BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= P00572 (216 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 2TMK-A nrPDB 444 e-125 5UIV-A nrPDB 194 2e-50 1E2Q-A nrPDB 161 2e-40 2WWH-A nrPDB 144 3e-35 2W0S-A nrPDB 132 1e-31 4S35-A nrPDB 67 4e-12 3HJN-A nrPDB 63 8e-11 3V9P-A nrPDB 57 4e-09 5X7J-A nrPDB 54 3e-08 3LV8-A nrPDB 53 1e-07 4MQB-A nrPDB 50 6e-07 4TMK-A nrPDB 49 2e-06 4RZX-A nrPDB 48 2e-06 5NRN-A nrPDB 46 1e-05 3LD9-A nrPDB 46 1e-05 3UWO-A nrPDB 43 1e-04 5V36-A nrPDB 29 1.4 1W1Z-A nrPDB 29 1.6 3R7W-B nrPDB 29 1.8 2P8U-A nrPDB 28 2.6 6BT9-A nrPDB 28 3.2 6ID0-C nrPDB 28 3.6 3ZRR-A nrPDB 27 5.3 1RZ3-A nrPDB 27 5.5 3RYT-A nrPDB 27 6.9 5VF3-a nrPDB 27 7.5 1OMO-A nrPDB 27 7.6 1SC8-U nrPDB 27 8.1 2EB0-A nrPDB 27 8.4 >2TMK-A nrPDB Length = 216 Score = 444 bits (1141), Expect = e-125, Method: Compositional matrix adjust. Identities = 216/216 (100%), Positives = 216/216 (100%) Query: 1 MMGRGKLILIEGLDRTGKTTQCNILYKKLQPNCKLLKFPERSTRIGGLINEYLTDDSFQL 60 MMGRGKLILIEGLDRTGKTTQCNILYKKLQPNCKLLKFPERSTRIGGLINEYLTDDSFQL Sbjct: 1 MMGRGKLILIEGLDRTGKTTQCNILYKKLQPNCKLLKFPERSTRIGGLINEYLTDDSFQL 60 Query: 61 SDQAIHLLFSANRWEIVDKIKKDLLEGKNIVMDRYVYSGVAYSAAKGTNGMDLDWCLQPD 120 SDQAIHLLFSANRWEIVDKIKKDLLEGKNIVMDRYVYSGVAYSAAKGTNGMDLDWCLQPD Sbjct: 61 SDQAIHLLFSANRWEIVDKIKKDLLEGKNIVMDRYVYSGVAYSAAKGTNGMDLDWCLQPD 120 Query: 121 VGLLKPDLTLFLSTQDVDNNAEKSGFGDERYETVKFQEKVKQTFMKLLDKEIRKGDESIT 180 VGLLKPDLTLFLSTQDVDNNAEKSGFGDERYETVKFQEKVKQTFMKLLDKEIRKGDESIT Sbjct: 121 VGLLKPDLTLFLSTQDVDNNAEKSGFGDERYETVKFQEKVKQTFMKLLDKEIRKGDESIT 180 Query: 181 IVDVTNKGIQEVEALIWQIVEPVLSTHIDHDKFSFF 216 IVDVTNKGIQEVEALIWQIVEPVLSTHIDHDKFSFF Sbjct: 181 IVDVTNKGIQEVEALIWQIVEPVLSTHIDHDKFSFF 216 >5UIV-A nrPDB Length = 227 Score = 194 bits (493), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 116/227 (51%), Positives = 150/227 (66%), Gaps = 18/227 (7%) Query: 3 GRGKLILIEGLDRTGKTTQCNILYKKLQPNCKLLKFPERSTRIGGLINEYLTDDSFQLSD 62 RG+LILIEGLDR+GK+TQ +IL KL P KL+KFP+RST IG LINEYLT+ SF LSD Sbjct: 5 ARGQLILIEGLDRSGKSTQASILSTKLSP-SKLIKFPDRSTPIGKLINEYLTNKSFTLSD 63 Query: 63 QAIHLLFSANRWEIVDKIKKDLLEGKNIVMDRYVYSGVAYSAAK----------GTNGMD 112 QA HLLFSANRWE+ +I+ L +G I++DRY+YSG+AY+ AK G N Sbjct: 64 QAAHLLFSANRWELSQQIQDLLNQGYFIILDRYIYSGIAYTLAKNDFHDETISQGKNKQQ 123 Query: 113 L---DWCLQPDVGLLKPDLTLFLSTQDVDNNAEKSGFGDERYETVKFQEKVKQTFMKLLD 169 L DW L PD GL KPDLTL T D++ +++ G+GDERYE +FQ KVKQ F+++LD Sbjct: 124 LNNIDWLLSPDKGLPKPDLTL-FLTLDLEEISKRKGWGDERYELQQFQAKVKQCFLEILD 182 Query: 170 KEIRKGDESITIVDVTNKGIQEVEALIWQIVEPVLSTHIDHDKFSFF 216 D +I IVDV K I +V +W+I+E + + +D F Sbjct: 183 T---NKDPTIRIVDVGGKTIDQVTTQLWEIIETNKNHELINDSIQFI 226 >1E2Q-A nrPDB Length = 215 Score = 161 bits (408), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 85/168 (50%), Positives = 110/168 (65%), Gaps = 7/168 (4%) Query: 4 RGKLILIEGLDRTGKTTQCNILYKKLQP---NCKLLKFPERSTRIGGLINEYLTDDSFQL 60 RG LI++EG+DR GK+TQ L + L +LL+FPERST IG L++ YL S + Sbjct: 8 RGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLQKKS-DV 66 Query: 61 SDQAIHLLFSANRWEIVDKIKKDLLEGKNIVMDRYVYSGVAYSAAKGTNGMDLDWCLQPD 120 D ++HLLFSANRWE V IK+ L +G +V+DRY +SGVA++ AK LDWC QPD Sbjct: 67 EDHSVHLLFSANRWEQVPLIKEKLSQGVTLVVDRYAFSGVAFTGAK--ENFSLDWCKQPD 124 Query: 121 VGLLKPDLTLFLSTQDVDNNAEKSGFGDERYETVKFQEKVKQTFMKLL 168 VGL KPDL LFL Q D A++ FG ERYE FQE+ + F +L+ Sbjct: 125 VGLPKPDLVLFLQLQLAD-AAKRGAFGHERYENGAFQERALRCFHQLM 171 >2WWH-A nrPDB Length = 212 Score = 144 bits (363), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 89/217 (41%), Positives = 134/217 (61%), Gaps = 19/217 (8%) Query: 4 RGKLILIEGLDRTGKTTQCNILYKKLQPN---CKLLKFPERSTRIGGLINEYLTDDSFQL 60 +GK I+ EGLDR+GK+TQ +L + L+ N K L FP R T IG +I++YL ++ + Sbjct: 9 KGKFIVFEGLDRSGKSTQSKLLVEYLKNNNVEVKHLYFPNRETGIGQIISKYLKMEN-SM 67 Query: 61 SDQAIHLLFSANRWEIVDKIKKDLLEGKNIVMDRYVYSGVAYSAAKGTNGMDLDWCLQPD 120 S++ IHLLFSANRWE +++IK LL+G +V DRY YSGVAYS+ G ++ WC+ PD Sbjct: 68 SNETIHLLFSANRWEHMNEIKSLLLKGIWVVCDRYAYSGVAYSS--GALNLNKTWCMNPD 125 Query: 121 VGLLKPDLTLFLSTQDVDNNAE-KSGFGDERYETVKFQEKVKQTFMKLLDKEIRKGDESI 179 GL+KPD+ +L+ N A+ +S +G+E YE V+ Q+K+ +T+ K D I Sbjct: 126 QGLIKPDVVFYLNVP--PNYAQNRSDYGEEIYEKVETQKKIYETY-----KHFAHEDYWI 178 Query: 180 TIVDVTNKGIQEVEALIWQIVEPVLSTHIDHDKFSFF 216 I D T K +E + IV+ V ++ ++F+F Sbjct: 179 NI-DATRK----IEDIHNDIVKEVTKIKVEPEEFNFL 210 >2W0S-A nrPDB Length = 204 Score = 132 bits (332), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 74/172 (43%), Positives = 110/172 (63%), Gaps = 12/172 (6%) Query: 2 MGRGKLILIEGLDRTGKTTQCNILYKKLQPNC-KLLKFPERSTRIGGLINEYLTDDSFQL 60 M RG LI+ EGLD++GKTTQC + + + N K L FP+RST G +I++YLT Sbjct: 1 MSRGALIVFEGLDKSGKTTQCMNIMESIPANTIKYLNFPQRSTVTGKMIDDYLTRKK-TY 59 Query: 61 SDQAIHLLFSANRWEIVDKIKKDLLEGKNIVMDRYVYSGVAYSAAKGTNGMDLDWCLQPD 120 +D ++LLF ANRWE I++ L +G +++DRY +SGVAY+AAKG + M L + Sbjct: 60 NDHIVNLLFCANRWEFASFIQEQLEQGITLIVDRYAFSGVAYAAAKGAS-MTLSKSYES- 117 Query: 121 VGLLKPDLTLFL--STQDVDNNAEKSGFGDERYETVKFQEKVKQTFMKLLDK 170 GL KPDL +FL +++++ N G+E YE V FQ+KV Q + K++++ Sbjct: 118 -GLPKPDLVIFLESGSKEINRNV-----GEEIYEDVTFQQKVLQEYKKMIEE 163 >4S35-A nrPDB Length = 195 Score = 67.4 bits (163), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 57/189 (30%), Positives = 101/189 (53%), Gaps = 21/189 (11%) Query: 7 LILIEGLDRTGKTTQCNILYKKLQPN---CKLLKFPERSTRIGGLINEYLTDDSFQLSDQ 63 LI EG+D +GKTTQ LY+ L+ L + P T++G ++ E L + +L ++ Sbjct: 2 LIAFEGIDGSGKTTQAKKLYEYLKQKGYFVSLYREP-GGTKVGEVLREILLTE--ELDER 58 Query: 64 AIHLLFSANRWEIV-DKIKKDLLEGKNIVMDRYVYSGVAYSAAKGTNGMDLDWCLQPD-- 120 LLF A+R +++ +KI DL K +++DR+V S +AY G+D+++ + Sbjct: 59 TELLLFEASRSKLIEEKIIPDLKRDKVVILDRFVLSTIAYQGY--GKGLDVEFIKNLNEF 116 Query: 121 -VGLLKPDLTLFLSTQ-DVDNNAEKSGFGDERYETVKFQEKVKQTFMKLLDKEIRKGDES 178 +KPD+TL L D+ K R+E +F EKV++ F+ E+ K +E+ Sbjct: 117 ATRGVKPDITLLLDIPVDIALRRLKE---KNRFENKEFLEKVRKGFL-----ELAKEEEN 168 Query: 179 ITIVDVTNK 187 + ++D + + Sbjct: 169 VVVIDASGE 177 >3HJN-A nrPDB Length = 197 Score = 63.2 bits (152), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 58/190 (30%), Positives = 101/190 (53%), Gaps = 14/190 (7%) Query: 7 LILIEGLDRTGKTTQCNILYKKLQPNCK--LLKFPERSTRIGGLINEYLTDDSFQLSDQA 64 I EG+D +GK+TQ +L + L+ K +LK T G I + L ++ +++ +A Sbjct: 2 FITFEGIDGSGKSTQIQLLAQYLEKRGKKVILKREPGGTETGEKIRKILLEE--EVTPKA 59 Query: 65 IHLLFSANRWEIVDKIKKDLLEGKNIVMDRYVYSGVAYSAAKGTNGMDLDWCLQ--PDVG 122 LF A+R +V +IK+ L EG +++DRY S VAY G ++ L G Sbjct: 60 ELFLFLASRNLLVTEIKQYLSEGYAVLLDRYTDSSVAYQGFGRNLGKEIVEELNDFATDG 119 Query: 123 LLKPDLTLFLSTQDVDNNAEKSGFGDERYETVKFQEKVKQTFMKLLDKEIRKGDESITIV 182 L+ PDLT ++ DV+ ++ G + R+E +F E+V++ ++ L R+ E I ++ Sbjct: 120 LI-PDLTFYIDV-DVETALKRKGELN-RFEKREFLERVREGYLVL----AREHPERIVVL 172 Query: 183 DVTNKGIQEV 192 D + I+E+ Sbjct: 173 D-GKRSIEEI 181 >3V9P-A nrPDB Length = 227 Score = 57.4 bits (137), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 55/201 (27%), Positives = 86/201 (42%), Gaps = 27/201 (13%) Query: 2 MGRGKLILIEGLDRTGKTTQ----CNILYKKLQPNCK--LLKFPERSTRIGGLINEYLTD 55 M RGK I EG+D GKTT C+ L ++L P + ++ TR+G + E L + Sbjct: 22 MARGKFITFEGIDGAGKTTHLQWFCDRLQERLGPAGRHVVVTREPGGTRLGETLREILLN 81 Query: 56 DSFQLSDQAIHLLFSANRWEIVDKIKKDLLEGKNIVMDRYVYSGVAYSAAKGTNGMDLD- 114 L +A+ L+F+ R + I+ L G +V DR+ + AY G G+ D Sbjct: 82 QPMDLETEAL-LMFAGRREHLALVIEPALARGDWVVSDRFTDATFAYQG--GGRGLPRDK 138 Query: 115 ------WCLQPDVGLLKPDLTLFLSTQDVDNNAEKSGFGDERYETVKFQEKVKQTFMKLL 168 W G +PDLT+ DV + G R KF+ + F + Sbjct: 139 LEALERWV----QGGFQPDLTVLF---DVPPQIASARRGAVRMPD-KFESESDAFFARTR 190 Query: 169 DKEIRKGDES---ITIVDVTN 186 + +R+ E+ IVD + Sbjct: 191 AEYLRRAQEAPHRFVIVDSSE 211 >5X7J-A nrPDB Length = 198 Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 58/182 (31%), Positives = 83/182 (45%), Gaps = 30/182 (16%) Query: 5 GKLILIEGLDRTGKTTQCNILYKKLQPNCKLLKFPERSTR-IGGLINE----YLTDDSFQ 59 G + +EGLD +GKTTQ L L+ + P TR GG + E LT + Sbjct: 3 GLFLTLEGLDGSGKTTQARRLAAFLEAQGR----PVLLTREPGGGLPEVRSLLLTQE--- 55 Query: 60 LSDQAIHLLFSANRWEIVDK-IKKDLLEGKNIVMDRYVYSGVAYSAAKGTNGMDLDW--- 115 LS +A +LLFSA+R E V K I L GK ++ DRY+ S +AY G+ L W Sbjct: 56 LSPEAEYLLFSADRAEHVRKVILPGLAAGKVVISDRYLDSSLAYQGY--GRGLPLPWLRE 113 Query: 116 CLQPDVGLLKPDLTLFL------STQDVDNNAEKSGFGDERYETVKFQEKVKQTFMKLLD 169 + LKP LT L + + V G G ++F +V++ ++ L Sbjct: 114 VAREATRGLKPRLTFLLDLPPEAALRRVRRPDRLEGLG------LEFFRRVREGYLALAR 167 Query: 170 KE 171 E Sbjct: 168 AE 169 >3LV8-A nrPDB Length = 236 Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 60/213 (28%), Positives = 100/213 (46%), Gaps = 20/213 (9%) Query: 5 GKLILIEGLDRTGKTTQCNILYKKLQPNCKLLKFPERSTRIGG-LINEYLT------DDS 57 K I+IEGL+ GK+T ++ + LQ N + R+ GG L+ E L Sbjct: 27 AKFIVIEGLEGAGKSTAIQVVVETLQQNG--IDHITRTREPGGTLLAEKLRALVKEEHPG 84 Query: 58 FQLSDQAIHLLFSANRWEIVDK-IKKDLLEGKNIVMDRYVYSGVAY-SAAKGTNGMDLDW 115 +L D LL A R ++V+ IK L G+ +V DR+ S AY + + Sbjct: 85 EELQDITELLLVYAARVQLVENVIKPALARGEWVVGDRHDMSSQAYQGGGRQIAPSTMQS 144 Query: 116 CLQPDVGLLKPDLTLFLSTQDVDNNAEKSGFGD-ERYET--VKFQEKVKQTFMKLLDKEI 172 Q +G KPDLTL+L G G+ +R E + F E+ ++ +++L + Sbjct: 145 LKQTALGDFKPDLTLYLDIDPKLGLERARGRGELDRIEKMDISFFERARERYLELANS-- 202 Query: 173 RKGDESITIVDVTNKGIQEVEALIWQIVEPVLS 205 D+S+ ++D + I++V A I + ++ LS Sbjct: 203 ---DDSVVMIDAA-QSIEQVTADIRRALQDWLS 231 >4MQB-A nrPDB Length = 208 Score = 50.4 bits (119), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 50/180 (27%), Positives = 90/180 (50%), Gaps = 18/180 (10%) Query: 7 LILIEGLDRTGKTTQCNILYKKLQPNCKLLKFPERSTRIGGL-INEYLTDDSFQLSDQAI 65 I EG + +GKTT N +Y +L + ++ E GG+ E + + +D I Sbjct: 7 FITFEGPEGSGKTTVINEVYHRLVKDYDVIMTREP----GGVPTGEEIRKIVLEGNDMDI 62 Query: 66 H---LLFSANRWE-IVDKIKKDLLEGKNIVMDRYVYSGVAYSA-AKGTNGMDLDWCLQPD 120 +LF+A+R E +V K+ L EGK ++ DRY+ S +AY A+G ++ + Sbjct: 63 RTEAMLFAASRREHLVLKVIPALKEGKVVLCDRYIDSSLAYQGYARGIGVEEVRALNEFA 122 Query: 121 VGLLKPDLTLFLST------QDVDNNAEKSGFGDERYETVKFQEKVKQTFMKLLDKEIRK 174 + L PDLT++L+ + + N+ D+ E +KF EKV + + +++ E ++ Sbjct: 123 INGLYPDLTIYLNVSAEVGRERIIKNSRDQNRLDQ--EDLKFHEKVIEGYQEIIHNESQR 180 >4TMK-A nrPDB Length = 213 Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 61/207 (29%), Positives = 98/207 (47%), Gaps = 25/207 (12%) Query: 4 RGKLILIEGLDRTGKTTQCNILYKKL-QPNCKLLKFPER--STRIGGLINEYLTD----D 56 R K I+IEGL+ GKTT N++ + L Q + + F T++ + L D Sbjct: 2 RSKYIVIEGLEGAGKTTARNVVVETLEQLGIRDMVFTREPGGTQLAEKLRSLLLDIKSVG 61 Query: 57 SFQLSDQAIHLLFSANRWEIVDK-IKKDLLEGKNIVMDRYVYSGVAYSAAKGTNGMD--- 112 ++D+A L+F A R ++V+ IK L G ++ DR+ S AY G G+D Sbjct: 62 DEVITDKAEVLMFYAARVQLVETVIKPALANGTWVIGDRHDLSTQAYQG--GGRGIDQHM 119 Query: 113 LDWCLQPDVGLLKPDLTLFLS-TQDVD-NNAEKSGFGDE-RYETVKFQEKVKQTFMKLLD 169 L +G +PDLTL+L T +V A G D E+ F + + +++L Sbjct: 120 LATLRDAVLGDFRPDLTLYLDVTPEVGLKRARARGELDRIEQESFDFFNRTRARYLELAA 179 Query: 170 KEIRKGDESITIVDVTNKGIQEVEALI 196 + D+SI +D T Q +EA++ Sbjct: 180 Q-----DKSIHTIDAT----QPLEAVM 197 >4RZX-A nrPDB Length = 213 Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 39/134 (29%), Positives = 69/134 (51%), Gaps = 9/134 (6%) Query: 2 MGRGKLILIEGLDRTGKTTQCNIL--YKKLQPNCKLLKFPERSTRIGGLINEYLTDDSF- 58 M +G LI EG+D +GK++Q +L + +L+ + L ++ S I +I E D Sbjct: 1 MKKGVLIAFEGIDGSGKSSQATLLKDWIELKRDVYLTEW-NSSDWIHDIIKEAKKKDLLT 59 Query: 59 QLSDQAIHLLFSANRWEIVDKIKKDLLEGKNIVMDRYVYSGVAYSAAKGTNGMDLDWCLQ 118 L+ IH ++R+E I L G ++ DRY+Y+ A + + G+D+DW + Sbjct: 60 PLTFSLIHATDFSDRYE--RYILPMLKSGFIVISDRYIYTAYARDSVR---GVDIDWVKK 114 Query: 119 PDVGLLKPDLTLFL 132 +KPD+T ++ Sbjct: 115 LYSFAIKPDITFYI 128 >5NRN-A nrPDB Length = 214 Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 43/140 (30%), Positives = 63/140 (45%), Gaps = 14/140 (10%) Query: 7 LILIEGLDRTGKTTQCNIL---YKKLQPNCKLLKFPERSTRIGG-LINEYLTDDSFQLSD 62 LI IEG+D GK T L ++ + L FP + + E L + L+ Sbjct: 2 LIAIEGVDGAGKRTLVEKLSGAFRAAGRSVATLAFPRYGQSVAADIAAEALHGEHGDLAS 61 Query: 63 Q--AIHLLFSANRWEIVDKIKKDLLEGKNIV-MDRYVYSGVAYSAAK---GTNGMDLDWC 116 A+ LF+ +R V I+ L G ++V +DRYV S AYSAA+ G W Sbjct: 62 SVYAMATLFALDRAGAVHTIQ-GLCRGYDVVILDRYVASNAAYSAARLHENAAGKAAAWV 120 Query: 117 LQ---PDVGLLKPDLTLFLS 133 + +GL KPD + L+ Sbjct: 121 QRIEFARLGLPKPDWQVLLA 140 >3LD9-A nrPDB Length = 223 Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 50/179 (27%), Positives = 85/179 (47%), Gaps = 18/179 (10%) Query: 3 GRGKL-ILIEGLDRTGKTTQCNILYKKLQP-----NCKLLKFPERSTRIGGLINEYLTDD 56 G G + I EG+D +GKTTQ ++L + L N L + P G L+NE + + Sbjct: 18 GPGSMFITFEGIDGSGKTTQSHLLAEYLSEIYGVNNVVLTREPG-----GTLLNESVRNL 72 Query: 57 SFQLS--DQAIHLLF--SANRWEIVDKIKKDLLEGKNIVMDRYVYSGVAYSA-AKGTNGM 111 F+ D LLF + R V IK L++ K ++ DR++ S +AY +G + Sbjct: 73 LFKAQGLDSLSELLFFIAMRREHFVKIIKPSLMQKKIVICDRFIDSTIAYQGYGQGIDCS 132 Query: 112 DLDWCLQPDVGLLKPDLTLFLSTQDVDNNAEKSGFGDERYETVKFQEKVKQTFMKLLDK 170 +D L V + PD+T F+ D++ + +S + ++F +V+ F + K Sbjct: 133 LIDQ-LNDLVIDVYPDIT-FIIDVDINESLSRSCKNGYEFADMEFYYRVRDGFYDIAKK 189 >3UWO-A nrPDB Length = 220 Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 46/176 (26%), Positives = 79/176 (44%), Gaps = 20/176 (11%) Query: 5 GKLILIEGLDRTGKTTQCNILYKKLQPN---CKLLKFPERSTRIGGLINEYL--TDDSFQ 59 G + +EG + GK+T + L ++L+ +L + P T + I E L D Sbjct: 11 GLFVTLEGPEGAGKSTNRDYLAERLRERGIEVQLTREPG-GTPLAERIRELLLAPSDEPM 69 Query: 60 LSDQAIHLLFSANRWEIVDKIKKDLLEGKNIVMDRYVYSGVAYSAAKGTNGMD------L 113 +D + L+F+A + I+ L G ++ DR+ + AY G G+ L Sbjct: 70 AADTELLLMFAARAQHLAGVIRPALARGAVVLCDRFTDATYAYQG--GGRGLPEARIAAL 127 Query: 114 DWCLQPDVGLLKPDLTLFLSTQDVDNNAEKSGFGD-ERYET--VKFQEKVKQTFMK 166 + +Q D L+PDLTL A + G +R+E +F E V+QT+++ Sbjct: 128 ESFVQGD---LRPDLTLVFDLPVEIGLARAAARGRLDRFEQEDRRFFEAVRQTYLQ 180 >5V36-A nrPDB Length = 453 Score = 29.3 bits (64), Expect = 1.4, Method: Compositional matrix adjust. Identities = 22/87 (25%), Positives = 32/87 (36%), Gaps = 10/87 (11%) Query: 2 MGRGKLILIEGLDRTGKTTQCNILYKKLQPNCKLLKFPERSTRIGGLINEYLTDDSFQLS 61 M K+IL EG G + KK+ ++ IN Y D F ++ Sbjct: 28 MHGAKVILFEGKQVGGTCVNVGCVPKKVM---------WYGAQVAETINNYAADYGFDVT 78 Query: 62 DQAIHL-LFSANRWEIVDKIKKDLLEG 87 QA H + NR +D+I G Sbjct: 79 TQAFHFDVLKQNRQAYIDRIHDSYERG 105 >1W1Z-A nrPDB Length = 328 Score = 28.9 bits (63), Expect = 1.6, Method: Compositional matrix adjust. Identities = 15/44 (34%), Positives = 27/44 (61%), Gaps = 3/44 (6%) Query: 59 QLSDQAIHLLFSANRWEIVDKIKKDLLEGKNIVMDRYVYSGVAY 102 Q D++ + + AN E + +++ D++EG +IVM V G+AY Sbjct: 218 QFGDKSTYQMNPANTEEAMKEVELDIVEGADIVM---VKPGLAY 258 >3R7W-B nrPDB Length = 331 Score = 28.9 bits (63), Expect = 1.8, Method: Compositional matrix adjust. Identities = 8/25 (32%), Positives = 18/25 (72%) Query: 7 LILIEGLDRTGKTTQCNILYKKLQP 31 ++L+ G+ R GK++ C +++ +QP Sbjct: 1 MVLLMGVRRCGKSSICKVVFHNMQP 25 >2P8U-A nrPDB Length = 478 Score = 28.1 bits (61), Expect = 2.6, Method: Compositional matrix adjust. Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 3/55 (5%) Query: 115 WCLQPDVGLLKPDLTLFLSTQDVDNNAEKSG---FGDERYETVKFQEKVKQTFMK 166 +C L + L FL+ Q+ D N+ SG FGD + E F V++ FMK Sbjct: 275 YCKLVQKSLARMLLNDFLNDQNRDKNSIYSGLEAFGDVKLEDTYFDRDVEKAFMK 329 >6BT9-A nrPDB Length = 672 Score = 28.1 bits (61), Expect = 3.2, Method: Composition-based stats. Identities = 24/63 (38%), Positives = 31/63 (49%), Gaps = 12/63 (19%) Query: 95 YVYSGVAYSAAKGTNGMDLDWCLQPDV-----GLLKPD----LTLFLSTQDVDNNAEKSG 145 + S VA+ A G +G+DLDW P V G +P+ TL L QDV N K+G Sbjct: 186 FAESTVAFLRAYGFDGVDLDW-EYPGVETIPGGSYRPEDKQNFTLLL--QDVRNALNKAG 242 Query: 146 FGD 148 D Sbjct: 243 AED 245 >6ID0-C nrPDB Length = 972 Score = 27.7 bits (60), Expect = 3.6, Method: Compositional matrix adjust. Identities = 17/53 (32%), Positives = 27/53 (50%) Query: 24 ILYKKLQPNCKLLKFPERSTRIGGLINEYLTDDSFQLSDQAIHLLFSANRWEI 76 IL KL P K + GLI+ Y TD++ LS ++ FS++++ I Sbjct: 264 ILELKLPPTDAYYKLRHIVDEVNGLISMYSTDENLILSPLLGNVCFSSSQYSI 316 >3ZRR-A nrPDB Length = 384 Score = 27.3 bits (59), Expect = 5.3, Method: Compositional matrix adjust. Identities = 20/80 (25%), Positives = 40/80 (50%), Gaps = 1/80 (1%) Query: 120 DVGLLKPDLTLFLSTQDVDNNAEKSGFGDERYETVKFQEKVKQTFMKLLDKEIRKGDESI 179 +V +L+P ++ +V+ KS + V+ V++ +++K IRK E I Sbjct: 102 NVKVLRPSPGDYVKPGEVEEEVRKSEYKLVALTHVETSTGVREPVKDVINK-IRKYVELI 160 Query: 180 TIVDVTNKGIQEVEALIWQI 199 + V++ G +EV+A W + Sbjct: 161 VVDGVSSVGAEEVKAEEWNV 180 >1RZ3-A nrPDB Length = 201 Score = 27.3 bits (59), Expect = 5.5, Method: Compositional matrix adjust. Identities = 14/27 (51%), Positives = 20/27 (74%), Gaps = 1/27 (3%) Query: 5 GKLIL-IEGLDRTGKTTQCNILYKKLQ 30 G+L+L I+GL R+GKTT N L + L+ Sbjct: 21 GRLVLGIDGLSRSGKTTLANQLSQTLR 47 >3RYT-A nrPDB Length = 626 Score = 26.9 bits (58), Expect = 6.9, Method: Compositional matrix adjust. Identities = 14/41 (34%), Positives = 20/41 (48%), Gaps = 8/41 (19%) Query: 75 EIVDKIKKDLLEGKNIVMDRYVYSGVAYSAAKGTNGMDLDW 115 + V ++K+ LL+ VY GV YS MDL+W Sbjct: 256 DTVTQVKEKLLDA--------VYKGVPYSQRPKAGDMDLEW 288 >5VF3-a nrPDB Length = 417 Score = 26.9 bits (58), Expect = 7.5, Method: Compositional matrix adjust. Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 5/48 (10%) Query: 75 EIVDKIKKDLLEGKNIVMDRYVYSGVAYSAAKGTNGMDLDWCLQPDVG 122 E+ D+I KD+L+ V RY +G+ S +DL + P+ G Sbjct: 195 EMADEINKDILQSLITVSKRYKVTGITDSGF-----IDLSYASAPEAG 237 >1OMO-A nrPDB Length = 322 Score = 26.6 bits (57), Expect = 7.6, Method: Compositional matrix adjust. Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 2/47 (4%) Query: 170 KEIRKGDESITIVDVTNKGIQEVEALIWQIVEPVLSTHIDHDKFSFF 216 K+ R+ DE ITI D T IQ+V A+ + E LS ++ K FF Sbjct: 276 KDGRESDEEITIFDSTGLAIQDV-AVAKVVYENALSKNVG-SKIKFF 320 >1SC8-U nrPDB Length = 262 Score = 26.6 bits (57), Expect = 8.1, Method: Compositional matrix adjust. Identities = 14/54 (25%), Positives = 23/54 (42%) Query: 116 CLQPDVGLLKPDLTLFLSTQDVDNNAEKSGFGDERYETVKFQEKVKQTFMKLLD 169 C QP + L + + E +GFG E + E++K T +KL+ Sbjct: 125 CAQPSRTIQTISLPSMYNDPQFGTSCEITGFGKENSTDYLYPEQLKMTVVKLIS 178 >2EB0-A nrPDB Length = 307 Score = 26.6 bits (57), Expect = 8.4, Method: Compositional matrix adjust. Identities = 20/76 (26%), Positives = 38/76 (50%) Query: 121 VGLLKPDLTLFLSTQDVDNNAEKSGFGDERYETVKFQEKVKQTFMKLLDKEIRKGDESIT 180 VG LKP+ + + ++ D N +K G G V E K+ KLL+++++ + Sbjct: 190 VGKLKPEEIINMDFKNFDFNGKKVGIGQVEVIDVSEVESKKEDIYKLLEEKLKNEGYDLI 249 Query: 181 IVDVTNKGIQEVEALI 196 + +T+ + EAL+ Sbjct: 250 VFLITDIMKEGSEALV 265 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 2TMK-A nrPDB 298 9e-82 2WWH-A nrPDB 228 2e-60 5UIV-A nrPDB 221 2e-58 1E2Q-A nrPDB 192 9e-50 3LV8-A nrPDB 178 1e-45 2W0S-A nrPDB 168 2e-42 3V9P-A nrPDB 166 9e-42 3HJN-A nrPDB 163 4e-41 3LD9-A nrPDB 160 4e-40 4TMK-A nrPDB 157 3e-39 3UWO-A nrPDB 156 6e-39 4S35-A nrPDB 154 3e-38 4MQB-A nrPDB 153 5e-38 5X7J-A nrPDB 147 3e-36 4RZX-A nrPDB 131 2e-31 5NRN-A nrPDB 119 7e-28 Sequences not found previously or not previously below threshold: 3TEF-A nrPDB 39 0.002 5LNK-k nrPDB 39 0.002 3CM0-A nrPDB 38 0.004 3UMF-A nrPDB 37 0.007 3SR0-A nrPDB 35 0.017 2A30-A nrPDB 35 0.017 3L0S-A nrPDB 35 0.019 4F4J-A nrPDB 35 0.020 3E70-C nrPDB 34 0.048 6FRK-x nrPDB 34 0.061 3JAJ-z nrPDB 34 0.068 5L3Q-A nrPDB 33 0.078 1XMS-A nrPDB 33 0.097 5OCH-A nrPDB 33 0.099 4YEG-A nrPDB 33 0.11 4G1U-C nrPDB 33 0.12 4CVN-A nrPDB 33 0.13 1TEV-A nrPDB 32 0.14 5CB6-A nrPDB 32 0.14 2BWJ-A nrPDB 32 0.15 3TR0-A nrPDB 32 0.16 5L3R-A nrPDB 32 0.20 3UIE-A nrPDB 32 0.21 3A4L-A nrPDB 32 0.22 4YER-A nrPDB 32 0.24 4BZX-A nrPDB 32 0.25 2FEM-A nrPDB 32 0.28 2BBW-A nrPDB 31 0.30 2V3C-C nrPDB 31 0.35 1X6V-B nrPDB 31 0.37 5L3R-B nrPDB 31 0.39 2OG2-A nrPDB 31 0.39 6BT9-A nrPDB 31 0.43 4WIA-A nrPDB 31 0.45 2J41-A nrPDB 31 0.47 2JAQ-A nrPDB 31 0.48 1UBG-A nrPDB 30 0.50 4E22-A nrPDB 30 0.53 2YVU-A nrPDB 30 0.55 1M7G-A nrPDB 30 0.55 3PFI-A nrPDB 30 0.58 3CUH-A nrPDB 30 0.60 1MO5-A nrPDB 30 0.60 5JRJ-A nrPDB 30 0.66 3ADK-A nrPDB 30 0.66 3CR7-A nrPDB 30 0.71 2PEY-A nrPDB 30 0.73 2OFX-A nrPDB 30 0.73 6G2J-O nrPDB 30 0.75 6QUZ-B nrPDB 30 0.85 1G6H-A nrPDB 30 0.90 3P4T-A nrPDB 30 0.91 1LVG-A nrPDB 30 0.91 1RZ3-A nrPDB 30 1.1 4FIN-A nrPDB 30 1.1 3C8U-A nrPDB 30 1.1 2F3T-A nrPDB 29 1.1 5EE5-B nrPDB 29 1.2 4RY2-A nrPDB 29 1.3 1SGW-A nrPDB 29 1.3 4Q7L-A nrPDB 29 1.4 5X6J-A nrPDB 29 1.4 6QUZ-A nrPDB 29 1.6 3TLX-A nrPDB 29 1.6 1ZAK-A nrPDB 29 1.6 3J15-B nrPDB 29 1.7 1P4S-A nrPDB 29 1.7 3DM5-A nrPDB 29 1.8 5GPN-q nrPDB 29 1.9 4MKG-A nrPDB 29 1.9 4WZ6-A nrPDB 29 1.9 2PZF-A nrPDB 29 1.9 3CR8-A nrPDB 29 1.9 2R6F-A nrPDB 29 1.9 2IXE-A nrPDB 29 1.9 2IW3-A nrPDB 29 1.9 3SI7-A nrPDB 29 2.0 3VX4-A nrPDB 29 2.0 5LJ6-A nrPDB 29 2.0 3UX8-A nrPDB 29 2.1 4Q1A-A nrPDB 29 2.3 5YV5-A nrPDB 29 2.3 1VIA-A nrPDB 29 2.3 4RVC-A nrPDB 29 2.4 5L3S-B nrPDB 29 2.4 3PV0-A nrPDB 29 2.5 4Q7K-A nrPDB 28 2.5 3TAU-A nrPDB 28 2.5 3LNC-A nrPDB 28 2.6 3ZQJ-A nrPDB 28 2.8 4MRS-A nrPDB 28 2.9 2FGK-A nrPDB 28 2.9 1Z83-A nrPDB 28 2.9 5G3Y-A nrPDB 28 3.0 3R20-A nrPDB 28 3.0 4XGU-A nrPDB 28 3.1 5JSZ-B nrPDB 28 3.2 2AX4-A nrPDB 28 3.3 4JYC-A nrPDB 28 3.4 3R8C-A nrPDB 28 3.4 2PCL-A nrPDB 28 3.4 5U1D-B nrPDB 28 3.5 5U1D-A nrPDB 28 3.5 1JJ7-A nrPDB 28 3.6 5L3S-A nrPDB 28 3.6 1S4Q-A nrPDB 28 3.6 2UVQ-A nrPDB 28 3.8 1QZX-A nrPDB 28 3.9 4RDY-A nrPDB 28 3.9 6HA8-V nrPDB 28 4.0 5WV8-A nrPDB 28 4.2 3GTU-B nrPDB 28 4.2 3HXT-A nrPDB 28 4.2 6IC4-I nrPDB 27 4.2 2BDT-A nrPDB 27 4.3 5C78-A nrPDB 27 4.5 1QF9-A nrPDB 27 4.5 1L2T-A nrPDB 27 4.5 5NIK-J nrPDB 27 4.6 1VA6-A nrPDB 27 4.6 5XU1-A nrPDB 27 5.0 1UKY-A nrPDB 27 5.0 4XGC-D nrPDB 27 5.1 1WDT-A nrPDB 27 5.3 1YE8-A nrPDB 27 5.5 5VQ9-D nrPDB 27 5.6 1YR7-A nrPDB 27 5.6 2GZA-A nrPDB 27 5.7 3FB4-A nrPDB 27 5.7 5LL6-h nrPDB 27 6.2 3NHB-A nrPDB 27 6.4 2C9Y-A nrPDB 27 6.6 3MD0-A nrPDB 27 7.4 6CS8-A nrPDB 27 7.5 4QBH-A nrPDB 27 7.8 5G41-A nrPDB 27 8.0 2VE7-C nrPDB 27 8.0 3PVS-A nrPDB 27 8.5 4QBG-B nrPDB 27 8.7 3HR8-A nrPDB 27 8.7 1XP8-A nrPDB 27 8.9 4C7O-A nrPDB 27 9.1 2YYZ-A nrPDB 26 9.7 CONVERGED! >2TMK-A nrPDB Length = 216 Score = 298 bits (764), Expect = 9e-82, Method: Composition-based stats. Identities = 216/216 (100%), Positives = 216/216 (100%) Query: 1 MMGRGKLILIEGLDRTGKTTQCNILYKKLQPNCKLLKFPERSTRIGGLINEYLTDDSFQL 60 MMGRGKLILIEGLDRTGKTTQCNILYKKLQPNCKLLKFPERSTRIGGLINEYLTDDSFQL Sbjct: 1 MMGRGKLILIEGLDRTGKTTQCNILYKKLQPNCKLLKFPERSTRIGGLINEYLTDDSFQL 60 Query: 61 SDQAIHLLFSANRWEIVDKIKKDLLEGKNIVMDRYVYSGVAYSAAKGTNGMDLDWCLQPD 120 SDQAIHLLFSANRWEIVDKIKKDLLEGKNIVMDRYVYSGVAYSAAKGTNGMDLDWCLQPD Sbjct: 61 SDQAIHLLFSANRWEIVDKIKKDLLEGKNIVMDRYVYSGVAYSAAKGTNGMDLDWCLQPD 120 Query: 121 VGLLKPDLTLFLSTQDVDNNAEKSGFGDERYETVKFQEKVKQTFMKLLDKEIRKGDESIT 180 VGLLKPDLTLFLSTQDVDNNAEKSGFGDERYETVKFQEKVKQTFMKLLDKEIRKGDESIT Sbjct: 121 VGLLKPDLTLFLSTQDVDNNAEKSGFGDERYETVKFQEKVKQTFMKLLDKEIRKGDESIT 180 Query: 181 IVDVTNKGIQEVEALIWQIVEPVLSTHIDHDKFSFF 216 IVDVTNKGIQEVEALIWQIVEPVLSTHIDHDKFSFF Sbjct: 181 IVDVTNKGIQEVEALIWQIVEPVLSTHIDHDKFSFF 216 >2WWH-A nrPDB Length = 212 Score = 228 bits (580), Expect = 2e-60, Method: Composition-based stats. Identities = 87/217 (40%), Positives = 132/217 (60%), Gaps = 17/217 (7%) Query: 3 GRGKLILIEGLDRTGKTTQCNILYKKLQPN---CKLLKFPERSTRIGGLINEYLTDDSFQ 59 +GK I+ EGLDR+GK+TQ +L + L+ N K L FP R T IG +I++YL ++ Sbjct: 8 KKGKFIVFEGLDRSGKSTQSKLLVEYLKNNNVEVKHLYFPNRETGIGQIISKYLKMEN-S 66 Query: 60 LSDQAIHLLFSANRWEIVDKIKKDLLEGKNIVMDRYVYSGVAYSAAKGTNGMDLDWCLQP 119 +S++ IHLLFSANRWE +++IK LL+G +V DRY YSGVAYS+ G ++ WC+ P Sbjct: 67 MSNETIHLLFSANRWEHMNEIKSLLLKGIWVVCDRYAYSGVAYSS--GALNLNKTWCMNP 124 Query: 120 DVGLLKPDLTLFLSTQDVDNNAEKSGFGDERYETVKFQEKVKQTFMKLLDKEIRKGDESI 179 D GL+KPD+ +L+ + +S +G+E YE V+ Q+K+ +T+ K D I Sbjct: 125 DQGLIKPDVVFYLNVPP-NYAQNRSDYGEEIYEKVETQKKIYETY-----KHFAHEDYWI 178 Query: 180 TIVDVTNKGIQEVEALIWQIVEPVLSTHIDHDKFSFF 216 I D T K +E + IV+ V ++ ++F+F Sbjct: 179 NI-DATRK----IEDIHNDIVKEVTKIKVEPEEFNFL 210 >5UIV-A nrPDB Length = 227 Score = 221 bits (563), Expect = 2e-58, Method: Composition-based stats. Identities = 109/227 (48%), Positives = 146/227 (64%), Gaps = 18/227 (7%) Query: 3 GRGKLILIEGLDRTGKTTQCNILYKKLQPNCKLLKFPERSTRIGGLINEYLTDDSFQLSD 62 RG+LILIEGLDR+GK+TQ +IL KL P+ KL+KFP+RST IG LINEYLT+ SF LSD Sbjct: 5 ARGQLILIEGLDRSGKSTQASILSTKLSPS-KLIKFPDRSTPIGKLINEYLTNKSFTLSD 63 Query: 63 QAIHLLFSANRWEIVDKIKKDLLEGKNIVMDRYVYSGVAYSAAKG---------TNGM-- 111 QA HLLFSANRWE+ +I+ L +G I++DRY+YSG+AY+ AK Sbjct: 64 QAAHLLFSANRWELSQQIQDLLNQGYFIILDRYIYSGIAYTLAKNDFHDETISQGKNKQQ 123 Query: 112 --DLDWCLQPDVGLLKPDLTLFLSTQDVDNNAEKSGFGDERYETVKFQEKVKQTFMKLLD 169 ++DW L PD GL KP T D++ +++ G+GDERYE +FQ KVKQ F+++LD Sbjct: 124 LNNIDWLLSPDKGLPKP-DLTLFLTLDLEEISKRKGWGDERYELQQFQAKVKQCFLEILD 182 Query: 170 KEIRKGDESITIVDVTNKGIQEVEALIWQIVEPVLSTHIDHDKFSFF 