BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= P00488 (732 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 5MHL-A nrPDB 1523 0.0 3LY6-A nrPDB 428 e-120 1L9N-A nrPDB 406 e-113 1G0D-A nrPDB 401 e-112 2XZZ-A nrPDB 58 2e-08 3EF1-A nrPDB 35 0.090 4XQ0-A nrPDB 35 0.092 2DYM-A nrPDB 30 4.0 5FUR-H nrPDB 30 4.6 2XR7-A nrPDB 30 4.6 3DC8-A nrPDB 30 5.3 >5MHL-A nrPDB Length = 738 Score = 1523 bits (3944), Expect = 0.0, Method: Compositional matrix adjust. Identities = 729/731 (99%), Positives = 730/731 (99%) Query: 2 SETSRTAFGGRRAVPPNNSNAAEDDLPTVELQGVVPRGVNLQEFLNVTSVHLFKERWDTN 61 SETSRTAFGGRRAVPPNNSNAAEDDLPTVELQGVVPRGVNLQEFLNVTSVHLFKERWDTN Sbjct: 8 SETSRTAFGGRRAVPPNNSNAAEDDLPTVELQGVVPRGVNLQEFLNVTSVHLFKERWDTN 67 Query: 62 KVDHHTDKYENNKLIVRRGQSFYVQIDFSRPYDPRRDLFRVEYVIGRYPQENKGTYIPVP 121 KVDHHTDKYENNKLIVRRGQSFYVQIDFSRPYDPRRDLFRVEYVIGRYPQENKGTYIPVP Sbjct: 68 KVDHHTDKYENNKLIVRRGQSFYVQIDFSRPYDPRRDLFRVEYVIGRYPQENKGTYIPVP 127 Query: 122 IVSELQSGKWGAKIVMREDRSVRLSIQSSPKCIVGKFRMYVAVWTPYGVLRTSRNPETDT 181 IVSELQSGKWGAKIVMREDRSVRLSIQSSPKCIVGKFRMYVAVWTPYGVLRTSRNPETDT Sbjct: 128 IVSELQSGKWGAKIVMREDRSVRLSIQSSPKCIVGKFRMYVAVWTPYGVLRTSRNPETDT 187 Query: 182 YILFNPWCEDDAVYLDNEKEREEYVLNDIGVIFYGEVNDIKTRSWSYGQFEDGILDTCLY 241 YILFNPWCEDDAVYLDNEKEREEYVLNDIGVIFYGEVNDIKTRSWSYGQFEDGILDTCLY Sbjct: 188 YILFNPWCEDDAVYLDNEKEREEYVLNDIGVIFYGEVNDIKTRSWSYGQFEDGILDTCLY 247 Query: 242 VMDRAQMDLSGRGNPIKVSRVGSAMVNAKDDEGVLVGSWDNIYAYGVPPSAWTGSVDILL 301 VMDRAQMDLSGRGNPIKVSRVGSAMVNAKDDEGVLVGSWDNIYAYGVPPSAWTGSVDILL Sbjct: 248 VMDRAQMDLSGRGNPIKVSRVGSAMVNAKDDEGVLVGSWDNIYAYGVPPSAWTGSVDILL 307 Query: 302 EYRSSENPVRYGQCWVFAGVFNTFLRCLGIPARIVTNYFSAHDNDANLQMDIFLEEDGNV 361 EYRSSENPVRYGQCWVFAGVFNTFLRCLGIPARIVTNYFSAHDNDANLQMDIFLEEDGNV Sbjct: 308 EYRSSENPVRYGQCWVFAGVFNTFLRCLGIPARIVTNYFSAHDNDANLQMDIFLEEDGNV 367 Query: 362 NSKLTKDSVWNYHCWNEAWMTRPDLPVGFGGWQAVDSTPQENSDGMYRCGPASVQAIKHG 421 NSKLTKDSVWNYHCWNEAWMTRPDLPVGFGGWQAVDSTPQENSDGMYRCGPASVQAIKHG Sbjct: 368 NSKLTKDSVWNYHCWNEAWMTRPDLPVGFGGWQAVDSTPQENSDGMYRCGPASVQAIKHG 427 Query: 422 HVCFQFDAPFVFAEVNSDLIYITAKKDGTHVVENVDATHIGKLIVTKQIGGDGMMDITDT 481 HVCFQFDAPFVFAEVNSDLIYITAKKDGTHVVENVDATHIGKLIVTKQIGGDGMMDITDT Sbjct: 428 HVCFQFDAPFVFAEVNSDLIYITAKKDGTHVVENVDATHIGKLIVTKQIGGDGMMDITDT 487 Query: 482 YKFQEGQEEERLALETALMYGAKKPLNTEGVMKSRSNVDMDFEVENAVLGKDFKLSITFR 541 YKFQEGQEEERLALETALMYGAKKPLNTEGVMKSRSNVDMDFEVENAVLGKDFKLSITFR Sbjct: 488 YKFQEGQEEERLALETALMYGAKKPLNTEGVMKSRSNVDMDFEVENAVLGKDFKLSITFR 547 Query: 542 NNSHNRYTITAYLSANITFYTGVPKAEFKKETFDVTLEPLSFKKEAVLIQAGEYMGQLLE 601 NNSHNRYTITAYLSANITFYTGVPKAEFKKETFDVTLEPLSFKKEAVLIQAGEYMGQLLE Sbjct: 548 NNSHNRYTITAYLSANITFYTGVPKAEFKKETFDVTLEPLSFKKEAVLIQAGEYMGQLLE 607 Query: 602 QASLHFFVTARINETRDVLAKQKSTVLTIPEIIIKVRGTQVVGSDMTVTVQFTNPLKETL 661 QASLHFFVTARINETRDVLAKQKSTVLTIPEIIIKVRGTQVVGSDMTV V+FTNPLKETL Sbjct: 608 QASLHFFVTARINETRDVLAKQKSTVLTIPEIIIKVRGTQVVGSDMTVIVEFTNPLKETL 667 Query: 662 RNVWVHLDGPGVTRPMKKMFREIRPNSTVQWEEVCRPWVSGHRKLIASMSSDSLRHVYGE 721 RNVWVHLDGPGVTRPMKKMFREIRPNSTVQWEEVCRPWVSGHRKLIASMSSDSLRHVYGE Sbjct: 668 RNVWVHLDGPGVTRPMKKMFREIRPNSTVQWEEVCRPWVSGHRKLIASMSSDSLRHVYGE 727 Query: 722 LDVQIQRRPSM 732 LDVQIQRRPSM Sbjct: 728 LDVQIQRRPSM 738 >3LY6-A nrPDB Length = 697 Score = 428 bits (1100), Expect = e-120, Method: Compositional matrix adjust. Identities = 268/689 (38%), Positives = 363/689 (52%), Gaps = 40/689 (5%) Query: 59 DTNKVDHHTDKYENNKLIVRRGQSFYVQIDF-SRPYDPRRDLFRVEYVIGRYPQENKGTY 117 +TN DHHT KL+VRRGQ F++ + F R Y+ D V G P + GT Sbjct: 15 ETNGRDHHTADLCREKLVVRRGQPFWLTLHFEGRNYEASVDSLTFSVVTGPAPSQEAGTK 74 Query: 118 IPVPIVSELQSGKWGAKIVMREDRSVRLSIQSSPKCIVGKFRMYVAVWTPYGVLRTSRNP 177 P+ ++ G W A +V ++D ++ L + + +G +R+ + T Y + S Sbjct: 75 ARFPLRDAVEEGDWTATVVDQQDCTLSLQLTTPANAPIGLYRLSLEASTGY---QGSSFV 131 Query: 178 ETDTYILFNPWCEDDAVYLDNEKEREEYVLNDIGVIFYGEVNDIKTRSWSYGQFEDGILD 237 +LFN WC DAVYLD+E+ER+EYVL G I+ G IK W++GQFEDGILD Sbjct: 132 LGHFILLFNAWCPADAVYLDSEEERQEYVLTQQGFIYQGSAKFIKNIPWNFGQFEDGILD 191 Query: 238 TCLYVMD-------RAQMDLSGRGNPIKVSRVGSAMVNAKDDEGVLVGSWDNIYAYGVPP 290 CL ++D A D S R +P+ V RVGS MVN DD+GVL+G WDN Y GV P Sbjct: 192 ICLILLDVNPKFLKNAGRDCSRRSSPVYVGRVGSGMVNCNDDQGVLLGRWDNNYGDGVSP 251 Query: 291 SAWTGSVDILLEYRSSE-NPVRYGQCWVFAGVFNTFLRCLGIPARIVTNYFSAHDNDANL 349 +W GSVDIL +++ V+YGQCWVFA V T LRCLGIP R+VTNY SAHD ++NL Sbjct: 252 MSWIGSVDILRRWKNHGCQRVKYGQCWVFAAVACTVLRCLGIPTRVVTNYNSAHDQNSNL 311 Query: 350 QMDIFLEEDGNVNSKLTKDSVWNYHCWNEAWMTRPDLPVGFGGWQAVDSTPQENSDGMYR 409 ++ F E G + + +WN+HCW E+WMTRPDL G+ GWQA+D TPQE S+G Y Sbjct: 312 LIEYFRNEFGEIQGD-KSEMIWNFHCWVESWMTRPDLQPGYEGWQALDPTPQEKSEGTYC 370 Query: 410 CGPASVQAIKHGHVCFQFDAPFVFAEVNSDLIYITAKKDGTHVVENVDATHI-GKLIVTK 468 CGP V+AIK G + ++DAPFVFAEVN+D++ + DG+ V ++++ + I G I TK Sbjct: 371 CGPVPVRAIKEGDLSTKYDAPFVFAEVNADVVDWIQQDDGS-VHKSINRSLIVGLKISTK 429 Query: 469 QIGGDGMMDITDTYKFQEGQEEERLALETA--LMYGAKKPLNTEGVMKSRSNVDMDFEVE 526 +G D DIT TYK+ EG EER A A L A+K T M+ R M+ Sbjct: 430 SVGRDEREDITHTYKYPEGSSEEREAFTRANHLNKLAEKE-ETGMAMRIRVGQSMN---- 484 Query: 527 NAVLGKDFKLSITFRNNSHNRYTITAYLSANITFYTGVPKAEF-KKETFDVTLEPLSFKK 585 +G DF + NN+ Y L A Y G+ E K ++ LEP S K Sbjct: 485 ---MGSDFDVFAHITNNTAEEYVCRLLLCARTVSYNGILGPECGTKYLLNLNLEPFSEKS 541 Query: 586 EAVLIQAGEYMGQLLEQASLH---FFVTARINETRDVLAKQKSTVLTIPEIIIKVRGTQV 642 + I +Y L E + V IN L ++ L PEI I++ G Sbjct: 542 VPLCILYEKYRDCLTESNLIKVRALLVEPVIN---SYLLAERDLYLENPEIKIRILGEPK 598 Query: 643 VGSDMTVTVQFTNPLKETLRNVWVHLDGPGVTRPMKKMFREIRPNSTVQWEEV-----CR 697 + V NPL L ++G G+T K + EI P+ EEV Sbjct: 599 QKRKLVAEVSLQNPLPVALEGCTFTVEGAGLTEEQKTV--EI-PDPVEAGEEVKVRMDLL 655 Query: 698 PWVSGHRKLIASMSSDSLRHVYGELDVQI 726 P G KL+ + SD L+ V G +V I Sbjct: 656 PLHMGLHKLVVNFESDKLKAVKGFRNVII 684 >1L9N-A nrPDB Length = 692 Score = 406 bits (1044), Expect = e-113, Method: Compositional matrix adjust. Identities = 242/695 (34%), Positives = 376/695 (54%), Gaps = 40/695 (5%) Query: 58 WDT--NKVDHHTDKYENNKLIVRRGQSFYVQIDFSRPYDPRRDLFRVEYVI--GRYPQEN 113 W T N+ HHTDK+ + +LI+RRGQ+F V + ++ R+E+++ G YP E+ Sbjct: 10 WQTAFNRQAHHTDKFSSQELILRRGQNFQVLMIMNKGLGSNE---RLEFIVSTGPYPSES 66 Query: 114 KGTYIPVPIVSELQSGKWGAKIVMREDRSVRLSIQSSPKCIVGKFRMYVAVWTPYGVLRT 173 T P+ S SG W A + ++ +SI S +G++ M + +++ G+ Sbjct: 67 AMTKAVFPL-SNGSSGGWSAVLQASNGNTLTISISSPASAPIGRYTMALQIFSQGGI--- 122 Query: 174 SRNPETDTYIL-FNPWCEDDAVYLDNEKEREEYVLNDIGVIFYGEVNDIKTRSWSYGQFE 232 + + T+IL FNPW D+V++ N EREEYV D G+IF G N I W++GQFE Sbjct: 123 -SSVKLGTFILLFNPWLNVDSVFMGNHAEREEYVQEDAGIIFVGSTNRIGMIGWNFGQFE 181 Query: 233 DGILDTCLYVMDR-------AQMDLSGRGNPIKVSRVGSAMVNAKDDEGVLVGSWDNIYA 285 + IL CL ++DR A D++ R +P V RV SAM+N+ DD GVL G+W Y Sbjct: 182 EDILSICLSILDRSLNFRRDAATDVASRNDPKYVGRVLSAMINSNDDNGVLAGNWSGTYT 241 Query: 286 