BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= P02294 (131 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 6GEN-G nrPDB 252 3e-68 4WNN-B nrPDB 202 3e-53 4M6B-A nrPDB 194 1e-50 6A7U-A nrPDB 179 4e-46 5GTC-D nrPDB 177 1e-45 5O9G-H nrPDB 176 3e-45 3W97-D nrPDB 172 3e-44 3X1V-D nrPDB 172 4e-44 5GSU-D nrPDB 171 7e-44 4NFT-A nrPDB 166 3e-42 5CHL-B nrPDB 165 4e-42 5VEY-A nrPDB 164 7e-42 5WCU-D nrPDB 164 8e-42 6DZT-D nrPDB 160 1e-40 4KHA-A nrPDB 159 2e-40 5B1L-D nrPDB 159 3e-40 5Y27-B nrPDB 31 0.18 1BFM-A nrPDB 28 1.0 6EM8-A nrPDB 27 3.7 3MD0-A nrPDB 26 4.4 6EMW-B nrPDB 26 4.6 3QWY-A nrPDB 26 4.9 3PXI-A nrPDB 26 5.2 3NWR-A nrPDB 26 5.2 2MW8-A nrPDB 26 5.4 3MWA-A nrPDB 26 5.6 3J3U-A nrPDB 25 8.1 >6GEN-G nrPDB Length = 131 Score = 252 bits (644), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 127/131 (96%), Positives = 128/131 (97%) Query: 1 MSSAAEKKPASKAPAEKKPAAKKTSTSVDGKKRSKVRKETYSSYIYKVLKQTHPDTGISQ 60 MS+ AEKKPASKAPAEKKPAAKKTSTS DGKKRSK RKETYSSYIYKVLKQTHPDTGISQ Sbjct: 1 MSAKAEKKPASKAPAEKKPAAKKTSTSTDGKKRSKARKETYSSYIYKVLKQTHPDTGISQ 60 Query: 61 KSMSILNSFVNDIFERIATEASKLAAYNKKSTISAREIQTAVRLILPGELAKHAVSEGTR 120 KSMSILNSFVNDIFERIATEASKLAAYNKKSTISAREIQTAVRLILPGELAKHAVSEGTR Sbjct: 61 KSMSILNSFVNDIFERIATEASKLAAYNKKSTISAREIQTAVRLILPGELAKHAVSEGTR 120 Query: 121 AVTKYSSSTQA 131 AVTKYSSSTQA Sbjct: 121 AVTKYSSSTQA 131 >4WNN-B nrPDB Length = 102 Score = 202 bits (514), Expect = 3e-53, Method: Compositional matrix adjust. Identities = 100/101 (99%), Positives = 100/101 (99%) Query: 31 KKRSKVRKETYSSYIYKVLKQTHPDTGISQKSMSILNSFVNDIFERIATEASKLAAYNKK 90 KKRSK RKETYSSYIYKVLKQTHPDTGISQKSMSILNSFVNDIFERIATEASKLAAYNKK Sbjct: 2 KKRSKARKETYSSYIYKVLKQTHPDTGISQKSMSILNSFVNDIFERIATEASKLAAYNKK 61 Query: 91 STISAREIQTAVRLILPGELAKHAVSEGTRAVTKYSSSTQA 131 STISAREIQTAVRLILPGELAKHAVSEGTRAVTKYSSSTQA Sbjct: 62 STISAREIQTAVRLILPGELAKHAVSEGTRAVTKYSSSTQA 102 >4M6B-A nrPDB Length = 193 Score = 194 bits (493), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 95/96 (98%), Positives = 96/96 (100%) Query: 36 VRKETYSSYIYKVLKQTHPDTGISQKSMSILNSFVNDIFERIATEASKLAAYNKKSTISA 95 +RKETYSSYIYKVLKQTHPDTGISQKSMSILNSFVNDIFERIATEASKLAAYNKKSTISA Sbjct: 1 MRKETYSSYIYKVLKQTHPDTGISQKSMSILNSFVNDIFERIATEASKLAAYNKKSTISA 60 Query: 96 REIQTAVRLILPGELAKHAVSEGTRAVTKYSSSTQA 131 REIQTAVRLILPGELAKHAVSEGTRAVTKYSSSTQA Sbjct: 61 REIQTAVRLILPGELAKHAVSEGTRAVTKYSSSTQA 96 >6A7U-A nrPDB Length = 240 Score = 179 bits (453), Expect = 4e-46, Method: Compositional matrix adjust. Identities = 90/124 (72%), Positives = 104/124 (83%), Gaps = 4/124 (3%) Query: 8 KPASKAPAEKKPAAKKTSTSV---DGKKRSKVRKETYSSYIYKVLKQTHPDTGISQKSMS 64 +PA APA KK +KK T DGKKR + RKE+YS Y+YKVLKQ HPDTGIS K+M Sbjct: 3 EPAKSAPAPKK-GSKKAVTKAQKKDGKKRKRSRKESYSIYVYKVLKQVHPDTGISSKAMG 61 Query: 65 ILNSFVNDIFERIATEASKLAAYNKKSTISAREIQTAVRLILPGELAKHAVSEGTRAVTK 124 I+NSFVNDIFERIA EAS+LA YNK+STI++REIQTAVRL+LPGELAKHAVSEGT+AVTK Sbjct: 62 IMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTK 121 Query: 125 YSSS 128 Y+SS Sbjct: 122 YTSS 125 >5GTC-D nrPDB Length = 129 Score = 177 bits (449), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 89/123 (72%), Positives = 103/123 (83%), Gaps = 4/123 (3%) Query: 9 PASKAPAEKKPAAKKTSTSV---DGKKRSKVRKETYSSYIYKVLKQTHPDTGISQKSMSI 65 PA APA KK +KK T DGKKR + RKE+YS Y+YKVLKQ HPDTGIS K+M I Sbjct: 7 PAKSAPAPKK-GSKKAVTKAQKKDGKKRKRSRKESYSIYVYKVLKQVHPDTGISSKAMGI 65 Query: 