216 D +I IVDV K I +V +W+I+E + + +D F Sbjct: 183 T---NKDPTIRIVDVGGKTIDQVTTQLWEIIETNKNHELINDSIQFI 226 >1E2Q-A nrPDB Length = 215 Score = 192 bits (488), Expect = 9e-50, Method: Composition-based stats. Identities = 93/209 (44%), Positives = 125/209 (59%), Gaps = 12/209 (5%) Query: 4 RGKLILIEGLDRTGKTTQCNILYKKLQP---NCKLLKFPERSTRIGGLINEYLTDDSFQL 60 RG LI++EG+DR GK+TQ L + L +LL+FPERST IG L++ YL S + Sbjct: 8 RGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLQKKS-DV 66 Query: 61 SDQAIHLLFSANRWEIVDKIKKDLLEGKNIVMDRYVYSGVAYSAAKGTNGMDLDWCLQPD 120 D ++HLLFSANRWE V IK+ L +G +V+DRY +SGVA++ AK LDWC QPD Sbjct: 67 EDHSVHLLFSANRWEQVPLIKEKLSQGVTLVVDRYAFSGVAFTGAK--ENFSLDWCKQPD 124 Query: 121 VGLLKPDLTLFLSTQDVDNNAEKSGFGDERYETVKFQEKVKQTFMKLLDKEIRKGDESIT 180 VGL KPDL LFL Q D A++ FG ERYE FQE+ + F +L+ Sbjct: 125 VGLPKPDLVLFLQLQLAD-AAKRGAFGHERYENGAFQERALRCFHQLMKDTTLNWK---- 179 Query: 181 IVDVTNKGIQEVEALIWQIVEPVLSTHID 209 +VD + K I+ V I + E ++T + Sbjct: 180 MVDAS-KSIEAVHEDIRVLSEDAIATATE 207 >3LV8-A nrPDB Length = 236 Score = 178 bits (452), Expect = 1e-45, Method: Composition-based stats. Identities = 55/211 (26%), Positives = 97/211 (45%), Gaps = 16/211 (7%) Query: 5 GKLILIEGLDRTGKTTQCNILYKKLQPNCK---LLKFPERSTRIGGLINEYLTDDSF--Q 59 K I+IEGL+ GK+T ++ + LQ N T + + + ++ + Sbjct: 27 AKFIVIEGLEGAGKSTAIQVVVETLQQNGIDHITRTREPGGTLLAEKLRALVKEEHPGEE 86 Query: 60 LSDQAIHLLFSANRWEIVD-KIKKDLLEGKNIVMDRYVYSGVAYS-AAKGTNGMDLDWCL 117 L D LL A R ++V+ IK L G+ +V DR+ S AY + + Sbjct: 87 LQDITELLLVYAARVQLVENVIKPALARGEWVVGDRHDMSSQAYQGGGRQIAPSTMQSLK 146 Query: 118 QPDVGLLKPDLTLFLSTQDVDNNAEKSGFGD-ERYE--TVKFQEKVKQTFMKLLDKEIRK 174 Q +G KPDLTL+L G G+ +R E + F E+ ++ +++L + Sbjct: 147 QTALGDFKPDLTLYLDIDPKLGLERARGRGELDRIEKMDISFFERARERYLELANS---- 202 Query: 175 GDESITIVDVTNKGIQEVEALIWQIVEPVLS 205 D+S+ ++D + I++V A I + ++ LS Sbjct: 203 -DDSVVMIDAA-QSIEQVTADIRRALQDWLS 231 >2W0S-A nrPDB Length = 204 Score = 168 bits (426), Expect = 2e-42, Method: Composition-based stats. Identities = 72/170 (42%), Positives = 106/170 (62%), Gaps = 8/170 (4%) Query: 2 MGRGKLILIEGLDRTGKTTQCNILYKKLQPN-CKLLKFPERSTRIGGLINEYLTDDSFQL 60 M RG LI+ EGLD++GKTTQC + + + N K L FP+RST G +I++YLT Sbjct: 1 MSRGALIVFEGLDKSGKTTQCMNIMESIPANTIKYLNFPQRSTVTGKMIDDYLTRKK-TY 59 Query: 61 SDQAIHLLFSANRWEIVDKIKKDLLEGKNIVMDRYVYSGVAYSAAKGTNGMDLDWCLQPD 120 +D ++LLF ANRWE I++ L +G +++DRY +SGVAY+AAKG + + + Sbjct: 60 NDHIVNLLFCANRWEFASFIQEQLEQGITLIVDRYAFSGVAYAAAKGAS---MTLSKSYE 116 Query: 121 VGLLKPDLTLFLSTQDVDNNAEKSGFGDERYETVKFQEKVKQTFMKLLDK 170 GL KPDL +FL + + N G+E YE V FQ+KV Q + K++++ Sbjct: 117 SGLPKPDLVIFLESGSKEIN---RNVGEEIYEDVTFQQKVLQEYKKMIEE 163 >3V9P-A nrPDB Length = 227 Score = 166 bits (419), Expect = 9e-42, Method: Composition-based stats. Identities = 53/209 (25%), Positives = 90/209 (43%), Gaps = 16/209 (7%) Query: 2 MGRGKLILIEGLDRTGKTTQ----CNILYKKLQPNCK--LLKFPERSTRIGGLINEYLTD 55 M RGK I EG+D GKTT C+ L ++L P + ++ TR+G + E L + Sbjct: 22 MARGKFITFEGIDGAGKTTHLQWFCDRLQERLGPAGRHVVVTREPGGTRLGETLREILLN 81 Query: 56 DSFQLSDQAIHLLFSANRWEIVDKIKKDLLEGKNIVMDRYVYSGVAYSAAKGTNGMD-LD 114 L +A L+F+ R + I+ L G +V DR+ + AY D L+ Sbjct: 82 QPMDLETEA-LLMFAGRREHLALVIEPALARGDWVVSDRFTDATFAYQGGGRGLPRDKLE 140 Query: 115 WCLQPDVGLLKPDLTLFLSTQDVDNNAEKSGFGDERYETVKFQEKVKQTFMKLLDKEIRK 174 + G +PDLT+ +A + G R KF+ + F + + +R+ Sbjct: 141 ALERWVQGGFQPDLTVLFDVPPQIASARR---GAVRMPD-KFESESDAFFARTRAEYLRR 196 Query: 175 GDE---SITIVDVTNKGIQEVEALIWQIV 200 E IVD + + I ++ + ++ Sbjct: 197 AQEAPHRFVIVDSS-EPIAQIRKQLEGVL 224 >3HJN-A nrPDB Length = 197 Score = 163 bits (413), Expect = 4e-41, Method: Composition-based stats. Identities = 58/202 (28%), Positives = 102/202 (50%), Gaps = 15/202 (7%) Query: 7 LILIEGLDRTGKTTQCNILYKKLQPNCK--LLKFPERSTRIGGLINEYLTDDSFQLSDQA 64 I EG+D +GK+TQ +L + L+ K +LK T G I + L ++ +++ +A Sbjct: 2 FITFEGIDGSGKSTQIQLLAQYLEKRGKKVILKREPGGTETGEKIRKILLEE--EVTPKA 59 Query: 65 IHLLFSANRWEIVDKIKKDLLEGKNIVMDRYVYSGVAYSAAKGTNGMDL-DWCLQPDVGL 123 LF A+R +V +IK+ L EG +++DRY S VAY G ++ + Sbjct: 60 ELFLFLASRNLLVTEIKQYLSEGYAVLLDRYTDSSVAYQGFGRNLGKEIVEELNDFATDG 119 Query: 124 LKPDLTLFLSTQDVDNNAEKSGFGDERYETVKFQEKVKQTFMKLLDKEIRKGDESITIVD 183 L PDLT ++ DV+ ++ G + R+E +F E+V++ ++ L R+ E I ++D Sbjct: 120 LIPDLTFYIDV-DVETALKRKGELN-RFEKREFLERVREGYLVLA----REHPERIVVLD 173 Query: 184 VTNKGIQEVEALIWQIVEPVLS 205 + I+E+ +V V Sbjct: 174 -GKRSIEEI---HRDVVREVKR 191 >3LD9-A nrPDB Length = 223 Score = 160 bits (405), Expect = 4e-40, Method: Composition-based stats. Identities = 51/210 (24%), Positives = 91/210 (43%), Gaps = 20/210 (9%) Query: 3 GRGK-LILIEGLDRTGKTTQCNILYKKLQP-----NCKLLKFPERSTRIGGLINEYLTDD 56 G G I EG+D +GKTTQ ++L + L N L + P G L+NE + + Sbjct: 18 GPGSMFITFEGIDGSGKTTQSHLLAEYLSEIYGVNNVVLTREPG-----GTLLNESVRNL 72 Query: 57 SFQLS--DQAIHLLF--SANRWEIVDKIKKDLLEGKNIVMDRYVYSGVAYSAAKGTNGMD 112 F+ D LLF + R V IK L++ K ++ DR++ S +AY Sbjct: 73 LFKAQGLDSLSELLFFIAMRREHFVKIIKPSLMQKKIVICDRFIDSTIAYQGYGQGIDCS 132 Query: 113 LDWCLQPDVGLLKPDLTLFLSTQDVDNNAEKSGFGDERYETVKFQEKVKQTFMKLLDKEI 172 L L V + PD+T + D++ + +S + ++F +V+ F + K Sbjct: 133 LIDQLNDLVIDVYPDITFIIDV-DINESLSRSCKNGYEFADMEFYYRVRDGFYDIAKKNP 191 Query: 173 RKGDESITIVDVTNK-GIQEVEALIWQIVE 201 + I D + I ++ + ++++ Sbjct: 192 HRCH---VITDKSETYDIDDINFVHLEVIK 218 >4TMK-A nrPDB Length = 213 Score = 157 bits (397), Expect = 3e-39, Method: Composition-based stats. Identities = 53/214 (24%), Positives = 92/214 (42%), Gaps = 18/214 (8%) Query: 4 RGKLILIEGLDRTGKTTQCNILYKKLQP---NCKLLKFPERSTRIGGLINEYLTD----D 56 R K I+IEGL+ GKTT N++ + L+ + T++ + L D Sbjct: 2 RSKYIVIEGLEGAGKTTARNVVVETLEQLGIRDMVFTREPGGTQLAEKLRSLLLDIKSVG 61 Query: 57 SFQLSDQAIHLLFSANRWEIVDK-IKKDLLEGKNIVMDRYVYSGVAYS-AAKGTNGMDLD 114 ++D+A L+F A R ++V+ IK L G ++ DR+ S AY +G + L Sbjct: 62 DEVITDKAEVLMFYAARVQLVETVIKPALANGTWVIGDRHDLSTQAYQGGGRGIDQHMLA 121 Query: 115 WCLQPDVGLLKPDLTLFLSTQDVDNNAEKSGFGD---ERYETVKFQEKVKQTFMKLLDKE 171 +G +PDLTL+L G+ E+ F + + +++L + Sbjct: 122 TLRDAVLGDFRPDLTLYLDVTPEVGLKRARARGELDRIEQESFDFFNRTRARYLELAAQ- 180 Query: 172 IRKGDESITIVDVTNKGIQEVEALIWQIVEPVLS 205 D+SI +D T + ++ V I V + Sbjct: 181 ----DKSIHTIDAT-QPLEAVMDAIRTTVTHWVK 209 >3UWO-A nrPDB Length = 220 Score = 156 bits (394), Expect = 6e-39, Method: Composition-based stats. Identities = 48/210 (22%), Positives = 89/210 (42%), Gaps = 15/210 (7%) Query: 5 GKLILIEGLDRTGKTTQCNILYKKLQPN---CKLLKFPERSTRIGGLINEYLT--DDSFQ 59 G + +EG + GK+T + L ++L+ +L + P T + I E L D Sbjct: 11 GLFVTLEGPEGAGKSTNRDYLAERLRERGIEVQLTREP-GGTPLAERIRELLLAPSDEPM 69 Query: 60 LSDQAIHLLFSANRWEIVDKIKKDLLEGKNIVMDRYVYSGVAYSAAKGTNGMD-LDWCLQ 118 +D + L+F+A + I+ L G ++ DR+ + AY + Sbjct: 70 AADTELLLMFAARAQHLAGVIRPALARGAVVLCDRFTDATYAYQGGGRGLPEARIAALES 129 Query: 119 PDVGLLKPDLTLFLSTQDVDNNAEKSGFGD-ERY--ETVKFQEKVKQTFMKLLDKEIRKG 175 G L+PDLTL A + G +R+ E +F E V+QT+++ + Sbjct: 130 FVQGDLRPDLTLVFDLPVEIGLARAAARGRLDRFEQEDRRFFEAVRQTYLQRAAQ----A 185 Query: 176 DESITIVDVTNKGIQEVEALIWQIVEPVLS 205 E ++D + EV+A + +++ +L Sbjct: 186 PERYQVLDAGL-PLAEVQAGLDRLLPNLLE 214 >4S35-A nrPDB Length = 195 Score = 154 bits (389), Expect = 3e-38, Method: Composition-based stats. Identities = 55/197 (27%), Positives = 102/197 (51%), Gaps = 17/197 (8%) Query: 7 LILIEGLDRTGKTTQCNILYKKLQPNCKL--LKFPERSTRIGGLINEYLTDDSFQLSDQA 64 LI EG+D +GKTTQ LY+ L+ L T++G ++ E L + +L ++ Sbjct: 2 LIAFEGIDGSGKTTQAKKLYEYLKQKGYFVSLYREPGGTKVGEVLREILLTE--ELDERT 59 Query: 65 IHLLFSANRWEIV-DKIKKDLLEGKNIVMDRYVYSGVAYSAAKGTNGMDLDWCLQ---PD 120 LLF A+R +++ +KI DL K +++DR+V S +AY G+D+++ Sbjct: 60 ELLLFEASRSKLIEEKIIPDLKRDKVVILDRFVLSTIAYQGY--GKGLDVEFIKNLNEFA 117 Query: 121 VGLLKPDLTLFLSTQDVDNNAEKSGFGDERYETVKFQEKVKQTFMKLLDKEIRKGDESIT 180 +KPD+TL L + A + R+E +F EKV++ F++L K +E++ Sbjct: 118 TRGVKPDITLLLDIPV--DIALRRLKEKNRFENKEFLEKVRKGFLELA-----KEEENVV 170 Query: 181 IVDVTNKGIQEVEALIW 197 ++D + + + + ++ Sbjct: 171 VIDASGEEEEVFKEILR 187 >4MQB-A nrPDB Length = 208 Score = 153 bits (386), Expect = 5e-38, Method: Composition-based stats. Identities = 49/208 (23%), Positives = 92/208 (44%), Gaps = 16/208 (7%) Query: 3 GRGKLILIEGLDRTGKTTQCNILYKKLQPNCKLLK-FPERSTRIGGLINEYLTDDSFQLS 61 I EG + +GKTT N +Y +L + ++ G I + + + + Sbjct: 3 AMSAFITFEGPEGSGKTTVINEVYHRLVKDYDVIMTREPGGVPTGEEIRKIVL-EGNDMD 61 Query: 62 DQAIHLLFSA-NRWEIVDKIKKDLLEGKNIVMDRYVYSGVAYSA-AKGTNGMDLDWCLQP 119 + +LF+A R +V K+ L EGK ++ DRY+ S +AY A+G ++ + Sbjct: 62 IRTEAMLFAASRREHLVLKVIPALKEGKVVLCDRYIDSSLAYQGYARGIGVEEVRALNEF 121 Query: 120 DVGLLKPDLTLFLST------QDVDNNAEKSGFGDERYETVKFQEKVKQTFMKLLDKEIR 173 + L PDLT++L+ + + N+ D+ E +KF EKV + + +++ E + Sbjct: 122 AINGLYPDLTIYLNVSAEVGRERIIKNSRDQNRLDQ--EDLKFHEKVIEGYQEIIHNESQ 179 Query: 174 KGDESITIVDVTNKGIQEVEALIWQIVE 201 + V+ VE I++ Sbjct: 180 R----FKSVNADQPLENVVEDTYQTIIK 203 >5X7J-A nrPDB Length = 198 Score = 147 bits (372), Expect = 3e-36, Method: Composition-based stats. Identities = 52/189 (27%), Positives = 79/189 (41%), Gaps = 18/189 (9%) Query: 4 RGKLILIEGLDRTGKTTQCNILYKKLQPNCK---LLKFPERSTRIGGLINEYLTDDSFQL 60 G + +EGLD +GKTTQ L L+ + L + P + L +L Sbjct: 2 PGLFLTLEGLDGSGKTTQARRLAAFLEAQGRPVLLTREPGGGLPE---VRSLLLTQ--EL 56 Query: 61 SDQAIHLLFSANRWEIVDK-IKKDLLEGKNIVMDRYVYSGVAYSAAKGTNGMDLDWCL-- 117 S +A +LLFSA+R E V K I L GK ++ DRY+ S +AY G+ L W Sbjct: 57 SPEAEYLLFSADRAEHVRKVILPGLAAGKVVISDRYLDSSLAYQGY--GRGLPLPWLREV 114 Query: 118 -QPDVGLLKPDLTLFLSTQDVDNNAEKSGFGDERYETVKFQEKVKQTFMKLLDKEIRKGD 176 + LKP LT L ++F +V++ ++ L E + Sbjct: 115 AREATRGLKPRLTFLLDLPPEAALRRVRRPDRLEGLGLEFFRRVREGYLALARAEPGR-- 172 Query: 177 ESITIVDVT 185 ++D T Sbjct: 173 --FVVLDAT 179 >4RZX-A nrPDB Length = 213 Score = 131 bits (329), Expect = 2e-31, Method: Composition-based stats. Identities = 52/215 (24%), Positives = 99/215 (46%), Gaps = 22/215 (10%) Query: 2 MGRGKLILIEGLDRTGKTTQCNIL--YKKLQPNCKLLKFPERSTRIGGLINEYLTDDSF- 58 M +G LI EG+D +GK++Q +L + +L+ + L ++ S I +I E D Sbjct: 1 MKKGVLIAFEGIDGSGKSSQATLLKDWIELKRDVYLTEW-NSSDWIHDIIKEAKKKDLLT 59 Query: 59 QLSDQAIHLLFSANRWEIVDKIKKDLLEGKNIVMDRYVYSGVAYSAAKGTNGMDLDWCLQ 118 L+ IH ++R+E I L G ++ DRY+Y+ A + + G+D+DW + Sbjct: 60 PLTFSLIHATDFSDRYE--RYILPMLKSGFIVISDRYIYTAYARDSVR---GVDIDWVKK 114 Query: 119 PDVGLLKPDLTLFLST-QDV--------DNNAEKSGFGDERYETVKFQEKVKQTFMKLLD 169 +KPD+T ++ D+ + G + + + +E + + L+ Sbjct: 115 LYSFAIKPDITFYIRVSPDIALERIKKSKRKIKPQEAGADIFPGLSPEEGFLK-YQGLIT 173 Query: 170 KEIRK--GDESITIVDVTNKGIQEVEALIWQIVEP 202 + K DE+ ++D T K +E++ I + V Sbjct: 174 EVYDKLVKDENFIVIDGT-KTPKEIQIQIRKFVGE 207 >5NRN-A nrPDB Length = 214 Score = 119 bits (299), Expect = 7e-28, Method: Composition-based stats. Identities = 47/185 (25%), Positives = 75/185 (40%), Gaps = 22/185 (11%) Query: 7 LILIEGLDRTGKTTQCNIL---YKKLQPNCKLLKFPERSTRIG-GLINEYLTDDSFQLSD 62 LI IEG+D GK T L ++ + L FP + + E L + L+ Sbjct: 2 LIAIEGVDGAGKRTLVEKLSGAFRAAGRSVATLAFPRYGQSVAADIAAEALHGEHGDLAS 61 Query: 63 Q--AIHLLFSANRWEIVDKIKKDLLEGK-NIVMDRYVYSGVAYSAAK---GTNGMDLDWC 116 A+ LF+ +R V I+ L G +++DRYV S AYSAA+ G W Sbjct: 62 SVYAMATLFALDRAGAVHTIQ-GLCRGYDVVILDRYVASNAAYSAARLHENAAGKAAAWV 120 Query: 117 LQ---PDVGLLKPDLTLFLST-------QDVDNNAEKSGFGDERYE-TVKFQEKVKQTFM 165 + +GL KPD + L+ + G + YE + Q++ + Sbjct: 121 QRIEFARLGLPKPDWQVLLAVSAELAGERSRGRAQRDPGRARDNYERDAELQQRTGAVYA 180 Query: 166 KLLDK 170 +L + Sbjct: 181 ELAAQ 185 >3TEF-A nrPDB Length = 292 Score = 38.6 bits (88), Expect = 0.002, Method: Composition-based stats. Identities = 15/92 (16%), Positives = 34/92 (36%), Gaps = 5/92 (5%) Query: 123 LLKPDL-TLFLSTQDV----DNNAEKSGFGDERYETVKFQEKVKQTFMKLLDKEIRKGDE 177 L +PD T++ D+ ++ + T+ F + Q + + ++ R + Sbjct: 67 LFEPDFETIYTQKPDLIVIGPRASKSYDELSKIAPTIVFAAEADQGYWESTQQQWRNLGK 126 Query: 178 SITIVDVTNKGIQEVEALIWQIVEPVLSTHID 209 I I++V+A I++ D Sbjct: 127 VFAIEPAVEAKIEQVDAQFKSIMQYNQQHKSD 158 >5LNK-k nrPDB Length = 320 Score = 38.6 bits (88), Expect = 0.002, Method: Composition-based stats. Identities = 33/175 (18%), Positives = 62/175 (35%), Gaps = 31/175 (17%) Query: 1 MMGRGKLILIEGLDRTGKTTQCNILYKKLQPNCKLLKFPERS-------TRIGGLIN--- 50 M KLI ++G +GK+ + +KL L FPE T G + Sbjct: 18 MTENSKLITVDGNICSGKSKLAKEVAEKLG----LKHFPEAGIHYADSTTGDGKPLPVRF 73 Query: 51 ------EYLTDDSFQLSDQAIHL---LFSANRWEIVDKIKKDLLEGKNIVMDRYVYSGVA 101 E DD + L L+++ + D ++ L G+ +V++R +YS