BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= P02730 (911 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 4YZF-A nrPDB 1840 0.0 1HYN-P nrPDB 772 0.0 4KY9-A nrPDB 619 e-177 5SV9-A nrPDB 156 3e-38 5JHO-A nrPDB 155 5e-38 5L25-A nrPDB 115 6e-26 6J6Q-S nrPDB 33 0.56 3URR-A nrPDB 32 1.2 >4YZF-A nrPDB Length = 911 Score = 1840 bits (4765), Expect = 0.0, Method: Compositional matrix adjust. Identities = 911/911 (100%), Positives = 911/911 (100%) Query: 1 MEELQDDYEDMMEENLEQEEYEDPDIPESQMEEPAAHDTEATATDYHTTSHPGTHKVYVE 60 MEELQDDYEDMMEENLEQEEYEDPDIPESQMEEPAAHDTEATATDYHTTSHPGTHKVYVE Sbjct: 1 MEELQDDYEDMMEENLEQEEYEDPDIPESQMEEPAAHDTEATATDYHTTSHPGTHKVYVE 60 Query: 61 LQELVMDEKNQELRWMEAARWVQLEENLGENGAWGRPHLSHLTFWSLLELRRVFTKGTVL 120 LQELVMDEKNQELRWMEAARWVQLEENLGENGAWGRPHLSHLTFWSLLELRRVFTKGTVL Sbjct: 61 LQELVMDEKNQELRWMEAARWVQLEENLGENGAWGRPHLSHLTFWSLLELRRVFTKGTVL 120 Query: 121 LDLQETSLAGVANQLLDRFIFEDQIRPQDREELLRALLLKHSHAGELEALGGVKPAVLTR 180 LDLQETSLAGVANQLLDRFIFEDQIRPQDREELLRALLLKHSHAGELEALGGVKPAVLTR Sbjct: 121 LDLQETSLAGVANQLLDRFIFEDQIRPQDREELLRALLLKHSHAGELEALGGVKPAVLTR 180 Query: 181 SGDPSQPLLPQHSSLETQLFCEQGDGGTEGHSPSGILEKIPPDSEATLVLVGRADFLEQP 240 SGDPSQPLLPQHSSLETQLFCEQGDGGTEGHSPSGILEKIPPDSEATLVLVGRADFLEQP Sbjct: 181 SGDPSQPLLPQHSSLETQLFCEQGDGGTEGHSPSGILEKIPPDSEATLVLVGRADFLEQP 240 Query: 241 VLGFVRLQEAAELEAVELPVPIRFLFVLLGPEAPHIDYTQLGRAAATLMSERVFRIDAYM 300 VLGFVRLQEAAELEAVELPVPIRFLFVLLGPEAPHIDYTQLGRAAATLMSERVFRIDAYM Sbjct: 241 VLGFVRLQEAAELEAVELPVPIRFLFVLLGPEAPHIDYTQLGRAAATLMSERVFRIDAYM 300 Query: 301 AQSRGELLHSLEGFLDCSLVLPPTDAPSEQALLSLVPVQRELLRRRYQSSPAKPDSSFYK 360 AQSRGELLHSLEGFLDCSLVLPPTDAPSEQALLSLVPVQRELLRRRYQSSPAKPDSSFYK Sbjct: 301 AQSRGELLHSLEGFLDCSLVLPPTDAPSEQALLSLVPVQRELLRRRYQSSPAKPDSSFYK 360 Query: 361 GLDLNGGPDDPLQQTGQLFGGLVRDIRRRYPYYLSDITDAFSPQVLAAVIFIYFAALSPA 420 GLDLNGGPDDPLQQTGQLFGGLVRDIRRRYPYYLSDITDAFSPQVLAAVIFIYFAALSPA Sbjct: 361 GLDLNGGPDDPLQQTGQLFGGLVRDIRRRYPYYLSDITDAFSPQVLAAVIFIYFAALSPA 420 Query: 421 ITFGGLLGEKTRNQMGVSELLISTAVQGILFALLGAQPLLVVGFSGPLLVFEEAFFSFCE 480 ITFGGLLGEKTRNQMGVSELLISTAVQGILFALLGAQPLLVVGFSGPLLVFEEAFFSFCE Sbjct: 421 ITFGGLLGEKTRNQMGVSELLISTAVQGILFALLGAQPLLVVGFSGPLLVFEEAFFSFCE 480 Query: 481 TNGLEYIVGRVWIGFWLILLVVLVVAFEGSFLVRFISRYTQEIFSFLISLIFIYETFSKL 540 TNGLEYIVGRVWIGFWLILLVVLVVAFEGSFLVRFISRYTQEIFSFLISLIFIYETFSKL Sbjct: 481 TNGLEYIVGRVWIGFWLILLVVLVVAFEGSFLVRFISRYTQEIFSFLISLIFIYETFSKL 540 Query: 541 IKIFQDHPLQKTYNYNVLMVPKPQGPLPNTALLSLVLMAGTFFFAMMLRKFKNSSYFPGK 600 IKIFQDHPLQKTYNYNVLMVPKPQGPLPNTALLSLVLMAGTFFFAMMLRKFKNSSYFPGK Sbjct: 541 IKIFQDHPLQKTYNYNVLMVPKPQGPLPNTALLSLVLMAGTFFFAMMLRKFKNSSYFPGK 600 Query: 601 LRRVIGDFGVPISILIMVLVDFFIQDTYTQKLSVPDGFKVSNSSARGWVIHPLGLRSEFP 660 LRRVIGDFGVPISILIMVLVDFFIQDTYTQKLSVPDGFKVSNSSARGWVIHPLGLRSEFP Sbjct: 601 LRRVIGDFGVPISILIMVLVDFFIQDTYTQKLSVPDGFKVSNSSARGWVIHPLGLRSEFP 660 Query: 661 IWMMFASALPALLVFILIFLESQITTLIVSKPERKMVKGSGFHLDLLLVVGMGGVAALFG 720 IWMMFASALPALLVFILIFLESQITTLIVSKPERKMVKGSGFHLDLLLVVGMGGVAALFG Sbjct: 661 IWMMFASALPALLVFILIFLESQITTLIVSKPERKMVKGSGFHLDLLLVVGMGGVAALFG 720 Query: 721 MPWLSATTVRSVTHANALTVMGKASTPGAAAQIQEVKEQRISGLLVAVLVGLSILMEPIL 780 MPWLSATTVRSVTHANALTVMGKASTPGAAAQIQEVKEQRISGLLVAVLVGLSILMEPIL Sbjct: 721 MPWLSATTVRSVTHANALTVMGKASTPGAAAQIQEVKEQRISGLLVAVLVGLSILMEPIL 780 Query: 781 SRIPLAVLFGIFLYMGVTSLSGIQLFDRILLLFKPPKYHPDVPYVKRVKTWRMHLFTGIQ 840 SRIPLAVLFGIFLYMGVTSLSGIQLFDRILLLFKPPKYHPDVPYVKRVKTWRMHLFTGIQ Sbjct: 781 SRIPLAVLFGIFLYMGVTSLSGIQLFDRILLLFKPPKYHPDVPYVKRVKTWRMHLFTGIQ 840 Query: 841 IICLAVLWVVKSTPASLALPFVLILTVPLRRVLLPLIFRNVELQCLDADDAKATFDEEEG 900 IICLAVLWVVKSTPASLALPFVLILTVPLRRVLLPLIFRNVELQCLDADDAKATFDEEEG