66 LNSFVNDIFERIATEASKLAAYNKKSTISAREIQTAVRLILPGELAKHAVSEGTRAVTKY 125 +NSFVNDIFERIA EAS+LA YNK+STI++REIQTAVRL+LPGELAKHAVSEGT+AVTKY Sbjct: 66 MNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKY 125 Query: 126 SSS 128 +S+ Sbjct: 126 TSA 128 >5O9G-H nrPDB Length = 122 Score = 176 bits (446), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 86/121 (71%), Positives = 103/121 (85%), Gaps = 2/121 (1%) Query: 10 ASKAPAEKKPAAKKTSTSV--DGKKRSKVRKETYSSYIYKVLKQTHPDTGISQKSMSILN 67 A APA KK + K + + DGKKR K RKE+Y+ Y+YKVLKQ HPDTGIS K+MSI+N Sbjct: 2 AKSAPAPKKGSKKAVTKTQKKDGKKRRKTRKESYAIYVYKVLKQVHPDTGISSKAMSIMN 61 Query: 68 SFVNDIFERIATEASKLAAYNKKSTISAREIQTAVRLILPGELAKHAVSEGTRAVTKYSS 127 SFVND+FERIA EAS+LA YNK+STI++REIQTAVRL+LPGELAKHAVSEGT+AVTKY+S Sbjct: 62 SFVNDVFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTS 121 Query: 128 S 128 + Sbjct: 122 A 122 >3W97-D nrPDB Length = 105 Score = 172 bits (437), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 79/101 (78%), Positives = 93/101 (92%) Query: 28 VDGKKRSKVRKETYSSYIYKVLKQTHPDTGISQKSMSILNSFVNDIFERIATEASKLAAY 87 +DGKKR + RKE+YS Y+YKVLKQ HPDTGIS K+M I+NSFVNDIFERIA EAS+LA Y Sbjct: 4 MDGKKRKRSRKESYSIYVYKVLKQVHPDTGISSKAMGIMNSFVNDIFERIAGEASRLAHY 63 Query: 88 NKKSTISAREIQTAVRLILPGELAKHAVSEGTRAVTKYSSS 128 NK+STI++REIQTAVRL+LPGELAKHAVSEGT+AVTKY+S+ Sbjct: 64 NKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSA 104 >3X1V-D nrPDB Length = 126 Score = 172 bits (436), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 79/100 (79%), Positives = 93/100 (93%) Query: 29 DGKKRSKVRKETYSSYIYKVLKQTHPDTGISQKSMSILNSFVNDIFERIATEASKLAAYN 88 +G+KR + RKE+YS YIYKVLKQ HPDTGIS K+MSI+NSFV DIFERIA+EAS+LA YN Sbjct: 26 EGRKRKRCRKESYSIYIYKVLKQVHPDTGISSKAMSIMNSFVTDIFERIASEASRLAHYN 85 Query: 89 KKSTISAREIQTAVRLILPGELAKHAVSEGTRAVTKYSSS 128 K+STI++REIQTAVRL+LPGELAKHAVSEGT+AVTKY+SS Sbjct: 86 KRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSS 125 >5GSU-D nrPDB Length = 126 Score = 171 bits (434), Expect = 7e-44, Method: Compositional matrix adjust. Identities = 80/100 (80%), Positives = 93/100 (93%) Query: 29 DGKKRSKVRKETYSSYIYKVLKQTHPDTGISQKSMSILNSFVNDIFERIATEASKLAAYN 88 +GKKR + RKE+YS YIYKVLKQ HPDTGIS K+MSI+NSFV DIFERIA+EAS+LA Y+ Sbjct: 26 EGKKRKRTRKESYSIYIYKVLKQVHPDTGISSKAMSIMNSFVTDIFERIASEASRLAHYS 85 Query: 89 KKSTISAREIQTAVRLILPGELAKHAVSEGTRAVTKYSSS 128 K+STIS+REIQTAVRL+LPGELAKHAVSEGT+AVTKY+SS Sbjct: 86 KRSTISSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSS 125 >4NFT-A nrPDB Length = 209 Score = 166 bits (419), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 77/98 (78%), Positives = 90/98 (91%) Query: 34 SKVRKETYSSYIYKVLKQTHPDTGISQKSMSILNSFVNDIFERIATEASKLAAYNKKSTI 93 S +RKE+YS Y+YKVLKQ HPDTGIS K+M I+NSFVNDIFERIA EAS+LA YNK+STI Sbjct: 2 SHMRKESYSIYVYKVLKQVHPDTGISSKAMGIMNSFVNDIFERIAGEASRLAHYNKRSTI 61 Query: 94 SAREIQTAVRLILPGELAKHAVSEGTRAVTKYSSSTQA 131 ++REIQTAVRL+LPGELAKHAVSEGT+AVTKY+SS +A Sbjct: 62 TSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSSKKA 99 >5CHL-B nrPDB Length = 193 Score = 165 bits (418), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 76/95 (80%), Positives = 88/95 (92%) Query: 36 VRKETYSSYIYKVLKQTHPDTGISQKSMSILNSFVNDIFERIATEASKLAAYNKKSTISA 95 +RKE+YS Y+YKVLKQ HPDTGIS K+M I+NSFVNDIFERIA EAS+LA YNK+STI++ Sbjct: 1 MRKESYSIYVYKVLKQVHPDTGISSKAMGIMNSFVNDIFERIAGEASRLAHYNKRSTITS 60 Query: 96 REIQTAVRLILPGELAKHAVSEGTRAVTKYSSSTQ 