 137 >4R0B-A nrPDB Length = 169 Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust. Identities = 28/107 (26%), Positives = 50/107 (46%), Gaps = 11/107 (10%) Query: 28 RVKENFDKARFSGTWYAMAKKDPEGLFLQDNIVAEFSVDETGQMSATAKGRVRLLNNWD- 86 + K++ + + +GTW++MA E + L + A V T + +L+ W+ Sbjct: 4 QTKQDLELPKLAGTWHSMAMATNE-ISLMATLKAPLRVHITSLLPTPEDNLEIVLHRWEN 62 Query: 87 -VCADMVGTFTDTEDPAKFKMKYWGVASFLQKGNDDHWIVDTDYDTY 132 C + TE+P KFK+ Y VA ++ ++DTDYD + Sbjct: 63 NSCVEKKVLGEKTENPKKFKINY-TVA-------NEATLLDTDYDNF 101 >6GQZ-A nrPDB Length = 174 Score = 35.0 bits (79), Expect = 0.024, Method: Compositional matrix adjust. Identities = 27/126 (21%), Positives = 53/126 (42%), Gaps = 29/126 (23%) Query: 24 VSSFRVKENFDKARFSGTWYAMA---------KKDPEGLFLQDNIVAEFSVDETGQMSAT 74 +S +++NF +F G WY + KDP + + E D++ ++ Sbjct: 9 LSKVPLQQNFQDNQFHGKWYVVGFAENIQQREDKDPPKMIA---TIYELKEDKSYNVTNV 65 Query: 75 AKGRVRLLNNWDVCADMVGTFTDTEDPAKFKM----KYWGVASFLQKGNDDHWIVDTDYD 130 A +NW+ C + TF P +F + G+ S+L + +V T+Y+ Sbjct: 66 A-------SNWEKCTYRIKTFVPGSQPGEFTLGEIKSRPGMTSYLVR------VVSTNYN 112 Query: 131 TYAVQY 136 +A+ + Sbjct: 113 QHAMVF 118 >1GKA-B nrPDB Length = 174 Score = 34.7 bits (78), Expect = 0.026, Method: Compositional matrix adjust. Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 3/73 (4%) Query: 124 IVDTDYDTYAVQYSCRLLNLDGTCADSYSFVFSRDPNGLPPEAQKIVRQRQEELCLARQY 183 +++TDY+TY+ YSC + D ++ ++FVFSR P P +K + ++ Sbjct: 105 VIETDYETYSCVYSC--ITTDNYKSE-FAFVFSRTPQTSGPAVEKTAAVFNKNGVEFSKF 161 Query: 184 RLIVHNGYCDGRS 196 + H C R+ Sbjct: 162 VPVSHTAECVYRA 174 >4IAX-A nrPDB Length = 188 Score = 34.3 bits (77), Expect = 0.033, Method: Compositional matrix adjust. Identities = 30/124 (24%), Positives = 51/124 (41%), Gaps = 25/124 (20%) Query: 24 VSSFRVKENFDKARFSGTWY-------AMAKKDPEGLFLQDNIVAEFSVDETGQMSATAK 76 +S +++NF +F G WY A DPE L L + + E TA Sbjct: 13 LSKVPLQQNFQDNQFHGKWYQVGRAGNAAPPMDPELLLL---TAQTYELKEDKSYDVTA- 68 Query: 77 GRVRLLNNWDVCADMVGTFTDTEDPAKFKM----KYWGVASFLQKGNDDHWIVDTDYDTY 132 VR +C + TF + P +F + Y G+ S+ + +V T+Y+ + Sbjct: 69 --VRFRKK--MCEYLTMTFVPSPQPGEFTLGNIKNYPGLTSYFVR------VVSTNYNQH 118 Query: 133 AVQY 136 A+ + Sbjct: 119 AMVF 122 >2ACO-A nrPDB Length = 173 Score = 32.7 bits (73), Expect = 0.11, Method: Compositional matrix adjust. Identities = 22/82 (26%), Positives = 37/82 (45%), Gaps = 1/82 (1%) Query: 29 VKENFDKARFSGTWYAMAKKDPEGLFLQDNIVAEFSVDETGQMSATAKGRVRLLNNWDVC 88 V NFD R+ GTWY +A+ D + + A +S+ + G ++ KG W Sbjct: 26 VVNNFDAKRYLGTWYEIARFDHRFERGLEKVTATYSLRDDGGLNVINKGYNPDRGMWQ-Q 84 Query: 89 ADMVGTFTDTEDPAKFKMKYWG 110 ++ FT A K+ ++G Sbjct: 85 SEGKAYFTGAPTRAALKVSFFG 106 >2RD7-C nrPDB Length = 184 Score = 32.3 bits (72), Expect = 0.13, Method: Compositional matrix adjust. Identities = 28/114 (24%), Positives = 49/114 (42%), Gaps = 8/114 (7%) Query: 24 VSSFRVKENFDKARFSGTWYAMAKKDPEGLFLQDNIVAEFSVDETG-QMSATAKGRVRLL 82 +S+ + K NFD +F+GTW +A + AE + Q +A A R L Sbjct: 15 ISTIQPKANFDAQQFAGTWLLVAVGSACRFLQEQGHRAEATTLHVAPQGTAMAVSTFRKL 74 Query: 83 NNWDVCADMVGTFTDTEDPAKFKMKYWGVASFLQKGNDDHWIVDTDYDTYAVQY 136 + +C + + DT +F ++ +G + +TDY ++AV Y Sbjct: 75 DG--ICWQVRQLYGDTGVLGRFLLQARDA-----RGAVHVVVAETDYQSFAVLY 121 >3MBT-A nrPDB Length = 168 Score = 32.3 bits (72), Expect = 0.15, Method: Compositional matrix adjust. Identities = 22/82 (26%), Positives = 37/82 (45%), Gaps = 1/82 (1%) Query: 29 VKENFDKARFSGTWYAMAKKDPEGLFLQDNIVAEFSVDETGQMSATAKGRVRLLNNWDVC 88 V NFD R+ GTWY +A+ D + + A +S+ + G ++ KG W Sbjct: 12 VVNNFDAKRYLGTWYEIARFDHRFERGLEKVTATYSLRDDGGLNVINKGYNPDRGMWQ-Q 70 Query: 89 ADMVGTFTDTEDPAKFKMKYWG 110 ++ FT A K+ ++G Sbjct: 71 SEGKAYFTGAPTRAALKVSFFG 92 >4K6M-A nrPDB Length = 915 Score = 32.0 bits (71), Expect = 0.19, Method: Compositional matrix adjust. Identities = 30/93 (32%), Positives = 44/93 (47%), Gaps = 11/93 (11%) Query: 13 LGSG-RAERDCRVSSF--RVKENFDKAR--FSGTWYAMAKKDPEGLFLQDNIVAEFSVDE 67 LGSG RA V S ++K+ K + F+ TW+ KDPE + + V Sbjct: 260 LGSGTRAVGKGEVHSNQEKIKKRIQKLKEEFATTWH----KDPEHPYRTWTYHGSYEVKA 315 Query: 68 TGQMSATAKGRVRLLNN-WDVCADMVG-TFTDT 98 TG S+ G V+L++ WD A++ TDT Sbjct: 316 TGSASSLVNGVVKLMSKPWDAIANVTTMAMTDT 348 >2K23-A nrPDB Length = 178 Score = 31.6 bits (70), Expect = 0.21, Method: Compositional matrix adjust. Identities = 25/117 (21%), Positives = 50/117 (42%), Gaps = 15/117 (12%) Query: 26 SFRVKENFDKARFSGTWYAMA------KKDPEGLFLQDNIVAEFSVDETGQMSATAKGRV 79 S ++ F RF G W+ + +K+ + F + + E D + +++ Sbjct: 15 SVPLQPGFWTERFQGRWFVVGLAGNAVQKERQSRFTMYSTIYELQEDNSYNVTS------ 68 Query: 80 RLLNNWDVCADMVGTFTDTEDPAKFKMKYWGVASFLQKGNDDHWIVDTDYDTYAVQY 136 +L C + TF + P +F + + S+ Q + D + DTDYD +A+ + Sbjct: 69 -ILVRGQGCRYWIRTFVPSSRPGQFTLG--NIHSYPQIQSYDVQVADTDYDQFAMVF 122 >1EW3-A nrPDB Length = 159 Score = 31.6 bits (70), Expect = 0.23, Method: Compositional matrix adjust. Identities = 36/158 (22%), Positives = 63/158 (39%), Gaps = 40/158 (25%) Query: 32 NFDKARFSGTWYAMAKKDPEGLFLQDNIVAEFSVDETGQMSATAKGRVRLLNNWDV---- 87 NFD ++ SG WY+ +FL ++ + ++E G M +R L+N + Sbjct: 5 NFDISKISGEWYS--------IFLASDVKEK--IEENGSMRVFV-DVIRALDNSSLYAEY 53 Query: 88 -------CADMVGTFTDTEDPAKFKMKY--WGVASFLQKGNDDHWIVDTDYDTYAVQYSC 138 C + F TE+ + + Y + V + ND+H I+ Sbjct: 54 QTKVNGECTEFPMVFDKTEEDGVYSLNYDGYNVFRISEFENDEHIIL------------- 100 Query: 139 RLLNLDGTCADSYSFVFSRDPNGLP---PEAQKIVRQR 173 L+N D ++R+P+ P E KIV++R Sbjct: 101 YLVNFDKDRPFQLFEFYAREPDVSPEIKEEFVKIVQKR 138 >3DTQ-A nrPDB Length = 186 Score = 31.6 bits (70), Expect = 0.24, Method: Compositional matrix adjust. Identities = 29/126 (23%), Positives = 54/126 (42%), Gaps = 29/126 (23%) Query: 24 VSSFRVKENFDKARFSGTWYAMAK---------KDPEGLFLQDNIVAEFSVDETGQMSAT 74 +S +++NF +F G WY + + KDP+ + Q + E D++ ++A Sbjct: 13 LSKVPLQQNFQDNQFHGKWYQVGRAGNAALREDKDPQKMTAQ---IYELKEDKSYNVTAV 69 Query: 75 AKGRVRLLNNWDVCADMVGTFTDTEDPAKFKM----KYWGVASFLQKGNDDHWIVDTDYD 130 R R C TF P +F + Y G+ S+L + +V T+Y+ Sbjct: 70 ---RFR----KKKCDYATMTFVPGSQPGEFTLGNIKSYPGLTSYLVR------VVSTNYN 116 Query: 131 TYAVQY 136 +A+ + Sbjct: 117 QHAMVF 122 >4HDG-A nrPDB Length = 639 Score = 31.6 bits (70), Expect = 0.25, Method: Compositional matrix adjust. Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 6/66 (9%) Query: 35 KARFSGTWYAMAKKDPEGLFLQDNIVAEFSVDETGQMSATAKGRVRLLNN-WDVCADMVG 93 K F+ TW+ KDPE + + V TG S+ G V+L++ WD A++ Sbjct: 21 KEEFATTWH----KDPEHPYRTWTYHGSYEVKATGSASSLVNGVVKLMSKPWDAIANVTT 76 Query: 94 -TFTDT 98 TDT Sbjct: 77 MAMTDT 82 >5MHH-A nrPDB Length = 188 Score = 31.6 bits (70), Expect = 0.27, Method: Compositional matrix adjust. Identities = 26/126 (20%), Positives = 54/126 (42%), Gaps = 29/126 (23%) Query: 24 VSSFRVKENFDKARFSGTWYAMA---------KKDPEGLFLQDNIVAEFSVDETGQMSAT 74 +S +++NF +F G WY + KDP+ +F + E D++ +++ Sbjct: 13 LSKVPLQQNFQDNQFHGKWYVVGFAGNAILREDKDPQKMFA---TIYELKEDKSYNVTSV 69 Query: 75 AKGRVRLLNNWDVCADMVGTFTDTEDPAKFKM----KYWGVASFLQKGNDDHWIVDTDYD 130 + + C + TF P +F + Y G+ S+L + +V T+Y+ Sbjct: 70 LFRKKK-------CDYWIRTFVPGSQPGEFTLGNIKSYPGLTSYLVR------VVSTNYN 116 Query: 131 TYAVQY 136 +A+ + Sbjct: 117 QHAMVF 122 >5L7O-C nrPDB Length = 285 Score = 31.2 bits (69), Expect = 0.30, Method: Compositional matrix adjust. Identities = 27/89 (30%), Positives = 37/89 (41%), Gaps = 5/89 (5%) Query: 8 LLLAALGSGRAERDCRVSSFR-VKENFDKARFSGTWYAMAK----KDPEGLFLQDNIVAE 62 LL A G + R V +FR VK N+ R T++ D +G ++D V Sbjct: 106 LLAYATGFFKYWRGGLVYTFRFVKTNYHSGRVQITFHPFVGYDDVMDSDGKIVRDEYVYR 165 Query: 63 FSVDETGQMSATAKGRVRLLNNWDVCADM 91 VD Q AT L + VCAD+ Sbjct: 166 VVVDLRDQTEATLVVPFTSLTPYKVCADV 194 >3GTN-A nrPDB Length = 401 Score = 31.2 bits (69), Expect = 0.30, Method: Compositional matrix adjust. Identities = 16/49 (32%), Positives = 25/49 (51%) Query: 72 SATAKGRVRLLNNWDVCADMVGTFTDTEDPAKFKMKYWGVASFLQKGND 120 SA G + + W+ +DMV TF D + ++KY A++ Q ND Sbjct: 72 SAVKHGAIVFASPWNPPSDMVETFNRNGDTSAKRLKYNKYAAYAQHLND 120 >1JZU-A nrPDB Length = 157 Score = 31.2 bits (69), Expect = 0.32, Method: Compositional matrix adjust. Identities = 31/139 (22%), Positives = 54/139 (38%), Gaps = 12/139 (8%) Query: 34 DKARFSGTWYAMAKKDPEGLFLQDNIVAEFSVDETGQMSATAKGRVRLLNNWDVCADMVG 93 D++ +G WY +A FL++ + ++ + + + C Sbjct: 5 DRSEIAGKWYVVALASNTEFFLREKDKMKMAMARISFLGEDELKVSYAVPKPNGCRKWET 64 Query: 94 TFTDTEDPAKFKMKYWGVASFLQKGNDDHWIVDTDYDTYAVQYSCRLLNLDGTCADSYSF 153 TF T D G + ++ ++DTDY +YAV Y+ R+ DG Sbjct: 65 TFKKTSDD--------GEVYYSEEAKKKVEVLDTDYKSYAVIYATRV--KDGRTLHMMRL 114 Query: 154 VFSRDPNGLPPEAQKIVRQ 172 +SR P + P A I R+ Sbjct: 115 -YSRSPE-VSPAATAIFRK 131 >4GH7-A nrPDB Length = 188 Score = 31.2 bits (69), Expect = 0.35, Method: Compositional matrix adjust. Identities = 30/130 (23%), Positives = 57/130 (43%), Gaps = 29/130 (22%) Query: 24 VSSFRVKENFDKARFSGTWYAMAK---------KDPEGLFLQDNIVAEFSVDETGQMSAT 74 +S +++NF +F G WY + K KDP + + E D++ ++ Sbjct: 13 LSKVPLQQNFQDNQFHGKWYVVGKAGNHDLREDKDPRKM---QATIYELKEDKSYNVT-- 67 Query: 75 AKGRVRLLNNWDVCADMVGTFTDTEDPAKFKM---KYW-GVASFLQKGNDDHWIVDTDYD 130 VR ++ C + TF P +F + K W G+ S+L + +V T+Y+ Sbjct: 68 ---NVRFVH--KKCNYRIWTFVPGSQPGEFTLGNIKSWPGLTSWLVR------VVSTNYN 116 Query: 131 TYAVQYSCRL 140 +A+ + R+ Sbjct: 117 QHAMVFFKRV 126 >1OBQ-A nrPDB Length = 181 Score = 30.8 bits (68), Expect = 0.37, Method: Compositional matrix adjust. Identities = 18/37 (48%), Positives = 23/37 (62%), Gaps = 2/37 (5%) Query: 124 IVDTDYDTYAVQYSCRLLNLDGTCADSYSFVFSRDPN 160 I++TDY YA YSC N G +D +SF+FSR N Sbjct: 107 ILETDYSNYACLYSCIDYNF-GYHSD-FSFIFSRSAN 141 >1GM6-A nrPDB Length = 175 Score = 30.8 bits (68), Expect = 0.37, Method: Compositional matrix adjust. Identities = 37/172 (21%), Positives = 69/172 (40%), Gaps = 41/172 (23%) Query: 29 VKENFDKARFSGTWYAMAKKDPEGLFLQDNIVAEFSVDETGQMSATAKGRVRLLNNWDV- 87 V NFD ++ +G WY++ L D A+ +++E G M + +R+L+N + Sbjct: 9 VTSNFDASKIAGEWYSI-------LLASD---AKENIEENGSMRVFVE-HIRVLDNSSLA 57 Query: 88 ----------CADMVGTFTDTEDPAKFKMKYWGVASFLQKGNDDHWIVDTDYDTYAVQYS 137 C D D + + Y+G F +++ +Y Y + + Sbjct: 58 FKFQRKVNGECTDFYAVCDKVGDGV-YTVAYYGENKF--------RLLEVNYSDYVILH- 107 Query: 138 CRLLNLDGTCADSYSFVFSRDPNGLPPEAQKIVRQRQEELCLARQYRLIVHN 189 L++++G + R P+ P K V E+C +QY +I N Sbjct: 108 --LVDVNGDKTFQLMEFYGRKPDVEPKLKDKFV-----EIC--QQYGIIKEN 150 >5X7Y-A nrPDB Length = 177 Score = 29.6 bits (65), Expect = 0.80, Method: Compositional matrix adjust. Identities = 38/169 (22%), Positives = 66/169 (39%), Gaps = 39/169 (23%) Query: 14 GSGRAERDCRVSSFRVKENFDKARFSGTWYAMAKKDPEGLFLQDNIVAEFSVDETGQMSA 73 GS E D VK NFD ++ SG WY+ + L +I + ++E G M Sbjct: 1 GSHEEENDV------VKGNFDISKISGDWYS--------ILLASDIKEK--IEENGSMRV 44 Query: 74 TAKGRVRLLNNWDV-----------CADMVGTFTDTEDPAKFKMKYWGVASFLQKGNDDH 122 K + +L+N + C + TE ++ + + G F Sbjct: 45 FVKD-IEVLSNSSLIFTMHTKVNGKCTKISLICNKTEKDGEYDVVHDGYNLF-------- 95 Query: 123 WIVDTDYDTYAVQYSCRLLNLDGTCADSYSFVFSRDPNGLPPEAQKIVR 171 I++T Y+ Y + + L N++ ++ R P+ P +K VR Sbjct: 96 RIIETAYEDYIIFH---LNNVNQEQEFQLMELYGRKPDVSPKVKEKFVR 141 >1Z24-A nrPDB Length = 189 Score = 29.6 bits (65), Expect = 0.87, Method: Compositional matrix adjust. Identities = 31/109 (28%), Positives = 46/109 (42%), Gaps = 8/109 (7%) Query: 32 NFDKARFSGTWYAMAKKDPEGLFLQDNIVAEFSVDETGQMSATAKGRVRLLNNWDVCADM 91 +FD + F+G W+ +AK E +AE+ D G+ ++ V V M Sbjct: 17 DFDLSAFAGAWHEIAKLPLENENQGKCTIAEYKYD--GKKASVYNSFVSN----GVKEYM 