BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= P01574 (187 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 1AU1-A nrPDB 344 1e-95 3WCY-I nrPDB 130 4e-31 1B5L-A nrPDB 103 4e-23 2LMS-A nrPDB 101 2e-22 3SE4-B nrPDB 100 3e-22 3UX9-A nrPDB 94 4e-20 3OQ3-A nrPDB 89 9e-19 3PIW-A nrPDB 54 5e-08 4IYL-A nrPDB 30 0.79 3PIV-A nrPDB 29 1.1 1KKT-A nrPDB 28 2.0 4XHH-A nrPDB 28 2.3 3UG7-A nrPDB 27 4.1 3ZHP-A nrPDB 27 5.7 >1AU1-A nrPDB Length = 166 Score = 344 bits (882), Expect = 1e-95, Method: Compositional matrix adjust. Identities = 166/166 (100%), Positives = 166/166 (100%) Query: 22 MSYNLLGFLQRSSNFQCQKLLWQLNGRLEYCLKDRMNFDIPEEIKQLQQFQKEDAALTIY 81 MSYNLLGFLQRSSNFQCQKLLWQLNGRLEYCLKDRMNFDIPEEIKQLQQFQKEDAALTIY Sbjct: 1 MSYNLLGFLQRSSNFQCQKLLWQLNGRLEYCLKDRMNFDIPEEIKQLQQFQKEDAALTIY 60 Query: 82 EMLQNIFAIFRQDSSSTGWNETIVENLLANVYHQINHLKTVLEEKLEKEDFTRGKLMSSL 141 EMLQNIFAIFRQDSSSTGWNETIVENLLANVYHQINHLKTVLEEKLEKEDFTRGKLMSSL Sbjct: 61 EMLQNIFAIFRQDSSSTGWNETIVENLLANVYHQINHLKTVLEEKLEKEDFTRGKLMSSL 120 Query: 142 HLKRYYGRILHYLKAKEYSHCAWTIVRVEILRNFYFINRLTGYLRN 187 HLKRYYGRILHYLKAKEYSHCAWTIVRVEILRNFYFINRLTGYLRN Sbjct: 121 HLKRYYGRILHYLKAKEYSHCAWTIVRVEILRNFYFINRLTGYLRN 166 >3WCY-I nrPDB Length = 161 Score = 130 bits (326), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 78/166 (46%), Positives = 103/166 (62%), Gaps = 5/166 (3%) Query: 22 MSYNLLGFLQRSSNFQCQKLLWQLNGRLEYCLKDRMNFDIPEEIKQLQQFQKEDAALTIY 81 ++Y L +R++ +CQ+LL QLNG++ L R +F IP E+ + + QK A I Sbjct: 1 INYKQLQLQERTNIRKCQELLEQLNGKIN--LTYRADFKIPMEMTE--KMQKSYTAFAIQ 56 Query: 82 EMLQNIFAIFRQDSSSTGWNETIVENLLANVYHQINHLKTVLEEKLEKEDFTRGKLMSSL 141 EMLQN+F +FR + SSTGWNETIV LL ++ Q LKTVLEEK E E T ++L Sbjct: 57 EMLQNVFLVFRNNFSSTGWNETIVVRLLDELHQQTVFLKTVLEEKQE-ERLTWEMSSTAL 115 Query: 142 HLKRYYGRILHYLKAKEYSHCAWTIVRVEILRNFYFINRLTGYLRN 187 HLK YY R+ YLK +Y+ AW +VR EI RNF I RLT +N Sbjct: 116 HLKSYYWRVQRYLKLMKYNSYAWMVVRAEIFRNFLIIRRLTRNFQN 161 >1B5L-A nrPDB Length = 172 Score = 103 bits (257), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 48/122 (39%), Positives = 75/122 (61%) Query: 52 CLKDRMNFDIPEEIKQLQQFQKEDAALTIYEMLQNIFAIFRQDSSSTGWNETIVENLLAN 111 CL+DR +F +P+E+ + Q QK+ A +YEMLQ F +F + SS W+ T++E L Sbjct: 29 CLQDRKDFGLPQEMVEGDQLQKDQAFPVLYEMLQQSFNLFYTEHSSAAWDTTLLEQLCTG 