130 REIQTAVRL+LPGELAKHAVSEGT+AVTKY+SS Q Sbjct: 61 REIQTAVRLLLPGELAKHAVSEGTKAVTKYTSSKQ 95 >5VEY-A nrPDB Length = 194 Score = 164 bits (416), Expect = 7e-42, Method: Compositional matrix adjust. Identities = 76/96 (79%), Positives = 88/96 (91%) Query: 36 VRKETYSSYIYKVLKQTHPDTGISQKSMSILNSFVNDIFERIATEASKLAAYNKKSTISA 95 +RKE+YS Y+YKVLKQ HPDTGIS K+M I+NSFVNDIFERIA EAS+LA YNK+STI++ Sbjct: 8 MRKESYSIYVYKVLKQVHPDTGISSKAMGIMNSFVNDIFERIAGEASRLAHYNKRSTITS 67 Query: 96 REIQTAVRLILPGELAKHAVSEGTRAVTKYSSSTQA 131 REIQTAVRL+LPGELAKHAVSEGT+AVTKY+SS A Sbjct: 68 REIQTAVRLLLPGELAKHAVSEGTKAVTKYTSSASA 103 >5WCU-D nrPDB Length = 94 Score = 164 bits (416), Expect = 8e-42, Method: Compositional matrix adjust. Identities = 76/92 (82%), Positives = 87/92 (94%) Query: 37 RKETYSSYIYKVLKQTHPDTGISQKSMSILNSFVNDIFERIATEASKLAAYNKKSTISAR 96 RKE+Y+ YIYKVLKQ HPDTGIS K+MSI+NSFVNDIFERIA EAS+LA YNK+STI++R Sbjct: 3 RKESYAIYIYKVLKQVHPDTGISSKAMSIMNSFVNDIFERIAAEASRLAHYNKRSTITSR 62 Query: 97 EIQTAVRLILPGELAKHAVSEGTRAVTKYSSS 128 EIQTAVRL+LPGELAKHAVSEGT+AVTKY+SS Sbjct: 63 EIQTAVRLLLPGELAKHAVSEGTKAVTKYTSS 94 >6DZT-D nrPDB Length = 124 Score = 160 bits (405), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 74/90 (82%), Positives = 85/90 (94%) Query: 39 ETYSSYIYKVLKQTHPDTGISQKSMSILNSFVNDIFERIATEASKLAAYNKKSTISAREI 98 E+Y+ YIYKVLKQ HPDTGIS K+MSI+NSFVNDIFERIA EAS+LA YNK+STI++REI Sbjct: 34 ESYAIYIYKVLKQVHPDTGISSKAMSIMNSFVNDIFERIAAEASRLAHYNKRSTITSREI 93 Query: 99 QTAVRLILPGELAKHAVSEGTRAVTKYSSS 128 QTAVRL+LPGELAKHAVSEGT+AVTKY+SS Sbjct: 94 QTAVRLLLPGELAKHAVSEGTKAVTKYTSS 123 >4KHA-A nrPDB Length = 410 Score = 159 bits (403), Expect = 2e-40, Method: Composition-based stats. Identities = 77/98 (78%), Positives = 91/98 (92%) Query: 31 KKRSKVRKETYSSYIYKVLKQTHPDTGISQKSMSILNSFVNDIFERIATEASKLAAYNKK 90 KKR K RKE+Y+ Y+YKVLKQ HPDTGIS K+MSI+NSFVND+FERIA EAS+LA YNK+ Sbjct: 312 KKRRKTRKESYAIYVYKVLKQVHPDTGISSKAMSIMNSFVNDVFERIAGEASRLAHYNKR 371 Query: 91 STISAREIQTAVRLILPGELAKHAVSEGTRAVTKYSSS 128 STI++REIQTAVRL+LPGELAKHAVSEGT+AVTKY+S+ Sbjct: 372 STITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSA 409 >5B1L-D nrPDB Length = 129 Score = 159 bits (403), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 72/90 (80%), Positives = 85/90 (94%) Query: 39 ETYSSYIYKVLKQTHPDTGISQKSMSILNSFVNDIFERIATEASKLAAYNKKSTISAREI 98 E+YS Y+YKVLKQ HPDTGIS K+M I+NSFVNDIFERIA+EAS+LA YNK+STI++RE+ Sbjct: 39 ESYSIYVYKVLKQVHPDTGISSKAMGIMNSFVNDIFERIASEASRLAHYNKRSTITSREV 98 Query: 99 QTAVRLILPGELAKHAVSEGTRAVTKYSSS 128 QTAVRL+LPGELAKHAVSEGT+AVTKY+SS Sbjct: 99 QTAVRLLLPGELAKHAVSEGTKAVTKYTSS 128 >5Y27-B nrPDB Length = 92 Score = 30.8 bits (68), Expect = 0.18, Method: Compositional matrix adjust. Identities = 18/58 (31%), Positives = 33/58 (56%), Gaps = 2/58 (3%) Query: 47 KVLKQTHPDTGISQKSMSILNSFVNDIF-ERIATEASKLAAYNKKSTISAREIQTAVR 103 +++KQ D + ++L S ++F E++ATEA +LA K+ I R+++ VR Sbjct: 22 RIIKQDE-DVHYCSNASALLISVATELFVEKLATEAYQLAKLQKRKGIRYRDVEDVVR 78 >1BFM-A nrPDB Length = 69 Score = 28.1 bits (61), Expect = 1.0, Method: Compositional matrix adjust. Identities = 16/46 (34%), Positives = 26/46 (56%) Query: 58 ISQKSMSILNSFVNDIFERIATEASKLAAYNKKSTISAREIQTAVR 103 +S + L + ++ IA+EA KLA + + TI A +I+ AVR Sbjct: 20 VSDDARITLAKILEEMGRDIASEAIKLARHAGRKTIKAEDIELAVR 65 >6EM8-A nrPDB Length = 818 Score = 26.6 bits (57), Expect = 3.7, Method: Compositional matrix adjust. Identities = 9/27 (33%), Positives = 17/27 (62%) Query: 30 GKKRSKVRKETYSSYIYKVLKQTHPDT 56 G+ KVR++ YS ++ +++ HPD Sbjct: 600 GQLTEKVRRKPYSVILFDEIEKAHPDV 626 >3MD0-A nrPDB Length = 355 Score = 26.2 bits (56), Expect = 4.4, Method: Compositional matrix adjust. Identities = 10/23 (43%), Positives = 18/23 (78%) Query: 87 YNKKSTISAREIQTAVRLILPGE 109 ++K++ ++ARE+ A+RLI P E Sbjct: 231 HHKEARLAARELSAAIRLIYPRE 253 >6EMW-B nrPDB Length = 225 Score = 26.2 bits (56), Expect = 4.6, Method: Compositional matrix adjust. Identities = 9/27 (33%), Positives = 17/27 (62%) Query: 30 GKKRSKVRKETYSSYIYKVLKQTHPDT 56 G+ KVR++ YS ++ +++ HPD Sbjct: 113 GQLTEKVRRKPYSVILFDEIEKAHPDV 139 >3QWY-A nrPDB Length = 308 Score = 26.2 bits (56), Expect = 4.9, Method: Compositional matrix adjust. Identities = 13/32 (40%), Positives = 19/32 (59%) Query: 58 ISQKSMSILNSFVNDIFERIATEASKLAAYNK 89 I+ +S + + +N R+ TEAS LAAY K Sbjct: 113 IANQSFPDIPALLNHFKMRVLTEASLLAAYKK 144 >3PXI-A nrPDB Length = 758 Score = 25.8 bits (55), Expect = 5.2, Method: Compositional matrix adjust. Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 1/35 (2%) Query: 22 KKTSTSVDGKKRSKVRKETYSSYIYKVLKQTHPDT 56 +K STS G+ KVR++ YS + +++ HPD Sbjct: 562 EKHSTS-GGQLTEKVRRKPYSVVLLDAIEKAHPDV 595 >3NWR-A nrPDB Length = 432 Score = 25.8 bits (55), Expect = 5.2, Method: Composition-based stats. Identities = 12/34 (35%), Positives = 19/34 (55%) Query: 74 FERIATEASKLAAYNKKSTISAREIQTAVRLILP 107 F R+A E+ L A ++ S + E++ A R LP Sbjct: 43 FVRVANESDALRARSRASVLRIEELEAAARPSLP 76 >2MW8-A nrPDB Length = 71 Score = 25.8 bits (55), Expect = 5.4, Method: Compositional matrix adjust. Identities = 10/24 (41%), Positives = 17/24 (70%) Query: 50 KQTHPDTGISQKSMSILNSFVNDI 73 ++T P T IS +++ IL SF+ D+ Sbjct: 7 QKTRPRTKISVEALGILQSFIQDV 30 >3MWA-A nrPDB Length = 342 Score = 25.8 bits (55), Expect = 5.6, Method: Compositional matrix adjust. Identities = 15/51 (29%), Positives = 32/51 (62%), Gaps = 5/51 (9%) Query: 37 RKETYSSYIYKVLKQTHPDTGISQKSMSILNSFVNDIFERIATEASKLAAY 87 + + YS+++ ++K T+PD+ I QK++S+ N + +A EA +++Y Sbjct: 201 KNKYYSAFV--LVKTTNPDSAIFQKNLSLDNK---QAYVIMAQEALNMSSY 246 >3J3U-A nrPDB Length = 810 Score = 25.4 bits (54), Expect = 8.1, Method: Compositional matrix adjust. Identities = 9/27 (33%), Positives = 16/27 (59%) Query: 30 GKKRSKVRKETYSSYIYKVLKQTHPDT 56 G+ KVR++ YS + +++ HPD Sbjct: 600 GQLTEKVRRKPYSVVLLDAIEKAHPDV 626 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 4KHA-A nrPDB 200 2e-52 6A7U-A nrPDB 186 3e-48 4NFT-A nrPDB 169 2e-43 5CHL-B nrPDB 169 2e-43 5VEY-A nrPDB 168 5e-43 5GTC-D nrPDB 163 2e-41 3W97-D nrPDB 163 2e-41 5O9G-H nrPDB 156 3e-39 4M6B-A nrPDB 154 7e-39 6GEN-G nrPDB 152 4e-38 5B1L-D nrPDB 152 5e-38 3X1V-D nrPDB 149 2e-37 5WCU-D nrPDB 149 4e-37 6DZT-D nrPDB 148 9e-37 5GSU-D nrPDB 139 3e-34 4WNN-B nrPDB 138 6e-34 Sequences not found previously or not previously below threshold: 3IBX-A nrPDB 31 0.12 1BFM-A nrPDB 28 1.4 4X0Q-A nrPDB 27 1.7 1JFI-B nrPDB 27 1.9 1B67-A nrPDB 26 3.4 6D9J-M nrPDB 26 6.3 5LZW-M nrPDB 26 6.3 3X1T-C nrPDB 25 8.7 3J7P-M nrPDB 25 8.8 4OLS-A nrPDB 25 9.2 CONVERGED! >4KHA-A nrPDB Length = 410 Score = 200 bits (507), Expect = 2e-52, Method: Composition-based stats. Identities = 77/99 (77%), Positives = 91/99 (91%) Query: 31 KKRSKVRKETYSSYIYKVLKQTHPDTGISQKSMSILNSFVNDIFERIATEASKLAAYNKK 90 KKR K RKE+Y+ Y+YKVLKQ HPDTGIS K+MSI+NSFVND+FERIA EAS+LA YNK+ Sbjct: 312 