70 Query: 92 VGTFTDTEDPAKFKM-KYWGVASFLQKG-NDDHWIVDTDYDTYAVQYSC 138 G D K KY F Q+ N W++ TDY YA+ Y+C Sbjct: 71 EGDLEIAPDAKYTKQGKYVMTFKFGQRVVNLVPWVLATDYKNYAINYNC 119 >5N47-A nrPDB Length = 188 Score = 29.3 bits (64), Expect = 1.3, Method: Compositional matrix adjust. Identities = 27/126 (21%), Positives = 54/126 (42%), Gaps = 29/126 (23%) Query: 24 VSSFRVKENFDKARFSGTWYAMAK---------KDPEGLFLQDNIVAEFSVDETGQMSAT 74 +S +++NF +F G WY + + KDP ++ + E D++ +++ Sbjct: 13 LSKVPLQQNFQDNQFHGKWYVVGEAGNSLLREDKDPRKMYA---TIYELKEDKSYNVTS- 68 Query: 75 AKGRVRLLNNWDVCADMVGTFTDTEDPAKFKMKYW----GVASFLQKGNDDHWIVDTDYD 130 VR + C ++ TF P +F + G SFL + +V T+Y+ Sbjct: 69 ----VRFRSK--KCHYLIRTFVPGSQPGEFTLGLIKSKPGHTSFLVR------VVSTNYN 116 Query: 131 TYAVQY 136 +A+ + Sbjct: 117 QHAMVF 122 >1QWK-A nrPDB Length = 317 Score = 28.5 bits (62), Expect = 1.9, Method: Compositional matrix adjust. Identities = 22/55 (40%), Positives = 29/55 (52%), Gaps = 4/55 (7%) Query: 7 LLLLAALGSGRAERDCRVSSFRVKENFDKARFSGTWYAMAK----KDPEGLFLQD 57 +LL AL G A + R+KENF+ FS T +AK K+ + LFLQD Sbjct: 248 VLLRYALDRGCAILPKSIQENRIKENFEVFDFSLTEEDIAKLEESKNSQRLFLQD 302 >2L9C-A nrPDB Length = 176 Score = 28.5 bits (62), Expect = 2.1, Method: Compositional matrix adjust. Identities = 29/160 (18%), Positives = 67/160 (41%), Gaps = 13/160 (8%) Query: 23 RVSSFRVKENFDKARFSGTWYAMAKKDPEGLFLQDNIVAEFSVDETGQMSATAKGRVRLL 82 R + ++ NF+ + +G WY + + ++++ V+ + + + ++ Sbjct: 14 REEASSMERNFNVEKINGEWYTIMLATDKREKIEEHGSMRVFVEYIHVLENSLALKFHII 73 Query: 83 NNWDVCADMVGTFTDTEDPAKFKMKYWGVASFLQKGNDDHWIVDTDYDTYAVQYSCRLLN 142 N + C+++ TE ++ + Y G +F I+ TDYD Y + L+N Sbjct: 74 INEE-CSEIFLVADKTEKAGEYSVTYDGSNTF--------TILKTDYDNYIM---IHLIN 121 Query: 143 LDGTCADSYSFVFSRDPNGLPPEAQKIVRQRQEELCLARQ 182 ++ R+P+ L + ++ Q EE + R+ Sbjct: 122 KKDGETFQLMELYGREPD-LSSDIKEKFAQLSEEHGIVRE 160 >1EPB-A nrPDB Length = 164 Score = 28.1 bits (61), Expect = 2.4, Method: Compositional matrix adjust. Identities = 30/113 (26%), Positives = 47/113 (41%), Gaps = 22/113 (19%) Query: 29 VKENFDKARFSGTWYAMA---KKDPEGLFLQDNIVAEFSVDETGQMSATAKGRVRLLNNW 85 V ++FD ++F G WY +A K GL ++ ++ G M K + L Sbjct: 2 VVKDFDISKFLGFWYEIAFASKMGTPGLAHKE--------EKMGAMVVELKENLLALTTT 53 Query: 86 ----DVCADMVGTFTDTEDPAKFKMKYWGVASFLQKGNDDHWIVDTDYDTYAV 134 D C T T+ + PAKF++ G + + TDY TYA+ Sbjct: 54 YYSEDHCVLEKVTATEGDGPAKFQVTRLS-------GKKEVVVEATDYLTYAI 99 >5H9K-A nrPDB Length = 156 Score = 26.9 bits (58), Expect = 5.8, Method: Compositional matrix adjust. Identities = 42/161 (26%), Positives = 63/161 (39%), Gaps = 28/161 (17%) Query: 22 CRVSSFRVKENFDKARF-SGTWYAMAKKDPEGLFLQDNIVAEFSVDETG---QMSATAKG 77 C S ++ FD RF +G WY +D E + +TG Q++ K Sbjct: 10 CNALSGKIMSGFDANRFFTGDWYLTHSRDSE-------VPVRCEKYQTGSNLQLNFNGK- 61 Query: 78 RVRLLNNWDV-CADMVGTFTDTEDPAKFKMKYWGVASFLQKGNDDHWIVDTDYDTYAVQY 136 N DV C+ T + + F+ SF +V+TDY YA+ Y Sbjct: 62 ------NGDVKCSG--STVSGNQGFYSFQCTTTSGGSFTSY----MAVVETDYANYALLY 109 Query: 137 SCRLLNLDGTCADSYSFVFSRDPNGLPPEAQKIVRQRQEEL 177 C L T D++ +F+R +G P A + Q EL Sbjct: 110 RCGLYG-STTPKDNF-LLFNRQSSGEIP-AGLSTKLNQLEL 147 >4FDM-A nrPDB Length = 394 Score = 26.9 bits (58), Expect = 6.4, Method: Compositional matrix adjust. Identities = 14/44 (31%), Positives = 19/44 (43%), Gaps = 4/44 (9%) Query: 104 FKMKYWGVASFLQKGNDDHWIVDTDYDTYAVQYSCRLLNLDGTC 147 F KYWG +G+ + W+ D Y TY + N D C Sbjct: 31 FGFKYWGGV----RGDIEQWLNDNGYRTYTLAVGPLSSNWDRAC 70 >5HGQ-A nrPDB Length = 524 Score = 26.6 bits (57), Expect = 6.9, Method: Compositional matrix adjust. Identities = 23/94 (24%), Positives = 41/94 (43%), Gaps = 8/94 (8%) Query: 52 GLFLQDNIVAE-FSVDETGQMSATAK------GRVRLLNNWDVCADMVGTFTDTEDPAKF 104 G FL+ ++ F MS AK G + V ++V +T+ DP Sbjct: 384 GEFLEPTFISPTFLTGHPQIMSPLAKWHRSIPGLTERFELFVVTKEIVNAYTELNDPLTQ 443 Query: 105 KMKYWGVASFLQKGNDDHWIVDTDYDTYAVQYSC 138 ++++ A Q G+D+ +D +Y T A++Y Sbjct: 444 RLRFDEQAKQKQAGDDEAQNIDENYCT-ALEYGL 476 >4PZK-A nrPDB Length = 170 Score = 26.2 bits (56), Expect = 9.5, Method: Compositional matrix adjust. Identities = 20/63 (31%), Positives = 26/63 (41%), Gaps = 12/63 (19%) Query: 105 KMKYW-GVASFLQKGNDDHWIVDTDYDT---YAVQYSCRLLNLDGTCADSYSFVFSRDPN 160 K+ Y+ + F +K D + T Y A YS R Y FVF R+ N Sbjct: 57 KITYYDSIEEFYEKNKDGEFFYLTKYGEKAHTAFDYSKR--------EKDYYFVFGRETN 108 Query: 161 GLP 163 GLP Sbjct: 109 GLP 111 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 4PSQ-B nrPDB 340 3e-94 1FEM-A nrPDB 327 1e-90 1JYJ-A nrPDB 326 4e-90 1IIU-A nrPDB 302 7e-83 2HZQ-A nrPDB 149 8e-37 4R0B-A nrPDB 115 2e-26 Sequences not found previously or not previously below threshold: 1GKA-B nrPDB 60 7e-10 1EXS-A nrPDB 54 5e-08 1Z24-A nrPDB 54 5e-08 1OBQ-A nrPDB 51 3e-07 1BBP-A nrPDB 47 4e-06 1N0S-A nrPDB 44 4e-05 3MBT-A nrPDB 44 6e-05 2ACO-A nrPDB 44 6e-05 1JZU-A nrPDB 43 9e-05 1KXO-A nrPDB 42 1e-04 2L9C-A nrPDB 39 0.001 1EW3-A nrPDB 39 0.001 1EPB-A nrPDB 39 0.002 6GQZ-A nrPDB 38 0.002 2RD7-C nrPDB 38 0.002 5X7Y-A nrPDB 38 0.002 3SAO-A nrPDB 38 0.003 4IAX-A nrPDB 37 0.005 2K23-A nrPDB 37 0.005 3EBK-A nrPDB 37 0.006 4QAE-A nrPDB 36 0.009 1GM6-A nrPDB 36 0.011 4GH7-A nrPDB 36 0.011 3O22-A nrPDB 36 0.013 5N48-A nrPDB 35 0.028 3L4R-A nrPDB 34 0.031 3DTQ-A nrPDB 34 0.048 3KFG-A nrPDB 34 0.058 5MHH-A nrPDB 33 0.078 2E4J-A nrPDB 33 0.096 5H9K-A nrPDB 32 0.13 1AVG-I nrPDB 31 0.28 5N47-A nrPDB 30 0.44 4MVK-A nrPDB 30 0.54 4MVL-A nrPDB 30 0.82 4RUN-A nrPDB 30 0.92 6NU3-AX nrPDB 28 2.7 6IGZ-7 nrPDB 28 2.8 5NKN-A nrPDB 27 4.0 6BQ5-A nrPDB 27 5.0 >4PSQ-B nrPDB Length = 212 Score = 340 bits (871), Expect = 3e-94, Method: Composition-based stats. Identities = 184/186 (98%), Positives = 184/186 (98%) Query: 16 GRAERDCRVSSFRVKENFDKARFSGTWYAMAKKDPEGLFLQDNIVAEFSVDETGQMSATA 75 G ERDCRVSSFRVKENFDKARFSGTWYAMAKKDPEGLFLQDNIVAEFSVDETGQMSATA Sbjct: 27 GAMERDCRVSSFRVKENFDKARFSGTWYAMAKKDPEGLFLQDNIVAEFSVDETGQMSATA 86 Query: 76 KGRVRLLNNWDVCADMVGTFTDTEDPAKFKMKYWGVASFLQKGNDDHWIVDTDYDTYAVQ 135 KGRVRLLNNWDVCADMVGTFTDTEDPAKFKMKYWGVASFLQKGNDDHWIVDTDYDTYAVQ Sbjct: 87 KGRVRLLNNWDVCADMVGTFTDTEDPAKFKMKYWGVASFLQKGNDDHWIVDTDYDTYAVQ 146 Query: 136 YSCRLLNLDGTCADSYSFVFSRDPNGLPPEAQKIVRQRQEELCLARQYRLIVHNGYCDGR 195 YSCRLLNLDGTCADSYSFVFSRDPNGLPPEAQKIVRQRQEELCLARQYRLIVHNGYCDGR Sbjct: 147 YSCRLLNLDGTCADSYSFVFSRDPNGLPPEAQKIVRQRQEELCLARQYRLIVHNGYCDGR 206 Query: 196 SERNLL 201 SERNLL Sbjct: 207 SERNLL 212 >1FEM-A nrPDB Length = 183 Score = 327 bits (839), Expect = 1e-90, Method: Composition-based stats. Identities = 169/183 (92%), Positives = 177/183 (96%) Query: 19 ERDCRVSSFRVKENFDKARFSGTWYAMAKKDPEGLFLQDNIVAEFSVDETGQMSATAKGR 78 ERDCRVSSFRVKENFDKARF+GTWYAMAKKDPEGLFLQDNIVAEFSVDE G MSATAKGR Sbjct: 1 ERDCRVSSFRVKENFDKARFAGTWYAMAKKDPEGLFLQDNIVAEFSVDENGHMSATAKGR 60 Query: 79 VRLLNNWDVCADMVGTFTDTEDPAKFKMKYWGVASFLQKGNDDHWIVDTDYDTYAVQYSC 138 VRLLNNWDVCADMVGTFTDTEDPAKFKMKYWGVASFLQKGNDDHWI+DTDY+T+AVQYSC Sbjct: 61 VRLLNNWDVCADMVGTFTDTEDPAKFKMKYWGVASFLQKGNDDHWIIDTDYETFAVQYSC 120 Query: 139 RLLNLDGTCADSYSFVFSRDPNGLPPEAQKIVRQRQEELCLARQYRLIVHNGYCDGRSER 198 RLLNLDGTCADSYSFVF+RDP+G PE QKIVRQRQEELCLARQYRLI HNGYCDG+SER Sbjct: 121 RLLNLDGTCADSYSFVFARDPSGFSPEVQKIVRQRQEELCLARQYRLIPHNGYCDGKSER 180 Query: 199 NLL 201 N+L Sbjct: 181 NIL 183 >1JYJ-A nrPDB Length = 183 Score = 326 bits (836), Expect = 4e-90, Method: Composition-based stats. Identities = 180/183 (98%), Positives = 180/183 (98%) Query: 18 AERDCRVSSFRVKENFDKARFSGTWYAMAKKDPEGLFLQDNIVAEFSVDETGQMSATAKG 77 ERDCRVSSFRVKENFDKARFSGTWYAMAKKDPEGLFLQDNIVAEFSVDETGQMSATAKG Sbjct: 1 MERDCRVSSFRVKENFDKARFSGTWYAMAKKDPEGLFLQDNIVAEFSVDETGQMSATAKG 60 Query: 78 RVRLLNNWDVCADMVGTFTDTEDPAKFKMKYWGVASFLQKGNDDHWIVDTDYDTYAVQYS 137 RVRLLNN DVCADMVGTFTDTEDPAKFKMKY GVASFLQKGNDDHWIVDTDYDTYAVQYS Sbjct: 61 RVRLLNNLDVCADMVGTFTDTEDPAKFKMKYHGVASFLQKGNDDHWIVDTDYDTYAVQYS 120 Query: 138 CRLLNLDGTCADSYSFVFSRDPNGLPPEAQKIVRQRQEELCLARQYRLIVHNGYCDGRSE 197 CRLLNLDGTCADSYSFVFSRDPNGLPPEAQKIVRQRQEELCLARQYRLIVHNGYCDGRSE Sbjct: 121 CRLLNLDGTCADSYSFVFSRDPNGLPPEAQKIVRQRQEELCLARQYRLIVHNGYCDGRSE 180 Query: 198 RNL 200 RNL Sbjct: 181 RNL 183 >1IIU-A nrPDB Length = 174 Score = 302 bits (773), Expect = 7e-83, Method: Composition-based stats. Identities = 150/172 (87%), Positives = 163/172 (94%) Query: 21 DCRVSSFRVKENFDKARFSGTWYAMAKKDPEGLFLQDNIVAEFSVDETGQMSATAKGRVR 80 DCRVSSF+VKENFDK R+SGTWYAMAKKDPEGLFLQDN+VA+F+VDE GQMSATAKGRVR Sbjct: 2 DCRVSSFKVKENFDKNRYSGTWYAMAKKDPEGLFLQDNVVAQFTVDENGQMSATAKGRVR 61 Query: 81 LLNNWDVCADMVGTFTDTEDPAKFKMKYWGVASFLQKGNDDHWIVDTDYDTYAVQYSCRL 140 L NNWDVCADM+G+FTDTEDPAKFKMKYWGVASFLQKGNDDHW+VDTDYDTYA+ YSCR Sbjct: 62 LFNNWDVCADMIGSFTDTEDPAKFKMKYWGVASFLQKGNDDHWVVDTDYDTYALHYSCRE 121 Query: 141 LNLDGTCADSYSFVFSRDPNGLPPEAQKIVRQRQEELCLARQYRLIVHNGYC 192 LN DGTCADSYSFVFSRDP GLPPEAQKIVRQRQ +LCL R+YR+IVHNG+C Sbjct: 122 LNEDGTCADSYSFVFSRDPKGLPPEAQKIVRQRQIDLCLDRKYRVIVHNGFC 173 >2HZQ-A nrPDB Length = 174 Score = 149 bits (376), Expect = 8e-37, Method: Composition-based stats. Identities = 39/144 (27%), Positives = 69/144 (47%), Gaps = 23/144 (15%) Query: 29 VKENFDKARFSGTWYAMAKKDPEGLFLQDNIVAEFSVDETGQMSAT-----AKGRVRLLN 83 V+ENFD ++ G WY + +K P I A +S+ E G++ A G V + Sbjct: 11 VQENFDVNKYPGRWYEI-EKIPTTFENGRCIQANYSLMENGKIKVLNQELRADGTVNQI- 68 Query: 84 NWDVCADMVGTFTDTEDPAKFKMKY-WGVASFLQKGNDDHWIVDTDYDTYAVQYSCRLLN 142 + T + +PAK ++K+ W + S + I+ TDY+ YA+ YSC + Sbjct: 69 ------EGEATPVNLTEPAKLEVKFSWFMPS------APYHILATDYENYALVYSCT--S 114 Query: 143 LDGTCADSYSFVFSRDPNGLPPEA 166 + + ++++ +R+ LPPE Sbjct: 115 ISQSFHVDFAWILARN-VALPPET 137 >4R0B-A nrPDB Length = 169 Score = 115 bits (287), Expect = 2e-26, Method: Composition-based stats. Identities = 28/107 (26%), Positives = 50/107 (46%), Gaps = 11/107 (10%) Query: 28 RVKENFDKARFSGTWYAMAKKDPEGLFLQDNIVAEFSVDETGQMSATAKGRVRLLNNWD- 86 + K++ + + +GTW++MA E + L + A V T + +L+ W+ Sbjct: 4 QTKQDLELPKLAGTWHSMAMATNE-ISLMATLKAPLRVHITSLLPTPEDNLEIVLHRWEN 62 Query: 87 -VCADMVGTFTDTEDPAKFKMKYWGVASFLQKGNDDHWIVDTDYDTY 132 C + TE+P KFK+ Y VA ++ ++DTDYD + Sbjct: 63 NSCVEKKVLGEKTENPKKFKINY-TVA-------NEATLLDTDYDNF 101 >1GKA-B nrPDB Length = 174 Score = 59.8 bits (143), Expect = 7e-10, Method: Composition-based stats. Identities = 32/147 (21%), Positives = 55/147 (37%), Gaps = 12/147 (8%) Query: 23 RVSSFRVKENFDKARFSGTWYAMAKKDPEGLFLQDNIVAEFSVDETGQ-MSATAKGRVRL 81 + +S ++NFD R++G WY + + I + + T G Sbjct: 11 KCASVANQDNFDLRRYAGRWYQTHIIENAYQPVTRCIHSNYEYSTNDYGFKVTTAGFNP- 69 Query: 82 LNNWDVCADMVGTFTDTEDPAKFKMKYWGVASFLQKGNDDHWIVDTDYDTYAVQYSCRLL 141 N+ + D T A + V + +++TDY+TY+ YSC Sbjct: 70 -NDEYLKIDFKVYPTKEFPAAHMLIDAPSV------FAAPYEVIETDYETYSCVYSCITT 122 Query: 142 NLDGTCADSYSFVFSRDPNGLPPEAQK 168 + ++FVFSR P P +K Sbjct: 123 D---NYKSEFAFVFSRTPQTSGPAVEK 146 >1EXS-A nrPDB Length = 160 Score = 54.0 bits (128), Expect = 5e-08, Method: Composition-based stats. Identities = 24/105 (22%), Positives = 40/105 (38%), Gaps = 11/105 (10%) Query: 32 NFDKARFSGTWYAMAKKDPEGLFLQDNIVAEFSVDETGQMSATAKGRVRLLNNW--DVCA 89 D + +GTW+ +A + + L D + G LL D CA Sbjct: 9 ELDTQKVAGTWHTVAMAVSD-VSLLDAKSSPLKAYVEGLKPTPEGDLEILLQKRENDKCA 67 Query: 90 DMVGTFTDTEDPAKFKMKYWGVASFLQKGNDDHWIVDTDYDTYAV 134 V T+ PA FK+ + +++DTDYD++ + Sbjct: 68 QEVLLAKKTDIPAVFKIN--------ALDENQLFLLDTDYDSHLL 104 >1Z24-A nrPDB Length = 189 Score = 54.0 bits (128), Expect = 5e-08, Method: Composition-based stats. Identities = 29/140 (20%), Positives = 57/140 (40%), Gaps = 8/140 (5%) Query: 32 NFDKARFSGTWYAMAKKDPEGLFLQDNIVAEFSVDETGQMSATAKGRVRLLNNWDVCADM 91 +FD + F+G W+ +AK E +AE+ D G+ ++ V + D+ Sbjct: 17 DFDLSAFAGAWHEIAKLPLENENQGKCTIAEYKYD--GKKASVYNSFVSNGVKEYMEGDL 74 Query: 92 VGTF-TDTEDPAKFKMKYWGVASFLQKGNDDHWIVDTDYDTYAVQYSCRLLNLDGTCADS 150 K+ M + + N W++ TDY YA+ Y+C + D Sbjct: 75 EIAPDAKYTKQGKYVMTFKF---GQRVVNLVPWVLATDYKNYAINYNC-DYHPDKKAHSI 130 Query: 151 YSFVFSRDPNGLPPEAQKIV 170 ++++ S+ L +++V Sbjct: 131 HAWILSKSKV-LEGNTKEVV 149 >1OBQ-A nrPDB Length = 181 Score = 50.9 bits (120), Expect = 3e-07, Method: Composition-based stats. Identities = 26/132 (19%), Positives = 51/132 (38%), Gaps = 14/132 (10%) Query: 30 KENFDKARFSGTWYAMAKKDPEGLFLQDNIVAEFSVDETGQMSATAKGRVRLLNNWDVCA 89 ++ ++ ++G WY A + ++ + E+S G+ ++ + + Sbjct: 23 EQTPNRNSYAGVWYQFALTNNPYQLIEKCVRNEYSF----------DGKQFVIESTGIAY 72 Query: 90 DMVGTFTDTE-DPAKFKMKYWGVASFLQKGNDDHWIVDTDYDTYAVQYSCRLLNLDGTCA 148 D + + P F + + + I++TDY YA YSC N Sbjct: 73 DGNLLKRNGKLYPNPFGEPHLSI-DYENSFAAPLVILETDYSNYACLYSCIDYNFG--YH 129 Query: 149 DSYSFVFSRDPN 160 +SF+FSR N Sbjct: 130 SDFSFIFSRSAN 141 >1BBP-A nrPDB Length = 173 Score = 47.4 bits (111), Expect = 4e-06, Method: Composition-based stats. Identities = 28/142 (19%), Positives = 51/142 (35%), Gaps = 13/142 (9%) Query: 31 ENFDKARFSGTWYAMAKKDPEGLFLQDNIVAEFSVDETGQMSATAKGRVRLLNNWDVCAD 90 +NFD + + G W+ +AK AE+ T + + +++ + + Sbjct: 15 DNFDWSNYHGKWWEVAKYPNSVEKYGKCGWAEY----TPEGKSVKVSNYHVIHGKEYFIE 70 Query: 91 MVGTFTDTEDPAKF--KMKYWGVASFLQKGNDDHWIVDTDYDTYAVQYSCRLLNLDGTCA 148 K K+ Y GV + ++ TD Y + Y C+ + D Sbjct: 71 GTAYPVGDSKIGKIYHKLTYGGVTK-----ENVFNVLSTDNKNYIIGYYCK-YDEDKKGH 124 Query: 149 DSYSFVFSRDPNGLPPEAQKIV 170 + +V SR L EA+ V Sbjct: 125 QDFVWVLSRSKV-LTGEAKTAV 145 >1N0S-A nrPDB Length = 184 Score = 44.0 bits (102), Expect = 4e-05, Method: Composition-based stats. Identities = 32/143 (22%), Positives = 52/143 (36%), Gaps = 15/143 (10%) Query: 31 ENFDKARFSGTWYAMAKKDPEGLFLQDNIVAEFSVDETGQMSATAKGRVRLLNNWDVCAD 90 +NFD +++ G W+ +AK AE+ T +G+ ++ +DV Sbjct: 15 DNFDWSQYHGKWWEVAKYPSPNGKYGKCGWAEY----------TPEGKSVKVSRYDVIHG 64 Query: 91 MVGTFTDTEDP---AKFKMKYWGVASFLQKGNDDHWIVDTDYDTYAVQYSCRLLNLDGTC 147 T P +K Y ++ TD Y + YSCR + D Sbjct: 65 KEYFMEGTAYPVGDSKIGKIYHSRTVGGYTRKTVFNVLSTDNKNYIIGYSCR-YDEDKKG 123 Query: 148 ADSYSFVFSRDPNGLPPEAQKIV 170 + +V SR L EA+ V Sbjct: 124 HWDHVWVLSRSMV-LTGEAKTAV 145 >3MBT-A nrPDB Length = 168 Score = 43.6 bits (101), Expect = 6e-05, Method: Composition-based stats. Identities = 31/132 (23%), Positives = 51/132 (38%), Gaps = 15/132 (11%) Query: 29 VKENFDKARFSGTWYAMAKKDPEGLFLQDNIVAEFSVDETGQMSATAKGRVRLLNNWDVC 88 V NFD R+ GTWY +A+ D + + A +S+ + G ++ KG W Sbjct: 12 VVNNFDAKRYLGTWYEIARFDHRFERGLEKVTATYSLRDDGGLNVINKGYNPDRGMWQQ- 70 Query: 89 ADMVGTFTDTEDPAKFKMKYWGVASFLQKGNDDHWIVDTDYDTYAVQYSCRLLNLDGTCA 148 ++ FT A K+ ++G G + +D +Y V R Sbjct: 71 SEGKAYFTGAPTRAALKVSFFG----PFYGGYNVIALDREYRHALVSGPDR--------- 117 Query: 149 DSYSFVFSRDPN 160 Y ++ SR P Sbjct: 118 -DYLWILSRTPT 128 >2ACO-A nrPDB Length = 173 Score = 43.6 bits (101), Expect = 6e-05, Method: Composition-based stats. Identities = 29/132 (21%), Positives = 50/132 (37%), Gaps = 15/132 (11%) Query: 29 VKENFDKARFSGTWYAMAKKDPEGLFLQDNIVAEFSVDETGQMSATAKGRVRLLNNWDVC 88 V NFD R+ GTWY +A+ D + + A +S+ + G ++ KG W Sbjct: 26 VVNNFDAKRYLGTWYEIARFDHRFERGLEKVTATYSLRDDGGLNVINKGYNPDRGMWQQ- 84 Query: 89 ADMVGTFTDTEDPAKFKMKYWGVASFLQKGNDDHWIVDTDYDTYAVQYSCRLLNLDGTCA 148 ++ FT A K+ ++G + ++ D + Y C Sbjct: 85 SEGKAYFTGAPTRAALKVSFFG------PFYGGYNVIALDRE-YRHALVCGPDR------ 131 Query: 149 DSYSFVFSRDPN 160 Y ++ SR P Sbjct: 132 -DYLWILSRTPT 142 >1JZU-A nrPDB Length = 157 Score = 43.2 bits (100), Expect = 9e-05, Method: Composition-based stats. Identities = 30/139 (21%), Positives = 55/139 (39%), Gaps = 12/139 (8%) Query: 34 DKARFSGTWYAMAKKDPEGLFLQDNIVAEFSVDETGQMSATAKGRVRLLNNWDVCADMVG 93 D++ +G WY +A FL++ + ++ + + + C Sbjct: 5 DRSEIAGKWYVVALASNTEFFLREKDKMKMAMARISFLGEDELKVSYAVPKPNGCRKWET 64 Query: 94 TFTDTEDPAKFKMKYWGVASFLQKGNDDHWIVDTDYDTYAVQYSCRLLNLDGTCADSYSF 153 TF T D G + ++ ++DTDY +YAV Y+ R+ + T Sbjct: 65 TFKKTSDD--------GEVYYSEEAKKKVEVLDTDYKSYAVIYATRVKD-GRTLH--MMR 113 Query: 154 VFSRDPNGLPPEAQKIVRQ 172 ++SR P + P A I R+ Sbjct: 114 LYSRSPE-VSPAATAIFRK 131 >1KXO-A nrPDB Length = 184 Score = 42.4 bits (98), Expect = 1e-04, Method: Composition-based stats. Identities = 27/140 (19%), Positives = 50/140 (35%), Gaps = 9/140 (6%) Query: 31 ENFDKARFSGTWYAMAKKDPEGLFLQDNIVAEFSVDETGQMSATAKGRVRLLNNWDVCAD 90 +NFD +++ G W+ +A AE+ T + + R +++ + ++ Sbjct: 15 DNFDWSQYHGKWWQVAAYPDHITKYGKCGWAEY----TPEGKSVKVSRYSVIHGKEYFSE 70 Query: 91 MVGTFTDTEDPAKFKMKYWGVASFLQKGNDDHWIVDTDYDTYAVQYSCRLLNLDGTCADS 150 K Y + Q+G ++ TD Y + Y C + D Sbjct: 71 GTAYPVGDSKIGKIYHSY-TIGGVTQEGV--FNVLSTDNKNYIIGYFCS-YDEDKKGHMD 126 Query: 151 YSFVFSRDPNGLPPEAQKIV 170 +V SR L EA+ V Sbjct: 127 LVWVLSRSMV-LTGEAKTAV 145 >2L9C-A nrPDB Length = 176 Score = 39.3 bits (90), Expect = 0.001, Method: Composition-based stats. Identities = 23/119 (19%), Positives = 44/119 (36%), Gaps = 19/119 (15%) Query: 23 RVSSFRVKENFDKARFSGTWYAMAKKDP-----EGLFLQDNIVAEFSVDETGQMSATAKG 77 R + ++ NF+ + +G WY + E V V E A Sbjct: 14 REEASSMERNFNVEKINGEWYTIMLATDKREKIEEHGSMRVFVEYIHVLENS----LALK 69 Query: 78 RVRLLNNWDVCADMVGTFTDTEDPAKFKMKYWGVASFLQKGNDDHWIVDTDYDTYAVQY 136 ++N + C+++ TE ++ + Y G++ I+ TDYD Y + + Sbjct: 70 FHIIIN--EECSEIFLVADKTEKAGEYSVTY--------DGSNTFTILKTDYDNYIMIH 118 >1EW3-A nrPDB Length = 159 Score = 39.0 bits (89), Expect = 0.001, Method: Composition-based stats. Identities = 39/150 (26%), Positives = 66/150 (44%), Gaps = 22/150 (14%) Query: 31 ENFDKARFSGTWYAMAKKDPEGLFLQDNIVAEFSVDETGQMSATAKGRVRLLNNWDVCAD 90 NFD ++ SG WY++ FL ++ ++E G M +R L+N + A+ Sbjct: 4 RNFDISKISGEWYSI--------FLASDVKE--KIEENGSMRVFVD-VIRALDNSSLYAE 52 Query: 91 --MVGTFTDTEDPAKF-KMKYWGVASFLQKGNDDHWIVDTDYDTYAVQYSCRLLNLDGTC 147 TE P F K + GV S G + I + + D + + Y L+N D Sbjct: 53 YQTKVNGECTEFPMVFDKTEEDGVYSLNYDGYNVFRISEFENDEHIILY---LVNFDKDR 109 Query: 148 ADSYSFVFSRDPNGLPPEAQ----KIVRQR 173 ++R+P+ + PE + KIV++R Sbjct: 110 PFQLFEFYAREPD-VSPEIKEEFVKIVQKR 138 >1EPB-A nrPDB Length = 164 Score = 38.6 bits (88), Expect = 0.002, Method: Composition-based stats. Identities = 24/107 (22%), Positives = 41/107 (38%), Gaps = 8/107 (7%) Query: 29 VKENFDKARFSGTWYAMAKKDPEGLFLQDNIVAEFSVDETGQMSATAKGRVRLLNNWDVC 88 V ++FD ++F G WY +A G + + ++ + D C Sbjct: 2 VVKDFDISKFLGFWYEIAFASKMGTPGLAHKEEKMGAMVV-ELKENLLALTTTYYSEDHC 60 Query: 89 ADMVGTFTDTEDPAKFKMKYWGVASFLQKGNDDHWIVDTDYDTYAVQ 135 T T+ + PAKF++ G + + TDY TYA+ Sbjct: 61 VLEKVTATEGDGPAKFQVT-------RLSGKKEVVVEATDYLTYAII 100 >6GQZ-A nrPDB Length = 174 Score = 38.2 bits (87), Expect = 0.002, Method: Composition-based stats. Identities = 25/121 (20%), Positives = 50/121 (41%), Gaps = 19/121 (15%) Query: 24 VSSFRVKENFDKARFSGTWYAMAKKDP----EGLFLQDNIVAEFSVDETGQMSATAKGRV 79 +S +++NF +F G WY + + E I + + E + T Sbjct: 9 LSKVPLQQNFQDNQFHGKWYVVGFAENIQQREDKDPPKMIATIYELKEDKSYNVT----- 63 Query: 80 RLLNNWDVCADMVGTFTDTEDPAKFKM----KYWGVASFLQKGNDDHWIVDTDYDTYAVQ 135 + +NW+ C + TF P +F + G+ S+L + +V T+Y+ +A+ Sbjct: 64 NVASNWEKCTYRIKTFVPGSQPGEFTLGEIKSRPGMTSYLVR------VVSTNYNQHAMV 117 Query: 136 Y 136 + Sbjct: 118 F 118 >2RD7-C nrPDB Length = 184 Score = 38.2 bits (87), Expect = 0.002, Method: Composition-based stats. Identities = 39/179 (21%), Positives = 71/179 (39%), Gaps = 15/179 (8%) Query: 24 VSSFRVKENFDKARFSGTWYAMAKKDPEGLFLQDNIVAE-FSVDETGQMSATAKGRVRLL 82 +S+ + K NFD +F+GTW +A + AE ++ Q +A A R L Sbjct: 15 ISTIQPKANFDAQQFAGTWLLVAVGSACRFLQEQGHRAEATTLHVAPQGTAMAVSTFRKL 74 Query: 83 NNWDVCADMVGTFTDTEDPAKFKMKYWGVASFLQKGNDDHWIVDTDYDTYAVQYSCRLLN 142 + +C + + DT +F ++ + +G + +TDY ++AV Y R Sbjct: 75 DG--ICWQVRQLYGDTGVLGRFLLQ-----ARDARGAVHVVVAETDYQSFAVLYLERAGQ 127 Query: 143 LDGTCADSYSFVFSRDPNGLPPEAQKIVRQRQEELCLARQYRLIVHNGYCDGRSERNLL 201 L Y+ + L Q++ QE Q G+C+ + ++L Sbjct: 128 LSVKL---YARSLPVSDSVLSGFEQRV----QEAHLTEDQIFYFPKYGFCEAADQFHVL 179 >5X7Y-A nrPDB Length = 177 Score = 38.2 bits (87), Expect = 0.002, Method: Composition-based stats. Identities = 32/151 (21%), Positives = 57/151 (37%), Gaps = 21/151 (13%) Query: 29 VKENFDKARFSGTWYAM--AKKDPEGLF---LQDNIVAEFSVDETGQMSATAKGRVRLLN 83 VK NFD ++ SG WY++ A E + V + V + T +V Sbjct: 10 VKGNFDISKISGDWYSILLASDIKEKIEENGSMRVFVKDIEVLSNSSLIFTMHTKVN--- 66 Query: 84 NWDVCADMVGTFTDTEDPAKFKMKYWGVASFLQKGNDDHWIVDTDYDTYAVQYSCRLLNL 143 C + TE ++ + + G + I++T Y+ Y + + L N+ Sbjct: 67 --GKCTKISLICNKTEKDGEYDV--------VHDGYNLFRIIETAYEDYIIFH---LNNV 113 Query: 144 DGTCADSYSFVFSRDPNGLPPEAQKIVRQRQ 174 + ++ R P+ P +K VR Q Sbjct: 114 NQEQEFQLMELYGRKPDVSPKVKEKFVRYCQ 144 >3SAO-A nrPDB Length = 160 Score = 37.8 bits (86), Expect = 0.003, Method: Composition-based stats. Identities = 29/143 (20%), Positives = 52/143 (36%), Gaps = 12/143 (8%) Query: 34 DKARFSGTWYAMAKKDPEGLFLQDNIVAEFSVDETGQMSATAKGRVRLLNNWDVCADMVG 93 D++ +G WY +A FL + + + + + C Sbjct: 4 DRSEVAGKWYIVALASNTDFFLAEKGKMKMVMARISFLGEDELEVSYAAPSPKGCRKWET 63 Query: 94 TFTDTEDPAKFKMKYWGVASFLQKGNDDHWIVDTDYDTYAVQYSCRLLNLDGTCADSYSF 153 TF T D G + ++ ++DTDY +YAV ++ R+ + T + Sbjct: 64 TFKKTSDD--------GEVYYSEEAEKTVEVLDTDYKSYAVIFATRVKD-GRTLHMMRLY 114 Query: 154 VFSRDPNGLPPEAQKIVRQRQEE 176 SR+ + P A I R+ E Sbjct: 115 SRSRE---VSPTAMAIFRKLARE 134 >4IAX-A nrPDB Length = 188 Score = 37.0 bits (84), Expect = 0.005, Method: Composition-based stats. Identities = 27/124 (21%), Positives = 51/124 (41%), Gaps = 25/124 (20%) Query: 24 VSSFRVKENFDKARFSGTWYAMAKK-------DPEGLFLQDNIVAEFSVDETGQMSATAK 76 +S +++NF +F G WY + + DPE L L + + E TA Sbjct: 13 LSKVPLQQNFQDNQFHGKWYQVGRAGNAAPPMDPELLLLTAQ---TYELKEDKSYDVTA- 68 Query: 77 GRVRLLNNWDVCADMVGTFTDTEDPAKFKM----KYWGVASFLQKGNDDHWIVDTDYDTY 132 + +C + TF + P +F + Y G+ S+ + +V T+Y+ + Sbjct: 69 ----VRFRKKMCEYLTMTFVPSPQPGEFTLGNIKNYPGLTSYFVR------VVSTNYNQH 118 Query: 133 AVQY 136 A+ + Sbjct: 119 AMVF 122 >2K23-A nrPDB Length = 178 Score = 37.0 bits (84), Expect = 0.005, Method: Composition-based stats. Identities = 24/114 (21%), Positives = 44/114 (38%), Gaps = 9/114 (7%) Query: 26 SFRVKENFDKARFSGTWYAMAKKDPEGLFLQDNIVAEFSVDETGQMSATAKGRVRL---L 82 S ++ F RF G W+ + +Q + F++ T + L Sbjct: 15 SVPLQPGFWTERFQGRWFVVGLAGN---AVQKERQSRFTMYST-IYELQEDNSYNVTSIL 70 Query: 83 NNWDVCADMVGTFTDTEDPAKFKMKYWGVASFLQKGNDDHWIVDTDYDTYAVQY 136 C + TF + P +F + + S+ Q + D + DTDYD +A+ + Sbjct: 71 VRGQGCRYWIRTFVPSSRPGQFTLG--NIHSYPQIQSYDVQVADTDYDQFAMVF 122 >3EBK-A nrPDB Length = 176 Score = 37.0 bits (84), Expect = 0.006, Method: Composition-based stats. Identities = 22/107 (20%), Positives = 35/107 (32%), Gaps = 13/107 (12%) Query: 32 NFDKARFSGTWYAMAKKDPEGLFLQDNIVAEFSVDETGQMSATAKGRVRLLNNWDVCADM 91 N D RF G+W +A E L + FS D V + Sbjct: 19 NLDYERFRGSWI-IAAGTSEALTQYKCWIDRFSYD---------DALVSKYTDSQGKNRT 68 Query: 92 VGTFTDTEDPAKFKMKYWGVASFLQKGNDDHWIVDTDYDTYAVQYSC 138 + KF + Y + + + ++ TDY+ YA+ C Sbjct: 69 TIRGRTKFEGNKFTIDY---NDKGKAFSAPYSVLATDYENYAIVEGC 112 >4QAE-A nrPDB Length = 188 Score = 36.3 bits (82), Expect = 0.009, Method: Composition-based stats. Identities = 22/114 (19%), Positives = 49/114 (42%), Gaps = 5/114 (4%) Query: 24 VSSFRVKENFDKARFSGTWYAMAKKDPEGL-FLQDNIVAEFSVDETGQMSATAKGRVRLL 82 +S +++NF +F G WY + E L +D + ++ E + + ++ Sbjct: 13 LSKVPLQQNFQDNQFHGKWYVVGLAGNEVLREDKDPMKMWATIYELEEDKSY--NVTIVM 70 Query: 83 NNWDVCADMVGTFTDTEDPAKFKMKYWGVASFLQKGNDDHWIVDTDYDTYAVQY 136 + C + TF P +F + G+ S + + +V T+Y+ +A+ + Sbjct: 71 PLAEKCEYLFQTFVPGSQPGEFTLG--GIKSGPGRTSGLVRVVSTNYNQHAMVF 122 >1GM6-A nrPDB Length = 175 Score = 35.9 bits (81), Expect = 0.011, Method: Composition-based stats. Identities = 34/166 (20%), Positives = 63/166 (37%), Gaps = 29/166 (17%) Query: 29 VKENFDKARFSGTWYAM-----AKKDPEGLFLQDNIVAEFSVDETGQMSATAKGRVRLLN 83 V NFD ++ +G WY++ AK++ E V V + ++ + +V Sbjct: 9 VTSNFDASKIAGEWYSILLASDAKENIEENGSMRVFVEHIRVLDNSSLAFKFQRKVN--- 65 Query: 84 NWDVCADMVGTFTDTEDPAKFKMKYWGVASFLQKGNDDHWIVDTDYDTYAVQYSCRLLNL 143 C D D GV + G + +++ +Y Y + + L+++ Sbjct: 66 --GECTDFYAVCDKVGD---------GVYTVAYYGENKFRLLEVNYSDYVILH---LVDV 111 Query: 144 DGTCADSYSFVFSRDPNGLPPEAQKIVRQRQEELCLARQYRLIVHN 189 +G + R P+ P K V E+C +QY +I N Sbjct: 112 NGDKTFQLMEFYGRKPDVEPKLKDKFV-----EIC--QQYGIIKEN 150 >4GH7-A nrPDB Length = 188 Score = 35.9 bits (81), Expect = 0.011, Method: Composition-based stats. Identities = 27/118 (22%), Positives = 53/118 (44%), Gaps = 13/118 (11%) Query: 24 VSSFRVKENFDKARFSGTWYAMAKKDPEGL-FLQDNIVAEFSVDETGQMSATAKGRVRLL 82 +S +++NF +F G WY + K L +D + ++ E + + VR + Sbjct: 13 LSKVPLQQNFQDNQFHGKWYVVGKAGNHDLREDKDPRKMQATIYELKEDKSYNVTNVRFV 72 Query: 83 NNWDVCADMVGTFTDTEDPAKF---KMKYW-GVASFLQKGNDDHWIVDTDYDTYAVQY 136 + C + TF P +F +K W G+ S+L + +V T+Y+ +A+ + Sbjct: 73 HK--KCNYRIWTFVPGSQPGEFTLGNIKSWPGLTSWLVR------VVSTNYNQHAMVF 122 >3O22-A nrPDB Length = 162 Score = 35.9 bits (81), Expect = 0.013, Method: Composition-based stats. Identities = 24/113 (21%), Positives = 42/113 (37%), Gaps = 13/113 (11%) Query: 29 VKENFDKARFSGTWYAMAKKDPEGLFLQDNIVAEFSVDETGQMSATAKGR--VRLLNNWD 86 V+ NF + +F G W++ A S+ ++ AT G + Sbjct: 2 VQPNFQQDKFLGRWFSAGLASNSSW--LREKKAALSMAKSVVAPATDGGLNLTSTFLRKN 59 Query: 87 VCAD--MVGTFTDTEDPAKFKMKYWGVASFLQKGNDDHWIVDTDYDTYAVQYS 137 C M+ + ++ +WG + +V+TDYD YA+ YS Sbjct: 60 QCETRTMLLQPAGSLGSYSYRSPHWGSTYSVS-------VVETDYDQYALLYS 105 >5N48-A nrPDB Length = 188 Score = 34.7 bits (78), Expect = 0.028, Method: Composition-based stats. Identities = 21/113 (18%), Positives = 45/113 (39%), Gaps = 3/113 (2%) Query: 24 VSSFRVKENFDKARFSGTWYAMAKKDPEGLFLQDNIVAEFSVDETGQMSATAKGRVRLLN 83 +S +++NF +F G WY + + L +D A+ + +++ Sbjct: 13 LSKVPLQQNFQDNQFHGKWYVVGRAGNMRLR-EDKDPAKMVATIYELKEDKSYNVTKVMF 71 Query: 84 NWDVCADMVGTFTDTEDPAKFKMKYWGVASFLQKGNDDHWIVDTDYDTYAVQY 136 C M+ TF P +F + + S + +V T+Y+ +A+ + Sbjct: 72 QRKKCKYMINTFVPGSQPGEFTLG--AIKSPPGPTSTLVRVVSTNYNQHAMVF 122 >3L4R-A nrPDB Length = 170 Score = 34.3 bits (77), Expect = 0.031, Method: Composition-based stats. Identities = 26/116 (22%), Positives = 42/116 (36%), Gaps = 17/116 (14%) Query: 35 KARFSGTWYAMAKKDPEGLFLQDNIV--AEFSVDETGQMSATAKGR--VRLLNNWDVCAD 90 SG W+++A + D I F V MSA L+ C Sbjct: 12 LEELSGRWHSVALASNKS----DLIKPWGHFRVFIHS-MSAKDGNLHGDILIPQDGQCEK 66 Query: 91 MVGTFTDTEDPAKFKMKYWGVASFLQKGNDDHWIVDTDYDTYAVQYSCRLLNLDGT 146 + T T KF ++YW G++D ++ + D +Y + Y N D + Sbjct: 67 VSLTAFKTATSNKFDLEYW--------GHNDLYLAEVDPKSYLILYMINQYNDDTS 114 >3DTQ-A nrPDB Length = 186 Score = 34.0 bits (76), Expect = 0.048, Method: Composition-based stats. Identities = 25/121 (20%), Positives = 47/121 (38%), Gaps = 19/121 (15%) Query: 24 VSSFRVKENFDKARFSGTWYAMAKKDPEGL----FLQDNIVAEFSVDETGQMSATAKGRV 79 +S +++NF +F G WY + + L Q + + E + TA Sbjct: 13 LSKVPLQQNFQDNQFHGKWYQVGRAGNAALREDKDPQKMTAQIYELKEDKSYNVTA---- 68 Query: 80 RLLNNWDVCADMVGTFTDTEDPAKFKM----KYWGVASFLQKGNDDHWIVDTDYDTYAVQ 135 + C TF P +F + Y G+ S+L + +V T+Y+ +A+ Sbjct: 69 -VRFRKKKCDYATMTFVPGSQPGEFTLGNIKSYPGLTSYLVR------VVSTNYNQHAMV 121 Query: 136 Y 136 + Sbjct: 122 F 122 >3KFG-A nrPDB Length = 162 Score = 33.6 bits (75), Expect = 0.058, Method: Composition-based stats. Identities = 19/112 (16%), Positives = 36/112 (32%), Gaps = 25/112 (22%) Query: 31 ENFDKARFSGTWYAMAKKDP-----EGLFLQDNIVAEFSVDETG---QMSATAKGRVRLL 82 +N + + +G W+++ E V V E + G Sbjct: 8 QNLNVEKINGEWFSILLASDKREKIEEHGSMRVFVEHIHVLENSLAFKFHTVIDG----- 62 Query: 83 NNWDVCADMVGTFTDTEDPAKFKMKYWGVASFLQKGNDDHWIVDTDYDTYAV 134 C+++ TE ++ + Y G + I+ TDYD Y + Sbjct: 63 ----ECSEIFLVADKTEKAGEYSVMY--------DGFNTFTILKTDYDNYIM 102 >5MHH-A nrPDB Length = 188 Score = 33.2 bits (74), Expect = 0.078, Method: Composition-based stats. Identities = 23/117 (19%), Positives = 45/117 (38%), Gaps = 11/117 (9%) Query: 24 VSSFRVKENFDKARFSGTWYAMAKKDPEGLFLQDNIVAEFSVDETGQMSATAKGRVRLLN 83 +S +++NF +F G WY + L + F+ + +L Sbjct: 13 LSKVPLQQNFQDNQFHGKWYVVGFAGNAILREDKDPQKMFAT-IYELKEDKSYNVTSVLF 71 Query: 84 NWDVCADMVGTFTDTEDPAKFKM----KYWGVASFLQKGNDDHWIVDTDYDTYAVQY 136 C + TF P +F + Y G+ S+L + +V T+Y+ +A+ + Sbjct: 72 RKKKCDYWIRTFVPGSQPGEFTLGNIKSYPGLTSYLVR------VVSTNYNQHAMVF 122 >2E4J-A nrPDB Length = 167 Score = 32.8 bits (73), Expect = 0.096, Method: Composition-based stats. Identities = 24/109 (22%), Positives = 41/109 (37%), Gaps = 5/109 (4%) Query: 29 VKENFDKARFSGTWYAMAKKDPEGLFLQDNIVAEFSVDETGQMSATAKGRVRLLNNWDVC 88 V+ NF + +F G WY+ F + A + +T +T G L + + Sbjct: 8 VQPNFQQDKFLGRWYSAGLASNSSWFREK--KAVLYMCKTVVAPSTEGGL--NLTSTFLR 63 Query: 89 ADMVGTFTDTEDPAKFKMKYWGVASFLQKGNDDHWIVDTDYDTYAVQYS 137 + T PA Y +S +V+ +YD YA+ +S Sbjct: 64 KNQAETKIMVLQPAGAPGHY-TYSSPHSGSIHSVSVVEANYDEYALLFS 111 >5H9K-A nrPDB Length = 156 Score = 32.4 bits (72), Expect = 0.13, Method: Composition-based stats. Identities = 35/150 (23%), Positives = 51/150 (34%), Gaps = 31/150 (20%) Query: 22 CRVSSFRVKENFDKARF-SGTWYAMAKKDPE------GLFLQDNIVAEFSVDETGQMSAT 74 C S ++ FD RF +G WY +D E N+ F G+ Sbjct: 10 CNALSGKIMSGFDANRFFTGDWYLTHSRDSEVPVRCEKYQTGSNLQLNF----NGK---- 61 Query: 75 AKGRVRLLNNWDVCADMVGTFTDTEDPAKFKMKYWGVASFLQKGNDDHWIVDTDYDTYAV 134 G V+ + +F T Y V V+TDY YA+ Sbjct: 62 -NGDVKCSGSTVSGNQGFYSFQCTTTSGGSFTSYMAV-------------VETDYANYAL 107 Query: 135 QYSCRLLNLDGTCADSYSFVFSRDPNGLPP 164 Y C L T D++ +F+R +G P Sbjct: 108 LYRCGLYG-STTPKDNF-LLFNRQSSGEIP 135 >1AVG-I nrPDB Length = 142 Score = 31.3 bits (69), Expect = 0.28, Method: Composition-based stats. Identities = 16/87 (18%), Positives = 33/87 (37%), Gaps = 4/87 (4%) Query: 83 NNWDVCADMVGTFTDTEDPAKFKMKYWGVASFLQKGNDDHWIVDTDYDTYAVQYSCRLLN 142 N ++ D ++ ++ K +S + D + YD +A+ CR + Sbjct: 59 NKFESNVKFQCNQVDNKNGEQYSFK--CKSSDNTEFEADFTFISVSYDNFALV--CRSIT 114 Query: 143 LDGTCADSYSFVFSRDPNGLPPEAQKI 169 + VF R + P+A++I Sbjct: 115 FTSQPKEDRYLVFERTKSDTDPDAKEI 141 >5N47-A nrPDB Length = 188 Score = 30.5 bits (67), Expect = 0.44, Method: Composition-based stats. Identities = 22/114 (19%), Positives = 46/114 (40%), Gaps = 5/114 (4%) Query: 24 VSSFRVKENFDKARFSGTWYAMAKKDPEGL-FLQDNIVAEFSVDETGQMSATAKGRVRLL 82 +S +++NF +F G WY + + L +D ++ E + + VR Sbjct: 13 LSKVPLQQNFQDNQFHGKWYVVGEAGNSLLREDKDPRKMYATIYELKEDKSYNVTSVRF- 71 Query: 83 NNWDVCADMVGTFTDTEDPAKFKMKYWGVASFLQKGNDDHWIVDTDYDTYAVQY 136 C ++ TF P +F + + S + +V T+Y+ +A+ + Sbjct: 72 -RSKKCHYLIRTFVPGSQPGEFTLGL--IKSKPGHTSFLVRVVSTNYNQHAMVF 122 >4MVK-A nrPDB Length = 188 Score = 30.5 bits (67), Expect = 0.54, Method: Composition-based stats. Identities = 21/119 (17%), Positives = 48/119 (40%), Gaps = 15/119 (12%) Query: 24 VSSFRVKENFDKARFSGTWYAMAKKDPEGL------FLQDNIVAEFSVDETGQMSATAKG 77 +S +++NF +F G WY + + L + + E D++ +++ G Sbjct: 13 LSKVPLQQNFQDNQFHGKWYVVGVAGNKSLREDKDPWKMYATIYELKEDKSYNVTSVGFG 72 Query: 78 RVRLLNNWDVCADMVGTFTDTEDPAKFKMKYWGVASFLQKGNDDHWIVDTDYDTYAVQY 136 + C + TF P +F + + S + + +V T+Y+ +A+ + Sbjct: 73 TKK-------CHYKIRTFVPGSQPGEFTLGR--IKSRPGRTSALVRVVSTNYNQHAMVF 122 >4MVL-A nrPDB Length = 188 Score = 29.7 bits (65), Expect = 0.82, Method: Composition-based stats. Identities = 23/123 (18%), Positives = 47/123 (38%), Gaps = 23/123 (18%) Query: 24 VSSFRVKENFDKARFSGTWYAMA-------KKDPEGLFLQDNIVAEFSVDETGQMSATAK 76 +S +++NF +F G WY + ++D + L + I + + E + T+ Sbjct: 13 LSKVPLQQNFQDNQFHGKWYVVGAAGNVLLREDKDPLKMYATI---YELKEDKSYNVTSV 69 Query: 77 GRVRLLNNWDVCADMVGTFTDTEDPAKFKMKYWGVASFLQKGNDDHWI---VDTDYDTYA 133 G C + TF P +F + + W+ V T+Y+ +A Sbjct: 70 GFDD-----KKCLYKIRTFVPGSQPGEF-----TLGRIKSEPGGTSWLVRVVSTNYNQHA 119 Query: 134 VQY 136 + + Sbjct: 120 MVF 122 >4RUN-A nrPDB Length = 161 Score = 29.7 bits (65), Expect = 0.92, Method: Composition-based stats. Identities = 23/111 (20%), Positives = 35/111 (31%), Gaps = 13/111 (11%) Query: 33 FDKARFSGTWYAMAKKDPEGLFLQDNIVAEFSVDETGQMSATAKGRVRL-----LNNWDV 87 ++ +GTWY A + + + TA G L D Sbjct: 5 LEEEDITGTWYVKAMVVDKDFPEDR------RPRKVSPVKVTALGGGNLEATFTFMREDR 58 Query: 88 CADMVGTFTDTEDPAKFKMKYWGVASFLQK--GNDDHWIVDTDYDTYAVQY 136 C TE+P KF +LQ+ G DD+ D ++Y Sbjct: 59 CIQKKILMRKTEEPGKFSAYGGRKLIYLQELPGTDDYVFYSKDQRRGGLRY 109 >6NU3-AX nrPDB Length = 398 Score = 28.2 bits (61), Expect = 2.7, Method: Composition-based stats. Identities = 12/44 (27%), Positives = 19/44 (43%), Gaps = 1/44 (2%) Query: 20 RDCRVSSFRVKENFDKARFSGTWYAMAKKDPEGLFLQDNIVAEF 63 RD SS+ K+ FD+ + TW K E Q + ++ Sbjct: 166 RDLLQSSYN-KQRFDQPLEASTWLKNFKTTNERFLNQIKVQEKY 208 >6IGZ-7 nrPDB Length = 264 Score = 28.2 bits (61), Expect = 2.8, Method: Composition-based stats. Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 4/39 (10%) Query: 143 LDGTCADSYSFVFSRDPNGLPPEAQKIVRQRQEELCLAR 181 LDG+ A Y + DP GL + + + RQ EL +R Sbjct: 52 LDGSLAGDYGW----DPMGLSSDPKALAWYRQAELVHSR 86 >5NKN-A nrPDB Length = 174 Score = 27.4 bits (59), Expect = 4.0, Method: Composition-based stats. Identities = 21/117 (17%), Positives = 42/117 (35%), Gaps = 11/117 (9%) Query: 24 VSSFRVKENFDKARFSGTWYAMAKKDPEGL-FLQDNIVAEFSVDETGQMSATAKGRVRLL 82 +S +++NF +F G WY + L +D I ++ E + + Sbjct: 9 LSKVPLQQNFQDNQFHGKWYVVGVAGNGFLREDKDPIKMAATIYELKEDKSY--NVTFQK 66 Query: 83 NNWDVCADMVGTFTDTEDPAKFKMKYWGVASFLQKGNDDHWI---VDTDYDTYAVQY 136 C M T P +F + + + W+ V T+Y+ +A+ + Sbjct: 67 FPMKKCQYMTDTLVPGSQPGEF-----TLGNIKSEPGYTSWLVRVVSTNYNQHAMVF 118 >6BQ5-A nrPDB Length = 331 Score = 27.0 bits (58), Expect = 5.0, Method: Composition-based stats. Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 15/66 (22%) Query: 132 YAVQYSCRLLNLDGTCADSYSFVFSRD-PNGLPPEAQKIVRQRQEELCLARQYRLIVHNG 190 Y V YS + + AD + +V + D P L E I R RQ R+I N Sbjct: 243 YVVPYSAHIP----SYADIWGWVLASDSPLDLSAEELDI-RMRQ---------RIIEENR 288 Query: 191 YCDGRS 196 Y DG++ Sbjct: 289 YLDGKT 294 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.314 0.127 0.369 Lambda K H 0.267 0.0394 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 8,003,427 Number of Sequences: 36641 Number of extensions: 305717 Number of successful extensions: 774 Number of sequences better than 10.0: 52 Number of HSP's better than 10.0 without gapping: 36 Number of HSP's successfully gapped in prelim test: 60 Number of HSP's that attempted gapping in prelim test: 707 Number of HSP's gapped (non-prelim): 99 length of query: 201 length of database: 10,336,785 effective HSP length: 92 effective length of query: 109 effective length of database: 6,965,813 effective search space: 759273617 effective search space used: 759273617 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.5 bits) S2: 56 (26.2 bits)