88 Query: 112 VYHQINHLKTVLEEKLEKEDFTRGKLMSSLHLKRYYGRILHYLKAKEYSHCAWTIVRVEI 171 + Q++HL T + + +ED G + + +K+Y+ I YL+ K YS CAW IVRVE+ Sbjct: 89 LQQQLDHLDTCRGQVMGEEDSELGNMDPIVTVKKYFQGIYDYLQEKGYSDCAWEIVRVEM 148 Query: 172 LR 173 +R Sbjct: 149 MR 150 >2LMS-A nrPDB Length = 166 Score = 101 bits (251), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 56/143 (39%), Positives = 80/143 (55%), Gaps = 15/143 (10%) Query: 52 CLKDRMNFDIPEEIKQLQQFQKEDAALTIYEMLQNIFAIFRQDSSSTGWNETIVENLLAN 111 CLKDR +F P+E + QFQK + ++EM+Q IF +F SS W+ET+++ Sbjct: 30 CLKDRHDFGFPQE-EFGNQFQKAETIPVLHEMIQQIFNLFSTKDSSAAWDETLLDKFYTE 88 Query: 112 VYHQINHLKT-------VLEEKLEKEDFTRGKLMSSLHLKRYYGRILHYLKAKEYSHCAW 164 +Y Q+N L+ V E L KED S L +++Y+ RI YLK K+YS CAW Sbjct: 89 LYQQLNDLEACVIQGVGVTETPLMKED-------SILAVRKYFQRITLYLKEKKYSPCAW 141 Query: 165 TIVRVEILRNFYFINRLTGYLRN 187 +VR EI+R+F L LR+ Sbjct: 142 EVVRAEIMRSFSLSTNLQESLRS 164 >3SE4-B nrPDB Length = 177 Score = 100 bits (250), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 48/136 (35%), Positives = 80/136 (58%) Query: 52 CLKDRMNFDIPEEIKQLQQFQKEDAALTIYEMLQNIFAIFRQDSSSTGWNETIVENLLAN 111 CLKDR +F P+E+ + Q QK ++EMLQ IF++F + SS W T+++ L Sbjct: 34 CLKDRRDFRFPQEMVKGSQLQKAHVMSVLHEMLQQIFSLFHTERSSAAWQMTLLDQLHTG 93 Query: 112 VYHQINHLKTVLEEKLEKEDFTRGKLMSSLHLKRYYGRILHYLKAKEYSHCAWTIVRVEI 171 ++ Q+ HL+T L + + + + +L L+RY+ I YLK K+YS CAW +VR+EI Sbjct: 94 LHQQLQHLETCLLQVVGEGESAGAISSPALTLRRYFQGIRVYLKEKKYSDCAWEVVRMEI 153 Query: 172 LRNFYFINRLTGYLRN 187 +++ + + LR+ Sbjct: 154 MKSLFLSTNMQERLRS 169 >3UX9-A nrPDB Length = 169 Score = 93.6 bits (231), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 49/138 (35%), Positives = 76/138 (55%), Gaps = 6/138 (4%) Query: 52 CLKDRMNFDIPEEIKQLQQFQKEDAALTIYEMLQNIFAIFRQDSSSTGWNETIVENLLAN 111 CL DR +F P+E QFQK A ++E++Q IF +F SS W+E +++ Sbjct: 32 CLMDRHDFGFPQEEFDGNQFQKAPAISVLHELIQQIFNLFTTKDSSAAWDEDLLDKFCTE 91 Query: 112 VYHQINHLKTVLEEKLEKEDFTRGKLMSS---LHLKRYYGRILHYLKAKEYSHCAWTIVR 168 +Y Q+N L+ + +++E LM++ L +K+Y+ RI YL K+YS CAW +VR Sbjct: 92 LYQQLNDLEACV---MQEERVGETPLMNADSILAVKKYFRRITLYLTEKKYSPCAWEVVR 148 Query: 169 VEILRNFYFINRLTGYLR 186 EI+R+ L LR Sbjct: 149 AEIMRSLSLSTNLQERLR 166 >3OQ3-A nrPDB Length = 166 Score = 89.4 bits (220), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 42/122 (34%), Positives = 70/122 (57%) Query: 52 CLKDRMNFDIPEEIKQLQQFQKEDAALTIYEMLQNIFAIFRQDSSSTGWNETIVENLLAN 111 CLKDR +F P+E QQ Q+ A + E+ Q + IF SS WN T++++ Sbjct: 29 CLKDRKDFGFPQEKVGAQQIQEAQAIPVLSELTQQVLNIFTSKDSSAAWNATLLDSFCNE 88 Query: 112 VYHQINHLKTVLEEKLEKEDFTRGKLMSSLHLKRYYGRILHYLKAKEYSHCAWTIVRVEI 171 V+ Q+N LK + +++ ++ + S L +++Y+ RI YL+ K++S CAW +VR E+ Sbjct: 89 VHQQLNDLKACVMQQVGVQESPLTQEDSLLAVRKYFHRITVYLREKKHSPCAWEVVRAEV 148 Query: 172 LR 173 R Sbjct: 149 WR 150 >3PIW-A nrPDB Length = 161 Score = 53.5 bits (127), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 34/124 (27%), Positives = 59/124 (47%), Gaps = 7/124 (5%) Query: 52 CLKDRMNFDIPE-EIKQLQQFQKEDAALTIYEMLQNIFAIFRQDSSSTGWNETIVENLLA 110 CLK+ + P+ ++ QK A +Y+++ +I +F DS WN+ V+N Sbjct: 31 CLKENVRITFPKYALQSNNSNQKTGVAKAVYKIMDHIDVLFANDSYPEAWNKRKVDNFQN 90 Query: 111 NVYHQINHLKTVLEEKLEK--EDFTRGKLMSSLHLKRYYGRILHYLKAKEYSHCAWTIVR 168 VY K ++ + + +DF LK Y+ ++ L+ K+ S CAW +VR Sbjct: 91 IVYRLTKENKCIMRMRAQGTVDDFP----ARDDALKSYFNKLATLLRNKDNSFCAWEVVR 146 Query: 169 VEIL 172 E+L Sbjct: 147 HELL 150 >4IYL-A nrPDB Length = 93 Score = 29.6 bits (65), Expect = 0.79, Method: Compositional matrix adjust. Identities = 26/76 (34%), Positives = 34/76 (44%), Gaps = 14/76 (18%) Query: 87 IFAIFRQDSSSTGWNETIVENLLANVYHQINHLKTVLEEKLEKEDFTRGKLMSSLHLKRY 146 I A F + TG E V L A + HLK + K+DF+ S L L + Sbjct: 14 IVAKFAKKPGDTGSTEVQVALLTARIAELTEHLK------IYKKDFS-----SRLGLLKL 62 Query: 147 YG---RILHYLKAKEY 159 G R+L YLK K+Y Sbjct: 63 VGQRKRLLSYLKRKDY 78 >3PIV-A nrPDB Length = 164 Score = 29.3 bits (64), Expect = 1.1, Method: Compositional matrix adjust. Identities = 21/77 (27%), Positives = 40/77 (51%), Gaps = 4/77 (5%) Query: 92 RQDSSSTGWNETIVENLLANVYHQINHLKTVLEEKLEKEDFTRGKLMSSLHLKRYYGRIL 151 R+ +S W++ VE+ L N+ H+ + + L+E + + K + +KR++ + Sbjct: 69 REHMNSVNWDQNTVEDFL-NILHRKS---SDLKECVARYAKPAHKESYEIRIKRHFRTLK 124 Query: 152 HYLKAKEYSHCAWTIVR 168 LK K+YS AW +R Sbjct: 125 KILKKKQYSAEAWEQIR 141 >1KKT-A nrPDB Length = 511 Score = 28.5 bits (62), Expect = 2.0, Method: Compositional matrix adjust. Identities = 11/40 (27%), Positives = 23/40 (57%), Gaps = 6/40 (15%) Query: 144 KRYYGRILHYLKAKEYSHCAWTIVRVEILRNFYFINRLTG 183 K +Y + Y+ + Y ++R E++ +FY+ +R+TG Sbjct: 389 KEFYEKAGFYISSGSY------VLRPEVIESFYYAHRVTG 422 >4XHH-A nrPDB Length = 403 Score = 28.1 bits (61), Expect = 2.3, Method: Compositional matrix adjust. Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 3/55 (5%) Query: 32 RSSNFQCQKLLW--QLNGRLEYCLKDRMNFDIPEEIKQLQQFQKEDAALTIYEML 84 ++ +F KLL + YC D ++ PEEIKQ Q Q +AA ++ L Sbjct: 338 KNDSFNKVKLLAMKKFASHFHYCKNDDKHYPTPEEIKQ-QTVQNNNAAASLPPEL 391 >3UG7-A nrPDB Length = 349 Score = 27.3 bits (59), Expect = 4.1, Method: Compositional matrix adjust. Identities = 11/27 (40%), Positives = 19/27 (70%) Query: 108 LLANVYHQINHLKTVLEEKLEKEDFTR 134 +L+ + IN L+ + E+KLEK+D T+ Sbjct: 1 MLSKIKDSINSLRGITEKKLEKKDGTK 27 >3ZHP-A nrPDB Length = 340 Score = 26.9 bits (58), Expect = 5.7, Method: Compositional matrix adjust. Identities = 30/114 (26%), Positives = 50/114 (43%), Gaps = 14/114 (12%) Query: 30 LQRSSNFQCQKLLWQLNGRLEYCLKDRMNFDI-------PEEIKQLQQFQKEDAALTIYE 82 L +S N+ ++ +L G L + DR NF I PE +K + ++ + +E Sbjct: 219 LLQSENYVTKRQSLKLLGEL---ILDRHNFAIMTKYISKPENLKLMMNLLRDKSPNIQFE 275 Query: 83 MLQNIFAIFRQDSSSTGWNETIVENLLANVYHQINHLKTVLEEKLEKEDFTRGK 136 F +F+ +S + IVE LL N I L + +E+ + E F K Sbjct: 276 A----FHVFKVFVASPHKTQPIVEILLKNQPKLIEFLSSFQKERTDDEQFADEK 325 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 1AU1-A nrPDB 221 2e-58 3SE4-B nrPDB 186 4e-48 3UX9-A nrPDB 186 5e-48 2LMS-A nrPDB 185 9e-48 1B5L-A nrPDB 180 4e-46 3WCY-I nrPDB 179 7e-46 3OQ3-A nrPDB 174 2e-44 3PIW-A nrPDB 142 8e-35 Sequences not found previously or not previously below threshold: 3PIV-A nrPDB 48 2e-06 4IM7-A nrPDB 31 0.38 6G1K-A nrPDB 29 0.95 2X0S-A nrPDB 29 1.2 1ZRR-A nrPDB 27 6.9 5MDN-A nrPDB 26 7.8 5LJ5-S nrPDB 26 7.8 1L1L-A nrPDB 26 9.2 >1AU1-A nrPDB Length = 166 Score = 221 bits (563), Expect = 2e-58, Method: Composition-based stats. Identities = 166/166 (100%), Positives = 166/166 (100%) Query: 22 MSYNLLGFLQRSSNFQCQKLLWQLNGRLEYCLKDRMNFDIPEEIKQLQQFQKEDAALTIY 81 MSYNLLGFLQRSSNFQCQKLLWQLNGRLEYCLKDRMNFDIPEEIKQLQQFQKEDAALTIY Sbjct: 1 MSYNLLGFLQRSSNFQCQKLLWQLNGRLEYCLKDRMNFDIPEEIKQLQQFQKEDAALTIY 60 Query: 82 EMLQNIFAIFRQDSSSTGWNETIVENLLANVYHQINHLKTVLEEKLEKEDFTRGKLMSSL 141 EMLQNIFAIFRQDSSSTGWNETIVENLLANVYHQINHLKTVLEEKLEKEDFTRGKLMSSL