Sbjct: 841 IICLAVLWVVKSTPASLALPFVLILTVPLRRVLLPLIFRNVELQCLDADDAKATFDEEEG 900 Query: 901 RDEYDEVAMPV 911 RDEYDEVAMPV Sbjct: 901 RDEYDEVAMPV 911 >1HYN-P nrPDB Length = 379 Score = 772 bits (1994), Expect = 0.0, Method: Compositional matrix adjust. Identities = 379/379 (100%), Positives = 379/379 (100%) Query: 1 MEELQDDYEDMMEENLEQEEYEDPDIPESQMEEPAAHDTEATATDYHTTSHPGTHKVYVE 60 MEELQDDYEDMMEENLEQEEYEDPDIPESQMEEPAAHDTEATATDYHTTSHPGTHKVYVE Sbjct: 1 MEELQDDYEDMMEENLEQEEYEDPDIPESQMEEPAAHDTEATATDYHTTSHPGTHKVYVE 60 Query: 61 LQELVMDEKNQELRWMEAARWVQLEENLGENGAWGRPHLSHLTFWSLLELRRVFTKGTVL 120 LQELVMDEKNQELRWMEAARWVQLEENLGENGAWGRPHLSHLTFWSLLELRRVFTKGTVL Sbjct: 61 LQELVMDEKNQELRWMEAARWVQLEENLGENGAWGRPHLSHLTFWSLLELRRVFTKGTVL 120 Query: 121 LDLQETSLAGVANQLLDRFIFEDQIRPQDREELLRALLLKHSHAGELEALGGVKPAVLTR 180 LDLQETSLAGVANQLLDRFIFEDQIRPQDREELLRALLLKHSHAGELEALGGVKPAVLTR Sbjct: 121 LDLQETSLAGVANQLLDRFIFEDQIRPQDREELLRALLLKHSHAGELEALGGVKPAVLTR 180 Query: 181 SGDPSQPLLPQHSSLETQLFCEQGDGGTEGHSPSGILEKIPPDSEATLVLVGRADFLEQP 240 SGDPSQPLLPQHSSLETQLFCEQGDGGTEGHSPSGILEKIPPDSEATLVLVGRADFLEQP Sbjct: 181 SGDPSQPLLPQHSSLETQLFCEQGDGGTEGHSPSGILEKIPPDSEATLVLVGRADFLEQP 240 Query: 241 VLGFVRLQEAAELEAVELPVPIRFLFVLLGPEAPHIDYTQLGRAAATLMSERVFRIDAYM 300 VLGFVRLQEAAELEAVELPVPIRFLFVLLGPEAPHIDYTQLGRAAATLMSERVFRIDAYM Sbjct: 241 VLGFVRLQEAAELEAVELPVPIRFLFVLLGPEAPHIDYTQLGRAAATLMSERVFRIDAYM 300 Query: 301 AQSRGELLHSLEGFLDCSLVLPPTDAPSEQALLSLVPVQRELLRRRYQSSPAKPDSSFYK 360 AQSRGELLHSLEGFLDCSLVLPPTDAPSEQALLSLVPVQRELLRRRYQSSPAKPDSSFYK Sbjct: 301 AQSRGELLHSLEGFLDCSLVLPPTDAPSEQALLSLVPVQRELLRRRYQSSPAKPDSSFYK 360 Query: 361 GLDLNGGPDDPLQQTGQLF 379 GLDLNGGPDDPLQQTGQLF Sbjct: 361 GLDLNGGPDDPLQQTGQLF 379 >4KY9-A nrPDB Length = 306 Score = 619 bits (1595), Expect = e-177, Method: Compositional matrix adjust. Identities = 306/306 (100%), Positives = 306/306 (100%) Query: 51 HPGTHKVYVELQELVMDEKNQELRWMEAARWVQLEENLGENGAWGRPHLSHLTFWSLLEL 110 HPGTHKVYVELQELVMDEKNQELRWMEAARWVQLEENLGENGAWGRPHLSHLTFWSLLEL Sbjct: 1 HPGTHKVYVELQELVMDEKNQELRWMEAARWVQLEENLGENGAWGRPHLSHLTFWSLLEL 60 Query: 111 RRVFTKGTVLLDLQETSLAGVANQLLDRFIFEDQIRPQDREELLRALLLKHSHAGELEAL 170 RRVFTKGTVLLDLQETSLAGVANQLLDRFIFEDQIRPQDREELLRALLLKHSHAGELEAL Sbjct: 61 RRVFTKGTVLLDLQETSLAGVANQLLDRFIFEDQIRPQDREELLRALLLKHSHAGELEAL 120 Query: 171 GGVKPAVLTRSGDPSQPLLPQHSSLETQLFCEQGDGGTEGHSPSGILEKIPPDSEATLVL 230 GGVKPAVLTRSGDPSQPLLPQHSSLETQLFCEQGDGGTEGHSPSGILEKIPPDSEATLVL Sbjct: 121 GGVKPAVLTRSGDPSQPLLPQHSSLETQLFCEQGDGGTEGHSPSGILEKIPPDSEATLVL 180 Query: 231 VGRADFLEQPVLGFVRLQEAAELEAVELPVPIRFLFVLLGPEAPHIDYTQLGRAAATLMS 290 VGRADFLEQPVLGFVRLQEAAELEAVELPVPIRFLFVLLGPEAPHIDYTQLGRAAATLMS Sbjct: 181 VGRADFLEQPVLGFVRLQEAAELEAVELPVPIRFLFVLLGPEAPHIDYTQLGRAAATLMS 240 Query: 291 ERVFRIDAYMAQSRGELLHSLEGFLDCSLVLPPTDAPSEQALLSLVPVQRELLRRRYQSS 350 ERVFRIDAYMAQSRGELLHSLEGFLDCSLVLPPTDAPSEQALLSLVPVQRELLRRRYQSS Sbjct: 241 ERVFRIDAYMAQSRGELLHSLEGFLDCSLVLPPTDAPSEQALLSLVPVQRELLRRRYQSS 300 Query: 351 PAKPDS 356 PAKPDS Sbjct: 301 PAKPDS 306 >5SV9-A nrPDB Length = 476 Score = 156 bits (395), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 122/494 (24%), Positives = 231/494 (46%), Gaps = 40/494 (8%) Query: 385 DIRRRYPYYLSDITDAFSPQVLAAVIFIYFAALSPAITFGGLLGEKTRNQMGVSELLIST 444 D++ R PYY SD DAF+ +V+ + + YF L PAI F + ++T N GV+E+L+S+ Sbjct: 4 DLKDRIPYYKSDWVDAFNYRVIPSTVDTYFNNLLPAIAFAQDMFDRTDNSYGVNEVLLSS 63 Query: 445 AVQGILFALLGAQPLLVVGFSGPLLVFEEAFFSFCETNGLEYIVGRVWIGFWLILLVVLV 504 A+ GI+F +L QPL +VG +GP+ +F + + Y WI W ++ +L+ Sbjct: 64 AMAGIVFGVLAGQPLCIVGVTGPISIFNYTVYEIIKPLNTSYFGFMFWICLWSMIFHLLL 123 Query: 505 VAFEGSFLVRFISRYTQEIFSFLISLIFIYETFSKLIKIFQDHPLQKTYNYNVLMVPKPQ 