KKRRKTRKESYAIYVYKVLKQVHPDTGISSKAMSIMNSFVNDVFERIAGEASRLAHYNKR 371 Query: 91 STISAREIQTAVRLILPGELAKHAVSEGTRAVTKYSSST 129 STI++REIQTAVRL+LPGELAKHAVSEGT+AVTKY+S+ Sbjct: 372 STITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSAK 410 >6A7U-A nrPDB Length = 240 Score = 186 bits (471), Expect = 3e-48, Method: Composition-based stats. Identities = 88/124 (70%), Positives = 104/124 (83%), Gaps = 2/124 (1%) Query: 8 KPASKAPAEKKPAAKKTSTSV--DGKKRSKVRKETYSSYIYKVLKQTHPDTGISQKSMSI 65 +PA APA KK + K + + DGKKR + RKE+YS Y+YKVLKQ HPDTGIS K+M I Sbjct: 3 EPAKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSIYVYKVLKQVHPDTGISSKAMGI 62 Query: 66 LNSFVNDIFERIATEASKLAAYNKKSTISAREIQTAVRLILPGELAKHAVSEGTRAVTKY 125 +NSFVNDIFERIA EAS+LA YNK+STI++REIQTAVRL+LPGELAKHAVSEGT+AVTKY Sbjct: 63 MNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKY 122 Query: 126 SSST 129 +SS Sbjct: 123 TSSK 126 >4NFT-A nrPDB Length = 209 Score = 169 bits (429), Expect = 2e-43, Method: Composition-based stats. Identities = 77/98 (78%), Positives = 90/98 (91%) Query: 34 SKVRKETYSSYIYKVLKQTHPDTGISQKSMSILNSFVNDIFERIATEASKLAAYNKKSTI 93 S +RKE+YS Y+YKVLKQ HPDTGIS K+M I+NSFVNDIFERIA EAS+LA YNK+STI Sbjct: 2 SHMRKESYSIYVYKVLKQVHPDTGISSKAMGIMNSFVNDIFERIAGEASRLAHYNKRSTI 61 Query: 94 SAREIQTAVRLILPGELAKHAVSEGTRAVTKYSSSTQA 131 ++REIQTAVRL+LPGELAKHAVSEGT+AVTKY+SS +A Sbjct: 62 TSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSSKKA 99 >5CHL-B nrPDB Length = 193 Score = 169 bits (429), Expect = 2e-43, Method: Composition-based stats. Identities = 76/95 (80%), Positives = 88/95 (92%) Query: 36 VRKETYSSYIYKVLKQTHPDTGISQKSMSILNSFVNDIFERIATEASKLAAYNKKSTISA 95 +RKE+YS Y+YKVLKQ HPDTGIS K+M I+NSFVNDIFERIA EAS+LA YNK+STI++ Sbjct: 1 MRKESYSIYVYKVLKQVHPDTGISSKAMGIMNSFVNDIFERIAGEASRLAHYNKRSTITS 60 Query: 96 REIQTAVRLILPGELAKHAVSEGTRAVTKYSSSTQ 130 REIQTAVRL+LPGELAKHAVSEGT+AVTKY+SS Q Sbjct: 61 REIQTAVRLLLPGELAKHAVSEGTKAVTKYTSSKQ 95 >5VEY-A nrPDB Length = 194 Score = 168 bits (426), Expect = 5e-43, Method: Composition-based stats. Identities = 76/96 (79%), Positives = 88/96 (91%) Query: 36 VRKETYSSYIYKVLKQTHPDTGISQKSMSILNSFVNDIFERIATEASKLAAYNKKSTISA 95 +RKE+YS Y+YKVLKQ HPDTGIS K+M I+NSFVNDIFERIA EAS+LA YNK+STI++ Sbjct: 8 MRKESYSIYVYKVLKQVHPDTGISSKAMGIMNSFVNDIFERIAGEASRLAHYNKRSTITS 67 Query: 96 REIQTAVRLILPGELAKHAVSEGTRAVTKYSSSTQA 131 REIQTAVRL+LPGELAKHAVSEGT+AVTKY+SS A Sbjct: 68 REIQTAVRLLLPGELAKHAVSEGTKAVTKYTSSASA 103 Score = 25.5 bits (54), Expect = 6.1, Method: Composition-based stats. Identities = 22/97 (22%), Positives = 42/97 (43%), Gaps = 1/97 (1%) Query: 8 KPASKAPAEKKPAAKKTSTSVDGKKRSKVRKETYSS-YIYKVLKQTHPDTGISQKSMSIL 66 + A A +E A K ++S K RS + ++++L++ + + + L Sbjct: 81 ELAKHAVSEGTKAVTKYTSSASAKTRSSRAGLQFPVGRVHRLLRKGNYSERVGAGAPVYL 140 Query: 67 NSFVNDIFERIATEASKLAAYNKKSTISAREIQTAVR 103 + + + I A A NKK+ I R +Q A+R Sbjct: 141 AAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIR 177 >5GTC-D nrPDB Length = 129 Score = 163 bits (413), Expect = 2e-41, Method: Composition-based stats. Identities = 87/124 (70%), Positives = 104/124 (83%), Gaps = 2/124 (1%) Query: 8 KPASKAPAEKKPAAKKTSTSV--DGKKRSKVRKETYSSYIYKVLKQTHPDTGISQKSMSI 65 +PA APA KK + K + + DGKKR + RKE+YS Y+YKVLKQ HPDTGIS K+M I Sbjct: 6 EPAKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSIYVYKVLKQVHPDTGISSKAMGI 65 Query: 66 LNSFVNDIFERIATEASKLAAYNKKSTISAREIQTAVRLILPGELAKHAVSEGTRAVTKY 125 +NSFVNDIFERIA EAS+LA