Sbjct: 74 SGNCSLEKFYDDPKSNDGNSYRLQAWLYASRLLQYADALEHLLSTGQGVVLERSIYSDFV 133 Query: 102 YSAAKGTNGMDLDWCLQPDVGLLK--------PDLTLFLSTQDVDNNAEKSGFGD 148 + A G C+ + K P + +++ + + G+ Sbjct: 134 FLEAMYRQGFIRKQCVDHYNQVKKVTVCEYLPPHVVIYVDVPVSEVQSRIQKKGN 188 >3CM0-A nrPDB Length = 186 Score = 37.8 bits (86), Expect = 0.004, Method: Composition-based stats. Identities = 17/85 (20%), Positives = 34/85 (40%), Gaps = 9/85 (10%) Query: 2 MGRGKLILIEGLDRTGKTTQCNILYKKLQ----PNCKLLK-FPERSTRIGGLINEYLTDD 56 M G+ ++ G GK TQ + L ++L +L+ R T +G + + Sbjct: 1 MDVGQAVIFLGPPGAGKGTQASRLAQELGFKKLSTGDILRDHVARGTPLGERVRPIMERG 60 Query: 57 SFQLSDQAIHLLFSANRWEIVDKIK 81 D + L+ R E+ +++ Sbjct: 61 DLVPDDLILELI----REELAERVI 81 >3UMF-A nrPDB Length = 217 Score = 36.6 bits (83), Expect = 0.007, Method: Composition-based stats. Identities = 37/207 (17%), Positives = 77/207 (37%), Gaps = 27/207 (13%) Query: 2 MGRGKLILIEGLDRTGKTTQCNILYKKLQPNCKLLKFPERSTRIGGLINEYLTDDSFQLS 61 + + K+I + G +GK TQC L +K N + L + S Sbjct: 26 LAKAKVIFVLGGPGSGKGTQCEKLVQKFHFN-------------HLSSGDLLRAEVQSGS 72 Query: 62 DQAIHLLFSANRWEIV--DKIKKDLLEGKNIVMDR---YVYSGVAYSAAKGTNGMDLDWC 116 + L R E+V + + L E ++D+ ++ G +G + Sbjct: 73 PKGKELKAMMERGELVPLEVVLALLKEAMIKLVDKNCHFLIDGYPRELDQGIK---FEKE 129 Query: 117 LQPDVGLLKPDLTLFLSTQDVDNNAEKSGFGDERYETVKFQEKVKQTFMKLLDK--EIRK 174 + P + ++ D++ + + + AE S D+ ET+ K +TF +L E K Sbjct: 130 VCPCLCVINFDVSEEVMRKRLLKRAETSNRVDDNEETIV---KRFRTFNELTKPVIEHYK 186 Query: 175 GDESITIVDVTNKGIQEVEALIWQIVE 201 + +D + + + + ++ Sbjct: 187 QQNKVITIDASG-TVDAIFDKVNHELQ 212 >3SR0-A nrPDB Length = 206 Score = 35.5 bits (80), Expect = 0.017, Method: Composition-based stats. Identities = 28/145 (19%), Positives = 46/145 (31%), Gaps = 27/145 (18%) Query: 7 LILIEGLDRTGKTTQCNILYKKLQ----PNCKLLKFP-ERSTRIGGLINEYLTDDSFQLS 61 +++ G GK TQ L K+ +L+ ++ T +G EY+ Sbjct: 2 ILVFLGPPGAGKGTQAKRLAKEKGFVHISTGDILREAVQKGTPLGKKAKEYMERGELVPD 61 Query: 62 DQAIHLLFSANRWEIVDKIKKDLLEGKNIVMDRYVYSGVAYSAAKGTNGMDLDWCLQPDV 121 D I L I++ + N++ D + + LD L+ Sbjct: 62 DLIIAL------------IEEVFPKHGNVIFDGFPRTV--------KQAEALDEMLE--K 99 Query: 122 GLLKPDLTLFLSTQDVDNNAEKSGF 146 LK D L D SG Sbjct: 100 KGLKVDHVLLFEVPDEVVIERLSGR 124 >2A30-A nrPDB Length = 248 Score = 35.5 bits (80), Expect = 0.017, Method: Composition-based stats. Identities = 48/229 (20%), Positives = 86/229 (37%), Gaps = 30/229 (13%) Query: 4 RGKLILIEGLDRTGKTTQCNILYKKLQPNCKLLKFP------ERSTRIGGLINEYLTDDS 57 R K I IEG GK+T NIL K+L + +++ P +ST + ++ E S Sbjct: 23 RIKKISIEGNIAAGKSTFVNIL-KQLCEDWEVVPEPVARWCNVQSTNVLQMMYEKPERWS 81 Query: 58 FQLSDQAIHLLFSANRWEIVDKI----KKDLLEGKNIVMDRYVYSGVAYSAAKGTNGMDL 113 F A A + K+ K L +++ DRY+++ Y + Sbjct: 82 FTFQTYACLSRIRAQLASLNGKLKDAEKPVLFFERSVYSDRYIFASNLYESECMNETEWT 141 Query: 114 ------DWCLQPDVGLLKPDLTLFLSTQDVDNNAE--KSGFGDERYETVKFQEK------ 159 DW L+ D ++L G +E+ +++ EK Sbjct: 142 IYQDWHDWMNNQFGQSLELDGIIYLQATPETCLHRIYLRGRNEEQGIPLEYLEKLHYKHE 201 Query: 160 --VKQTFMKLLDKEIRKGDESITIVDVTNKGIQEVEALIWQIVEPVLST 206 + +K +++ I +DV + E+L+ + V+ LST Sbjct: 202 SWLLHRTLKTNFDYLQEVP--ILTLDVNEDFKDKYESLV-EKVKEFLST 247 >3L0S-A nrPDB Length = 223 Score = 35.5 bits (80), Expect = 0.019, Method: Composition-based stats. Identities = 15/65 (23%), Positives = 26/65 (40%), Gaps = 5/65 (7%) Query: 8 ILIEGLDRTGKTTQCNILYKK-----LQPNCKLLKFPERSTRIGGLINEYLTDDSFQLSD 62 ILI G + +GK TQ N++ K ++ + T +G E++ D Sbjct: 3 ILIFGPNGSGKGTQGNLVKDKYSLAHIESGGIFREHIGGGTELGKKAKEFIDRGDLVPDD 62 Query: 63 QAIHL 67 I + Sbjct: 63 ITIPM 67 >4F4J-A nrPDB Length = 202 Score = 35.1 bits (79), Expect = 0.020, Method: Composition-based stats. Identities = 36/199 (18%), Positives = 72/199 (36%), Gaps = 30/199 (15%) Query: 8 ILIEGLDRTGKTTQCNILYKKLQPNC-----KLLKFPERSTRIGGLINEYLTDDSFQL-- 60 I+I G TGK+T L+ + + + P G N D+ + Sbjct: 20 IVISGPSGTGKSTLLKKLFAEYPDSFGFSVPSTTRTPRAGEVNGKDYNFVSVDEFKSMIK 79 Query: 61 -SDQAIHLLFSANRWE-IVDKIKKDLLEGKNIVMDRYVYSGVAYSAAKGTNGMDLDWCLQ 118 ++ FS N + V +K+ GK ++D + K + L Sbjct: 80 NNEFIEWAQFSGNYYGSTVASVKQVSKSGKTCILD------IDMQGVKSVKAIP---ELN 130 Query: 119 PDVGLLKPDLTLFLSTQDVDNNAEK-SGFGDERYETVKFQEKVKQTFMKLLDKEIRKGDE 177 LF++ V++ ++ G G E E++ +++ +L E D+ Sbjct: 131 ARF--------LFIAPPSVEDLKKRLEGRGTETEESIN--KRLSAAQAELAYAETGAHDK 180 Query: 178 SITIVDVTNKGIQEVEALI 196 + + D +K +E++ I Sbjct: 181 -VIVNDDLDKAYKELKDFI 198 >3E70-C nrPDB Length = 328 Score = 34.0 bits (76), Expect = 0.048, Method: Composition-based stats. Identities = 26/140 (18%), Positives = 55/140 (39%), Gaps = 10/140 (7%) Query: 8 ILIEGLDRTGKTTQCNILYKKLQPNCKLLKFPERSTRIGGLINEYLTDDSFQLSDQAIHL 67 I+ G + +GKTT L L+ + + T G I E L + + ++ + I Sbjct: 132 IMFVGFNGSGKTTTIAKLANWLKNHGFSVVIAASDTFRAGAI-EQLEEHAKRIGVKVIKH 190 Query: 68 LFSANRWEIV-DKIKKDLLEGKNIVMDRYVYSGVAYSAAKGTNGMDLDWCLQPDVGLLKP 126 + A+ + D I+ G ++V+ + + A + +L ++ + KP Sbjct: 191 SYGADPAAVAYDAIQHAKARGIDVVL---IDT-----AGRSETNRNLMDEMKKIARVTKP 242 Query: 127 DLTLFLSTQDVDNNAEKSGF 146 +L +F+ N + Sbjct: 243 NLVIFVGDALAGNAIVEQAR 262 >6FRK-x nrPDB Length = 504 Score = 33.6 bits (75), Expect = 0.061, Method: Composition-based stats. Identities = 11/31 (35%), Positives = 16/31 (51%) Query: 3 GRGKLILIEGLDRTGKTTQCNILYKKLQPNC 33 G+ +I+ GL +GKTT C+ L Q Sbjct: 99 GKQNVIMFVGLQGSGKTTTCSKLAYYYQRKG 129 >3JAJ-z nrPDB Length = 426 Score = 33.6 bits (75), Expect = 0.068, Method: Composition-based stats. Identities = 11/31 (35%), Positives = 16/31 (51%) Query: 3 GRGKLILIEGLDRTGKTTQCNILYKKLQPNC 33 G+ +I+ GL +GKTT C+ L Q Sbjct: 96 GKQNVIMFVGLQGSGKTTTCSKLAYYYQRKG 126 >5L3Q-A nrPDB Length = 442 Score = 33.2 bits (74), Expect = 0.078, Method: Composition-based stats. Identities = 11/31 (35%), Positives = 16/31 (51%) Query: 3 GRGKLILIEGLDRTGKTTQCNILYKKLQPNC 33 G+ +I+ GL +GKTT C+ L Q Sbjct: 105 GKQNVIMFVGLQGSGKTTTCSKLAYYYQRKG 135 >1XMS-A nrPDB Length = 356 Score = 33.2 bits (74), Expect = 0.097, Method: Composition-based stats. Identities = 20/84 (23%), Positives = 34/84 (40%), Gaps = 9/84 (10%) Query: 5 GKLILIEGLDRTGKTTQCNILYKKLQPNCKLLKF--------PERSTRIGGLINEYLTDD 56 G+++ I G + +GKTT + Q K F P + ++G I+ L Sbjct: 63 GRIVEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPIYARKLGVDIDNLLCSQ 122 Query: 57 SFQLSDQAIHLLFSANRWEIVDKI 80 +QA+ + + R VD I Sbjct: 123 -PDTGEQALEICDALARSGAVDVI 145 >5OCH-A nrPDB Length = 612 Score = 33.2 bits (74), Expect = 0.099, Method: Composition-based stats. Identities = 22/115 (19%), Positives = 39/115 (33%), Gaps = 25/115 (21%) Query: 2 MGRGKLILIEGLDRTGKTTQCNILYKKLQPNCKLLKFPERSTRI---------------- 45 + GK++ + G GKTT ++L + P ++ R R Sbjct: 388 LPPGKIVALVGQSGGGKTTVASLLERFYDPTAGVVMLDGRDLRTLDPSWLRGQVVGFISQ 447 Query: 46 -----GGLINEYLTDDSFQLSDQAIHLLFSANRWEIVDKIKKDLLEGK-NIVMDR 94 G I E + + SD+ ++ A R + EG +V +R Sbjct: 448 EPVLFGTTIMENIRFGKLEASDEEVYT---AAREANAHEFITSFPEGYNTVVGER 499 >4YEG-A nrPDB Length = 275 Score = 32.8 bits (73), Expect = 0.11, Method: Composition-based stats. Identities = 16/91 (17%), Positives = 28/91 (30%), Gaps = 24/91 (26%) Query: 4 RGKLILIEGLDRTGKTTQCNILYKKLQPNCKLLKFPERSTRIGGLINEYLTDDSFQLSDQ 63 + LI+ EG D GK + + L P +I + + Sbjct: 58 KKVLIIFEGRDAAGKGGTIKRMMEHLNPRG------------AKVIALEKPSEQER---- 101 Query: 64 AIHLLFSANRWEIVDKIKKDLLEGKNIVMDR 94 N+W I+ G+ ++ DR Sbjct: 102 --------NQWYFQRYIEHLPSGGEIVLFDR 124 >4G1U-C nrPDB Length = 266 Score = 32.8 bits (73), Expect = 0.12, Method: Composition-based stats. Identities = 9/31 (29%), Positives = 17/31 (54%) Query: 2 MGRGKLILIEGLDRTGKTTQCNILYKKLQPN 32 + G+++ I G + GK+T +L L P+ Sbjct: 34 IASGEMVAIIGPNGAGKSTLLRLLTGYLSPS 64 >4CVN-A nrPDB Length = 191 Score = 32.8 bits (73), Expect = 0.13, Method: Composition-based stats. Identities = 38/206 (18%), Positives = 68/206 (33%), Gaps = 44/206 (21%) Query: 3 GRGKLILIEGLDRTGKTTQCNILYKKLQPNCKLLKFPERSTRIGGLINEYLTDDSFQLSD 62 G LI I G GKTT +L +KL L+ G ++ + + Sbjct: 9 AMGMLIAITGTPGVGKTTIAKLLAEKLGYEYVNLRDFALEKGCGREVDGEVEVEID---- 64 Query: 63 QAIHLLFSANRWEIVDKIKKDLLEGKNIVMDRYVYSGVAYSAAKGTNGMDLDWCLQPDVG 122 E+ ++K+L +N+V+D ++ Sbjct: 65 ------------ELAYFVEKELK-DRNVVLDGHL------------------------SH 87 Query: 123 LLKPDLTLFLSTQDVDNNAEKSGFGDERYETVKFQEKVKQTFMKLLDKEIRKGDESITIV 182 L+ DL + L G Y K E V+ + + E E++ V Sbjct: 88 LMPVDLVVVLRAHPRIIGERLRERG---YSKEKIGENVEAELVDAILIEAIDEHENVIEV 144 Query: 183 DVTNKGIQEVEALIWQIVEPVLSTHI 208 D TNK +E+ I +++ + + Sbjct: 145 DTTNKTPEEIVEEIIGLIKSGVKRRV 170 >1TEV-A nrPDB Length = 196 Score = 32.4 bits (72), Expect = 0.14, Method: Composition-based stats. Identities = 39/216 (18%), Positives = 75/216 (34%), Gaps = 39/216 (18%) Query: 2 MGRGKLILIEGLDRTGKTTQCNILYKKLQ----PNCKLLK--FPERSTRIGGLINEYLTD 55 M + ++ G GK TQC + +K +LL+ ++ G LI +Y+ + Sbjct: 1 MKPLVVFVLGGP-GAGKGTQCARIVEKYGYTHLSAGELLRDERKNPDSQYGELIEKYIKE 59 Query: 56 DSFQLSDQAIHLLFSANRWEIVDKIKKDLLEGKNIVMDRYVYSGVAYSAAKGTNGMDLDW 115 + I LL + E+ + + + K ++ W Sbjct: 60 GKIVPVEITISLL----KREMDQTMAANAQKNKFLI-----------DGFPRNQDNLQGW 104 Query: 116 CLQPDVGLLKPDLTLFL--------STQDVDNNAEKSGFGDERYETVKFQEKVKQTFMKL 167 D K D++ L + + SG D+ + EK QT+++ Sbjct: 105 NKTMDG---KADVSFVLFFDCNNEICIERCLERGKSSGRSDD---NRESLEKRIQTYLQS 158 Query: 168 LDKEIRKGDE--SITIVDVTNKGIQEVEALIWQIVE 201 I +E + +D + K + EV + QI + Sbjct: 159 TKPIIDLYEEMGKVKKIDAS-KSVDEVFDEVVQIFD 193 >5CB6-A nrPDB Length = 197 Score = 32.4 bits (72), Expect = 0.14, Method: Composition-based stats. Identities = 15/37 (40%), Positives = 20/37 (54%) Query: 1 MMGRGKLILIEGLDRTGKTTQCNILYKKLQPNCKLLK 37 M RG I + GL GKTT + L KKL+ + L+ Sbjct: 21 MQQRGVTIWLTGLSGAGKTTITHALEKKLRDSGYRLE 57 >2BWJ-A nrPDB Length = 199 Score = 32.4 bits (72), Expect = 0.15, Method: Composition-based stats. Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 9/57 (15%) Query: 2 MGRGKLILIEGLDRTGKTTQCNILYKKLQPNCKLLKFPERSTRIGGLINEYLTDDSF 58 + + K+I I G +GK TQC L +K F ST G L+ E L +S Sbjct: 9 LRKCKIIFIIGGPGSGKGTQCEKLVEKYG-------FTHLST--GELLREELASESE 56 >3TR0-A nrPDB Length = 205 Score = 32.4 bits (72), Expect = 0.16, Method: Composition-based stats. Identities = 30/205 (14%), Positives = 67/205 (32%), Gaps = 34/205 (16%) Query: 2 MGRGKLILIEGLDRTGKTTQCNILYKKLQPNCKLLKFPERSTRIGG-------LINEYLT 54 M + L +I GKT+ L K L + R R G I+E Sbjct: 4 MNKANLFIISAPSGAGKTSLVRALVKALAEIKISISHTTRPKRPGDQEGVDYFFIDETRF 63 Query: 55 DDSFQLSDQAIHLLFSANRWEIVDK-IKKDLLEGKNIVMDRYVYSGVAYSAAKGTNGMDL 113 + H + + + L G++++++ + + A+ Sbjct: 64 QAMVKEGAFLEHATIYERHYGTEKDWVLRQLKAGRDVLLE------IDWQGARQIRE--- 114 Query: 114 DWCLQPDVGLLKPDLTLFLSTQDVDNNAEKSGFGDERYETVKFQEKVKQTFMKLLDKEIR 173 L P L++F+ ++ A + R + + + + L +E+ Sbjct: 115 ---------LFPPALSIFILPPSIE--ALRERLIKRRQDDTA----IIEQRLALAREEMA 159 Query: 174 KGDE--SITIVDVTNKGIQEVEALI 196 E + + D ++ +Q + +I Sbjct: 160 HYKEFDYLVVNDNFDQAVQNLIHII 184 >5L3R-A nrPDB Length = 301 Score = 32.0 bits (71), Expect = 0.20, Method: Composition-based stats. Identities = 12/27 (44%), Positives = 14/27 (51%) Query: 8 ILIEGLDRTGKTTQCNILYKKLQPNCK 34 IL+ GL GKTT C L L+ K Sbjct: 109 ILLAGLQGVGKTTVCAKLACYLKKQGK 135 >3UIE-A nrPDB Length = 200 Score = 32.0 bits (71), Expect = 0.21, Method: Composition-based stats. Identities = 17/64 (26%), Positives = 29/64 (45%), Gaps = 4/64 (6%) Query: 4 RGKLILIEGLDRTGKTTQCNILYKKLQPNCKLLKFPERSTRIGGLINEYLTDDSFQLSDQ 63 +G +I + GL +GK+T L + L KL + GL + SF+ D+ Sbjct: 24 KGCVIWVTGLSGSGKSTLACALNQMLYQKGKLCYILDGDNVRHGLNRDL----SFKAEDR 79 Query: 64 AIHL 67 A ++ Sbjct: 80 AENI 83 >3A4L-A nrPDB Length = 260 Score = 31.6 bits (70), Expect = 0.22, Method: Composition-based stats. Identities = 33/185 (17%), Positives = 59/185 (31%), Gaps = 29/185 (15%) Query: 2 MGRGKLILIEGLDRTGKTTQCNILYKKLQPNCKLLKFPERSTRIGGLINEYLTDDSFQLS 61 MG LI++ GL GK+T L K L N + LI E + Sbjct: 1 MGDIMLIILTGLPGVGKSTFSKNLAKILSKNNIDVIVLGS-----DLIRESFPVWKEKYE 55 Query: 62 DQAIHLLFSANRWEIVDKIKKDLLEGKNIVMDRYVYSGVAYSAAKGTNGMDLDWCLQPDV 121 + + I L +++D + S + + + + Sbjct: 56 EFIKKSTY--------RLIDSALKN-YWVIVD---DTNYYNSMRRDLINIAKKYNKNYAI 103 Query: 122 GLLKPDLTLFLSTQDVDNNAEKSGFGDERYETVKFQEKVKQTFMKLLDKEIRKGDESITI 181 LK L + + ++ E+ + +K+ + F + K K DE I Sbjct: 104 IYLKASLDVLI---------RRNIERGEKIPN-EVIKKMYEKFDEPGKKY--KWDEPFLI 151 Query: 182 VDVTN 186 +D T Sbjct: 152 IDTTK 156 >4YER-A nrPDB Length = 328 Score = 31.6 bits (70), Expect = 