YGVPPSAWTGSVDILLEYRSSE-NPVRYGQCWVFAGVFNTFLRCLGIPARIVTNYFSAHD 344 G P +W GSV+IL ++ S +PVRYGQCWVFAG NT LR LGIP+R++TN+ SAHD Sbjct: 242 GGRDPRSWDGSVEILKNWKKSGLSPVRYGQCWVFAGTLNTALRSLGIPSRVITNFNSAHD 301 Query: 345 NDANLQMDIFLEEDGNVNSKLTKDSVWNYHCWNEAWMTRPDLPVGFGGWQAVDSTPQENS 404 D NL +D++ + GN K DSVWN+H WNE W R DL +GGWQ +D+TPQE S Sbjct: 302 TDRNLSVDVYYDPMGNPLDK-GSDSVWNFHVWNEGWFVRSDLGPSYGGWQVLDATPQERS 360 Query: 405 DGMYRCGPASVQAIKHGHVCFQFDAPFVFAEVNSDLI-YITAKKDGTHVVENVDATHIGK 463 G+++CGPASV ++ G V FD PF+FAEVN+D I ++ G +V++ IG+ Sbjct: 361 QGVFQCGPASVIGVREGDVQLNFDMPFIFAEVNADRITWLYDNTTGKQWKNSVNSHTIGR 420 Query: 464 LIVTKQIGGDGMMDITDTYKFQEGQEEERLALETALMYGAKKPLNTEGVMKSRSNVDMDF 523 I TK +G + MD+TD YK+ EG ++ER + AL G KP NT S ++ + Sbjct: 421 YISTKAVGSNARMDVTDKYKYPEGSDQERQVFQKAL--GKLKP-NTPFAATSSMGLETE- 476 Query: 524 EVENAVL-----------GKDFKLSITFRNNSHNRYTITAYLSANITFYTGVPKAEFKKE 572 E E +++ GK+ L + +N S + T+T ++A Y G E K+ Sbjct: 477 EQEPSIIGKLKVAGMLAVGKEVNLVLLLKNLSRDTKTVTVNMTAWTIIYNGTLVHEVWKD 536 Query: 573 TFDVTLEPLSFKKEAVLIQAGEYMGQLLEQASLHFFVTARINETRDVLAKQKSTVLTIPE 632 + ++L+P + + I +Y L + ++ + +V+ ++ +L P Sbjct: 537 SATMSLDPEEEAEHPIKISYAQYERYLKSDNMIRITAVCKVPDESEVVV-ERDIILDNPT 595 Query: 633 IIIKVRGTQVVGSDMTVTVQFTNPLKETLRNVWVHLDGPGVTRPMKKM-FREIRPNSTVQ 691 + ++V V + V + F+NPL E +R+ + ++G G+ K+ + P + Sbjct: 596 LTLEVLNEARVRKPVNVQMLFSNPLDEPVRDCVLMVEGSGLLLGNLKIDVPTLGPKERSR 655 Query: 692 WEEVCRPWVSGHRKLIASMSSDSLRHVYGELDVQI 726 P SG ++L+A S + + L + + Sbjct: 656 VRFDILPSRSGTKQLLADFSCNKFPAIKAMLSIDV 690 >1G0D-A nrPDB Length = 695 Score = 401 bits (1031), Expect = e-112, Method: Compositional matrix adjust. Identities = 236/686 (34%), Positives = 357/686 (52%), Gaps = 28/686 (4%) Query: 57 RWDTNKVDHHTDKYENNKLIVRRGQSFYVQIDFSRPYDPRRDLFRVEYVIGRYPQENKGT 116 R N + H T + + +LIVRRGQ F + + S P+ L V ++ G Sbjct: 14 RSHENNLAHRTREIDRERLIVRRGQPFSITLQCSDSLPPKHHLELVLHL---------GK 64 Query: 117 YIPVPIVSELQSG---KWGAKIVMREDRSVRLSIQSSPKCIVGKFRMYVAVWTPYGVLRT 173 V I + + G KW +D + L++ S ++G +R+ V V +P G + Sbjct: 65 RDEVVIKVQKEHGARDKWWFNQQGAQD-EILLTLHSPANAVIGHYRLAVLVMSPDGHI-V 122 Query: 174 SRNPETDTYILFNPWCEDDAVYLDNEKEREEYVLNDIGVIFYGEVNDIKTRSWSYGQFED 233 R + ++LFNPWC DD VYL +E + +EYV+N+ GVI+ G + I++ W+YGQFED Sbjct: 123 ERADKISFHMLFNPWCRDDMVYLPDESKLQEYVMNEDGVIYMGTWDYIRSIPWNYGQFED 182 Query: 234 GILDTCLYVMDRA-------QMDLSGRGNPIKVSRVGSAMVNAKDDEGVLVGSWDNIYAY 286 ++D C V+D + +MD+ R +P+ V R +AMVN+ D GVL G W+ Y Sbjct: 183 YVMDICFEVLDNSPAALKNSEMDIEHRSDPVYVGRTITAMVNSNGDRGVLTGRWEEPYTD 242 Query: 287 GVPPSAWTGSVDILLEY-RSSENPVRYGQCWVFAGVFNTFLRCLGIPARIVTNYFSAHDN 345 GV P WTGSV IL ++ ++ PV+YGQCWVFA V T LRCLGIP R +TN+ SAHD Sbjct: 243 GVAPYRWTGSVPILQQWSKAGVRPVKYGQCWVFAAVACTVLRCLGIPTRPITNFASAHDV 302 Query: 346 DANLQMDIFLEED-GNVNSKLTKDSVWNYHCWNEAWMTRPDLPVGFGGWQAVDSTPQENS 404 D NL +D L E +++S+ DS WN+HCW E+WM+R DLP G GWQ +D TPQE S Sbjct: 303 DGNLSVDFLLNERLESLDSRQRSDSSWNFHCWVESWMSREDLPEGNDGWQVLDPTPQELS 362 Query: 405 DGMYRCGPASVQAIKHGHVCFQFDAPFVFAEVNSDLIYITAKKDGTHVVENVDATHIGKL 464 DG + CGP V AIK G++ ++DAPFVFAEVN+D IY +KDG D +GK Sbjct: 363 DGEFCCGPCPVAAIKEGNLGVKYDAPFVFAEVNADTIYWIVQKDGQRRKITEDHASVGKN 422 Query: 465 IVTKQIGGDGMMDITDTYKFQEGQEEERLALETALMYGAKKPLNTEGVMKSRSNVDMDFE 524 I TK + G+ D+T YK+ EG ++ER + A ++ + + + + + Sbjct: 423 ISTKSVYGNHREDVTLHYKYPEGSQKEREVYKKA----GRRVTEPSNEIAEQGRLQLSIK 478 