YNK+STI++REIQTAVRL+LPGELAKHAVSEGT+AVTKY Sbjct: 66 MNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKY 125 Query: 126 SSST 129 +S+ Sbjct: 126 TSAK 129 >3W97-D nrPDB Length = 105 Score = 163 bits (413), Expect = 2e-41, Method: Composition-based stats. Identities = 79/104 (75%), Positives = 94/104 (90%) Query: 26 TSVDGKKRSKVRKETYSSYIYKVLKQTHPDTGISQKSMSILNSFVNDIFERIATEASKLA 85 + +DGKKR + RKE+YS Y+YKVLKQ HPDTGIS K+M I+NSFVNDIFERIA EAS+LA Sbjct: 2 SHMDGKKRKRSRKESYSIYVYKVLKQVHPDTGISSKAMGIMNSFVNDIFERIAGEASRLA 61 Query: 86 AYNKKSTISAREIQTAVRLILPGELAKHAVSEGTRAVTKYSSST 129 YNK+STI++REIQTAVRL+LPGELAKHAVSEGT+AVTKY+S+ Sbjct: 62 HYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSAK 105 >5O9G-H nrPDB Length = 122 Score = 156 bits (393), Expect = 3e-39, Method: Composition-based stats. Identities = 86/121 (71%), Positives = 103/121 (85%), Gaps = 2/121 (1%) Query: 10 ASKAPAEKKPAAKKTSTSV--DGKKRSKVRKETYSSYIYKVLKQTHPDTGISQKSMSILN 67 A APA KK + K + + DGKKR K RKE+Y+ Y+YKVLKQ HPDTGIS K+MSI+N Sbjct: 2 AKSAPAPKKGSKKAVTKTQKKDGKKRRKTRKESYAIYVYKVLKQVHPDTGISSKAMSIMN 61 Query: 68 SFVNDIFERIATEASKLAAYNKKSTISAREIQTAVRLILPGELAKHAVSEGTRAVTKYSS 127 SFVND+FERIA EAS+LA YNK+STI++REIQTAVRL+LPGELAKHAVSEGT+AVTKY+S Sbjct: 62 SFVNDVFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTS 121 Query: 128 S 128 + Sbjct: 122 A 122 >4M6B-A nrPDB Length = 193 Score = 154 bits (390), Expect = 7e-39, Method: Composition-based stats. Identities = 95/96 (98%), Positives = 96/96 (100%) Query: 36 VRKETYSSYIYKVLKQTHPDTGISQKSMSILNSFVNDIFERIATEASKLAAYNKKSTISA 95 +RKETYSSYIYKVLKQTHPDTGISQKSMSILNSFVNDIFERIATEASKLAAYNKKSTISA Sbjct: 1 MRKETYSSYIYKVLKQTHPDTGISQKSMSILNSFVNDIFERIATEASKLAAYNKKSTISA 60 Query: 96 REIQTAVRLILPGELAKHAVSEGTRAVTKYSSSTQA 131 REIQTAVRLILPGELAKHAVSEGTRAVTKYSSSTQA Sbjct: 61 REIQTAVRLILPGELAKHAVSEGTRAVTKYSSSTQA 96 >6GEN-G nrPDB Length = 131 Score = 152 bits (384), Expect = 4e-38, Method: Composition-based stats. Identities = 127/131 (96%), Positives = 128/131 (97%) Query: 1 MSSAAEKKPASKAPAEKKPAAKKTSTSVDGKKRSKVRKETYSSYIYKVLKQTHPDTGISQ 60 MS+ AEKKPASKAPAEKKPAAKKTSTS DGKKRSK RKETYSSYIYKVLKQTHPDTGISQ Sbjct: 1 MSAKAEKKPASKAPAEKKPAAKKTSTSTDGKKRSKARKETYSSYIYKVLKQTHPDTGISQ 60 Query: 61 KSMSILNSFVNDIFERIATEASKLAAYNKKSTISAREIQTAVRLILPGELAKHAVSEGTR 120 KSMSILNSFVNDIFERIATEASKLAAYNKKSTISAREIQTAVRLILPGELAKHAVSEGTR Sbjct: 61 KSMSILNSFVNDIFERIATEASKLAAYNKKSTISAREIQTAVRLILPGELAKHAVSEGTR 120 Query: 121 AVTKYSSSTQA 131 AVTKYSSSTQA Sbjct: 121 AVTKYSSSTQA 131 >5B1L-D nrPDB Length = 129 Score = 152 bits (383), Expect = 5e-38, Method: Composition-based stats. Identities = 79/124 (63%), Positives = 99/124 (79%), Gaps = 2/124 (1%) Query: 8 KPASKAPAEKKPAAKKTSTSVDGKKRSKVRK--ETYSSYIYKVLKQTHPDTGISQKSMSI 65 +P+ PA KK + K + + + + R E+YS Y+YKVLKQ HPDTGIS K+M I Sbjct: 6 EPSRSTPAPKKGSKKAITKAQKKDGKKRKRGRKESYSIYVYKVLKQVHPDTGISSKAMGI 65 Query: 66 LNSFVNDIFERIATEASKLAAYNKKSTISAREIQTAVRLILPGELAKHAVSEGTRAVTKY 125 +NSFVNDIFERIA+EAS+LA YNK+STI++RE+QTAVRL+LPGELAKHAVSEGT+AVTKY Sbjct: 66 MNSFVNDIFERIASEASRLAHYNKRSTITSREVQTAVRLLLPGELAKHAVSEGTKAVTKY 125 Query: 126 SSST 129 +SS Sbjct: 126 TSSK 129 >3X1V-D nrPDB Length = 126 Score = 149 bits (377), Expect = 2e-37, Method: Composition-based stats. Identities = 83/121 (68%), Positives = 99/121 (81%), Gaps = 2/121 (1%) Query: 11 SKAPAEKKPAAKKTSTSV--DGKKRSKVRKETYSSYIYKVLKQTHPDTGISQKSMSILNS 68 A KK K + + +G+KR + RKE+YS