564 L+++++ + +IF I++++I + L + F + +K+ V Sbjct: 124 AFTNVVCLLQYVTTFPCDIFGLFINVVYIQKGIQILTRQFHNTSGEKSVQDGFASV---- 179 Query: 565 GPLPNTALLSLVLMAGTFFFAMMLRKFKNSSYFPGKLRRVIGDFGVPISILIMVLVDFF- 623 +++LV+ A F + + F + F K+R I D+ +S+L F Sbjct: 180 -------VVALVMTA----FGLFFKSFHHYPLFTHKIRTFISDYSTALSVLFWSSFTHFG 228 Query: 624 --IQDTYTQKLSVPDGFKVS---NSSARGWVIH-PLGLRSEFPIWMMFASALP-ALLVFI 676 + D +KL + F + N W+ + P+ ++ F ALP +++ I Sbjct: 229 GYLNDVKFKKLPITKSFFPTSKFNRPQNTWLAYEPIPVKDVF-------IALPFGIILTI 281 Query: 677 LIFLESQITTLIVSKPERKMVKGSGFHLDLLLVVGMGGVAALFGMPWLSATTVRSVTHAN 736 L + + +++L+ + + K+ K S FH D L+ ++ + G+P + ++ H Sbjct: 282 LFYFDHNVSSLMAQRHQYKLRKPSSFHYDFALLGLTTCISGVLGIPAPNGLIPQAPLHTE 341 Query: 737 ALTVMGKASTPGAAAQIQEVKEQRISGLLVAVLVGLSILMEPI---LSRIPLAVLFGIFL 793 L V + + EQR++ +++ L + P+ L IP AVL G+F Sbjct: 342 TLLVR------DSNQNVVRCVEQRLTNTFQGLMI-LGTMTRPLLVCLGEIPQAVLSGLFF 394 Query: 794 YMGVTSLSGIQLFDRILLLFKPPKYHPDVPYVKRVKTWRMHLFTGIQIICLAVLWVVKST 853 MG+ L + RI+ LF PK + + ++ M +F + + + +T Sbjct: 395 IMGINGLMTNVIIHRIVFLFSDPKRRDNNSPLAKISKRSMVIFLCFSLAGFTGEFAITNT 454 Query: 854 PASLALPFVLILTV 867 A++ P VL+L+V Sbjct: 455 IAAIGFPLVLLLSV 468 >5JHO-A nrPDB Length = 344 Score = 155 bits (393), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 100/293 (34%), Positives = 158/293 (53%), Gaps = 34/293 (11%) Query: 55 HKVYVELQELVMDEKNQELRWMEAARWVQLEENLGENGA-WGRPHLSHLTFWSLLELRRV 113 H+++ EL E+ M E ++ W E ARW++ EE++ + G W +P+++ L+ SL ELR Sbjct: 61 HELFTELDEICMKE-GEDAEWKETARWLKFEEDVEDGGERWSKPYVATLSLHSLFELRSC 119 Query: 114 FTKGTVLLDLQETSLAGVANQLLDRFIFEDQIRPQDREELLRALLLKHSHAGELE----- 168 GTVLLD+ S+ +++ +LD+ + R ++ ALL KH H E + Sbjct: 120 LINGTVLLDMHANSIEEISDLILDQQELSSDLNDSMRVKVREALLKKHHHQNEKKRNNLI 179 Query: 169 ------ALGGVK---PAVLTRSGDPSQPLLPQHSSLETQ--LFCEQGDGGTEGHSPSGI- 216 A G K P ++ + G P ++LE + + CE HSP + Sbjct: 180 PIVRSFAEVGKKQSDPHLMDKHGQTVSPQSVPTTNLEVKNGVNCE--------HSPVDLS 231 Query: 217 ------LEKIPPDSEATLVLVGRADFLEQPVLGFVRLQEAAELEAV-ELPVPIRFLFVLL 269 ++KIP +EA+ VLVG D L++P++ FVRL A L + E+P+P RFLF+LL Sbjct: 232 KVDLHFMKKIPTGAEASNVLVGEVDILDRPIVAFVRLSPAVLLSGLTEVPIPTRFLFILL 291 Query: 270 GPEAPHIDYTQLGRAAATLMSERVFRIDAYMAQSRGELLHSLEGFLDCSLVLP 322 GP Y ++GR+ AT+M++ +F AY A+ R +LL ++ FLD VLP Sbjct: 292 GPVGKGQQYHEIGRSMATIMTDEIFHDVAYKAKERDDLLAGIDEFLDQVTVLP 344 >5L25-A nrPDB Length = 652 Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 98/385 (25%), Positives = 179/385 (46%), Gaps = 29/385 (7%) Query: 372 LQQTGQLFGGLVRDIRRRYPYYLSDITDAFSP--QVLAAVIFIYFAALSPAITFGGLLGE 429 +++T F G+ D++ R Y D T F ++LA +I+FA+ P I+FG L Sbjct: 1 MEETFVPFEGIKNDLKGRLMCYKQDWTGGFKAGFRILAPTTYIFFASAIPVISFGEQLER 60 Query: 430 KTRNQMGVSELLISTAVQGILFALLGAQPLLVVGFSGPLLVFEEAFFSFCETN---GLE- 485 T + + L STA+ G++ +++G QPLL++G + P ++ F+F + G + Sbjct: 61 STDGVLTAVQTLASTAICGMIHSIIGGQPLLILGVAEPTVIMYTFMFNFAKARPELGRDL 120 Query: 486 YIVGRVWIGFWL-ILLVVLVVAFEGSFLVRFISRYTQEIFSFLISLIFIYETFSKLIKIF 544 ++ W+ W ++L VL + S + RF +R E+F LI+++F+ + L+ F Sbjct: 121 FLAWSGWVCVWTALMLFVLAICGACSIINRF-TRVAGELFGLLIAMLFMQQAIKGLVDEF 179 Query: 545 Q--DHPLQKTYNYNVLMVPKPQGPLPNTALLSLVLMAGTFFFAMMLRKFKNSSYFPGKLR 602 + + QK + P N + +LVL G + RK ++ Y G LR Sbjct: 180 RIPERENQKLKEF------LPSWRFAN-GMFALVLSFGLLLTGLRSRKARSWRYGTGWLR 232 Query: 603 RVIGDFGVPISILIMVLVDFFIQDTYTQKLSVPDGFKVSNSSARGWVIHPLGLRS----- 657 +I D+GVP+ +L+ V +Y VP G S W G + Sbjct: 233 SLIADYGVPLMVLVWTGV------SYIPAGDVPKGIPRRLFSPNPWSPGAYGNWTVVKEM 286 Query: 658 -EFPIWMMFASALPALLVFILIFLESQITTLIVSKPERKMVKGSGFHLDLLLVVGMGGVA 716 + PI + + +PA ++ +L + + + + + + E + K S +H DLLL+ + + Sbjct: 287 LDVPIVYIIGAFIPASMIAVLYYFDHSVASQLAQQKEFNLRKPSSYHYDLLLLGFLTLMC 