Query: 525 VENAVLGKDFKLSITFRNNSHNRYTITAYLSANITFYTGVPKAEFKKETFDVTLEPLSFK 584 V G DF + + +N + A Y + + E +++T VT+ Sbjct: 479 HAQPVFGTDFDVIVEVKNEGGRDAHAQLTMLAMAVTYNSLRRGECQRKTISVTVPAHKAH 538 Query: 585 KEAVLIQAGEYMGQLLEQASLHFFVTARINETRDVLAKQKSTVLTIPEIIIKVRGTQVVG 644 KE + + +Y+ + E + + + L+ PE++++V G VV Sbjct: 539 KEVMRLHYDDYVRCVSEHHLIRVKALLDAPGENGPIMTVANIPLSTPELLVQVPGKAVVW 598 Query: 645 SDMTVTVQFTNPLKETLRNVWVHLDGPGVTRPMK-KMFREIRPNSTVQWEEVCRPWVSGH 703 +T V FTNPL L+ L+G G+ + + + P+ V + P +G Sbjct: 599 EPLTAYVSFTNPLPVPLKGGVFTLEGAGLLSATQIHVNGAVAPSGKVSVKLSFSPMRTGV 658 Query: 704 RKLIASMSSDSLRHVYGELDVQIQRR 729 RKL+ SD L+ V G V + ++ Sbjct: 659 RKLLVDFDSDRLKDVKGVTTVVVHKK 684 >2XZZ-A nrPDB Length = 102 Score = 57.8 bits (138), Expect = 2e-08, Method: Composition-based stats. Identities = 34/88 (38%), Positives = 45/88 (51%) Query: 639 GTQVVGSDMTVTVQFTNPLKETLRNVWVHLDGPGVTRPMKKMFREIRPNSTVQWEEVCRP 698 G VVG + V + F NPL TL NV L+G G+ RP +I N TV + P Sbjct: 14 GAAVVGQECEVQIVFKNPLPVTLTNVVFRLEGSGLQRPKILNVGDIGGNETVTLRQSFVP 73 Query: 699 WVSGHRKLIASMSSDSLRHVYGELDVQI 726 G R+LIAS+ S L V+G + V + Sbjct: 74 VRPGPRQLIASLDSPQLSQVHGVIQVDV 101 >3EF1-A nrPDB Length = 442 Score = 35.4 bits (80), Expect = 0.090, Method: Compositional matrix adjust. Identities = 17/40 (42%), Positives = 25/40 (62%) Query: 197 DNEKEREEYVLNDIGVIFYGEVNDIKTRSWSYGQFEDGIL 236 D+E ER E VL DI ++Y E NDI +RS ++ G++ Sbjct: 305 DHELERLEKVLKDIHAVYYEEENDISSRSGNHKHANVGLI 344 >4XQ0-A nrPDB Length = 372 Score = 35.4 bits (80), Expect = 0.092, Method: Compositional matrix adjust. Identities = 17/40 (42%), Positives = 25/40 (62%) Query: 197 DNEKEREEYVLNDIGVIFYGEVNDIKTRSWSYGQFEDGIL 236 D+E ER E VL DI ++Y E NDI +RS ++ G++ Sbjct: 235 DHELERLEKVLKDIHAVYYEEENDISSRSGNHKHANVGLI 274 >2DYM-A nrPDB Length = 297 Score = 30.0 bits (66), Expect = 4.0, Method: Compositional matrix adjust. Identities = 22/85 (25%), Positives = 37/85 (43%), Gaps = 5/85 (5%) Query: 642 VVGSDMTVTVQFTNPLKETLRNVWVHL----DGPGVTRPMKKMFREIRPNSTVQWEEVCR 697 + G T T F N +K+ L + +HL P P+ + QW++VC Sbjct: 97 LAGKSATFTTSFENQVKDVLTFLRIHLVMGDSLPPTIIPIASSKTQAEKFWFHQWKQVCF 156 Query: 698 PWVSGHRKLIASMSSDSLRHVYGEL 722 ++G K I S+S + R +G + Sbjct: 157 I-LNGSSKAIMSLSVNEARKFWGSV 180 >5FUR-H nrPDB Length = 349 Score = 29.6 bits (65), Expect = 4.6, Method: Compositional matrix adjust. Identities = 19/91 (20%), Positives = 38/91 (41%), Gaps = 17/91 (18%) Query: 649 VTVQFTNPLKETLRNVWV--HLDGPGVTRPMKKMFREIRPNSTVQWE------------- 693 +T+ N K R +++ P V + +K++ + +WE Sbjct: 136 ITLPLKNVRKRRFRKTAKKKYIESPDVEKEVKRLLSTDAEAVSTRWEIIAEDETKEAENQ 195 Query: 694 --EVCRPWVSGHRKLIASMSSDSLRHVYGEL 722 ++ P +SGHR+ S+ D LR ++ +L Sbjct: 196 GLDISSPGMSGHRQGHDSLEHDELREIFNDL 226 >2XR7-A nrPDB Length = 453 Score = 29.6 bits (65), Expect = 4.6, Method: Compositional matrix adjust. Identities = 18/42 (42%), Positives = 25/42 (59%), Gaps = 2/42 (4%) Query: 241 YVMDRAQMDLSGR-GNPIKVSRVGSAMVN-AKDDEGVLVGSW 280 YV Q+DL+G+ G I V +G A+ KD+E +L GSW Sbjct: 326 YVARTRQVDLAGKEGFTIAVELIGEAIRKRMKDEEWILSGSW 367 >3DC8-A nrPDB Length = 490 Score = 29.6 bits (65), Expect = 5.3, Method: Compositional matrix adjust. Identities = 13/39 (33%), Positives = 21/39 (53%) Query: 17 PNNSNAAEDDLPTVELQGVVPRGVNLQEFLNVTSVHLFK 55 PN + ED +P + GV + + EF+ VTS ++ K Sbjct: 333 PNGTGGLEDRMPMLWTYGVATGRITMNEFVAVTSTNIAK 