0.24, Method: Composition-based stats. Identities = 17/75 (22%), Positives = 32/75 (42%), Gaps = 10/75 (13%) Query: 2 MGRGKLILIEGLDRTGKTTQCNILYKKLQPNC--------KLLKFPERSTRIGGLI--NE 51 + +G++ G + GKTT ++L L+P +LK P R G++ ++ Sbjct: 28 VKKGEIFAFLGPNGAGKTTTIHMLTTLLKPTSGKAWVAGHDVLKEPREVRRKIGIVFQDQ 87 Query: 52 YLTDDSFQLSDQAIH 66 L + + IH Sbjct: 88 SLDRELTAYENMYIH 102 >4BZX-A nrPDB Length = 173 Score = 31.6 bits (70), Expect = 0.25, Method: Composition-based stats. Identities = 15/64 (23%), Positives = 28/64 (43%), Gaps = 4/64 (6%) Query: 4 RGKLILIEGLDRTGKTTQCNILYKKLQPNCKLLKFPERSTRIGGLINEYLTDDSFQLSDQ 63 RGK + GL +GK++ ++ +KL + GL + F ++D+ Sbjct: 3 RGKTVWFTGLSGSGKSSVAMLVERKLLEKGISAYVLDGDNLRHGLNADL----GFSMADR 58 Query: 64 AIHL 67 A +L Sbjct: 59 AENL 62 >2FEM-A nrPDB Length = 227 Score = 31.6 bits (70), Expect = 0.28, Method: Composition-based stats. Identities = 10/30 (33%), Positives = 14/30 (46%) Query: 1 MMGRGKLILIEGLDRTGKTTQCNILYKKLQ 30 M +I I+G GK T C + + LQ Sbjct: 1 MTAIAPVITIDGPSGAGKGTLCKAMAEALQ 30 >2BBW-A nrPDB Length = 246 Score = 31.3 bits (69), Expect = 0.30, Method: Composition-based stats. Identities = 15/75 (20%), Positives = 27/75 (36%), Gaps = 5/75 (6%) Query: 1 MMGRGKLILIEGLDRTGKTTQCNILY-----KKLQPNCKLLKFPERSTRIGGLINEYLTD 55 M + +I G +GK T C + + L L + + ST +G + +Y+ Sbjct: 23 MASKLLRAVILGPPGSGKGTVCQRIAQNFGLQHLSSGHFLRENIKASTEVGEMAKQYIEK 82 Query: 56 DSFQLSDQAIHLLFS 70 L+ S Sbjct: 83 SLLVPDHVITRLMMS 97 >2V3C-C nrPDB Length = 432 Score = 31.3 bits (69), Expect = 0.35, Method: Composition-based stats. Identities = 9/31 (29%), Positives = 16/31 (51%) Query: 3 GRGKLILIEGLDRTGKTTQCNILYKKLQPNC 33 + +IL+ G+ +GKTT L + +Q Sbjct: 97 KKQNVILLVGIQGSGKTTTAAKLARYIQKRG 127 >1X6V-B nrPDB Length = 630 Score = 31.3 bits (69), Expect = 0.37, Method: Composition-based stats. Identities = 37/208 (17%), Positives = 69/208 (33%), Gaps = 27/208 (12%) Query: 4 RGKLILIEGLDRTGKTTQCNILYKKLQPNCKLLKFPERSTRIGGLINEYLTDDSFQLSDQ 63 RG + + GL GKTT L + L + T G I + L + + S + Sbjct: 51 RGCTVWLTGLSGAGKTTVSMALEEYLVCHG-----IPCYTLDGDNIRQGL-NKNLGFSPE 104 Query: 64 AIHLLFSANRWEIVDKIKKDLLEGKNIVMDRYVYSG-VAYSAAKGTNGMDLDWCLQPDVG 122 +R E V +I + V + +G V ++ D + Q G Sbjct: 105 --------DREENVRRIAE--------VAKLFADAGLVCITSFISPYTQDRNNARQIHEG 148 Query: 123 LLKPDLTLFLSTQ--DVDNNAEKSGFGDERYETVKFQEKVKQTFMKLLDKEIRKGDESIT 180 P +F+ + K + R +K + + K E+ +S Sbjct: 149 ASLPFFEVFVDAPLHVCEQRDVKGLYKKARAGEIKGFTGIDSEYEKPEAPELVLKTDSCD 208 Query: 181 IVDVTNKGIQEVEALIWQIVEPVLSTHI 208 + D + ++ ++ IV S + Sbjct: 209 VNDCVQQVVELLQE--RDIVPVDASYEV 234 >5L3R-B nrPDB Length = 293 Score = 30.9 bits (68), Expect = 0.39, Method: Composition-based stats. Identities = 15/97 (15%), Positives = 36/97 (37%), Gaps = 12/97 (12%) Query: 4 RGKLILIEGLDRTGKTTQCNILYKKLQPNCKLLKFPERSTRIGGLINEYLTDDSFQLSDQ 63 + +I+I G++ GKTT L +L+ + G +D +++ Sbjct: 90 KPAVIMIVGVNGGGKTTSLGKLAHRLKNEGTKV-----LMAAGDTFRAAASDQLEIWAER 144 Query: 64 A--IHLLFSANRWEIVDKIKKDLLEGK-----NIVMD 93 ++ ++ + + K + GK ++ D Sbjct: 145 TGCEIVVAEGDKAKAATVLSKAVKRGKEEGYDVVLCD 181 >2OG2-A nrPDB Length = 359 Score = 30.9 bits (68), Expect = 0.39, Method: Composition-based stats. Identities = 15/97 (15%), Positives = 36/97 (37%), Gaps = 12/97 (12%) Query: 4 RGKLILIEGLDRTGKTTQCNILYKKLQPNCKLLKFPERSTRIGGLINEYLTDDSFQLSDQ 63 + +I+I G++ GKTT L +L+ + G +D +++ Sbjct: 156 KPAVIMIVGVNGGGKTTSLGKLAHRLKNEGTKV-----LMAAGDTFRAAASDQLEIWAER 210 Query: 64 A--IHLLFSANRWEIVDKIKKDLLEGK-----NIVMD 93 ++ ++ + + K + GK ++ D Sbjct: 211 TGCEIVVAEGDKAKAATVLSKAVKRGKEEGYDVVLCD 247 >6BT9-A nrPDB Length = 672 Score = 30.9 bits (68), Expect = 0.43, Method: Composition-based stats. Identities = 27/113 (23%), Positives = 44/113 (38%), Gaps = 7/113 (6%) Query: 95 YVYSGVAYSAAKGTNGMDLDWCLQPDV----GLLKPD--LTLFLSTQDVDNNAEKSGFGD 148 + S VA+ A G +G+DLDW G +P+ L QDV N K+G D Sbjct: 186 FAESTVAFLRAYGFDGVDLDWEYPGVETIPGGSYRPEDKQNFTLLLQDVRNALNKAGAED 245 Query: 149 ERYETVKFQEKVKQTFMKLLD-KEIRKGDESITIVDVTNKGIQEVEALIWQIV 200 + + Q + + K+I + + I I+ G E + + Sbjct: 246 GKQYLLTIASGASQRYADHTELKKISQILDWINIMTYDFHGGWEATSNHNAAL 298 >4WIA-A nrPDB Length = 233 Score = 30.9 bits (68), Expect = 0.45, Method: Composition-based stats. Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 1/42 (2%) Query: 5 GKLILIEGLDRTGKTTQCNIL-YKKLQPNCKLLKFPERSTRI 45 G LI+IEG + TGK+ C L Y LQ + + T + Sbjct: 27 GSLIIIEGEESTGKSVLCQRLAYGFLQNRYSVTYVSTQLTTL 68 >2J41-A nrPDB Length = 207 Score = 30.9 bits (68), Expect = 0.47, Method: Composition-based stats. Identities = 30/222 (13%), Positives = 69/222 (31%), Gaps = 39/222 (17%) Query: 4 RGKLILIEGLDRTGKTTQCNILYK----KLQPNCKLLKFPERSTRIGGLINEYLTDDSFQ 59 +G LI++ G GK T +++ + + + R + G+ + T D+F+ Sbjct: 5 KGLLIVLSGPSGVGKGTVRKRIFEDPSTSYKYSISMTTRQMREGEVDGVDYFFKTRDAFE 64 Query: 60 LSDQAIHLLFSANRWEI-----VDKIKKDLLEGKNIVMDRYVYSGVAYSAAKGTNGMDLD 114 + + A V +K + EG ++ ++ + AK Sbjct: 65 ALIKDDQFIEYAEYVGNYYGTPVQYVKDTMDEGHDVFLE------IEVEGAKQVRKK--- 115 Query: 115 WCLQPDVGLLKPDLTLFLSTQDVDNNAEKSGFGDERYETVKFQEKVKQT----------- 163 PD + + G K Q ++ + Sbjct: 116 ----------FPDALFIFLAPPSLEHLRERLVGRGTESDEKIQSRINEARKEVEMMNLYD 165 Query: 164 FMKLLDKEIRKGDESITIVDVTNKGIQEVEALIWQIVEPVLS 205 ++ + D+ + IV+ + + VEA +++ Sbjct: 166 YVVVNDEVELAKNRIQCIVEAEHLKRERVEAKYRKMILEAKK 207 >2JAQ-A nrPDB Length = 205 Score = 30.9 bits (68), Expect = 0.48, Method: Composition-based stats. Identities = 38/209 (18%), Positives = 80/209 (38%), Gaps = 30/209 (14%) Query: 8 ILIEGLDRTGKTTQCNILYKKLQPNCKLLKFPERSTRIGGLINEYLTDDSFQLSDQAIHL 67 I I G GK+T + KKL ++ K P + L F++ I++ Sbjct: 3 IAIFGTVGAGKSTISAEISKKLG--YEIFKEPVEENPYFEQYYKDLKKTVFKMQ---IYM 57 Query: 68 LFSANRWEIVDKIKKDLLEGKNIVMDRY-----VYSGVAYSAA---KGTNGMDLDWCLQP 119 L + ++ K +NI+ DR ++ V Y + +D+ Sbjct: 58 LTARSKQ------LKQAKNLENIIFDRTLLEDPIFMKVNYDLNNVDQTDYNTYIDFYNNV 111 Query: 120 DVGLLK-P------DLTLFL--STQDVDNNAEKSGFGDERYETVKFQEKVKQTFMKLLDK 170 + LK P D+ ++L ST+ + +K G +E ++ E + + + + + Sbjct: 112 VLENLKIPENKLSFDIVIYLRVSTKTAISRIKKRGRSEELLIGEEYWETLNKNYEEFYKQ 171 Query: 171 EIRKGDESITIVDVTNKGIQEVEALIWQI 199 + D +VD ++E ++ ++ Sbjct: 172 NV--YDFPFFVVDAELDVKTQIELIMNKL 198 >1UBG-A nrPDB Length = 349 Score = 30.5 bits (67), Expect = 0.50, Method: Composition-based stats. Identities = 19/85 (22%), Positives = 30/85 (35%), Gaps = 6/85 (7%) Query: 2 MGRGKLILIEGLDRTGKTTQCNILYKKLQPNCKLLKFPERSTRIGGLINEYLTDDSFQLS 61 + RG++I I G + +GKTT Q + F + L EY Sbjct: 58 LPRGRVIEIYGPESSGKTTVALHAVANAQAAGGIAAFIDAE---HALDPEYAKKLGV--- 111 Query: 62 DQAIHLLFSANRWEIVDKIKKDLLE 86 D L+ + E +I L+ Sbjct: 112 DTDSLLVSQPDTGEQALEIADMLVR 136 >4E22-A nrPDB Length = 252 Score = 30.5 bits (67), Expect = 0.53, Method: Composition-based stats. Identities = 9/29 (31%), Positives = 13/29 (44%) Query: 1 MMGRGKLILIEGLDRTGKTTQCNILYKKL 29 M +I ++G GK T C L + L Sbjct: 23 MTAIAPVITVDGPSGAGKGTLCKALAESL 51 >2YVU-A nrPDB Length = 186 Score = 30.5 bits (67), Expect = 0.55, Method: Composition-based stats. Identities = 17/92 (18%), Positives = 35/92 (38%), Gaps = 12/92 (13%) Query: 2 MGRGKLILIEGLDRTGKTTQCNILYKKLQPNCKLLKFPERSTRIGGLINEYLTDDSFQLS 61 + +G ++ + GL +GKTT L LQ ++ + ++E F Sbjct: 10 IEKGIVVWLTGLPGSGKTTIATRLADLLQKEGYRVEVLD-GDWARTTVSE---GAGFTRE 65 Query: 62 DQAIHLLFSANRWEIVDKIKKDLLE-GKNIVM 92 ++ HL + + I + L G ++ Sbjct: 66 ERLRHL-------KRIAWIARLLARNGVIVIC 90 >1M7G-A nrPDB Length = 211 Score = 30.5 bits (67), Expect = 0.55, Method: Composition-based stats. Identities = 31/200 (15%), Positives = 68/200 (34%), Gaps = 30/200 (15%) Query: 4 RGKLILIEGLDRTGKTTQCNILYKKLQPNCKLLKFPERSTRIGGLINEYLTDDSFQLSDQ 63 RG I + GL +GK+T L +L + ++ + I +N+ L Sbjct: 24 RGLTIWLTGLSASGKSTLAVELEHQLVRDRRVHAYRLDGDNIRFGLNK-------DLGFS 76 Query: 64 AIHLLFSANRWEIVDKIKKDLLEGKNIVMDRYVYS-GVAYSAAKGTNGMDLDWCLQP--- 119 A+R E + +I + V + S +A ++ D D Q Sbjct: 77 E------ADRNENIRRIAE--------VAKLFADSNSIAITSFISPYRKDRDTARQLHEV 122 Query: 120 -----DVGLLKPDLTLFLSTQDVDNNAEKSGFGDERYETVKFQEKVKQTFMKLLDKEIRK 174 + GL ++ + + + + K + R +K + + + E+ Sbjct: 123 ATPGEETGLPFVEVYVDVPVEVAEQRDPKGLYKKAREGVIKEFTGISAPYEAPANPEVHV 182 Query: 175 GDESITIVDVTNKGIQEVEA 194 + + + D + I ++ Sbjct: 183 KNYELPVQDAVKQIIDYLDT 202 >3PFI-A nrPDB Length = 338 Score = 30.5 bits (67), Expect = 0.58, Method: Composition-based stats. Identities = 12/32 (37%), Positives = 15/32 (46%) Query: 8 ILIEGLDRTGKTTQCNILYKKLQPNCKLLKFP 39 IL G GKTT NI+ ++ N K P Sbjct: 58 ILFSGPAGLGKTTLANIISYEMSANIKTTAAP 89 >3CUH-A nrPDB Length = 315 Score = 30.5 bits (67), Expect = 0.60, Method: Composition-based stats. Identities = 14/71 (19%), Positives = 30/71 (42%), Gaps = 2/71 (2%) Query: 147 GDERYETVKFQEKVKQTFMKLLDKEIRKGDES--ITIVDVTNKGIQEVEALIWQIVEPVL 204 G R + FQ+K+ +++ + R D + + I D +GI ++ +V+ Sbjct: 132 GGGRRQDSAFQQKLGNGYIETAFRAARAADPTAKLCINDYNVEGINAKSNSLYDLVKDFK 191 Query: 205 STHIDHDKFSF 215 + + D F Sbjct: 192 ARGVPLDCVGF 202 >1MO5-A nrPDB Length = 350 Score = 30.5 bits (67), Expect = 0.60, Method: Composition-based stats. Identities = 20/95 (21%), Positives = 34/95 (35%), Gaps = 9/95 (9%) Query: 2 MGRGKLILIEGLDRTGKTTQCNILYKKLQPNCKLLKFPERSTRIGGLINEYLTDDSFQLS 61 + RG++I I G + +GKTT Q + F + L +Y Sbjct: 57 LPRGRVIEIYGPESSGKTTVALHAVANAQAAGGVAAFIDAE---HALDPDYAKKLGV--- 110 Query: 62 DQAIHLLFSANRWEIVDKIKKDLLEG---KNIVMD 93 D L+ + E +I L+ +V+D Sbjct: 111 DTDSLLVSQPDTGEQALEIADMLIRSGALDIVVID 145 >5JRJ-A nrPDB Length = 351 Score = 30.1 bits (66), Expect = 0.66, Method: Composition-based stats. Identities = 20/87 (22%), Positives = 37/87 (42%), Gaps = 9/87 (10%) Query: 2 MGRGKLILIEGLDRTGKTTQCNILYKKLQPNCKLLKFPE--------RSTRIGGLINEYL 53 + RG++I I G + +GKTT ++Q F + + ++G +N+ L Sbjct: 63 LPRGRVIEIYGPESSGKTTLTLQSIAEMQKLGGTCAFIDAEHALDVTYAQKLGVNLNDLL 122 Query: 54 TDDSFQLSDQAIHLLFSANRWEIVDKI 80 +QA+ + + R VD I Sbjct: 123 ISQ-PDTGEQALEICDALVRSGAVDLI 148 >3ADK-A nrPDB Length = 195 Score = 30.1 bits (66), Expect = 0.66, Method: Composition-based stats. Identities = 14/72 (19%), Positives = 29/72 (40%), Gaps = 5/72 (6%) Query: 2 MGRGKLILIEGLDRTGKTTQCNILYKK-----LQPNCKLLKFPERSTRIGGLINEYLTDD 56 + + K+I + G +GK TQC + +K L L + G +++E + Sbjct: 6 LKKSKIIFVVGGPGSGKGTQCEKIVQKYGYTHLSTGDLLRAEVSSGSARGKMLSEIMEKG 65 Query: 57 SFQLSDQAIHLL 68 + + +L Sbjct: 66 QLVPLETVLDML 77 >3CR7-A nrPDB Length = 197 Score = 30.1 bits (66), Expect = 0.71, Method: Composition-based stats. Identities = 31/200 (15%), Positives = 68/200 (34%), Gaps = 30/200 (15%) Query: 4 RGKLILIEGLDRTGKTTQCNILYKKLQPNCKLLKFPERSTRIGGLINEYLTDDSFQLSDQ 63 RG I + GL +GK+T L +L + ++ + I +N+ L Sbjct: 2 RGLTIWLTGLSASGKSTLAVELEHQLVRDRRVHAYRLDGDNIRFGLNK-------DLGFS 54 Query: 64 AIHLLFSANRWEIVDKIKKDLLEGKNIVMDRYVYS-GVAYSAAKGTNGMDLDWCLQP--- 119 A+R E + +I + V + S +A ++ D D Q Sbjct: 55 E------ADRNENIRRIAE--------VAKLFADSNSIAITSFISPYRKDRDTARQLHEV 100 Query: 120 -----DVGLLKPDLTLFLSTQDVDNNAEKSGFGDERYETVKFQEKVKQTFMKLLDKEIRK 174 + GL ++ + + + + K + R +K + + + E+ Sbjct: 101 ATPGEETGLPFVEVYVDVPVEVAEQRDPKGLYKKAREGVIKEFTGISAPYEAPANPEVHV 160 Query: 175 GDESITIVDVTNKGIQEVEA 194 + + + D + I ++ Sbjct: 161 KNYELPVQDAVKQIIDYLDT 180 >2PEY-A nrPDB Length = 179 Score = 30.1 bits (66), Expect = 0.73, Method: Composition-based stats. Identities = 10/26 (38%), Positives = 13/26 (50%) Query: 4 RGKLILIEGLDRTGKTTQCNILYKKL 29 RG + + GL GKTT L + L Sbjct: 4 RGCTVWLTGLSGAGKTTVSMALEEYL 29 >2OFX-A nrPDB Length = 207 Score = 30.1 bits (66), Expect = 0.73, Method: Composition-based stats. Identities = 10/26 (38%), Positives = 13/26 (50%) Query: 4 RGKLILIEGLDRTGKTTQCNILYKKL 29 RG + + GL GKTT L + L Sbjct: 31 RGCTVWLTGLSGAGKTTVSMALEEYL 56 >6G2J-O nrPDB Length = 355 Score = 30.1 bits (66), Expect = 0.75, Method: Composition-based stats. Identities = 27/193 (13%), Positives = 70/193 (36%), Gaps = 29/193 (15%) Query: 5 GKLILIEGLDRTGKTTQCNILYKKLQPNCKL---LKFPERSTRIGGLIN---------EY 52 ++I ++G +GK + ++L +++ +T G ++ E Sbjct: 57 SRVITVDGNICSGKNKLAKEIAQQLGMKHYPEAGIQYSSTTTGDGRPLDIEFSGSCSLEK 116 Query: 53 LTDDSFQLSDQAIHL---LFSANRWEIVDKIKKDLLEGKNIVMDRYVYSGVAY------S 103 DD + L L+++ + D ++ L G+ +V++R +YS + Sbjct: 117 FYDDPKSNDGNSYRLQSWLYASRLLQYADALEHLLSTGQGVVLERSIYSDFVFLEAMYNQ 176 Query: 104 AAKGTNGMD-LDWCLQPDVGL-LKPDLTLFLSTQDVDNNAEKSGFGDERYETVKFQEKVK 161 +D + + + L P +++ + + GD + KV Sbjct: 177 GYIRKQCVDHYNEIKRLTLPEYLPPHAVIYIDVPVPEVQSRIQKKGDPH------EMKVT 230 Query: 162 QTFMKLLDKEIRK 174 +++ ++ +K Sbjct: 231 SAYLQDIENAYKK 243 >6QUZ-B nrPDB Length = 599 Score = 29.7 bits (65), Expect = 0.85, Method: Composition-based stats. Identities = 23/141 (16%), Positives = 46/141 (32%), Gaps = 27/141 (19%) Query: 2 MGRGKLILIEGLDRTGKTTQCNILYKKL----------QPNCKLLKFPERSTRIGGLI-- 49 + G+ + + G +GKTT N+L + + + +K + IG ++ Sbjct: 378 IKPGQKVALVGPTGSGKTTIVNLLMRFYDVDRGQILVDGIDIRKIKRSSLRSSIGIVLQD 437 Query: 50 --------NEYLTDDSFQLSDQAIHLLFSANRWEIVDKIKKDLLEGK-NIVMDRYVYSGV 100 E L + +D+ I A + D K L EG ++ D Sbjct: 438 TILFSTTVKENLKYGNPGATDEEIK---EAAKLTHSDHFIKHLPEGYETVLTDNGEDLS- 493 Query: 101 AYSAAKGTNGMDLDWCLQPDV 121 + + + P + Sbjct: 494 --QGQRQLLAITRAFLANPKI 512 >1G6H-A nrPDB Length = 257 Score = 29.7 bits (65), Expect = 0.90, Method: Composition-based stats. Identities = 10/38 (26%), Positives = 21/38 (55%) Query: 4 RGKLILIEGLDRTGKTTQCNILYKKLQPNCKLLKFPER 41 +G + LI G + +GK+T N++ L+ + + F + Sbjct: 32 KGDVTLIIGPNGSGKSTLINVITGFLKADEGRVYFENK 69 >3P4T-A nrPDB Length = 403 Score = 29.7 bits (65), Expect = 0.91, Method: Composition-based stats. Identities = 8/33 (24%), Positives = 15/33 (45%) Query: 91 VMDRYVYSGVAYSAAKGTNGMDLDWCLQPDVGL 123 V +R + AY+ A+ + ++WC D Sbjct: 261 VAERVGLATQAYAGAQRCLDLTVEWCRNRDTFG 293 >1LVG-A nrPDB Length = 198 Score = 29.7 bits (65), Expect = 0.91, Method: Composition-based stats. Identities = 15/80 (18%), Positives = 26/80 (32%), Gaps = 10/80 (12%) Query: 2 MGRGKLILIEGLDRTGKTTQCNILYKKLQ-----PNCKLLKFPERSTRIGG----LINEY 52 M + +++ G GK+T L+++ + P G + E Sbjct: 1 MAGPRPVVLSGPSGAGKSTLLKKLFQEHSSIFGFSVSHTTRNPRPGEEDGKDYYFVTREM 60 Query: 53 LTDDSFQLSDQAIHLLFSAN 72 + D D H FS N Sbjct: 61 MQRD-IAAGDFIEHAEFSGN 79 >1RZ3-A nrPDB Length = 201 Score = 29.7 bits (65), Expect = 1.1, Method: Composition-based stats. Identities = 14/30 (46%), Positives = 20/30 (66%), Gaps = 1/30 (3%) Query: 5 GKLIL-IEGLDRTGKTTQCNILYKKLQPNC 33 G+L+L I+GL R+GKTT N L + L+ Sbjct: 21 GRLVLGIDGLSRSGKTTLANQLSQTLREQG 50 >4FIN-A nrPDB Length = 555 Score = 29.7 bits (65), Expect = 1.1, Method: Composition-based stats. Identities = 16/83 (19%), Positives = 30/83 (36%), Gaps = 10/83 (12%) Query: 4 RGKLILIEGLDRTGKTTQCNILYKKLQPNCKLLKFPERSTRIGGLINEYLTDDSFQLSDQ 63 G I + GL+ GK+T I+ + + + P+ +IG L E + + + Sbjct: 31 PGAKIGVLGLNGAGKSTLLRIMA-GIDKDIEGEARPQPDIKIGYLPQEPQLNPEHTVRES 89 Query: 64 AIHLLFSANRWEIVDKIKKDLLE 86 E V ++ L Sbjct: 90 IE---------EAVSEVVNALKR 103 >3C8U-A nrPDB Length = 208 Score = 29.7 bits (65), Expect = 1.1, Method: Composition-based stats. Identities = 8/28 (28%), Positives = 13/28 (46%) Query: 6 KLILIEGLDRTGKTTQCNILYKKLQPNC 33 +L+ + G +GK+T N L L Sbjct: 23 QLVALSGAPGSGKSTLSNPLAAALSAQG 50 >2F3T-A nrPDB Length = 207 Score = 29.3 bits (64), Expect = 1.1, Method: Composition-based stats. Identities = 28/192 (14%), Positives = 62/192 (32%), Gaps = 31/192 (16%) Query: 2 MGRGKLILIEGLDRTGKTTQCNILYKK--LQPNCKLLKFPERSTRIGGLINEYL----TD 55 M +G L ++ GK++ L K L + R R G + E+ D Sbjct: 1 MAQGTLYIVSAPSGAGKSSLIQALLKTQPLYDTQVSVSHTTRQPRPGEVHGEHYFFVNHD 60 Query: 56 DSFQLSDQ---AIHLLFSANRWEIVDK-IKKDLLEGKNIVMDRYVYSGVAYSAAKGTNGM 111 + ++ + H N + + I++ L G ++ +D + + A+ Sbjct: 61 EFKEMISRDAFLEHAEVFGNYYGTSREAIEQVLATGVDVFLD------IDWQGAQQIR-- 112 Query: 112 DLDWCLQPDVGLLKPDLTLFLSTQDVDNNAEKSGFGDERYETVKFQEKVKQTFMKLLDKE 171 + L ++ + G G + E + +++ Q ++ Sbjct: 113 ---------QKMPHARSIFILPPSKIELDRRLRGRGQDSEEVIA--KRMAQAVAEM--SH 159 Query: 172 IRKGDESITIVD 183 + D I D Sbjct: 160 YAEYDYLIVNDD 171 >5EE5-B nrPDB Length = 171 Score = 29.3 bits (64), Expect = 1.2, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 24/59 (40%), Gaps = 4/59 (6%) Query: 2 MGRGKLILIEGLDRTGKTTQCNILYKKLQPNCKLLKFPERSTRIGGLINEYLTDDSFQL 60 M R ILI GLD GKTT + +LQ + P + + + L + L Sbjct: 4 MTREMRILILGLDGAGKTT----ILYRLQVGEVVTTIPTIGFNVETVTYKNLKFQVWDL 58 >4RY2-A nrPDB Length = 730 Score = 29.3 bits (64), Expect = 1.3, Method: Composition-based stats. Identities = 10/28 (35%), Positives = 14/28 (50%) Query: 4 RGKLILIEGLDRTGKTTQCNILYKKLQP 31 +GK + I G +GKTT +L P Sbjct: 514 KGKTVAIVGESGSGKTTLAKLLMNFYSP 541 >1SGW-A nrPDB Length = 214 Score = 29.3 bits (64), Expect = 1.3, Method: Composition-based stats. Identities = 11/49 (22%), Positives = 23/49 (46%), Gaps = 1/49 (2%) Query: 2 MGRGKLILIEGLDRTGKTTQCNILYKKLQP-NCKLLKFPERSTRIGGLI 49 + +G ++ G + GKTT + L+P +++ T++ G I Sbjct: 32 IEKGNVVNFHGPNGIGKTTLLKTISTYLKPLKGEIIYNGVPITKVKGKI 80 >4Q7L-A nrPDB Length = 256 Score = 29.3 bits (64), Expect = 1.4, Method: Composition-based stats. Identities = 23/141 (16%), Positives = 46/141 (32%), Gaps = 27/141 (19%) Query: 2 MGRGKLILIEGLDRTGKTTQCNILYKKL----------QPNCKLLKFPERSTRIGGLI-- 49 + G+ + + G +GKTT N+L + + + +K + IG ++ Sbjct: 28 IKPGQKVALVGPTGSGKTTIVNLLMRFYDVDRGQILVDGIDIRKIKRSSLRSSIGIVLQD 87 Query: 50 --------NEYLTDDSFQLSDQAIHLLFSANRWEIVDKIKKDLLEGK-NIVMDRYVYSGV 100 E L + +D+ I A + D K L EG ++ D Sbjct: 88 TILFSTTVKENLKYGNPGATDEEIK---EAAKLTHSDHFIKHLPEGYETVLTDNGEDLS- 143 Query: 101 AYSAAKGTNGMDLDWCLQPDV 121 + + + P + Sbjct: 144 --QGQRQLLAITRAFLANPKI 162 >5X6J-A nrPDB Length = 217 Score = 29.3 bits (64), Expect = 1.4, Method: Composition-based stats. Identities = 8/21 (38%), Positives = 13/21 (61%) Query: 8 ILIEGLDRTGKTTQCNILYKK 28 I++ GL GK TQ + + +K Sbjct: 3 IVLMGLPGAGKGTQADRIVEK 23 >6QUZ-A nrPDB Length = 587 Score = 28.9 bits (63), Expect = 1.6, Method: Composition-based stats. Identities = 20/113 (17%), Positives = 38/113 (33%), Gaps = 23/113 (20%) Query: 2 MGRGKLILIEGLDRTGKTTQCNILYKKLQP--------------------NCKLLKFPER 41 + G L+ + G +GK+T N++ + + P + P+ Sbjct: 366 VKPGSLVAVLGETGSGKSTLMNLIPRLIDPERGRVEVDELDVRTVKLKDLRGHISAVPQE 425 Query: 42 STRIGGLINEYLTDDSFQLSDQAIHLLFSANRWEIVDKIKKDLLEGKNIVMDR 94 + G I E L +D I A + + L EG + ++R Sbjct: 426 TVLFSGTIKENLKWGREDATDDEI---VEAAKIAQIHDFIISLPEGYDSRVER 475 >3TLX-A nrPDB Length = 243 Score = 28.9 bits (63), Expect = 1.6, Method: Composition-based stats. Identities = 27/149 (18%), Positives = 43/149 (28%), Gaps = 27/149 (18%) Query: 5 GKLILIEGLDRTGKTTQCNIL-----YKKLQPNCKLLKFPERSTRIGGLINEYLTDDSFQ 59 G+ I G +GK TQ L Y L L + E+ T +G I + ++ Sbjct: 30 GRYI-FLGAPGSGKGTQSLNLKKSHCYCHLSTGDLLREAAEKKTELGLKIKNII-NEGKL 87 Query: 60 LSDQAIHLLFSANRWEIVDKIK-KDLLEGKNIVMDRYVYSGVAYSAAKGTNGMDLDWCLQ 118 + DQ + L +K+K +G + D Sbjct: 88 VDDQMVLSLVD-------EKLKTPQCKKGFIL------------DGYPRNVKQAEDLNKL 128 Query: 119 PDVGLLKPDLTLFLSTQDVDNNAEKSGFG 147 K D + + D SG Sbjct: 129 LQKNQTKLDGVFYFNVPDEVLVNRISGRL 157 >1ZAK-A nrPDB Length = 222 Score = 28.9 bits (63), Expect = 1.6, Method: Composition-based stats. Identities = 37/231 (16%), Positives = 81/231 (35%), Gaps = 54/231 (23%) Query: 8 ILIEGLDRTGKTTQCNILYKKLQ----PNCKLLK-FPERSTRIGGLINEYLTDDSFQLSD 62 ++I G +GK TQC ++ K Q LL+ + G E++ + Sbjct: 8 VMISGAPASGKGTQCELIKTKYQLAHISAGDLLRAEIAAGSENGKRAKEFMEKGQLVPDE 67 Query: 63 QAIHLLFSANRWEIVDKIKKDLLEGKNIVMDRYVYSGVAYSAAKGTNGMDLDWCLQPDVG 122 ++++ R + D E ++D Y S YS A +++ Sbjct: 68 IVVNMVKERLR-------QPDAQENGW-LLDGYPRS---YSQAMALETLEI--------- 107 Query: 123 LLKPDLTLFLSTQDV-------------------------DNNAEKSGFGDERYETVKFQ 157 +PD + L D N E + +R++ + + Sbjct: 108 --RPDTFILLDVPDELLVERVVGRRLDPVTGKIYHLKYSPPENEEIASRLTQRFDDTEEK 165 Query: 158 EKVK-QTFMKLLDKEIRKGDESITIVDVTNKGIQEVEALIWQIVEPVLSTH 207 K++ +T+ + ++ + E+I + + + V A I +++ +L Sbjct: 166 VKLRLETYYQNIESLLSTY-ENIIVKVQGDATVDAVFAKIDELLGSILEKK 215 >3J15-B nrPDB Length = 593 Score = 28.9 bits (63), Expect = 1.7, Method: Composition-based stats. Identities = 13/32 (40%), Positives = 19/32 (59%) Query: 1 MMGRGKLILIEGLDRTGKTTQCNILYKKLQPN 32 ++ G ++ I G + TGKTT IL +L PN Sbjct: 99 IVKDGMVVGIVGPNGTGKTTAVKILAGQLIPN 130 >1P4S-A nrPDB Length = 181 Score = 28.9 bits (63), Expect = 1.7, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 26/67 (38%), Gaps = 5/67 (7%) Query: 8 ILIEGLDRTGKTTQCNILYKKLQ----PNCKLLKF-PERSTRIGGLINEYLTDDSFQLSD 62 +L+ G GK TQ L +KL +L + E T++G YL SD Sbjct: 3 VLLLGPPGAGKGTQAVKLAEKLGIPQISTGELFRRNIEEGTKLGVEAKRYLDAGDLVPSD 62 Query: 63 QAIHLLF 69 L+ Sbjct: 63 LTNELVD 69 >3DM5-A nrPDB Length = 443 Score = 28.9 bits (63), Expect = 1.8, Method: Composition-based stats. Identities = 7/23 (30%), Positives = 10/23 (43%) Query: 12 GLDRTGKTTQCNILYKKLQPNCK 34 G+ +GKTT L + Q Sbjct: 107 GIQGSGKTTTVAKLARYFQKRGY 129 >5GPN-q nrPDB Length = 357 Score = 28.9 bits (63), Expect = 1.9, Method: Composition-based stats. Identities = 32/217 (14%), Positives = 81/217 (37%), Gaps = 22/217 (10%) Query: 5 GKLILIEGLDRTGKTTQCNILYKKLQPNC---KLLKFPERSTRIGGLINEYLTD------ 55 K+I ++G +GK + +KL + + + +T G ++ L+ Sbjct: 59 SKVITVDGNICSGKGRLAREIAEKLGLRHFPEAGIHYADSTTGDGKPLDVQLSGNCSLEK 118 Query: 56 --DSFQLSD----QAIHLLFSANRWEIVDKIKKDLLEGKNIVMDRYVYSGVAYSAAKGTN 109 D + +D + L+++ + D ++ L G+ +V++R +YS + A Sbjct: 119 FYDDPKSNDGNSYRLQSWLYASRLLQYADALEHLLSTGQGVVLERSIYSDFVFLEAMYRQ 178 Query: 110 GMDLDWCLQPDVGLLKPDLTLFLSTQDVDNNAEKSGFGDERYETV--KFQEKVKQTFMKL 167 G C++ + K +L V R + + K+ +++ Sbjct: 179 GFIRKQCVEHYNEVKKVTACEYLPPHVVVYVDVPVPEIQSRIQKKGNPHEMKITAAYLQD 238 Query: 168 LDKEIRKG-----DESITIVDVTNKGIQEVEALIWQI 199 ++ +K E ++ + + ++ E ++ I Sbjct: 239 IENAYKKTFLPEMSEKCEVLQYSAREAEDAEKVVEDI 275 >4MKG-A nrPDB Length = 217 Score = 28.9 bits (63), Expect = 1.9, Method: Composition-based stats. Identities = 8/21 (38%), Positives = 12/21 (57%) Query: 8 ILIEGLDRTGKTTQCNILYKK 28 I++ GL GK TQ + +K Sbjct: 3 IVLMGLPGAGKGTQAERIVEK 23 >4WZ6-A nrPDB Length = 290 Score = 28.9 bits (63), Expect = 1.9, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 22/40 (55%) Query: 2 MGRGKLILIEGLDRTGKTTQCNILYKKLQPNCKLLKFPER 41 + RG+L+ + G GKT+ ++ +L+P+ +K R Sbjct: 61 IERGQLLAVAGSTGAGKTSLLMMIMGELEPSEGKIKHSGR 100 >2PZF-A nrPDB Length = 228 Score = 28.6 bits (62), Expect = 1.9, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 22/40 (55%) Query: 2 MGRGKLILIEGLDRTGKTTQCNILYKKLQPNCKLLKFPER 41 + RG+L+ + G GKT+ ++ +L+P+ +K R Sbjct: 31 IERGQLLAVAGSTGAGKTSLLMMIMGELEPSEGKIKHSGR 70 >3CR8-A nrPDB Length = 552 Score = 28.6 bits (62), Expect = 1.9, Method: Composition-based stats. Identities = 8/26 (30%), Positives = 12/26 (46%) Query: 4 RGKLILIEGLDRTGKTTQCNILYKKL 29 +G + GL GK+T L +L Sbjct: 368 QGFTVFFTGLSGAGKSTLARALAARL 393 >2R6F-A nrPDB Length = 972 Score = 28.6 bits (62), Expect = 1.9, Method: Composition-based stats. Identities = 10/29 (34%), Positives = 16/29 (55%), Gaps = 1/29 (3%) Query: 5 GKLILIEGLDRTGKTTQCN-ILYKKLQPN 32 G + + G+ +GK+T N +LYK L Sbjct: 650 GTFVAVTGVSGSGKSTLVNEVLYKALAQK 678 Score = 28.6 bits (62), Expect = 2.3, Method: Composition-based stats. Identities = 8/19 (42%), Positives = 14/19 (73%) Query: 4 RGKLILIEGLDRTGKTTQC 22 RGKL+++ GL +GK++ Sbjct: 43 RGKLVVLTGLSGSGKSSLA 61 >2IXE-A nrPDB Length = 271 Score = 28.6 bits (62), Expect = 1.9, Method: Composition-based stats. Identities = 9/30 (30%), Positives = 15/30 (50%) Query: 4 RGKLILIEGLDRTGKTTQCNILYKKLQPNC 33 GK+ + G + +GK+T +L QP Sbjct: 44 PGKVTALVGPNGSGKSTVAALLQNLYQPTG 73 >2IW3-A nrPDB Length = 986 Score = 28.6 bits (62), Expect = 1.9, Method: Composition-based stats. Identities = 8/34 (23%), Positives = 16/34 (47%), Gaps = 1/34 (2%) Query: 8 ILIEGLDRTGKTTQCNILY-KKLQPNCKLLKFPE 40 I + G + GK+T N+L + L + ++ Sbjct: 702 IAVIGPNGAGKSTLINVLTGELLPTSGEVYTHEN 735 >3SI7-A nrPDB Length = 285 Score = 28.6 bits (62), Expect = 2.0, Method: Composition-based stats. Identities = 9/40 (22%), Positives = 23/40 (57%) Query: 2 MGRGKLILIEGLDRTGKTTQCNILYKKLQPNCKLLKFPER 41 + +G+++ I G +GKT+ ++ +L+ + ++K R Sbjct: 61 IEKGEMLAITGSTGSGKTSLLMLILGELEASEGIIKHSGR 100 >3VX4-A nrPDB Length = 273 Score = 28.6 bits (62), Expect = 2.0, Method: Composition-based stats. Identities = 8/36 (22%), Positives = 19/36 (52%) Query: 2 MGRGKLILIEGLDRTGKTTQCNILYKKLQPNCKLLK 37 + +G + + G +GKTT ++ +PN +++ Sbjct: 58 IKKGSKVSLVGASGSGKTTLAKLIVNFYEPNKGIVR 93 >5LJ6-A nrPDB Length = 664 Score = 28.6 bits (62), Expect = 2.0, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 23/68 (33%), Gaps = 6/68 (8%) Query: 2 MGRGKLILIEGLDRTGKTTQCNILYKKLQPNCKLLKFPERSTRIGGLINEYLTDDSFQLS 61 + RG + I G +GK+T NI+ C S G E D L Sbjct: 50 