YIYKVLKQ HPDTGIS K+MSI+NS Sbjct: 6 KGATISKKGFKKAVTKTQKKEGRKRKRCRKESYSIYIYKVLKQVHPDTGISSKAMSIMNS 65 Query: 69 FVNDIFERIATEASKLAAYNKKSTISAREIQTAVRLILPGELAKHAVSEGTRAVTKYSSS 128 FV DIFERIA+EAS+LA YNK+STI++REIQTAVRL+LPGELAKHAVSEGT+AVTKY+SS Sbjct: 66 FVTDIFERIASEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSS 125 Query: 129 T 129 Sbjct: 126 K 126 >5WCU-D nrPDB Length = 94 Score = 149 bits (375), Expect = 4e-37, Method: Composition-based stats. Identities = 76/94 (80%), Positives = 88/94 (93%) Query: 35 KVRKETYSSYIYKVLKQTHPDTGISQKSMSILNSFVNDIFERIATEASKLAAYNKKSTIS 94 + RKE+Y+ YIYKVLKQ HPDTGIS K+MSI+NSFVNDIFERIA EAS+LA YNK+STI+ Sbjct: 1 RKRKESYAIYIYKVLKQVHPDTGISSKAMSIMNSFVNDIFERIAAEASRLAHYNKRSTIT 60 Query: 95 AREIQTAVRLILPGELAKHAVSEGTRAVTKYSSS 128 +REIQTAVRL+LPGELAKHAVSEGT+AVTKY+SS Sbjct: 61 SREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSS 94 >6DZT-D nrPDB Length = 124 Score = 148 bits (372), Expect = 9e-37, Method: Composition-based stats. Identities = 74/91 (81%), Positives = 85/91 (93%) Query: 39 ETYSSYIYKVLKQTHPDTGISQKSMSILNSFVNDIFERIATEASKLAAYNKKSTISAREI 98 E+Y+ YIYKVLKQ HPDTGIS K+MSI+NSFVNDIFERIA EAS+LA YNK+STI++REI Sbjct: 34 ESYAIYIYKVLKQVHPDTGISSKAMSIMNSFVNDIFERIAAEASRLAHYNKRSTITSREI 93 Query: 99 QTAVRLILPGELAKHAVSEGTRAVTKYSSST 129 QTAVRL+LPGELAKHAVSEGT+AVTKY+SS Sbjct: 94 QTAVRLLLPGELAKHAVSEGTKAVTKYTSSK 124 >5GSU-D nrPDB Length = 126 Score = 139 bits (350), Expect = 3e-34, Method: Composition-based stats. Identities = 84/122 (68%), Positives = 99/122 (81%), Gaps = 2/122 (1%) Query: 10 ASKAPAEKKPAAKKTSTSV--DGKKRSKVRKETYSSYIYKVLKQTHPDTGISQKSMSILN 67 + A KK K + +GKKR + RKE+YS YIYKVLKQ HPDTGIS K+MSI+N Sbjct: 5 SKGATISKKGFKKAVVKTQKKEGKKRKRTRKESYSIYIYKVLKQVHPDTGISSKAMSIMN 64 Query: 68 SFVNDIFERIATEASKLAAYNKKSTISAREIQTAVRLILPGELAKHAVSEGTRAVTKYSS 127 SFV DIFERIA+EAS+LA Y+K+STIS+REIQTAVRL+LPGELAKHAVSEGT+AVTKY+S Sbjct: 65 SFVTDIFERIASEASRLAHYSKRSTISSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTS 124 Query: 128 ST 129 S Sbjct: 125 SK 126 >4WNN-B nrPDB Length = 102 Score = 138 bits (348), Expect = 6e-34, Method: Composition-based stats. Identities = 100/101 (99%), Positives = 100/101 (99%) Query: 31 KKRSKVRKETYSSYIYKVLKQTHPDTGISQKSMSILNSFVNDIFERIATEASKLAAYNKK 90 KKRSK RKETYSSYIYKVLKQTHPDTGISQKSMSILNSFVNDIFERIATEASKLAAYNKK Sbjct: 2 KKRSKARKETYSSYIYKVLKQTHPDTGISQKSMSILNSFVNDIFERIATEASKLAAYNKK 61 Query: 91 STISAREIQTAVRLILPGELAKHAVSEGTRAVTKYSSSTQA 131 STISAREIQTAVRLILPGELAKHAVSEGTRAVTKYSSSTQA Sbjct: 62 STISAREIQTAVRLILPGELAKHAVSEGTRAVTKYSSSTQA 102 >3IBX-A nrPDB Length = 221 Score = 31.3 bits (69), Expect = 0.12, Method: Composition-based stats. Identities = 13/65 (20%), Positives = 30/65 (46%) Query: 64 SILNSFVNDIFERIATEASKLAAYNKKSTISAREIQTAVRLILPGELAKHAVSEGTRAVT 123 +++ F N I + + E S Y ++ I+ +E+Q A + + ++EG + Sbjct: 70 AVMREFSNAIQDILNNEMSIHNHYIRELQITQKELQNACPTLANKSYTSYMLAEGFKGSI 129 Query: 124 KYSSS 128 K ++ Sbjct: 130 KEVAA 134 >1BFM-A nrPDB Length = 69 Score = 27.8 bits (60), Expect = 1.4, Method: Composition-based stats. Identities = 16/46 (34%), Positives = 26/46 (56%) Query: 58 ISQKSMSILNSFVNDIFERIATEASKLAAYNKKSTISAREIQTAVR 103 +S + L + ++ IA+EA KLA + + TI A +I+ AVR Sbjct: 20 VSDDARITLAKILEEMGRDIASEAIKLARHAGRKTIKAEDIELAVR 65 >4X0Q-A nrPDB Length = 772 Score = 27.5 bits (59), Expect = 1.7, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 27/63 (42%), Gaps = 5/63 (7%) Query: 17 KKPAAKKTSTSV-----DGKKRSKVRKETYSSYIYKVLKQTHPDTGISQKSMSILNSFVN 71 K +KKT S +G+K R+ + S + LK HP G+ + I N+ Sbjct: 332 KNQGSKKTLGSTRRGIDNGRKLRLGRQFSTSKDVLNKLKALHPLPGLILEWRRITNAITK 391 Query: 72 DIF 74 +F Sbjct: 392 VVF 394 >1JFI-B nrPDB Length = 179 Score = 27.5 bits (59), Expect = 1.9, Method: Composition-based stats. Identities = 13/61 (21%), Positives = 34/61 (55%) Query: 45 IYKVLKQTHPDTGISQKSMSILNSFVNDIFERIATEASKLAAYNKKSTISAREIQTAVRL 104 I K++K+T P+ ++ + ++ + + I++EA+++ ++K TIS + A+ Sbjct: 21 INKMIKETLPNVRVANDARELVVNCCTEFIHLISSEANEICNKSEKKTISPEHVIQALES 80 Query: 105 I 105 + Sbjct: 81 L 81 >1B67-A nrPDB Length = 68 Score = 26.3 bits (56), Expect = 3.4, Method: Composition-based stats. Identities = 15/48 (31%), Positives = 27/48 (56%) Query: 58 ISQKSMSILNSFVNDIFERIATEASKLAAYNKKSTISAREIQTAVRLI 105 +S + L + ++ E IA+EA KLA + + TI A +I+ A ++ Sbjct: 20 VSDDARIALAKVLEEMGEEIASEAVKLAKHAGRKTIKAEDIELARKMF 67 >6D9J-M nrPDB Length = 198 Score = 25.5 bits (54), Expect = 6.3, Method: Composition-based stats. Identities = 9/22 (40%), Positives = 11/22 (50%) Query: 2 SSAAEKKPASKAPAEKKPAAKK 23 + +K PA KAPA K K Sbjct: 177 AQKGQKPPAQKAPAPKASGKKA 198 >5LZW-M nrPDB Length = 218 Score = 25.5 bits (54), Expect = 6.3, Method: Composition-based stats. Identities = 9/22 (40%), Positives = 11/22 (50%) Query: 2 SSAAEKKPASKAPAEKKPAAKK 23 + +K PA KAPA K K Sbjct: 197 AQKGQKPPAQKAPAPKASGKKA 218 >3X1T-C nrPDB Length = 128 Score = 25.2 bits (53), Expect = 8.7, Method: Composition-based stats. Identities = 20/85 (23%), Positives = 39/85 (45%), Gaps = 7/85 (8%) Query: 26 TSVDGKKRSKVRKETYSS-------YIYKVLKQTHPDTGISQKSMSILNSFVNDIFERIA 78 T GK R+KV+ + + ++++L+Q + I + L + + + + Sbjct: 4 TKRGGKARAKVKSRSSRAGLQFPVGRVHRLLRQGNYAQRIGAGAPVYLAAVLEYLTAEVL 63 Query: 79 TEASKLAAYNKKSTISAREIQTAVR 103 A A NKK+ I+ R +Q A+R Sbjct: 64 ELAGNAARDNKKTRITPRHLQLAIR 88 >3J7P-M nrPDB Length = 213 Score = 25.2 bits (53), Expect = 8.8, Method: Composition-based stats. Identities = 9/22 (40%), Positives = 11/22 (50%) Query: 2 SSAAEKKPASKAPAEKKPAAKK 23 + +K PA KAPA K K Sbjct: 192 AQKVQKPPAQKAPAPKASGEKA 213 >4OLS-A nrPDB Length = 242 Score = 25.2 bits (53), Expect = 9.2, Method: Composition-based stats. Identities = 26/81 (32%), Positives = 31/81 (38%), Gaps = 11/81 (13%) Query: 7 KKPASKAPAEKKPAAKKTSTSVDGKKRSKVRKETYSSYIYKVLKQTHPDTGISQKSMSIL 66 KK ASK PA KK A K S + K K+ I H D G S Sbjct: 14 KKSASKTPAPKKKATLKVSKNHINYTMDKRGKKPEGMVI-------HNDAGRSS-GQQYE 65 Query: 67 NSFVNDIFERIATEASKLAAY 87 NS N + R A+ +A Y Sbjct: 66 NSLANAGYARY---ANGIAHY 83 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.303 0.123 0.316 Lambda K H 0.267 0.0364 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 3,578,769 Number of Sequences: 36641 Number of extensions: 100979 Number of successful extensions: 378 Number of sequences better than 10.0: 36 Number of HSP's better than 10.0 without gapping: 68 Number of HSP's successfully gapped in prelim test: 18 Number of HSP's that attempted gapping in prelim test: 273 Number of HSP's gapped (non-prelim): 110 length of query: 131 length of database: 10,336,785 effective HSP length: 86 effective length of query: 45 effective length of database: 7,185,659 effective search space: 323354655 effective search space used: 323354655 T: 11 A: 40 X1: 16 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 43 (21.8 bits) S2: 53 (25.2 bits)