371 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 5MHL-A nrPDB 1273 0.0 1G0D-A nrPDB 1008 0.0 3LY6-A nrPDB 974 0.0 1L9N-A nrPDB 936 0.0 2XZZ-A nrPDB 127 2e-29 Sequences not found previously or not previously below threshold: 3T9W-A nrPDB 35 0.15 6CG0-A nrPDB 33 0.42 5ZDZ-A nrPDB 33 0.42 3DC8-A nrPDB 31 2.0 5DJK-A nrPDB 31 2.3 1J39-A nrPDB 30 2.6 5HUK-A nrPDB 30 3.4 3PLV-A nrPDB 30 4.2 4XQ0-A nrPDB 29 6.4 3EF1-A nrPDB 29 6.5 3TIA-A nrPDB 29 7.7 4K1I-A nrPDB 29 8.3 CONVERGED! >5MHL-A nrPDB Length = 738 Score = 1273 bits (3295), Expect = 0.0, Method: Composition-based stats. Identities = 729/731 (99%), Positives = 730/731 (99%) Query: 2 SETSRTAFGGRRAVPPNNSNAAEDDLPTVELQGVVPRGVNLQEFLNVTSVHLFKERWDTN 61 SETSRTAFGGRRAVPPNNSNAAEDDLPTVELQGVVPRGVNLQEFLNVTSVHLFKERWDTN Sbjct: 8 SETSRTAFGGRRAVPPNNSNAAEDDLPTVELQGVVPRGVNLQEFLNVTSVHLFKERWDTN 67 Query: 62 KVDHHTDKYENNKLIVRRGQSFYVQIDFSRPYDPRRDLFRVEYVIGRYPQENKGTYIPVP 121 KVDHHTDKYENNKLIVRRGQSFYVQIDFSRPYDPRRDLFRVEYVIGRYPQENKGTYIPVP Sbjct: 68 KVDHHTDKYENNKLIVRRGQSFYVQIDFSRPYDPRRDLFRVEYVIGRYPQENKGTYIPVP 127 Query: 122 IVSELQSGKWGAKIVMREDRSVRLSIQSSPKCIVGKFRMYVAVWTPYGVLRTSRNPETDT 181 IVSELQSGKWGAKIVMREDRSVRLSIQSSPKCIVGKFRMYVAVWTPYGVLRTSRNPETDT Sbjct: 128 IVSELQSGKWGAKIVMREDRSVRLSIQSSPKCIVGKFRMYVAVWTPYGVLRTSRNPETDT 187 Query: 182 YILFNPWCEDDAVYLDNEKEREEYVLNDIGVIFYGEVNDIKTRSWSYGQFEDGILDTCLY 241 YILFNPWCEDDAVYLDNEKEREEYVLNDIGVIFYGEVNDIKTRSWSYGQFEDGILDTCLY Sbjct: 188 YILFNPWCEDDAVYLDNEKEREEYVLNDIGVIFYGEVNDIKTRSWSYGQFEDGILDTCLY 247 Query: 242 VMDRAQMDLSGRGNPIKVSRVGSAMVNAKDDEGVLVGSWDNIYAYGVPPSAWTGSVDILL 301 VMDRAQMDLSGRGNPIKVSRVGSAMVNAKDDEGVLVGSWDNIYAYGVPPSAWTGSVDILL Sbjct: 248 VMDRAQMDLSGRGNPIKVSRVGSAMVNAKDDEGVLVGSWDNIYAYGVPPSAWTGSVDILL 307 Query: 302 EYRSSENPVRYGQCWVFAGVFNTFLRCLGIPARIVTNYFSAHDNDANLQMDIFLEEDGNV 361 EYRSSENPVRYGQCWVFAGVFNTFLRCLGIPARIVTNYFSAHDNDANLQMDIFLEEDGNV Sbjct: 308 EYRSSENPVRYGQCWVFAGVFNTFLRCLGIPARIVTNYFSAHDNDANLQMDIFLEEDGNV 367 Query: 362 NSKLTKDSVWNYHCWNEAWMTRPDLPVGFGGWQAVDSTPQENSDGMYRCGPASVQAIKHG 421 NSKLTKDSVWNYHCWNEAWMTRPDLPVGFGGWQAVDSTPQENSDGMYRCGPASVQAIKHG Sbjct: 368 NSKLTKDSVWNYHCWNEAWMTRPDLPVGFGGWQAVDSTPQENSDGMYRCGPASVQAIKHG 427 Query: 422 HVCFQFDAPFVFAEVNSDLIYITAKKDGTHVVENVDATHIGKLIVTKQIGGDGMMDITDT 481 HVCFQFDAPFVFAEVNSDLIYITAKKDGTHVVENVDATHIGKLIVTKQIGGDGMMDITDT Sbjct: 428 HVCFQFDAPFVFAEVNSDLIYITAKKDGTHVVENVDATHIGKLIVTKQIGGDGMMDITDT 487 Query: 482 YKFQEGQEEERLALETALMYGAKKPLNTEGVMKSRSNVDMDFEVENAVLGKDFKLSITFR 541 YKFQEGQEEERLALETALMYGAKKPLNTEGVMKSRSNVDMDFEVENAVLGKDFKLSITFR Sbjct: 488 YKFQEGQEEERLALETALMYGAKKPLNTEGVMKSRSNVDMDFEVENAVLGKDFKLSITFR 547 Query: 542 NNSHNRYTITAYLSANITFYTGVPKAEFKKETFDVTLEPLSFKKEAVLIQAGEYMGQLLE 601 NNSHNRYTITAYLSANITFYTGVPKAEFKKETFDVTLEPLSFKKEAVLIQAGEYMGQLLE Sbjct: 548 NNSHNRYTITAYLSANITFYTGVPKAEFKKETFDVTLEPLSFKKEAVLIQAGEYMGQLLE 607 Query: 602 QASLHFFVTARINETRDVLAKQKSTVLTIPEIIIKVRGTQVVGSDMTVTVQFTNPLKETL 661 QASLHFFVTARINETRDVLAKQKSTVLTIPEIIIKVRGTQVVGSDMTV V+FTNPLKETL Sbjct: 608 QASLHFFVTARINETRDVLAKQKSTVLTIPEIIIKVRGTQVVGSDMTVIVEFTNPLKETL 667 Query: 662 RNVWVHLDGPGVTRPMKKMFREIRPNSTVQWEEVCRPWVSGHRKLIASMSSDSLRHVYGE 721 RNVWVHLDGPGVTRPMKKMFREIRPNSTVQWEEVCRPWVSGHRKLIASMSSDSLRHVYGE Sbjct: 668 RNVWVHLDGPGVTRPMKKMFREIRPNSTVQWEEVCRPWVSGHRKLIASMSSDSLRHVYGE 727 Query: 722 LDVQIQRRPSM 732 LDVQIQRRPSM Sbjct: 728 LDVQIQRRPSM 738 >1G0D-A nrPDB Length = 695 