346 Query: 717 ALFGMPWLSATTVRSVTHANALTVM 741 L G+P + +S H +L + Sbjct: 347 GLLGVPPSNGVIPQSPMHTKSLATL 371 Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 55/148 (37%), Positives = 81/148 (54%), Gaps = 17/148 (11%) Query: 755 EVKEQRISGLLVAVLVGLSILMEPILSRIPLAVLFGIFLYMGVTSLSGIQLFDRILLLFK 814 EVKEQR+S LL + +VG + PIL IP +VL+G F +M + SL G Q ++RILLLF Sbjct: 459 EVKEQRVSNLLQSTMVGGCVAAMPILKMIPTSVLWGYFAFMAIESLPGNQFWERILLLFT 518 Query: 815 PPK--------YHPDVPYVKRVKTWRMHLFTGIQ----IICLAVLWVVKSTPASLALPFV 862 P YH +V+ V + +FT Q +IC + W+ A + P + Sbjct: 519 APSRRFKVLEDYH--ATFVETVPFKTIAMFTLFQTTYLLICFGLTWI---PIAGVMFPLM 573 Query: 863 LILTVPLRRVLLPLIFRNVELQCLDADD 890 ++ +P+R+ LLP F+ LQ LDA + Sbjct: 574 IMFLIPVRQYLLPRFFKGAHLQDLDAAE 601 >6J6Q-S nrPDB Length = 175 Score = 33.1 bits (74), Expect = 0.56, Method: Composition-based stats. Identities = 17/42 (40%), Positives = 24/42 (57%) Query: 162 SHAGELEALGGVKPAVLTRSGDPSQPLLPQHSSLETQLFCEQ 203 SH +LEA G K A T +G LLP H++L+ + F E+ Sbjct: 4 SHRPQLEARSGAKAAAYTPTGIEHARLLPGHTTLKYRKFKEE 45 >3URR-A nrPDB Length = 153 Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust. Identities = 26/83 (31%), Positives = 37/83 (44%), Gaps = 1/83 (1%) Query: 225 EATLVLVGRADFLEQPVLGFVRLQEAAELEAVELPVPIRFLFVLLGPEAPHIDYTQLGRA 284 E + GR L+ P+ FVRL E EA + P+ L LL PE + ++ Sbjct: 63 EGVAIPHGRIKGLKHPLAAFVRLAEPIPFEAPD-GQPVSLLIFLLVPEQATQAHLEILSE 121 Query: 285 AATLMSERVFRIDAYMAQSRGEL 307 A L+S+R R + R EL Sbjct: 122 IAQLLSDRDTRERLHTEPDRDEL 144 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 4YZF-A nrPDB 1438 0.0 1HYN-P nrPDB 674 0.0 5SV9-A nrPDB 625 e-179 4KY9-A nrPDB 524 e-149 5L25-A nrPDB 469 e-132 5JHO-A nrPDB 407 e-113 Sequences not found previously or not previously below threshold: 3URR-A nrPDB 41 0.002 2JH3-A nrPDB 33 0.72 1KXU-A nrPDB 30 4.8 2HPG-A nrPDB 30 5.8 5DA0-A nrPDB 29 9.1 4F35-D nrPDB 29 9.1 CONVERGED! >4YZF-A nrPDB Length = 911 Score = 1438 bits (3722), Expect = 0.0, Method: Composition-based stats. Identities = 911/911 (100%), Positives = 911/911 (100%) Query: 1 MEELQDDYEDMMEENLEQEEYEDPDIPESQMEEPAAHDTEATATDYHTTSHPGTHKVYVE 60 MEELQDDYEDMMEENLEQEEYEDPDIPESQMEEPAAHDTEATATDYHTTSHPGTHKVYVE Sbjct: 1 MEELQDDYEDMMEENLEQEEYEDPDIPESQMEEPAAHDTEATATDYHTTSHPGTHKVYVE 60 Query: 61 LQELVMDEKNQELRWMEAARWVQLEENLGENGAWGRPHLSHLTFWSLLELRRVFTKGTVL 120 LQELVMDEKNQELRWMEAARWVQLEENLGENGAWGRPHLSHLTFWSLLELRRVFTKGTVL Sbjct: 61 LQELVMDEKNQELRWMEAARWVQLEENLGENGAWGRPHLSHLTFWSLLELRRVFTKGTVL 120 Query: 121 LDLQETSLAGVANQLLDRFIFEDQIRPQDREELLRALLLKHSHAGELEALGGVKPAVLTR 180 LDLQETSLAGVANQLLDRFIFEDQIRPQDREELLRALLLKHSHAGELEALGGVKPAVLTR Sbjct: 121 LDLQETSLAGVANQLLDRFIFEDQIRPQDREELLRALLLKHSHAGELEALGGVKPAVLTR 180 Query: 181 SGDPSQPLLPQHSSLETQLFCEQGDGGTEGHSPSGILEKIPPDSEATLVLVGRADFLEQP 240 SGDPSQPLLPQHSSLETQLFCEQGDGGTEGHSPSGILEKIPPDSEATLVLVGRADFLEQP Sbjct: 181 SGDPSQPLLPQHSSLETQLFCEQGDGGTEGHSPSGILEKIPPDSEATLVLVGRADFLEQP 240 Query: 241 VLGFVRLQEAAELEAVELPVPIRFLFVLLGPEAPHIDYTQLGRAAATLMSERVFRIDAYM 300 VLGFVRLQEAAELEAVELPVPIRFLFVLLGPEAPHIDYTQLGRAAATLMSERVFRIDAYM Sbjct: 241 VLGFVRLQEAAELEAVELPVPIRFLFVLLGPEAPHIDYTQLGRAAATLMSERVFRIDAYM 300 Query: 301 AQSRGELLHSLEGFLDCSLVLPPTDAPSEQALLSLVPVQRELLRRRYQSSPAKPDSSFYK 360 AQSRGELLHSLEGFLDCSLVLPPTDAPSEQALLSLVPVQRELLRRRYQSSPAKPDSSFYK Sbjct: 301 AQSRGELLHSLEGFLDCSLVLPPTDAPSEQALLSLVPVQRELLRRRYQSSPAKPDSSFYK 360 Query: 361 GLDLNGGPDDPLQQTGQLFGGLVRDIRRRYPYYLSDITDAFSPQVLAAVIFIYFAALSPA 420 GLDLNGGPDDPLQQTGQLFGGLVRDIRRRYPYYLSDITDAFSPQVLAAVIFIYFAALSPA Sbjct: 361 GLDLNGGPDDPLQQTGQLFGGLVRDIRRRYPYYLSDITDAFSPQVLAAVIFIYFAALSPA 420 Query: 421 ITFGGLLGEKTRNQMGVSELLISTAVQGILFALLGAQPLLVVGFSGPLLVFEEAFFSFCE 