IERGDFVAIMGQSGSGKSTLMNII------GCLDTATGGSSKIDGKETIELTNDQLSDLR 103 Query: 62 DQAIHLLF 69 Q +F Sbjct: 104 SQKFGFIF 111 >3UX8-A nrPDB Length = 670 Score = 28.6 bits (62), Expect = 2.1, Method: Composition-based stats. Identities = 10/29 (34%), Positives = 16/29 (55%), Gaps = 1/29 (3%) Query: 5 GKLILIEGLDRTGKTTQCN-ILYKKLQPN 32 G + + G+ +GK+T N +LYK L Sbjct: 348 GTFVAVTGVSGSGKSTLVNEVLYKALAQK 376 Score = 28.6 bits (62), Expect = 2.4, Method: Composition-based stats. Identities = 8/19 (42%), Positives = 14/19 (73%) Query: 4 RGKLILIEGLDRTGKTTQC 22 RGKL+++ GL +GK++ Sbjct: 43 RGKLVVLTGLSGSGKSSLA 61 >4Q1A-A nrPDB Length = 280 Score = 28.6 bits (62), Expect = 2.3, Method: Composition-based stats. Identities = 47/244 (19%), Positives = 83/244 (34%), Gaps = 45/244 (18%) Query: 4 RGKLILIEGLDRTGKTTQCNILYKKLQPNCKLLKFPERSTRIGGLIN---EYLTDDSFQL 60 R K I IEG GK+T NIL K+L + +++ P E LT + Sbjct: 40 RIKKISIEGNIAAGKSTFVNIL-KQLSEDWEVVPEPVARWSNVQSTQDEFEELTMEQKNG 98 Query: 61 SDQAIHLLFSANRWEI-------VDKIKKDLL--EGKN-------------IVMDRYVYS 98 + + RW + +I+ L GK + DRY+++ Sbjct: 99 GNVLQMMYEKPERWSFTFQTYACLSRIRAQLASLNGKLKDAEKPVLFFERSVYSDRYIFA 158 Query: 99 GVAYSAAKGTNGMDL------DWCLQPDVGLLKPDLTLFLSTQDVDNNAE--KSGFGDER 150 Y + DW L+ D ++L G +E+ Sbjct: 159 SNLYESESMNETEWTIYQDWHDWMNNQFGQSLELDGIIYLQATPETCLHRIYLRGRNEEQ 218 Query: 151 YETVKFQEK--------VKQTFMKLLDKEIRKGDESITIVDVTNKGIQEVEALIWQIVEP 202 +++ EK + +K +++ I +DV + E+L+ + V+ Sbjct: 219 GIPLEYLEKLHYKHESWLLHRTLKTNFDYLQEVP--ILTLDVNEDFKDKYESLV-EKVKE 275 Query: 203 VLST 206 LST Sbjct: 276 FLST 279 >5YV5-A nrPDB Length = 536 Score = 28.6 bits (62), Expect = 2.3, Method: Composition-based stats. Identities = 12/32 (37%), Positives = 19/32 (59%) Query: 1 MMGRGKLILIEGLDRTGKTTQCNILYKKLQPN 32 ++ G ++ I G + TGK+T IL +L PN Sbjct: 41 VVKEGMVVGIVGPNGTGKSTAVKILAGQLIPN 72 >1VIA-A nrPDB Length = 175 Score = 28.6 bits (62), Expect = 2.3, Method: Composition-based stats. Identities = 10/28 (35%), Positives = 13/28 (46%) Query: 2 MGRGKLILIEGLDRTGKTTQCNILYKKL 29 M K I+ G +GK+T L K L Sbjct: 1 MSLAKNIVFIGFMGSGKSTLARALAKDL 28 >4RVC-A nrPDB Length = 245 Score = 28.6 bits (62), Expect = 2.4, Method: Composition-based stats. Identities = 8/29 (27%), Positives = 17/29 (58%) Query: 4 RGKLILIEGLDRTGKTTQCNILYKKLQPN 32 RG+++ + GL+ GK+T + ++P Sbjct: 28 RGEMVALIGLNGAGKSTTIKHIIGLMEPR 56 >5L3S-B nrPDB Length = 296 Score = 28.6 bits (62), Expect = 2.4, Method: Composition-based stats. Identities = 27/140 (19%), Positives = 51/140 (36%), Gaps = 10/140 (7%) Query: 8 ILIEGLDRTGKTTQCNILYKKLQPNCKLLKFPERSTRIGGLINEYLTDDSFQLSDQAIHL 67 I+ G++ GKTT + L+ N L S E L + +L Q I Sbjct: 104 IIFFGVNGVGKTTTIAKVVNMLKKN-NLSTIIAASDTFRAAAQEQLAYHASKLEVQLIRG 162 Query: 68 LFSANRWEIV-DKIKKDLLEGKNIVMDRYVYSGVAYSAAKGTNGMDLDWCLQPDVGLLKP 126 + A+ + D I ++V+ + + A + DL L+ + + KP Sbjct: 163 KYGADPASVAFDAISFAKSRNIDVVL---IDT-----AGRMHIDSDLVEELKKVLRIAKP 214 Query: 127 DLTLFLSTQDVDNNAEKSGF 146 D + + ++A + Sbjct: 215 DFRILILDSLAGSDALEQAR 234 >3PV0-A nrPDB Length = 381 Score = 28.6 bits (62), Expect = 2.5, Method: Composition-based stats. Identities = 23/195 (11%), Positives = 63/195 (32%), Gaps = 25/195 (12%) Query: 5 GKLILIEGLDRTGKTTQCNILY--KKLQPN------CKLLKFPERSTRIGGLINEYLTDD 56 G+ ++ G GK+T ++ + + ++ P +G + Y Sbjct: 29 GEFVVFVGPSGCGKSTLLRMIAGLETITSGDLFIGEKRMNDTPPAERGVGMVFQSYALYP 88 Query: 57 SFQL-SDQAIHLLFSANRWEIVDKIKKDLLEGKNI--VMDRYVYSGVAYSAAKGTNGMDL 113 + + + L + + E++++ + E + ++DR A S + Sbjct: 89 HLSVAENMSFGLKLAGAKKEVINQRVNQVAEVLQLAHLLDR---KPKALSGGQRQRVAIG 145 Query: 114 DWCLQPDVGLLKPDLTLFLSTQDVDNNAEKSGFGDERYETVKFQEKVKQT--FMKLLDKE 171 + L +N + + R E + +++ +T ++ E Sbjct: 146 RTLVAEPS-------VFLLDEP--LSNLDAALRVQMRIEISRLHKRLGRTMIYVTHDQVE 196 Query: 172 IRKGDESITIVDVTN 186 + I ++D Sbjct: 197 AMTLADKIVVLDAGR 211 >4Q7K-A nrPDB Length = 250 Score = 28.2 bits (61), Expect = 2.5, Method: Composition-based stats. Identities = 20/113 (17%), Positives = 38/113 (33%), Gaps = 23/113 (20%) Query: 2 MGRGKLILIEGLDRTGKTTQCNILYKKLQP--------------------NCKLLKFPER 41 + G L+ + G +GK+T N++ + + P + P+ Sbjct: 28 VKPGSLVAVLGETGSGKSTLMNLIPRLIDPERGRVEVDELDVRTVKLKDLRGHISAVPQE 87 Query: 42 STRIGGLINEYLTDDSFQLSDQAIHLLFSANRWEIVDKIKKDLLEGKNIVMDR 94 + G I E L +D I A + + L EG + ++R Sbjct: 88 TVLFSGTIKENLKWGREDATDDEI---VEAAKIAQIHDFIISLPEGYDSRVER 137 >3TAU-A nrPDB Length = 208 Score = 28.2 bits (61), Expect = 2.5, Method: Composition-based stats. Identities = 10/27 (37%), Positives = 14/27 (51%) Query: 1 MMGRGKLILIEGLDRTGKTTQCNILYK 27 M RG LI++ G GK T ++K Sbjct: 4 MTERGLLIVLSGPSGVGKGTVREAVFK 30 >3LNC-A nrPDB Length = 231 Score = 28.2 bits (61), Expect = 2.6, Method: Composition-based stats. Identities = 13/45 (28%), Positives = 21/45 (46%), Gaps = 1/45 (2%) Query: 5 GKLILIEGLDRTGKTTQCNILYKKLQPN-CKLLKFPERSTRIGGL 48 G ++++ GKTT N L +K + N K + R+ R G Sbjct: 27 GVILVLSSPSGCGKTTVANKLLEKQKNNIVKSVSVTTRAARKGEK 71 >3ZQJ-A nrPDB Length = 993 Score = 28.2 bits (61), Expect = 2.8, Method: Composition-based stats. Identities = 7/21 (33%), Positives = 12/21 (57%) Query: 2 MGRGKLILIEGLDRTGKTTQC 22 + R LI+ GL +GK++ Sbjct: 43 LPRDALIVFTGLSGSGKSSLA 63 Score = 27.8 bits (60), Expect = 4.2, Method: Composition-based stats. Identities = 22/96 (22%), Positives = 35/96 (36%), Gaps = 17/96 (17%) Query: 5 GKLILIEGLDRTGKTTQCN-ILYKKLQPNCKLLKF-PERSTRIGGL--INEYLTDDSFQL 60 G L + G+ +GK+T N IL L + P R TR+ GL +++ + D + Sbjct: 668 GVLTSVTGVSGSGKSTLVNDILAAVLANRLNGARQVPGRHTRVTGLDYLDKLVRVDQSPI 727 Query: 61 S-------------DQAIHLLFSANRWEIVDKIKKD 83 I LF+A V + Sbjct: 728 GRTPRSNPATYTGVFDKIRTLFAATTEAKVRGYQPG 763 >4MRS-A nrPDB Length = 614 Score = 28.2 bits (61), Expect = 2.9, Method: Composition-based stats. Identities = 7/27 (25%), Positives = 13/27 (48%) Query: 2 MGRGKLILIEGLDRTGKTTQCNILYKK 28 + G + I G GK+T +L++ Sbjct: 384 VAAGSRVAIVGPSGAGKSTIARLLFRF 410 >2FGK-A nrPDB Length = 247 Score = 28.2 bits (61), Expect = 2.9, Method: Composition-based stats. Identities = 9/36 (25%), Positives = 21/36 (58%), Gaps = 1/36 (2%) Query: 2 MGRGKLILIEGLDRTGKTTQCNILYK-KLQPNCKLL 36 + +G++I I G +GK+T ++ + + N ++L Sbjct: 32 IKQGEVIGIVGRSGSGKSTLTKLIQRFYIPENGQVL 67 >1Z83-A nrPDB Length = 196 Score = 28.2 bits (61), Expect = 2.9, Method: Composition-based stats. Identities = 36/198 (18%), Positives = 71/198 (35%), Gaps = 36/198 (18%) Query: 2 MGRGKLILIEGLDRTGKTTQCNILYKK-----LQPNCKLLKFPERSTRIGGLINEYLTDD 56 + + +I + G +GK TQC + +K L L + G ++E + Sbjct: 6 LKKTNIIFVVGGPGSGKGTQCEKIVQKYGYTHLSTGDLLRSEVSSGSARGKKLSEIMEKG 65 Query: 57 SFQLSDQAIHLLFSANRWEIVDKIKKDLLEGKNIVMDRYVYSGVAYSAAKGTNGMDLDWC 116 + + +L R +V K+ +G I ++ Sbjct: 66 QLVPLETVLDML----RDAMVAKVNT--SKGFLI----------------DGYPREVQQG 103 Query: 117 LQPDVGLLKPDLTLFLS------TQDVDNNAEKSGFGDERYETVKFQEKVKQTFMKLLDK 170 + + + +P L L++ TQ + E SG D+ ET+K K +T+ K + Sbjct: 104 EEFERRIGQPTLLLYVDAGPETMTQRLLKRGETSGRVDDNEETIK---KRLETYYKATEP 160 Query: 171 EIRKGDESITIVDVTNKG 188 I ++ + V +G Sbjct: 161 VIAFYEKRGIVRKVNAEG 178 >5G3Y-A nrPDB Length = 226 Score = 28.2 bits (61), Expect = 3.0, Method: Composition-based stats. Identities = 20/140 (14%), Positives = 41/140 (29%), Gaps = 24/140 (17%) Query: 12 GLDRTGKTTQCNILYKK-----LQPNCKLLKFPERSTRIGGLINEYLTDDSFQLSDQAIH 66 G GK TQ + ++ + + T +G EY+ + I Sbjct: 7 GPPGAGKGTQAEKIVEEYGIPHISTGDMFRAAIKEGTELGLKAKEYMDKGELVPDEVTIG 66 Query: 67 LLFSANRWEIVDKIKKDLLEGKNIVMDRYVYSGVAYSAAKGTNGMDLDWCLQPDVGLLKP 126 L+ + D +G ++D + + LD L+ +K Sbjct: 67 LVKE-------RLSQPDCKKGF--LLDGFPRTV--------AQAEALDKILKEL--GIKL 107 Query: 127 DLTLFLSTQDVDNNAEKSGF 146 D + + + +G Sbjct: 108 DAVINIEVPREELLERLTGR 127 >3R20-A nrPDB Length = 233 Score = 28.2 bits (61), Expect = 3.0, Method: Composition-based stats. Identities = 7/33 (21%), Positives = 15/33 (45%) Query: 1 MMGRGKLILIEGLDRTGKTTQCNILYKKLQPNC 33 M+ ++ ++G TGK++ L + L Sbjct: 5 MVSGSLVVAVDGPAGTGKSSVSRGLARALGARY 37 >4XGU-A nrPDB Length = 424 Score = 28.2 bits (61), Expect = 3.1, Method: Composition-based stats. Identities = 11/25 (44%), Positives = 15/25 (60%) Query: 6 KLILIEGLDRTGKTTQCNILYKKLQ 30 +LIL+ G TGKT+ C L + L Sbjct: 173 RLILLTGPPGTGKTSLCKGLAQHLS 197 >5JSZ-B nrPDB Length = 287 Score = 28.2 bits (61), Expect = 3.2, Method: Composition-based stats. Identities = 9/30 (30%), Positives = 14/30 (46%) Query: 2 MGRGKLILIEGLDRTGKTTQCNILYKKLQP 31 + GK I + G +GK+T L+P Sbjct: 30 LEEGKFIALVGHTGSGKSTLMQHFNALLKP 59 >2AX4-A nrPDB Length = 198 Score = 27.8 bits (60), Expect = 3.3, Method: Composition-based stats. Identities = 10/26 (38%), Positives = 13/26 (50%) Query: 4 RGKLILIEGLDRTGKTTQCNILYKKL 29 RG + + GL GKTT L + L Sbjct: 21 RGCTVWLTGLSGAGKTTISFALEEYL 46 >4JYC-A nrPDB Length = 337 Score = 27.8 bits (60), Expect = 3.4, Method: Composition-based stats. Identities = 21/88 (23%), Positives = 30/88 (34%), Gaps = 16/88 (18%) Query: 3 GRGKLILIEGLDRTGKTTQCNILYKKLQP---NCKLLKFPERSTRIGGLINEYLTDDSFQ 59 GR + I G+ GK+T + L L +L STR GG I Sbjct: 53 GRAIRVGITGVPGVGKSTTIDALGSLLTAAGHKVAVLAVDPSSTRTGGSI---------- 102 Query: 60 LSDQAIHLLFSANRWEIVDKIKKDLLEG 87 L D+ + +R I+ G Sbjct: 103 LGDKTRMARLAIDRNAF---IRPSPSSG 127 >3R8C-A nrPDB Length = 228 Score = 27.8 bits (60), Expect = 3.4, Method: Composition-based stats. Identities = 8/32 (25%), Positives = 18/32 (56%), Gaps = 1/32 (3%) Query: 3 GRGKLIL-IEGLDRTGKTTQCNILYKKLQPNC 33 G G +++ ++G TGK++ L ++L + Sbjct: 1 GPGSMVVAVDGPSGTGKSSVAKELARQLGASY 32 >2PCL-A nrPDB Length = 224 Score = 27.8 bits (60), Expect = 3.4, Method: Composition-based stats. Identities = 18/88 (20%), Positives = 29/88 (32%), Gaps = 3/88 (3%) Query: 2 MGRGKLILIEGLDRTGKTTQCNIL-YKKLQPNCKLLKFPERSTRIGGLINEYLTDDSFQL 60 + +G+ + I G +GK+T IL K+ + L + Sbjct: 27 VKKGEFVSIIGASGSGKSTLLYILGLLDAPTEGKVFLEGKEVDYTNEKELSLLRNRKLGF 86 Query: 61 SDQAIHLLFSANRWEIVDKIKKDLLEGK 88 Q +L+ E V I L GK Sbjct: 87 VFQFHYLIPELTALENV--IVPMLKMGK 112 >5U1D-B nrPDB Length = 686 Score = 27.8 bits (60), Expect = 3.5, Method: Composition-based stats. Identities = 8/32 (25%), Positives = 16/32 (50%) Query: 2 MGRGKLILIEGLDRTGKTTQCNILYKKLQPNC 33 + G++ + G + +GK+T +L QP Sbjct: 493 LRPGEVTALVGPNGSGKSTVAALLQNLYQPTG 524 >5U1D-A nrPDB Length = 748 Score = 27.8 bits (60), Expect = 3.5, Method: Composition-based stats. Identities = 8/32 (25%), Positives = 16/32 (50%) Query: 2 MGRGKLILIEGLDRTGKTTQCNILYKKLQPNC 33 + G++ + G + +GK+T +L QP Sbjct: 528 LRPGEVTALVGPNGSGKSTVAALLQNLYQPTG 559 >1JJ7-A nrPDB Length = 260 Score = 27.8 bits (60), Expect = 3.6, Method: Composition-based stats. Identities = 8/32 (25%), Positives = 16/32 (50%) Query: 2 MGRGKLILIEGLDRTGKTTQCNILYKKLQPNC 33 + G++ + G + +GK+T +L QP Sbjct: 40 LRPGEVTALVGPNGSGKSTVAALLQNLYQPTG 71 >5L3S-A nrPDB Length = 298 Score = 27.8 bits (60), Expect = 3.6, Method: Composition-based stats. Identities = 7/28 (25%), Positives = 13/28 (46%) Query: 7 LILIEGLDRTGKTTQCNILYKKLQPNCK 34 +I++ G+ +GKTT L + Sbjct: 104 IIMLVGVQGSGKTTTAGKLAYFYKKRGY 131 >1S4Q-A nrPDB Length = 228 Score = 27.8 bits (60), Expect = 3.6, Method: Composition-based stats. Identities = 9/44 (20%), Positives = 21/44 (47%) Query: 5 GKLILIEGLDRTGKTTQCNILYKKLQPNCKLLKFPERSTRIGGL 48 G+++++ G GK+T L +++ + R+ R G + Sbjct: 23 GRVVVLSGPSAVGKSTVVRCLRERIPNLHFSVSATTRAPRPGEV 66 >2UVQ-A nrPDB Length = 245 Score = 27.8 bits (60), Expect = 3.8, Method: Composition-based stats. Identities = 10/29 (34%), Positives = 15/29 (51%) Query: 4 RGKLILIEGLDRTGKTTQCNILYKKLQPN 32 R LI + G +GK+T C + + L N Sbjct: 24 RPFLIGVSGGTASGKSTVCEKIMELLGQN 52 >1QZX-A nrPDB Length = 440 Score = 27.8 bits (60), Expect = 3.9, Method: Composition-based stats. Identities = 7/28 (25%), Positives = 13/28 (46%) Query: 7 LILIEGLDRTGKTTQCNILYKKLQPNCK 34 +I++ G+ +GKTT L + Sbjct: 106 IIMLVGVQGSGKTTTAGKLAYFYKKRGY 133 >4RDY-A nrPDB Length = 316 Score = 27.8 bits (60), Expect = 3.9, Method: Composition-based stats. Identities = 20/97 (20%), Positives = 30/97 (30%), Gaps = 19/97 (19%) Query: 77 VDKIKKDLLEGKNIVMDRYVYSGV---------AYSAAKGT----------NGMDLDWCL 117 + I++ L EG I +DR+ A K +DW Sbjct: 208 ISFIEQILREGAFIGLDRFGLDIYLPLDKRVKTAIELIKRGWIDQLLLSHDYCPTIDWYP 267 Query: 118 QPDVGLLKPDLTLFLSTQDVDNNAEKSGFGDERYETV 154 V PD T+ L + V G +E+ V Sbjct: 268 PEVVRSTVPDWTMTLIFEKVIPRMRSEGITEEQINRV 