Sbjct: 61 EMLQNIFAIFRQDSSSTGWNETIVENLLANVYHQINHLKTVLEEKLEKEDFTRGKLMSSL 120 Query: 142 HLKRYYGRILHYLKAKEYSHCAWTIVRVEILRNFYFINRLTGYLRN 187 HLKRYYGRILHYLKAKEYSHCAWTIVRVEILRNFYFINRLTGYLRN Sbjct: 121 HLKRYYGRILHYLKAKEYSHCAWTIVRVEILRNFYFINRLTGYLRN 166 >3SE4-B nrPDB Length = 177 Score = 186 bits (473), Expect = 4e-48, Method: Composition-based stats. Identities = 48/136 (35%), Positives = 80/136 (58%) Query: 52 CLKDRMNFDIPEEIKQLQQFQKEDAALTIYEMLQNIFAIFRQDSSSTGWNETIVENLLAN 111 CLKDR +F P+E+ + Q QK ++EMLQ IF++F + SS W T+++ L Sbjct: 34 CLKDRRDFRFPQEMVKGSQLQKAHVMSVLHEMLQQIFSLFHTERSSAAWQMTLLDQLHTG 93 Query: 112 VYHQINHLKTVLEEKLEKEDFTRGKLMSSLHLKRYYGRILHYLKAKEYSHCAWTIVRVEI 171 ++ Q+ HL+T L + + + + +L L+RY+ I YLK K+YS CAW +VR+EI Sbjct: 94 LHQQLQHLETCLLQVVGEGESAGAISSPALTLRRYFQGIRVYLKEKKYSDCAWEVVRMEI 153 Query: 172 LRNFYFINRLTGYLRN 187 +++ + + LR+ Sbjct: 154 MKSLFLSTNMQERLRS 169 >3UX9-A nrPDB Length = 169 Score = 186 bits (472), Expect = 5e-48, Method: Composition-based stats. Identities = 51/154 (33%), Positives = 79/154 (51%), Gaps = 1/154 (0%) Query: 34 SNFQCQKLLWQLNG-RLEYCLKDRMNFDIPEEIKQLQQFQKEDAALTIYEMLQNIFAIFR 92 N + LL Q++ CL DR +F P+E QFQK A ++E++Q IF +F Sbjct: 13 DNRRTLMLLAQMSRISPSSCLMDRHDFGFPQEEFDGNQFQKAPAISVLHELIQQIFNLFT 72 Query: 93 QDSSSTGWNETIVENLLANVYHQINHLKTVLEEKLEKEDFTRGKLMSSLHLKRYYGRILH 152 SS W+E +++ +Y Q+N L+ + ++ + S L +K+Y+ RI Sbjct: 73 TKDSSAAWDEDLLDKFCTELYQQLNDLEACVMQEERVGETPLMNADSILAVKKYFRRITL 132 Query: 153 YLKAKEYSHCAWTIVRVEILRNFYFINRLTGYLR 186 YL K+YS CAW +VR EI+R+ L LR Sbjct: 133 YLTEKKYSPCAWEVVRAEIMRSLSLSTNLQERLR 166 >2LMS-A nrPDB Length = 166 Score = 185 bits (470), Expect = 9e-48, Method: Composition-based stats. Identities = 51/136 (37%), Positives = 79/136 (58%), Gaps = 1/136 (0%) Query: 52 CLKDRMNFDIPEEIKQLQQFQKEDAALTIYEMLQNIFAIFRQDSSSTGWNETIVENLLAN 111 CLKDR +F P+E + QFQK + ++EM+Q IF +F SS W+ET+++ Sbjct: 30 CLKDRHDFGFPQE-EFGNQFQKAETIPVLHEMIQQIFNLFSTKDSSAAWDETLLDKFYTE 88 Query: 112 VYHQINHLKTVLEEKLEKEDFTRGKLMSSLHLKRYYGRILHYLKAKEYSHCAWTIVRVEI 171 +Y Q+N L+ + + + + K S L +++Y+ RI YLK K+YS CAW +VR EI Sbjct: 89 LYQQLNDLEACVIQGVGVTETPLMKEDSILAVRKYFQRITLYLKEKKYSPCAWEVVRAEI 148 Query: 172 LRNFYFINRLTGYLRN 187 +R+F L LR+ Sbjct: 149 MRSFSLSTNLQESLRS 164 >1B5L-A nrPDB