480 ITFGGLLGEKTRNQMGVSELLISTAVQGILFALLGAQPLLVVGFSGPLLVFEEAFFSFCE Sbjct: 421 ITFGGLLGEKTRNQMGVSELLISTAVQGILFALLGAQPLLVVGFSGPLLVFEEAFFSFCE 480 Query: 481 TNGLEYIVGRVWIGFWLILLVVLVVAFEGSFLVRFISRYTQEIFSFLISLIFIYETFSKL 540 TNGLEYIVGRVWIGFWLILLVVLVVAFEGSFLVRFISRYTQEIFSFLISLIFIYETFSKL Sbjct: 481 TNGLEYIVGRVWIGFWLILLVVLVVAFEGSFLVRFISRYTQEIFSFLISLIFIYETFSKL 540 Query: 541 IKIFQDHPLQKTYNYNVLMVPKPQGPLPNTALLSLVLMAGTFFFAMMLRKFKNSSYFPGK 600 IKIFQDHPLQKTYNYNVLMVPKPQGPLPNTALLSLVLMAGTFFFAMMLRKFKNSSYFPGK Sbjct: 541 IKIFQDHPLQKTYNYNVLMVPKPQGPLPNTALLSLVLMAGTFFFAMMLRKFKNSSYFPGK 600 Query: 601 LRRVIGDFGVPISILIMVLVDFFIQDTYTQKLSVPDGFKVSNSSARGWVIHPLGLRSEFP 660 LRRVIGDFGVPISILIMVLVDFFIQDTYTQKLSVPDGFKVSNSSARGWVIHPLGLRSEFP Sbjct: 601 LRRVIGDFGVPISILIMVLVDFFIQDTYTQKLSVPDGFKVSNSSARGWVIHPLGLRSEFP 660 Query: 661 IWMMFASALPALLVFILIFLESQITTLIVSKPERKMVKGSGFHLDLLLVVGMGGVAALFG 720 IWMMFASALPALLVFILIFLESQITTLIVSKPERKMVKGSGFHLDLLLVVGMGGVAALFG Sbjct: 661 IWMMFASALPALLVFILIFLESQITTLIVSKPERKMVKGSGFHLDLLLVVGMGGVAALFG 720 Query: 721 MPWLSATTVRSVTHANALTVMGKASTPGAAAQIQEVKEQRISGLLVAVLVGLSILMEPIL 780 MPWLSATTVRSVTHANALTVMGKASTPGAAAQIQEVKEQRISGLLVAVLVGLSILMEPIL Sbjct: 721 MPWLSATTVRSVTHANALTVMGKASTPGAAAQIQEVKEQRISGLLVAVLVGLSILMEPIL 780 Query: 781 SRIPLAVLFGIFLYMGVTSLSGIQLFDRILLLFKPPKYHPDVPYVKRVKTWRMHLFTGIQ 840 SRIPLAVLFGIFLYMGVTSLSGIQLFDRILLLFKPPKYHPDVPYVKRVKTWRMHLFTGIQ Sbjct: 781 SRIPLAVLFGIFLYMGVTSLSGIQLFDRILLLFKPPKYHPDVPYVKRVKTWRMHLFTGIQ 840 Query: 841 IICLAVLWVVKSTPASLALPFVLILTVPLRRVLLPLIFRNVELQCLDADDAKATFDEEEG 900 IICLAVLWVVKSTPASLALPFVLILTVPLRRVLLPLIFRNVELQCLDADDAKATFDEEEG Sbjct: 841 IICLAVLWVVKSTPASLALPFVLILTVPLRRVLLPLIFRNVELQCLDADDAKATFDEEEG 900 Query: 901 RDEYDEVAMPV 911 RDEYDEVAMPV Sbjct: 901 RDEYDEVAMPV 911 >1HYN-P nrPDB Length = 379 Score = 674 bits (1739), Expect = 0.0, Method: Composition-based stats. Identities = 379/379 (100%), Positives = 379/379 (100%) Query: 1 MEELQDDYEDMMEENLEQEEYEDPDIPESQMEEPAAHDTEATATDYHTTSHPGTHKVYVE 60 MEELQDDYEDMMEENLEQEEYEDPDIPESQMEEPAAHDTEATATDYHTTSHPGTHKVYVE Sbjct: 1 MEELQDDYEDMMEENLEQEEYEDPDIPESQMEEPAAHDTEATATDYHTTSHPGTHKVYVE 60 Query: 61 LQELVMDEKNQELRWMEAARWVQLEENLGENGAWGRPHLSHLTFWSLLELRRVFTKGTVL 120 LQELVMDEKNQELRWMEAARWVQLEENLGENGAWGRPHLSHLTFWSLLELRRVFTKGTVL Sbjct: 61 LQELVMDEKNQELRWMEAARWVQLEENLGENGAWGRPHLSHLTFWSLLELRRVFTKGTVL 120 Query: 121 LDLQETSLAGVANQLLDRFIFEDQIRPQDREELLRALLLKHSHAGELEALGGVKPAVLTR 180 LDLQETSLAGVANQLLDRFIFEDQIRPQDREELLRALLLKHSHAGELEALGGVKPAVLTR Sbjct: 121 LDLQETSLAGVANQLLDRFIFEDQIRPQDREELLRALLLKHSHAGELEALGGVKPAVLTR 180 Query: 181 SGDPSQPLLPQHSSLETQLFCEQGDGGTEGHSPSGILEKIPPDSEATLVLVGRADFLEQP 240 SGDPSQPLLPQHSSLETQLFCEQGDGGTEGHSPSGILEKIPPDSEATLVLVGRADFLEQP Sbjct: 181 SGDPSQPLLPQHSSLETQLFCEQGDGGTEGHSPSGILEKIPPDSEATLVLVGRADFLEQP 240 Query: 241 VLGFVRLQEAAELEAVELPVPIRFLFVLLGPEAPHIDYTQLGRAAATLMSERVFRIDAYM 300 VLGFVRLQEAAELEAVELPVPIRFLFVLLGPEAPHIDYTQLGRAAATLMSERVFRIDAYM Sbjct: 241 VLGFVRLQEAAELEAVELPVPIRFLFVLLGPEAPHIDYTQLGRAAATLMSERVFRIDAYM 300 Query: 301 AQSRGELLHSLEGFLDCSLVLPPTDAPSEQALLSLVPVQRELLRRRYQSSPAKPDSSFYK 360 AQSRGELLHSLEGFLDCSLVLPPTDAPSEQALLSLVPVQRELLRRRYQSSPAKPDSSFYK Sbjct: 301 AQSRGELLHSLEGFLDCSLVLPPTDAPSEQALLSLVPVQRELLRRRYQSSPAKPDSSFYK 360 Query: 361 GLDLNGGPDDPLQQTGQLF 379 GLDLNGGPDDPLQQTGQLF Sbjct: 361 GLDLNGGPDDPLQQTGQLF 379 >5SV9-A nrPDB Length = 476 Score = 625 bits (1612), Expect = e-179, Method: Composition-based stats. Identities = 122/494 (24%), Positives = 231/494 (46%), Gaps = 40/494 (8%) Query: 385 DIRRRYPYYLSDITDAFSPQVLAAVIFIYFAALSPAITFGGLLGEKTRNQMGVSELLIST 444 D++ R PYY SD DAF+ +V+ + + YF L PAI F + ++T N GV+E+L+S+ Sbjct: 4 