304 >6HA8-V nrPDB Length = 548 Score = 27.8 bits (60), Expect = 4.0, Method: Composition-based stats. Identities = 17/84 (20%), Positives = 32/84 (38%), Gaps = 14/84 (16%) Query: 5 GKLILIEGLDRTGKTTQCNI----------LYKKLQPNCKLLKFPERSTRIGGLINEYLT 54 G+ + I G + +GKTT NI ++ N L + E Sbjct: 323 GEKVAIIGPNGSGKTTLLNIILGQETAEGSVWVSPSANIGYLTQEVFDLPLEQTPEELFE 382 Query: 55 DDSFQLSDQAIHLL----FSANRW 74 +++F+ +L+ F+A +W Sbjct: 383 NETFKARGHVQNLMRHLGFTAAQW 406 >5WV8-A nrPDB Length = 482 Score = 27.8 bits (60), Expect = 4.2, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 22/50 (44%), Gaps = 1/50 (2%) Query: 95 YVYSGVAYSAAKGTNGMDLDWCLQPDVGLLKPDLTLFLSTQDVDNNAEKS 144 ++YS + Y + +G+D+DW P G K + L L AE Sbjct: 196 FIYSAIPYLRDRNFDGLDIDWLY-PKGGDDKKNYVLLLKELREAFEAEAQ 244 >3GTU-B nrPDB Length = 224 Score = 27.8 bits (60), Expect = 4.2, Method: Composition-based stats. Identities = 12/72 (16%), Positives = 28/72 (38%), Gaps = 4/72 (5%) Query: 13 LDRTGKTTQCNILYKKLQPNCKLLKFPERSTRIGGLINEYLTDDSFQLSDQAIHLLFSAN 72 LD K TQ N + + + + T + + + + Q I L +S++ Sbjct: 67 LDGKNKITQSNAILRYIARKHNMC----GETEEEKIRVDIIENQVMDFRTQLIRLCYSSD 122 Query: 73 RWEIVDKIKKDL 84 ++ + ++L Sbjct: 123 HEKLKPQYLEEL 134 >3HXT-A nrPDB Length = 203 Score = 27.8 bits (60), Expect = 4.2, Method: Composition-based stats. Identities = 16/108 (14%), Positives = 38/108 (35%) Query: 19 TTQCNILYKKLQPNCKLLKFPERSTRIGGLINEYLTDDSFQLSDQAIHLLFSANRWEIVD 78 ++ L +L+ + + ER + L + + +Q S + L + E + Sbjct: 7 SSAKRSLRGELKQRLRAMSAEERLRQSRVLSQKVIAHSEYQKSKRISIFLSMQDEIETEE 66 Query: 79 KIKKDLLEGKNIVMDRYVYSGVAYSAAKGTNGMDLDWCLQPDVGLLKP 126 IK GK + RY + + + ++ + + +P Sbjct: 67 IIKDIFQRGKICFIPRYRFQSNHMDMVRIESPEEISLLPKTSWNIPQP 114 >6IC4-I nrPDB Length = 233 Score = 27.4 bits (59), Expect = 4.2, Method: Composition-based stats. Identities = 11/31 (35%), Positives = 18/31 (58%) Query: 2 MGRGKLILIEGLDRTGKTTQCNILYKKLQPN 32 + RG++ I G TGKTT ++ +L P+ Sbjct: 24 IRRGQITAIMGPSGTGKTTLLRLIGGQLVPD 54 >2BDT-A nrPDB Length = 189 Score = 27.4 bits (59), Expect = 4.3, Method: Composition-based stats. Identities = 10/30 (33%), Positives = 15/30 (50%) Query: 6 KLILIEGLDRTGKTTQCNILYKKLQPNCKL 35 KL +I G GK+T C L +L + + Sbjct: 3 KLYIITGPAGVGKSTTCKRLAAQLDNSAYI 32 >5C78-A nrPDB Length = 564 Score = 27.4 bits (59), Expect = 4.5, Method: Composition-based stats. Identities = 8/31 (25%), Positives = 16/31 (51%) Query: 2 MGRGKLILIEGLDRTGKTTQCNILYKKLQPN 32 + +G+ I G GK+T +++ L+P Sbjct: 372 IKKGEKIAFIGESGCGKSTLVDLIIGLLKPK 402 >1QF9-A nrPDB Length = 194 Score = 27.4 bits (59), Expect = 4.5, Method: Composition-based stats. Identities = 13/62 (20%), Positives = 24/62 (38%), Gaps = 5/62 (8%) Query: 12 GLDRTGKTTQCNILYK-----KLQPNCKLLKFPERSTRIGGLINEYLTDDSFQLSDQAIH 66 G +GK TQC + + L L + + ++ G +I + + S + Sbjct: 13 GGPGSGKGTQCANIVRDFGWVHLSAGDLLRQEQQSGSKDGEMIATMIKNGEIVPSIVTVK 72 Query: 67 LL 68 LL Sbjct: 73 LL 74 >1L2T-A nrPDB Length = 235 Score = 27.4 bits (59), Expect = 4.5, Method: Composition-based stats. Identities = 8/24 (33%), Positives = 14/24 (58%) Query: 2 MGRGKLILIEGLDRTGKTTQCNIL 25 + G+ + I G +GK+T NI+ Sbjct: 28 IKEGEFVSIMGPSGSGKSTMLNII 51 >5NIK-J nrPDB Length = 654 Score = 27.4 bits (59), Expect = 4.6, Method: Composition-based stats. Identities = 18/77 (23%), Positives = 31/77 (40%), Gaps = 3/77 (3%) Query: 5 GKLILIEGLDRTGKTTQCNIL--YKKLQPNCKLLKFPERSTRIGGLINEYLTDDSFQLSD 62 G+++ I G +GK+T NIL K + + +T + + L + F Sbjct: 34 GEMVAIVGASGSGKSTLMNILGCLDKATSGTYRVAGQDVATLDADALAQ-LRREHFGFIF 92 Query: 63 QAIHLLFSANRWEIVDK 79 Q HLL + V+ Sbjct: 93 QRYHLLSHLTAEQNVEV 109 >1VA6-A nrPDB Length = 518 Score = 27.4 bits (59), Expect = 4.6, Method: Composition-based stats. Identities = 11/49 (22%), Positives = 21/49 (42%) Query: 12 GLDRTGKTTQCNILYKKLQPNCKLLKFPERSTRIGGLINEYLTDDSFQL 60 G+++ GK Q N +++ P+R TR G ++ L + Sbjct: 278 GIEKDGKRLQINSNVLQIENELYAPIRPKRVTRSGESPSDALLRGGIEY 326 >5XU1-A nrPDB Length = 245 Score = 27.4 bits (59), Expect = 5.0, Method: Composition-based stats. Identities = 7/21 (33%), Positives = 12/21 (57%) Query: 5 GKLILIEGLDRTGKTTQCNIL 25 G+ + I G +GK+T N + Sbjct: 46 GEFVAIMGPSGSGKSTLMNTI 66 >1UKY-A nrPDB Length = 203 Score = 27.4 bits (59), Expect = 5.0, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 23/63 (36%), Gaps = 6/63 (9%) Query: 12 GLDRTGKTTQCNILYKKLQ----PNCKLLKFPER--STRIGGLINEYLTDDSFQLSDQAI 65 G GK TQC L K LL+ + ++ G LI + + + + Sbjct: 22 GGPGAGKGTQCEKLVKDYSFVHLSAGDLLRAEQGRAGSQYGELIKNCIKEGQIVPQEITL 81 Query: 66 HLL 68 LL Sbjct: 82 ALL 84 >4XGC-D nrPDB Length = 459 Score = 27.4 bits (59), Expect = 5.1, Method: Composition-based stats. Identities = 12/31 (38%), Positives = 16/31 (51%) Query: 2 MGRGKLILIEGLDRTGKTTQCNILYKKLQPN 32 MG +L+ G +GKTT N + L PN Sbjct: 46 MGESNSLLLLGPRGSGKTTLINSVLADLLPN 76 >1WDT-A nrPDB Length = 665 Score = 27.4 bits (59), Expect = 5.3, Method: Composition-based stats. Identities = 25/126 (19%), Positives = 42/126 (33%), Gaps = 16/126 (12%) Query: 8 ILIEGLDRTGKTTQCNILYKKLQPNCKLLKFPERS-----TRIGGLINEYLTDDSFQLSD 62 + + G +GKTT L K + + E + T L + L Sbjct: 12 VALVGHAGSGKTTLTEALLYKTGAKERRGRVEEGTTTTDYTPEAKLHRTTVRTGVAPLLF 71 Query: 63 --QAIHLLFSANRWEIVDKIKKDLLEGKNIVMDRYVYSGVAYSAAKGTN-GMDLDWCLQP 119 + LL + + V +I+ L + VA SA G G + W + Sbjct: 72 RGHRVFLLDAPGYGDFVGEIRGALEAADAAL--------VAVSAEAGVQVGTERAWTVAE 123 Query: 120 DVGLLK 125 +GL + Sbjct: 124 RLGLPR 129 >1YE8-A nrPDB Length = 178 Score = 27.0 bits (58), Expect = 5.5, Method: Composition-based stats. Identities = 8/26 (30%), Positives = 12/26 (46%) Query: 8 ILIEGLDRTGKTTQCNILYKKLQPNC 33 I+I G GKTT + ++L Sbjct: 3 IIITGEPGVGKTTLVKKIVERLGKRA 28 >5VQ9-D nrPDB Length = 432 Score = 27.0 bits (58), Expect = 5.6, Method: Composition-based stats. Identities = 21/104 (20%), Positives = 40/104 (38%), Gaps = 14/104 (13%) Query: 8 ILIEGLDRTGKTTQCNILYKKLQPNCKLLKFPERSTRIGGLINEYLTDDSFQLSDQAIHL 67 +L+ G TGKT+ C L +KL +L I + + L F S + + Sbjct: 175 VLLHGPPGTGKTSLCKALAQKL--TIRLSSRYRYGQLI-EINSHSLFSKWFSESGKLVTK 231 Query: 68 LFSANRWEIVDKIKKDLLEGK---NIVMDRYVYSGVAYSAAKGT 108 +F KI+ + + +++D+ A +A + Sbjct: 232 MF--------QKIQDLIDDKDALVFVLIDQVESLTAARNACRAG 267 >1YR7-A nrPDB Length = 262 Score = 27.0 bits (58), Expect = 5.6, Method: Composition-based stats. Identities = 8/31 (25%), Positives = 15/31 (48%) Query: 5 GKLILIEGLDRTGKTTQCNILYKKLQPNCKL 35 +++ G +GKTT + L+ N K+ Sbjct: 14 SMIVVFVGTAGSGKTTLTGEFGRYLEDNYKV 44 >2GZA-A nrPDB Length = 361 Score = 27.0 bits (58), Expect = 5.7, Method: Composition-based stats. Identities = 8/33 (24%), Positives = 18/33 (54%) Query: 8 ILIEGLDRTGKTTQCNILYKKLQPNCKLLKFPE 40 I++ G +GKTT L +++ + +L+ + Sbjct: 178 IVVAGETGSGKTTLMKALMQEIPFDQRLITIED 210 >3FB4-A nrPDB Length = 216 Score = 27.0 bits (58), Expect = 5.7, Method: Composition-based stats. Identities = 8/21 (38%), Positives = 12/21 (57%) Query: 8 ILIEGLDRTGKTTQCNILYKK 28 I++ GL GK TQ + +K Sbjct: 3 IVLMGLPGAGKGTQAEQIIEK 23 >5LL6-h nrPDB Length = 608 Score = 27.0 bits (58), Expect = 6.2, Method: Composition-based stats. Identities = 9/28 (32%), Positives = 18/28 (64%) Query: 5 GKLILIEGLDRTGKTTQCNILYKKLQPN 32 +++++ G + TGKTT +L L+P+ Sbjct: 378 SEILVMMGENGTGKTTLIKLLAGALKPD 405 >3NHB-A nrPDB Length = 306 Score = 27.0 bits (58), Expect = 6.4, Method: Composition-based stats. Identities = 6/25 (24%), Positives = 13/25 (52%) Query: 4 RGKLILIEGLDRTGKTTQCNILYKK 28 G+ + + G GK+T +L++ Sbjct: 79 PGQTLALVGPSGAGKSTILRLLFRF 103 >2C9Y-A nrPDB Length = 242 Score = 27.0 bits (58), Expect = 6.6, Method: Composition-based stats. Identities = 11/70 (15%), Positives = 22/70 (31%), Gaps = 5/70 (7%) Query: 4 RGKLILIEGLDRTGKTTQCNILYK-----KLQPNCKLLKFPERSTRIGGLINEYLTDDSF 58 +G ++ G GK TQ L + L L + +G + + Sbjct: 15 KGIRAVLLGPPGAGKGTQAPRLAENFCVCHLATGDMLRAMVASGSELGKKLKATMDAGKL 74 Query: 59 QLSDQAIHLL 68 + + L+ Sbjct: 75 VSDEMVVELI 84 >3MD0-A nrPDB Length = 355 Score = 26.6 bits (57), Expect = 7.4, Method: Composition-based stats. Identities = 14/43 (32%), Positives = 17/43 (39%), Gaps = 3/43 (6%) Query: 10 IEGLDRTGKTTQCNILYKKL---QPNCKLLKFPERSTRIGGLI 49 I G+ GK+T L L +L STR GG I Sbjct: 84 ITGVPGVGKSTAIEALGMHLIERGHRVAVLAVDPSSTRTGGSI 126 >6CS8-A nrPDB Length = 303 Score = 26.6 bits (57), Expect = 7.5, Method: Composition-based stats. Identities = 10/36 (27%), Positives = 17/36 (47%) Query: 8 ILIEGLDRTGKTTQCNILYKKLQPNCKLLKFPERST 43 IL+ G++ GKTT L ++ + K + T Sbjct: 102 ILMVGVNGVGKTTTIGKLARQFEQQGKSVMLAAGDT 137 >4QBH-A nrPDB Length = 217 Score = 26.6 bits (57), Expect = 7.8, Method: Composition-based stats. Identities = 6/21 (28%), Positives = 11/21 (52%) Query: 8 ILIEGLDRTGKTTQCNILYKK 28 +++ GL GK TQ + + Sbjct: 3 LVLMGLPGAGKGTQAERIVEA 23 >5G41-A nrPDB Length = 223 Score = 26.6 bits (57), Expect = 8.0, Method: Composition-based stats. Identities = 7/21 (33%), Positives = 12/21 (57%) Query: 8 ILIEGLDRTGKTTQCNILYKK 28 +++ GL GK TQ + +K Sbjct: 3 LVLMGLPGAGKGTQAEKIVEK 23 >2VE7-C nrPDB Length = 250 Score = 26.6 bits (57), Expect = 8.0, Method: Composition-based stats. Identities = 11/67 (16%), Positives = 26/67 (38%) Query: 138 DNNAEKSGFGDERYETVKFQEKVKQTFMKLLDKEIRKGDESITIVDVTNKGIQEVEALIW 197 S F + F+E ++T+M+ L + D+ + + + ++E L Sbjct: 117 PKAKRTSRFLSGIINFIHFREACRETYMEFLWQYKSSADKMQQLNAAHQEALMKLERLEK 176 Query: 198 QIVEPVL 204 ++ E Sbjct: 177 EVDEDTT 183 >3PVS-A nrPDB Length = 447 Score = 26.6 bits (57), Expect = 8.5, Method: Composition-based stats. Identities = 6/25 (24%), Positives = 12/25 (48%) Query: 12 GLDRTGKTTQCNILYKKLQPNCKLL 36 G TGKTT ++ + + + + Sbjct: 57 GPPGTGKTTLAEVIARYANADVERI 81 >4QBG-B nrPDB Length = 217 Score = 26.6 bits (57), Expect = 8.7, Method: Composition-based stats. Identities = 8/21 (38%), Positives = 11/21 (52%) Query: 8 ILIEGLDRTGKTTQCNILYKK 28 I++ GL GK TQ + K Sbjct: 3 IVLMGLPGAGKGTQAERIVAK 23 >3HR8-A nrPDB Length = 356 Score = 26.6 bits (57), Expect = 8.7, Method: Composition-based stats. Identities = 19/85 (22%), Positives = 34/85 (40%), Gaps = 9/85 (10%) Query: 4 RGKLILIEGLDRTGKTTQCNILYKKLQPNCKLLKF--------PERSTRIGGLINEYLTD 55 RG+++ I G + +GKTT + Q + F P + +G + L Sbjct: 60 RGRIVEIFGQESSGKTTLALHAIAEAQKMGGVAAFIDAEHALDPVYAKNLGVDLKSLLIS 119 Query: 56 DSFQLSDQAIHLLFSANRWEIVDKI 80 +QA+ ++ R +VD I Sbjct: 120 Q-PDHGEQALEIVDELVRSGVVDLI 143 >1XP8-A nrPDB Length = 366 Score = 26.6 bits (57), Expect = 8.9, Method: Composition-based stats. Identities = 14/72 (19%), Positives = 23/72 (31%), Gaps = 8/72 (11%) Query: 4 RGKLILIEGLDRTGKTTQCNILYKKLQPNCKLLKF--------PERSTRIGGLINEYLTD 55 RG++ I G + GKTT + + Q F P + +G +E L Sbjct: 73 RGRITEIYGPESGGKTTLALAIVAQAQKAGGTCAFIDAEHALDPVYARALGVNTDELLVS 132 Query: 56 DSFQLSDQAIHL 67 + Sbjct: 133 QPDNGEQALEIM 144 >4C7O-A nrPDB Length = 298 Score = 26.6 bits (57), Expect = 9.1, Method: Composition-based stats. Identities = 11/29 (37%), Positives = 15/29 (51%) Query: 6 KLILIEGLDRTGKTTQCNILYKKLQPNCK 34 ++L+ GL GKTT L K L+ K Sbjct: 101 AVVLMAGLQGAGKTTSVGKLGKFLREKHK 129 >2YYZ-A nrPDB Length = 359 Score = 26.2 bits (56), Expect = 9.7, Method: Composition-based stats. Identities = 15/80 (18%), Positives = 27/80 (33%), Gaps = 9/80 (11%) Query: 2 MGRGKLILIEGLDRTGKTTQCNILYKKLQPNCKLLKF--------PERSTRIGGLINEYL 53 + G+ + + G GKTT +L +P + F P + +G + Y Sbjct: 26 VKDGEFVALLGPSGCGKTTTLLMLAGIYKPTSGEIYFDDVLVNDIPPKYREVGMVFQNYA 85 Query: 54 TDDSFQLSDQAIHLLFSANR 73 + + I A R Sbjct: 86 LYPHMTV-FENIAFPLRARR 104 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.310 0.128 0.321 Lambda K H 0.267 0.0395 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 7,426,710 Number of Sequences: 36641 Number of extensions: 270103 Number of successful extensions: 1476 Number of sequences better than 10.0: 185 Number of HSP's better than 10.0 without gapping: 151 Number of HSP's successfully gapped in prelim test: 69 Number of HSP's that attempted gapping in prelim test: 1228 Number of HSP's gapped (non-prelim): 229 length of query: 216 length of database: 10,336,785 effective HSP length: 93 effective length of query: 123 effective length of database: 6,929,172 effective search space: 852288156 effective search space used: 852288156 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.3 bits) S2: 57 (26.6 bits)