Length = 172 Score = 180 bits (456), Expect = 4e-46, Method: Composition-based stats. Identities = 54/151 (35%), Positives = 84/151 (55%), Gaps = 1/151 (0%) Query: 36 FQCQKLLWQLNG-RLEYCLKDRMNFDIPEEIKQLQQFQKEDAALTIYEMLQNIFAIFRQD 94 + KLL ++N CL+DR +F +P+E+ + Q QK+ A +YEMLQ F +F + Sbjct: 12 RENLKLLDRMNRLSPHSCLQDRKDFGLPQEMVEGDQLQKDQAFPVLYEMLQQSFNLFYTE 71 Query: 95 SSSTGWNETIVENLLANVYHQINHLKTVLEEKLEKEDFTRGKLMSSLHLKRYYGRILHYL 154 SS W+ T++E L + Q++HL T + + +ED G + + +K+Y+ I YL Sbjct: 72 HSSAAWDTTLLEQLCTGLQQQLDHLDTCRGQVMGEEDSELGNMDPIVTVKKYFQGIYDYL 131 Query: 155 KAKEYSHCAWTIVRVEILRNFYFINRLTGYL 185 + K YS CAW IVRVE++R L L Sbjct: 132 QEKGYSDCAWEIVRVEMMRALTVSTTLQKRL 162 >3WCY-I nrPDB Length = 161 Score = 179 bits (454), Expect = 7e-46, Method: Composition-based stats. Identities = 77/166 (46%), Positives = 104/166 (62%), Gaps = 5/166 (3%) Query: 22 MSYNLLGFLQRSSNFQCQKLLWQLNGRLEYCLKDRMNFDIPEEIKQLQQFQKEDAALTIY 81 ++Y L +R++ +CQ+LL QLNG++ L R +F IP E+ + + QK A I Sbjct: 1 INYKQLQLQERTNIRKCQELLEQLNGKIN--LTYRADFKIPMEMTE--KMQKSYTAFAIQ 56 Query: 82 EMLQNIFAIFRQDSSSTGWNETIVENLLANVYHQINHLKTVLEEKLEKEDFTRGKLMSSL 141 EMLQN+F +FR + SSTGWNETIV LL ++ Q LKTVLEEK ++E T ++L Sbjct: 57 EMLQNVFLVFRNNFSSTGWNETIVVRLLDELHQQTVFLKTVLEEK-QEERLTWEMSSTAL 115 Query: 142 HLKRYYGRILHYLKAKEYSHCAWTIVRVEILRNFYFINRLTGYLRN 187 HLK YY R+ YLK +Y+ AW +VR EI RNF I RLT +N Sbjct: 116 HLKSYYWRVQRYLKLMKYNSYAWMVVRAEIFRNFLIIRRLTRNFQN 161 >3OQ3-A nrPDB Length = 166 Score = 174 bits (441), Expect = 2e-44, Method: Composition-based stats. Identities = 44/134 (32%), Positives = 72/134 (53%) Query: 52 CLKDRMNFDIPEEIKQLQQFQKEDAALTIYEMLQNIFAIFRQDSSSTGWNETIVENLLAN 111 CLKDR +F P+E QQ Q+ A + E+ Q + IF SS WN T++++ Sbjct: 29 CLKDRKDFGFPQEKVGAQQIQEAQAIPVLSELTQQVLNIFTSKDSSAAWNATLLDSFCNE 88 Query: 112 VYHQINHLKTVLEEKLEKEDFTRGKLMSSLHLKRYYGRILHYLKAKEYSHCAWTIVRVEI 171 V+ Q+N LK + +++ ++ + S L +++Y+ RI YL+ K++S CAW +VR E+ Sbjct: 89 VHQQLNDLKACVMQQVGVQESPLTQEDSLLAVRKYFHRITVYLREKKHSPCAWEVVRAEV 148 Query: 172 LRNFYFINRLTGYL 185 R L L Sbjct: 149 WRALSSSVNLLARL 162 >3PIW-A nrPDB Length = 161 Score = 142 bits (358), Expect = 8e-35, Method: Composition-based stats. Identities = 38/148 (25%), Positives = 66/148 (44%), Gaps = 8/148 (5%) Query: 29 