DLKDRIPYYKSDWVDAFNYRVIPSTVDTYFNNLLPAIAFAQDMFDRTDNSYGVNEVLLSS 63 Query: 445 AVQGILFALLGAQPLLVVGFSGPLLVFEEAFFSFCETNGLEYIVGRVWIGFWLILLVVLV 504 A+ GI+F +L QPL +VG +GP+ +F + + Y WI W ++ +L+ Sbjct: 64 AMAGIVFGVLAGQPLCIVGVTGPISIFNYTVYEIIKPLNTSYFGFMFWICLWSMIFHLLL 123 Query: 505 VAFEGSFLVRFISRYTQEIFSFLISLIFIYETFSKLIKIFQDHPLQKTYNYNVLMVPKPQ 564 L+++++ + +IF I++++I + L + F + +K+ V Sbjct: 124 AFTNVVCLLQYVTTFPCDIFGLFINVVYIQKGIQILTRQFHNTSGEKSVQDGFASV---- 179 Query: 565 GPLPNTALLSLVLMAGTFFFAMMLRKFKNSSYFPGKLRRVIGDFGVPISILIMVLVDFF- 623 +++LV+ A F + + F + F K+R I D+ +S+L F Sbjct: 180 -------VVALVMTA----FGLFFKSFHHYPLFTHKIRTFISDYSTALSVLFWSSFTHFG 228 Query: 624 --IQDTYTQKLSVPDGFKVS---NSSARGWVIH-PLGLRSEFPIWMMFASALP-ALLVFI 676 + D +KL + F + N W+ + P+ ++ F ALP +++ I Sbjct: 229 GYLNDVKFKKLPITKSFFPTSKFNRPQNTWLAYEPIPVKDVF-------IALPFGIILTI 281 Query: 677 LIFLESQITTLIVSKPERKMVKGSGFHLDLLLVVGMGGVAALFGMPWLSATTVRSVTHAN 736 L + + +++L+ + + K+ K S FH D L+ ++ + G+P + ++ H Sbjct: 282 LFYFDHNVSSLMAQRHQYKLRKPSSFHYDFALLGLTTCISGVLGIPAPNGLIPQAPLHTE 341 Query: 737 ALTVMGKASTPGAAAQIQEVKEQRISGLLVAVLVGLSILMEPI---LSRIPLAVLFGIFL 793 L V + + EQR++ +++ L + P+ L IP AVL G+F Sbjct: 342 TLLVR------DSNQNVVRCVEQRLTNTFQGLMI-LGTMTRPLLVCLGEIPQAVLSGLFF 394 Query: 794 YMGVTSLSGIQLFDRILLLFKPPKYHPDVPYVKRVKTWRMHLFTGIQIICLAVLWVVKST 853 MG+ L + RI+ LF PK + + ++ M +F + + + +T Sbjct: 395 IMGINGLMTNVIIHRIVFLFSDPKRRDNNSPLAKISKRSMVIFLCFSLAGFTGEFAITNT 454 Query: 854 PASLALPFVLILTV 867 A++ P VL+L+V Sbjct: 455 IAAIGFPLVLLLSV 468 >4KY9-A nrPDB Length = 306 Score = 524 bits (1350), Expect = e-149, Method: Composition-based stats. Identities = 306/306 (100%), Positives = 306/306 (100%) Query: 51 HPGTHKVYVELQELVMDEKNQELRWMEAARWVQLEENLGENGAWGRPHLSHLTFWSLLEL 110 HPGTHKVYVELQELVMDEKNQELRWMEAARWVQLEENLGENGAWGRPHLSHLTFWSLLEL Sbjct: 1 HPGTHKVYVELQELVMDEKNQELRWMEAARWVQLEENLGENGAWGRPHLSHLTFWSLLEL 60 Query: 111 RRVFTKGTVLLDLQETSLAGVANQLLDRFIFEDQIRPQDREELLRALLLKHSHAGELEAL 170 RRVFTKGTVLLDLQETSLAGVANQLLDRFIFEDQIRPQDREELLRALLLKHSHAGELEAL Sbjct: 61 RRVFTKGTVLLDLQETSLAGVANQLLDRFIFEDQIRPQDREELLRALLLKHSHAGELEAL 120 Query: 171 GGVKPAVLTRSGDPSQPLLPQHSSLETQLFCEQGDGGTEGHSPSGILEKIPPDSEATLVL 230 GGVKPAVLTRSGDPSQPLLPQHSSLETQLFCEQGDGGTEGHSPSGILEKIPPDSEATLVL Sbjct: 121 GGVKPAVLTRSGDPSQPLLPQHSSLETQLFCEQGDGGTEGHSPSGILEKIPPDSEATLVL 180 Query: 231 VGRADFLEQPVLGFVRLQEAAELEAVELPVPIRFLFVLLGPEAPHIDYTQLGRAAATLMS 290 VGRADFLEQPVLGFVRLQEAAELEAVELPVPIRFLFVLLGPEAPHIDYTQLGRAAATLMS Sbjct: 181 VGRADFLEQPVLGFVRLQEAAELEAVELPVPIRFLFVLLGPEAPHIDYTQLGRAAATLMS 240 Query: 291 ERVFRIDAYMAQSRGELLHSLEGFLDCSLVLPPTDAPSEQALLSLVPVQRELLRRRYQSS 350 ERVFRIDAYMAQSRGELLHSLEGFLDCSLVLPPTDAPSEQALLSLVPVQRELLRRRYQSS Sbjct: 241 ERVFRIDAYMAQSRGELLHSLEGFLDCSLVLPPTDAPSEQALLSLVPVQRELLRRRYQSS 300 Query: 351 PAKPDS 356 PAKPDS Sbjct: 301 PAKPDS 306 >5L25-A nrPDB Length = 652 Score = 469 bits (1208), Expect = e-132, Method: Composition-based stats. Identities = 98/385 (25%), Positives = 179/385 (46%), Gaps = 29/385 (7%) Query: 372 LQQTGQLFGGLVRDIRRRYPYYLSDITDAFSP--QVLAAVIFIYFAALSPAITFGGLLGE 429 +++T F G+ D++ R Y D T F ++LA +I+FA+ P I+FG L Sbjct: 1 MEETFVPFEGIKNDLKGRLMCYKQDWTGGFKAGFRILAPTTYIFFASAIPVISFGEQLER 60 Query: 430 KTRNQMGVSELLISTAVQGILFALLGAQPLLVVGFSGPLLVFEEAFFSFCETN---GLE- 485 T + + L STA+ G++ +++G QPLL++G + P ++ F+F + G + Sbjct: 61 STDGVLTAVQTLASTAICGMIHSIIGGQPLLILGVAEPTVIMYTFMFNFAKARPELGRDL 120 Query: 486 YIVGRVWIGFWL-ILLVVLVVAFEGSFLVRFISRYTQEIFSFLISLIFIYETFSKLIKIF 544 ++ W+ W ++L VL + S + RF +R E+F LI+++F+ + L+ F Sbjct: 121 FLAWSGWVCVWTALMLFVLAICGACSIINRF-TRVAGELFGLLIAMLFMQQAIKGLVDEF 179 Query: 545 Q--DHPLQKTYNYNVLMVPKPQGPLPNTALLSLVLMAGTFFFAMMLRKFKNSSYFPGKLR 