Score = 1008 bits (2605), Expect = 0.0, Method: Composition-based stats. Identities = 236/686 (34%), Positives = 357/686 (52%), Gaps = 28/686 (4%) Query: 57 RWDTNKVDHHTDKYENNKLIVRRGQSFYVQIDFSRPYDPRRDLFRVEYVIGRYPQENKGT 116 R N + H T + + +LIVRRGQ F + + S P+ L V ++ G Sbjct: 14 RSHENNLAHRTREIDRERLIVRRGQPFSITLQCSDSLPPKHHLELVLHL---------GK 64 Query: 117 YIPVPIVSELQSG---KWGAKIVMREDRSVRLSIQSSPKCIVGKFRMYVAVWTPYGVLRT 173 V I + + G KW +D + L++ S ++G +R+ V V +P G + Sbjct: 65 RDEVVIKVQKEHGARDKWWFNQQGAQD-EILLTLHSPANAVIGHYRLAVLVMSPDGHI-V 122 Query: 174 SRNPETDTYILFNPWCEDDAVYLDNEKEREEYVLNDIGVIFYGEVNDIKTRSWSYGQFED 233 R + ++LFNPWC DD VYL +E + +EYV+N+ GVI+ G + I++ W+YGQFED Sbjct: 123 ERADKISFHMLFNPWCRDDMVYLPDESKLQEYVMNEDGVIYMGTWDYIRSIPWNYGQFED 182 Query: 234 GILDTCLYVMDRA-------QMDLSGRGNPIKVSRVGSAMVNAKDDEGVLVGSWDNIYAY 286 ++D C V+D + +MD+ R +P+ V R +AMVN+ D GVL G W+ Y Sbjct: 183 YVMDICFEVLDNSPAALKNSEMDIEHRSDPVYVGRTITAMVNSNGDRGVLTGRWEEPYTD 242 Query: 287 GVPPSAWTGSVDILLEY-RSSENPVRYGQCWVFAGVFNTFLRCLGIPARIVTNYFSAHDN 345 GV P WTGSV IL ++ ++ PV+YGQCWVFA V T LRCLGIP R +TN+ SAHD Sbjct: 243 GVAPYRWTGSVPILQQWSKAGVRPVKYGQCWVFAAVACTVLRCLGIPTRPITNFASAHDV 302 Query: 346 DANLQMDIFLEED-GNVNSKLTKDSVWNYHCWNEAWMTRPDLPVGFGGWQAVDSTPQENS 404 D NL +D L E +++S+ DS WN+HCW E+WM+R DLP G GWQ +D TPQE S Sbjct: 303 DGNLSVDFLLNERLESLDSRQRSDSSWNFHCWVESWMSREDLPEGNDGWQVLDPTPQELS 362 Query: 405 DGMYRCGPASVQAIKHGHVCFQFDAPFVFAEVNSDLIYITAKKDGTHVVENVDATHIGKL 464 DG + CGP V AIK G++ ++DAPFVFAEVN+D IY +KDG D +GK Sbjct: 363 DGEFCCGPCPVAAIKEGNLGVKYDAPFVFAEVNADTIYWIVQKDGQRRKITEDHASVGKN 422 Query: 465 IVTKQIGGDGMMDITDTYKFQEGQEEERLALETALMYGAKKPLNTEGVMKSRSNVDMDFE 524 I TK + G+ D+T YK+ EG ++ER + A ++ + + + + + Sbjct: 423 ISTKSVYGNHREDVTLHYKYPEGSQKEREVYKKA----GRRVTEPSNEIAEQGRLQLSIK 478 Query: 525 VENAVLGKDFKLSITFRNNSHNRYTITAYLSANITFYTGVPKAEFKKETFDVTLEPLSFK 584 V G DF + + +N + A Y + + E +++T VT+ Sbjct: 479 HAQPVFGTDFDVIVEVKNEGGRDAHAQLTMLAMAVTYNSLRRGECQRKTISVTVPAHKAH 538 Query: 585 KEAVLIQAGEYMGQLLEQASLHFFVTARINETRDVLAKQKSTVLTIPEIIIKVRGTQVVG 644 KE + + +Y+ + E + + + L+ PE++++V G VV Sbjct: 539 KEVMRLHYDDYVRCVSEHHLIRVKALLDAPGENGPIMTVANIPLSTPELLVQVPGKAVVW 598 Query: 645 SDMTVTVQFTNPLKETLRNVWVHLDGPGVTRPMK-KMFREIRPNSTVQWEEVCRPWVSGH 703 +T V FTNPL L+ L+G G+ + + + P+ V + P +G Sbjct: 599 EPLTAYVSFTNPLPVPLKGGVFTLEGAGLLSATQIHVNGAVAPSGKVSVKLSFSPMRTGV 658 Query: 704 RKLIASMSSDSLRHVYGELDVQIQRR 729 RKL+ SD L+ V G V + ++ Sbjct: 659 RKLLVDFDSDRLKDVKGVTTVVVHKK 684 >3LY6-A nrPDB Length = 697 Score = 974 bits (2517), Expect = 0.0, Method: Composition-based stats. Identities = 260/683 (38%), Positives = 357/683 (52%), Gaps = 28/683 (4%) Query: 59 DTNKVDHHTDKYENNKLIVRRGQSFYVQIDF-SRPYDPRRDLFRVEYVIGRYPQENKGTY 117 +TN DHHT KL+VRRGQ F++ + F R Y+ D V G P + GT Sbjct: 15 ETNGRDHHTADLCREKLVVRRGQPFWLTLHFEGRNYEASVDSLTFSVVTGPAPSQEAGTK 74 Query: 118 IPVPIVSELQSGKWGAKIVMREDRSVRLSIQSSPKCIVGKFRMYVAVWTPYGVLRTSRNP 177 P+ ++ G W A +V ++D ++ L + + +G +R+ + T Y + S Sbjct: 75 ARFPLRDAVEEGDWTATVVDQQDCTLSLQLTTPANAPIGLYRLSLEASTGY---QGSSFV 131 Query: 178 ETDTYILFNPWCEDDAVYLDNEKEREEYVLNDIGVIFYGEVNDIKTRSWSYGQFEDGILD 237 +LFN WC DAVYLD+E+ER+EYVL G I+ G IK W++GQFEDGILD Sbjct: 132 LGHFILLFNAWCPADAVYLDSEEERQEYVLTQQGFIYQGSAKFIKNIPWNFGQFEDGILD 191 Query: 238 TCLYVMD-------RAQMDLSGRGNPIKVSRVGSAMVNAKDDEGVLVGSWDNIYAYGVPP 290 CL ++D A D S R +P+ V RVGS