FLQRSSNFQCQKLLWQLNGRL-EYCLKDRMNFDIPE-EIKQLQQFQKEDAALTIYEMLQN 86 ++R LL + G CLK+ + P+ ++ QK A +Y+++ + Sbjct: 7 IMRRKHVKTAYSLLESMGGIFPRECLKENVRITFPKYALQSNNSNQKTGVAKAVYKIMDH 66 Query: 87 IFAIFRQDSSSTGWNETIVENLLANVYHQINHLKTVLEEKLEK--EDFTRGKLMSSLHLK 144 I +F DS WN+ V+N VY K ++ + + +DF LK Sbjct: 67 IDVLFANDSYPEAWNKRKVDNFQNIVYRLTKENKCIMRMRAQGTVDDFP----ARDDALK 122 Query: 145 RYYGRILHYLKAKEYSHCAWTIVRVEIL 172 Y+ ++ L+ K+ S CAW +VR E+L Sbjct: 123 SYFNKLATLLRNKDNSFCAWEVVRHELL 150 >3PIV-A nrPDB Length = 164 Score = 48.2 bits (113), Expect = 2e-06, Method: Composition-based stats. Identities = 21/87 (24%), Positives = 41/87 (47%), Gaps = 6/87 (6%) Query: 84 LQNIFAIF--RQDSSSTGWNETIVENLLANVYHQINHLKTVLEEKLEKEDFTRGKLMSSL 141 L +I + R+ +S W++ VE+ L ++ + + LK + + K + Sbjct: 59 LDHIIHLMDAREHMNSVNWDQNTVEDFLNILHRKSSDLKECVARYAK----PAHKESYEI 114 Query: 142 HLKRYYGRILHYLKAKEYSHCAWTIVR 168 +KR++ + LK K+YS AW +R Sbjct: 115 RIKRHFRTLKKILKKKQYSAEAWEQIR 141 >4IM7-A nrPDB Length = 506 Score = 30.8 bits (68), Expect = 0.38, Method: Composition-based stats. Identities = 14/66 (21%), Positives = 29/66 (43%), Gaps = 4/66 (6%) Query: 84 LQNIFAIFR-QDSSSTGWNETIVENLLANVYHQINHLKTVLEEKLEKEDFTRGKLMSSLH 142 LQ ++ + S+ W +V + ++ QI+ L+TVL E + + ++ Sbjct: 89 LQQQDNLYTVAEMSADAWTARVVGVVKKALHVQIDGLETVLAAMCEPQ---IAIVSLTIT 145 Query: 143 LKRYYG 148 K Y+ Sbjct: 146 EKGYFH 151 >6G1K-A nrPDB Length = 921 Score = 29.3 bits (64), Expect = 0.95, Method: Composition-based stats. Identities = 22/102 (21%), Positives = 39/102 (38%), Gaps = 8/102 (7%) Query: 50 EYCLKDRMNFDIPEEIKQLQQFQKEDAALTIYEMLQNIFAIFRQDSSSTGWNETIVENLL 109 E LKD+ D P++ F K+ IY + + +S + + L Sbjct: 825 EPILKDKARSDFPKDFTDFGLFPKKQNPNKIYSLAEE-----ATESDPDILDWGKEDKPL 879 Query: 110 AN-VYHQINHLKTVLE--EKLEKEDFTRGKLMSSLHLKRYYG 148 A V +N K ++E E++ +E S HL+ + Sbjct: 880 AGKVEQDVNESKCLMEEDERVLEEQEMEHIASSHEHLEVLFQ 921 >2X0S-A nrPDB Length = 913 Score = 28.9 bits (63), Expect = 1.2, Method: Composition-based stats. Identities = 9/67 (13%), Positives = 25/67 (37%), Gaps = 2/67 (2%) Query: 73 KEDAALTIYEMLQNIFAIFRQDSSSTGWNET--IVENLLANVYHQINHLKTVLEEKLEKE 130 + AA ++ M+ + + + W +E + + Y + + + ++ +E Sbjct: 97 RSGAAASMPGMMDTVLNLGLNKVTVDAWVRRAPRLERFVYDSYRRFITMYADIVMQVGRE 156 Query: 131 DFTRGKL 137 DF Sbjct: 