602 + + QK + P N + +LVL G + RK ++ Y G LR Sbjct: 180 RIPERENQKLKEF------LPSWRFAN-GMFALVLSFGLLLTGLRSRKARSWRYGTGWLR 232 Query: 603 RVIGDFGVPISILIMVLVDFFIQDTYTQKLSVPDGFKVSNSSARGWVIHPLGLRS----- 657 +I D+GVP+ +L+ V +Y VP G S W G + Sbjct: 233 SLIADYGVPLMVLVWTGV------SYIPAGDVPKGIPRRLFSPNPWSPGAYGNWTVVKEM 286 Query: 658 -EFPIWMMFASALPALLVFILIFLESQITTLIVSKPERKMVKGSGFHLDLLLVVGMGGVA 716 + PI + + +PA ++ +L + + + + + + E + K S +H DLLL+ + + Sbjct: 287 LDVPIVYIIGAFIPASMIAVLYYFDHSVASQLAQQKEFNLRKPSSYHYDLLLLGFLTLMC 346 Query: 717 ALFGMPWLSATTVRSVTHANALTVM 741 L G+P + +S H +L + Sbjct: 347 GLLGVPPSNGVIPQSPMHTKSLATL 371 Score = 193 bits (491), Expect = 2e-49, Method: Composition-based stats. Identities = 59/186 (31%), Positives = 92/186 (49%), Gaps = 18/186 (9%) Query: 720 GMPWLSATTVRSVTHANALTVMGKASTPGAAAQI-----QEVKEQRISGLLVAVLVGLSI 774 G+ L +T+++ T L + +I EVKEQR+S LL + +VG + Sbjct: 419 GLKELKESTIQATTFTGNLNAPVDETLFDIEKEIDDLLPVEVKEQRVSNLLQSTMVGGCV 478 Query: 775 LMEPILSRIPLAVLFGIFLYMGVTSLSGIQLFDRILLLFKPPKYH------PDVPYVKRV 828 PIL IP +VL+G F +M + SL G Q ++RILLLF P +V+ V Sbjct: 479 AAMPILKMIPTSVLWGYFAFMAIESLPGNQFWERILLLFTAPSRRFKVLEDYHATFVETV 538 Query: 829 KTWRMHLFTGIQ----IICLAVLWVVKSTPASLALPFVLILTVPLRRVLLPLIFRNVELQ 884 + +FT Q +IC + W+ A + P +++ +P+R+ LLP F+ LQ Sbjct: 539 PFKTIAMFTLFQTTYLLICFGLTWI---PIAGVMFPLMIMFLIPVRQYLLPRFFKGAHLQ 595 Query: 885 CLDADD 890 LDA + Sbjct: 596 DLDAAE 601 >5JHO-A nrPDB Length = 344 Score = 407 bits (1045), Expect = e-113, Method: Composition-based stats. Identities = 105/319 (32%), Positives = 166/319 (52%), Gaps = 38/319 (11%) Query: 33 EPAAHDTEATATDYHTTSHPGT----HKVYVELQELVMDEKNQELRWMEAARWVQLEENL 88 E AHDT + + + H+++ EL E+ M E ++ W E ARW++ EE++ Sbjct: 35 EALAHDTPSQRVQFILGTEEDEEHVPHELFTELDEICMKE-GEDAEWKETARWLKFEEDV 93 Query: 89 GENGA-WGRPHLSHLTFWSLLELRRVFTKGTVLLDLQETSLAGVANQLLDRFIFEDQIRP 147 + G W +P+++ L+ SL ELR GTVLLD+ S+ +++ +LD+ + Sbjct: 94 EDGGERWSKPYVATLSLHSLFELRSCLINGTVLLDMHANSIEEISDLILDQQELSSDLND 153 Query: 148 QDREELLRALLLKHSHAGELE-----------ALGGVK---PAVLTRSGDPSQPLLPQHS 193 R ++ ALL KH H E + A G K P ++ + G P + Sbjct: 154 SMRVKVREALLKKHHHQNEKKRNNLIPIVRSFAEVGKKQSDPHLMDKHGQTVSPQSVPTT 213 Query: 194 SLETQ--LFCEQGDGGTEGHSPSGI-------LEKIPPDSEATLVLVGRADFLEQPVLGF 244 +LE + + CE HSP + ++KIP +EA+ VLVG D L++P++ F Sbjct: 214 NLEVKNGVNCE--------HSPVDLSKVDLHFMKKIPTGAEASNVLVGEVDILDRPIVAF 265 Query: 245 VRLQEAAELEAV-ELPVPIRFLFVLLGPEAPHIDYTQLGRAAATLMSERVFRIDAYMAQS 303 VRL A L + E+P+P RFLF+LLGP Y ++GR+ AT+M++ +F AY A+ Sbjct: 266 VRLSPAVLLSGLTEVPIPTRFLFILLGPVGKGQQYHEIGRSMATIMTDEIFHDVAYKAKE 325 Query: 304 RGELLHSLEGFLDCSLVLP 322 R +LL ++ FLD VLP Sbjct: 326 RDDLLAGIDEFLDQVTVLP 344 >3URR-A nrPDB Length = 153 Score = 41.2 bits (95), Expect = 0.002, Method: Composition-based stats. Identities = 25/76 (32%), Positives = 35/76 (46%), Gaps = 1/76 (1%) Query: 232 GRADFLEQPVLGFVRLQEAAELEAVELPVPIRFLFVLLGPEAPHIDYTQLGRAAATLMSE 291 GR L+ P+ FVRL E EA + P+ L LL PE + ++ A L+S+ Sbjct: 70 GRIKGLKHPLAAFVRLAEPIPFEAPD-GQPVSLLIFLLVPEQATQAHLEILSEIAQLLSD 128 Query: 292 RVFRIDAYMAQSRGEL 307 R R + R EL Sbjct: 129 RDTRERLHTEPDRDEL 144 >2JH3-A nrPDB Length = 474 Score = 32.7 bits (73), Expect = 0.72, Method: Composition-based stats. Identities = 22/75 (29%), Positives = 30/75 (40%), Gaps = 3/75 (4%) Query: 51 HPGTHKVYVELQ-ELVMDEKNQELRWMEAARWVQLEENLGENGAWGRPHLSHLTFWSLLE 109 HP +V + L E DE+ ++ A W L G G L+ + L E Sbjct: 250 HPAVAEVVLALAAEGREDERGGDIDQAHAEAWAALRHLAERGGRLGEVLLT--PYGGLFE 307 Query: 110 LRRVFTKGTVLLDLQ 124 LR +G LDLQ Sbjct: 308 LRHTLDEGRATLDLQ 322 >1KXU-A nrPDB Length = 333 Score = 30.0 bits (66), Expect = 4.8, Method: Composition-based stats. Identities = 18/74 (24%), Positives = 34/74 (45%), Gaps = 11/74 (14%) Query: 376 GQLFGGLVRDIRRRYPYYLSDITDAFSPQVLAAVIFIYFAALSPAITFGGLLGEKTRNQM 435 + F G + D++ RYP +P++L + + A+T LL T +Q+ Sbjct: 174 YRPFEGFLIDLKTRYPILE-------NPEILRKTADDFLNRI--ALTDAYLLY--TPSQI 222 Query: 436 GVSELLISTAVQGI 449 ++ +L S + GI Sbjct: 223 ALTAILSSASRAGI 236 >2HPG-A nrPDB Length = 327 Score = 29.6 bits (65), Expect = 5.8, Method: Composition-based stats. Identities = 14/82 (17%), Positives = 28/82 (34%), Gaps = 6/82 (7%) Query: 588 LRKFKNSSYFPGKLRRVIGDFGVPISILIMV-LVDFFIQDTYTQKLSVPDGFKVSNSSAR 646 L+K K S L+ + FG+ + V F+ + +K +G ++ A Sbjct: 108 LKKIKQSPTMQKWLKELEQRFGIKVLSFYWVQGYRHFVTNKPIRKPEDLNGLRIRTPGAP 167 Query: 647 GW-----VIHPLGLRSEFPIWM 663 W + + + F Sbjct: 168 AWQESIRSLGAIPVAVNFGEIY 189 >5DA0-A nrPDB Length = 505 Score = 29.3 bits (64), Expect = 9.1, Method: Composition-based stats. Identities = 69/411 (16%), Positives = 146/411 (35%), Gaps = 86/411 (20%) Query: 393 YLSDITDAFSPQVLAAVIFIYFAALSP-AITFGGLLGEKTRNQMGVSELLISTAVQGILF 451 Y + VLA ++ AL P AI F + G Q+G L ++ + ++ Sbjct: 13 YQREWFANPRKDVLAGIVVAL--ALIPEAIAFSIIAG--VDPQVG----LYASFIIALIT 64 Query: 452 ALLGAQPLLVVGFSGPLLVFEEAFFSFCETNGLEYIVGRVWIGFWLILLVVLVVAFEGSF 511 A LG +P ++ +G + + + +G++Y+ +L VL V F + Sbjct: 65 AFLGGRPGMISAATGAMALL---MTGLVKDHGIQYLFAA------TVLTGVLQVVFGWAK 115 Query: 512 LVRFISRYTQEIFSFLISLIFIYETFSKLIKIFQDHPLQKTYNYNVLMVPKPQGPLPNTA 571 L R++ + + ++ + I + M PQ N Sbjct: 116 LARYLKFVPRSVMVGFVNALAIL----------------------IFMAQLPQFVGANWQ 153 Query: 572 LLSLVLMAGTFFFAMMLRKFKNSSYFPGKLRRVIGDFGVPISILIMVLVDFFIQDTYT-- 629 + ++V AG ++ FK + +++ V+ D T Sbjct: 154 MYAMV-AAGLAIIYLLPLVFKAMP------------SALVAIVVLTVVAVVTGADVKTVG 200 Query: 630 QKLSVPDGFKVSNSSARGWVIHPLGLRSEFPIWMMFASALPALLVFILIFLESQITTLIV 689 ++P L + FP+ AL + ++ LES +T ++ Sbjct: 201 DMGTLPTALPHFQFPQVPLTFETLAI--IFPV---------ALTLSLVGLLESLLTAQLI 249 Query: 690 SKPERKMVKGSGFHLDLLLVVGMGGVAALFGMPWLSATTVRSVTHANALTVMGKASTPGA 749 + + S +++ V FG A +S+ + + G+ ST Sbjct: 250 DE---RTDTTSDKNVESRGQGVANIVTGFFGGMAGCAMIGQSMINVTS-GGRGRLSTF-- 303 Query: 750 AAQIQEVKEQRISGLLVAVLVGLSILMEPILSRIPLAVLFGIFLYMGVTSL 800 ++G + VL+ + ++P+L +IP+A L + + + +++ Sbjct: 304 -----------VAGAFLMVLI---LALQPLLVQIPMAALVAVMMVVAISTF 340 >4F35-D nrPDB Length = 449 Score = 29.3 bits (64), Expect = 9.1, Method: Composition-based stats. Identities = 25/113 (22%), Positives = 45/113 (39%), Gaps = 22/113 (19%) Query: 764 LLVAVLVGLSILMEPILSRIPLAVLFGIFLYMGVTSLSGIQLFDRILLLF------KPPK 817 L A+ V ++ ++ P++ AV FGIF T + + I+ LF Sbjct: 47 LTEALHVTVTAILVPVM-----AVFFGIFE----TQAALNNFANSIIFLFLGGFALAAAM 97 Query: 818 YHPDVPYVKRVK-------TWRMHLFTGIQIICLAVLWVVKSTPASLALPFVL 863 +H + V K + +F + L +W+ + A++ LP VL Sbjct: 98 HHQGLDKVIADKVLAMAQGKMSVAVFMLFGVTALLSMWISNTATAAMMLPLVL 150 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.317 0.135 0.369 Lambda K H 0.267 0.0413 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 34,940,795 Number of Sequences: 36641 Number of extensions: 1420538 Number of successful extensions: 3421 Number of sequences better than 10.0: 21 Number of HSP's better than 10.0 without gapping: 17 Number of HSP's successfully gapped in prelim test: 20 Number of HSP's that attempted gapping in prelim test: 3366 Number of HSP's gapped (non-prelim): 43 length of query: 911 length of database: 10,336,785 effective HSP length: 106 effective length of query: 805 effective length of database: 6,452,839 effective search space: 5194535395 effective search space used: 5194535395 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 64 (29.2 bits)