MVN DD+GVL+G WDN Y GV P Sbjct: 192 ICLILLDVNPKFLKNAGRDCSRRSSPVYVGRVGSGMVNCNDDQGVLLGRWDNNYGDGVSP 251 Query: 291 SAWTGSVDILLEYRSSE-NPVRYGQCWVFAGVFNTFLRCLGIPARIVTNYFSAHDNDANL 349 +W GSVDIL +++ V+YGQCWVFA V T LRCLGIP R+VTNY SAHD ++NL Sbjct: 252 MSWIGSVDILRRWKNHGCQRVKYGQCWVFAAVACTVLRCLGIPTRVVTNYNSAHDQNSNL 311 Query: 350 QMDIFLEEDGNVNSKLTKDSVWNYHCWNEAWMTRPDLPVGFGGWQAVDSTPQENSDGMYR 409 ++ F E G + + +WN+HCW E+WMTRPDL G+ GWQA+D TPQE S+G Y Sbjct: 312 LIEYFRNEFGEIQGD-KSEMIWNFHCWVESWMTRPDLQPGYEGWQALDPTPQEKSEGTYC 370 Query: 410 CGPASVQAIKHGHVCFQFDAPFVFAEVNSDLIYITAKKDGTHVVENVDATHI-GKLIVTK 468 CGP V+AIK G + ++DAPFVFAEVN+D++ + DG+ V ++++ + I G I TK Sbjct: 371 CGPVPVRAIKEGDLSTKYDAPFVFAEVNADVVDWIQQDDGS-VHKSINRSLIVGLKISTK 429 Query: 469 QIGGDGMMDITDTYKFQEGQEEERLALETA--LMYGAKKPLNTEGVMKSRSNVDMDFEVE 526 +G D DIT TYK+ EG EER A A L A+K T M+ R M+ Sbjct: 430 SVGRDEREDITHTYKYPEGSSEEREAFTRANHLNKLAEKE-ETGMAMRIRVGQSMN---- 484 Query: 527 NAVLGKDFKLSITFRNNSHNRYTITAYLSANITFYTGVPKAEF-KKETFDVTLEPLSFKK 585 +G DF + NN+ Y L A Y G+ E K ++ LEP S K Sbjct: 485 ---MGSDFDVFAHITNNTAEEYVCRLLLCARTVSYNGILGPECGTKYLLNLNLEPFSEKS 541 Query: 586 EAVLIQAGEYMGQLLEQASLHFFVTARINETRDVLAKQKSTVLTIPEIIIKVRGTQVVGS 645 + I +Y L E + L ++ L PEI I++ G Sbjct: 542 VPLCILYEKYRDCLTESNLIKVRALLVEPVINSYLLAERDLYLENPEIKIRILGEPKQKR 601 Query: 646 DMTVTVQFTNPLKETLRNVWVHLDGPGVTRPMKKM-FRE-IRPNSTVQWEEVCRPWVSGH 703 + V NPL L ++G G+T K + + + V+ P G Sbjct: 602 KLVAEVSLQNPLPVALEGCTFTVEGAGLTEEQKTVEIPDPVEAGEEVKVRMDLLPLHMGL 661 Query: 704 RKLIASMSSDSLRHVYGELDVQI 726 KL+ + SD L+ V G +V I Sbjct: 662 HKLVVNFESDKLKAVKGFRNVII 684 >1L9N-A nrPDB Length = 692 Score = 936 bits (2418), Expect = 0.0, Method: Composition-based stats. Identities = 240/692 (34%), Positives = 368/692 (53%), Gaps = 34/692 (4%) Query: 58 WDT--NKVDHHTDKYENNKLIVRRGQSFYVQIDFSRPYDPRRDLFRVEYVIGRYPQENKG 115 W T N+ HHTDK+ + +LI+RRGQ+F V + ++ L G YP E+ Sbjct: 10 WQTAFNRQAHHTDKFSSQELILRRGQNFQVLMIMNKGLGSNERLE-FIVSTGPYPSESAM 68 Query: 116 TYIPVPIVSELQSGKWGAKIVMREDRSVRLSIQSSPKCIVGKFRMYVAVWTPYGVLRTSR 175 T P+ S SG W A + ++ +SI S +G++ M + +++ G+ S Sbjct: 69 TKAVFPL-SNGSSGGWSAVLQASNGNTLTISISSPASAPIGRYTMALQIFSQGGI---SS 124 Query: 176 NPETDTYILFNPWCEDDAVYLDNEKEREEYVLNDIGVIFYGEVNDIKTRSWSYGQFEDGI 235 +LFNPW D+V++ N EREEYV D G+IF G N I W++GQFE+ I Sbjct: 125 VKLGTFILLFNPWLNVDSVFMGNHAEREEYVQEDAGIIFVGSTNRIGMIGWNFGQFEEDI 184 Query: 236 LDTCLYVMDR-------AQMDLSGRGNPIKVSRVGSAMVNAKDDEGVLVGSWDNIYAYGV 288 L CL ++DR A D++ R +P V RV SAM+N+ DD GVL G+W Y G Sbjct: 185 LSICLSILDRSLNFRRDAATDVASRNDPKYVGRVLSAMINSNDDNGVLAGNWSGTYTGGR 244 Query: 289 PPSAWTGSVDILLEYRSSE-NPVRYGQCWVFAGVFNTFLRCLGIPARIVTNYFSAHDNDA 347 P +W GSV+IL ++ S +PVRYGQCWVFAG NT LR LGIP+R++TN+ SAHD D Sbjct: 245 DPRSWDGSVEILKNWKKSGLSPVRYGQCWVFAGTLNTALRSLGIPSRVITNFNSAHDTDR 304 Query: 348 NLQMDIFLEEDGNVNSKLTKDSVWNYHCWNEAWMTRPDLPVGFGGWQAVDSTPQENSDGM 407 NL +D++ + GN K DSVWN+H WNE W R DL +GGWQ +D+TPQE S G+ Sbjct: 305 NLSVDVYYDPMGNPLDK-GSDSVWNFHVWNEGWFVRSDLGPSYGGWQVLDATPQERSQGV 363 Query: 408 YRCGPASVQAIKHGHVCFQFDAPFVFAEVNSDLI-YITAKKDGTHVVENVDATHIGKLIV 466 ++CGPASV ++ G V FD PF+FAEVN+D I ++ G +V++ IG+ I Sbjct: 364 FQCGPASVIGVREGDVQLNFDMPFIFAEVNADRITWLYDNTTGKQWKNSVNSHTIGRYIS 423 Query: 467 TKQIGGDGMMDITDTYKFQEGQEEERLALETALMYGAKKPLNTEGVMKSRSNVDMDFEVE 526 TK +G + MD+TD YK+ EG ++ER + AL G KP NT S ++ + E E Sbjct: 424 