157 DFEEALS 163 >1ZRR-A nrPDB Length = 179 Score = 26.6 bits (57), Expect = 6.9, Method: Composition-based stats. Identities = 15/81 (18%), Positives = 29/81 (35%), Gaps = 8/81 (9%) Query: 88 FAIFRQDS-SSTGWNETIVENLLANVYHQINHLKTVLEEKLEKEDFTRGKLMSSLHLKRY 146 IF ++ W+ T E + Q+N K V E+ + + + + Y Sbjct: 3 LTIFSVKDPQNSLWHSTNAE----EIQQQLN-AKGVRFERWQADRDLGAAPTAETVIAAY 57 Query: 147 YGRILHYLKAKEYSHCAWTIV 167 I + K Y +W ++ Sbjct: 58 QHAIDKLVAEKGYQ--SWDVI 76 >5MDN-A nrPDB Length = 783 Score = 26.2 bits (56), Expect = 7.8, Method: Composition-based stats. Identities = 10/25 (40%), Positives = 12/25 (48%), Gaps = 3/25 (12%) Query: 145 RYYGRILHYLKAKEYSHCAWTIVRV 169 RYY R Y+ K CAW +V Sbjct: 114 RYYMR---YMIDKGVVPCAWNVVEA 135 >5LJ5-S nrPDB Length = 687 Score = 26.2 bits (56), Expect = 7.8, Method: Composition-based stats. Identities = 9/66 (13%), Positives = 23/66 (34%) Query: 93 QDSSSTGWNETIVENLLANVYHQINHLKTVLEEKLEKEDFTRGKLMSSLHLKRYYGRILH 152 S W E + Q+ L + E ++++ + L ++ + + Sbjct: 541 NQYSPQSWIEFAMYQTSTPTEQQLLDLAKLQSENVDEDIEFEITDENKLEARKVFEEAIV 600 Query: 153 YLKAKE 158 + K K+ Sbjct: 601 FFKEKD 606 >1L1L-A nrPDB Length = 739 Score = 26.2 bits (56), Expect = 9.2, Method: Composition-based stats. Identities = 12/54 (22%), Positives = 18/54 (33%) Query: 130 EDFTRGKLMSSLHLKRYYGRILHYLKAKEYSHCAWTIVRVEILRNFYFINRLTG 183 E F L+ + Y K +S W I R I +N ++G Sbjct: 423 EVFPLIAEEQGWDLQEVFALAARYAKRVTFSPYDWEISREIIQKNRRIGISMSG 476 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.316 0.130 0.348 Lambda K H 0.267 0.0398 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 6,318,439 Number of Sequences: 36641 Number of extensions: 213873 Number of successful extensions: 855 Number of sequences better than 10.0: 22 Number of HSP's better than 10.0 without gapping: 22 Number of HSP's successfully gapped in prelim test: 21 Number of HSP's that attempted gapping in prelim test: 819 Number of HSP's gapped (non-prelim): 44 length of query: 187 length of database: 10,336,785 effective HSP length: 91 effective length of query: 96 effective length of database: 7,002,454 effective search space: 672235584 effective search space used: 672235584 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.1 bits) S2: 56 (26.2 bits)