TKAVGSNARMDVTDKYKYPEGSDQERQVFQKAL--GKLKP-NTPFAATSSMGLETE-EQE 479 Query: 527 NAVL-----------GKDFKLSITFRNNSHNRYTITAYLSANITFYTGVPKAEFKKETFD 575 +++ GK+ L + +N S + T+T ++A Y G E K++ Sbjct: 480 PSIIGKLKVAGMLAVGKEVNLVLLLKNLSRDTKTVTVNMTAWTIIYNGTLVHEVWKDSAT 539 Query: 576 VTLEPLSFKKEAVLIQAGEYMGQLLEQASLHFFVTARINETRDVLAKQKSTVLTIPEIII 635 ++L+P + + I +Y L + ++ + +V+ ++ +L P + + Sbjct: 540 MSLDPEEEAEHPIKISYAQYERYLKSDNMIRITAVCKVPDESEVVV-ERDIILDNPTLTL 598 Query: 636 KVRGTQVVGSDMTVTVQFTNPLKETLRNVWVHLDGPGVTRPMKKM-FREIRPNSTVQWEE 694 +V V + V + F+NPL E +R+ + ++G G+ K+ + P + Sbjct: 599 EVLNEARVRKPVNVQMLFSNPLDEPVRDCVLMVEGSGLLLGNLKIDVPTLGPKERSRVRF 658 Query: 695 VCRPWVSGHRKLIASMSSDSLRHVYGELDVQI 726 P SG ++L+A S + + L + + Sbjct: 659 DILPSRSGTKQLLADFSCNKFPAIKAMLSIDV 690 >2XZZ-A nrPDB Length = 102 Score = 127 bits (318), Expect = 2e-29, Method: Composition-based stats. Identities = 34/94 (36%), Positives = 48/94 (51%) Query: 633 IIIKVRGTQVVGSDMTVTVQFTNPLKETLRNVWVHLDGPGVTRPMKKMFREIRPNSTVQW 692 + + + G VVG + V + F NPL TL NV L+G G+ RP +I N TV Sbjct: 8 LSLTLLGAAVVGQECEVQIVFKNPLPVTLTNVVFRLEGSGLQRPKILNVGDIGGNETVTL 67 Query: 693 EEVCRPWVSGHRKLIASMSSDSLRHVYGELDVQI 726 + P G R+LIAS+ S L V+G + V + Sbjct: 68 RQSFVPVRPGPRQLIASLDSPQLSQVHGVIQVDV 101 >3T9W-A nrPDB Length = 299 Score = 34.7 bits (78), Expect = 0.15, Method: Composition-based stats. Identities = 22/81 (27%), Positives = 32/81 (39%), Gaps = 5/81 (6%) Query: 20 SNAAEDDLPTVELQ-GVVPRGVNLQEFLNVTSVHLFKERWDTNKVDHHTDKYENNKLI-- 76 +N A D PT E G + + N + HL RW N+ T +Y+ + LI Sbjct: 182 NNRAHHDAPTFEANLGERVEWIAIGHGSNFHTFHLHGHRWLDNRTGMRTSEYDPSPLIDI 241 Query: 77 --VRRGQSFYVQIDFSRPYDP 95 + G SF Q+ P Sbjct: 242 KDLNPGVSFGFQVIAGEGVGP 262 >6CG0-A nrPDB Length = 775 Score = 33.2 bits (74), Expect = 0.42, Method: Composition-based stats. Identities = 21/126 (16%), Positives = 43/126 (34%), Gaps = 1/126 (0%) Query: 475 MMDITDTYKFQEGQEEERLALETALMYGAKKPLNTEGVMKSRSNVDMDFEVENAVLGKDF 534 ++I + YK +EER + L +K +N + +M+ N + V Sbjct: 545 QLEIGEVYKHPNASKEERKRWQATLDKHLRKRMNLKPIMRMNGNFARKLMTQETV-DAVC 603 Query: 535 KLSITFRNNSHNRYTITAYLSANITFYTGVPKAEFKKETFDVTLEPLSFKKEAVLIQAGE 594 +L + + R + YL + + P E + + F + Sbjct: 604 ELIPSEERHEALRELMDLYLKMKPVWRSSCPAKECPESLCQYSFNSQRFAELLSTKFKYR 663 Query: 595 YMGQLL 600 Y G++ Sbjct: 664 YEGKIT 669 >5ZDZ-A nrPDB Length = 627 Score = 33.2 bits (74), Expect = 0.42, Method: Composition-based stats. Identities = 21/126 (16%), Positives = 43/126 (34%), Gaps = 1/126 (0%) Query: 475 MMDITDTYKFQEGQEEERLALETALMYGAKKPLNTEGVMKSRSNVDMDFEVENAVLGKDF 534 ++I + YK +EER + L +K +N + +M+ N + V Sbjct: 428 QLEIGEVYKHPNASKEERKRWQATLDKHLRKRMNLKPIMRMNGNFARKLMTQETV-DAVC 486 Query: 535 KLSITFRNNSHNRYTITAYLSANITFYTGVPKAEFKKETFDVTLEPLSFKKEAVLIQAGE 594 +L + + R + YL + + P E + + F + Sbjct: 487 ELIPSEERHEALRELMDLYLKMKPVWRSSCPAKECPESLCQYSFNSQRFAELLSTKFKYR 546 Query: 595 YMGQLL 600 Y G++ Sbjct: 547 YEGKIT 552 >3DC8-A nrPDB Length = 490 Score = 30.9 bits (68), Expect = 2.0, Method: Composition-based stats. Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 1/53 (1%) Query: 4 TSRTAFG-GRRAVPPNNSNAAEDDLPTVELQGVVPRGVNLQEFLNVTSVHLFK 55 T + FG G PN + ED +P + GV + + EF+ VTS ++ K Sbjct: 319 TEQKRFGVGDFTRIPNGTGGLEDRMPMLWTYGVATGRITMNEFVAVTSTNIAK 371 >5DJK-A nrPDB Length = 288 Score = 30.9 bits (68), Expect = 2.3, Method: Composition-based stats. Identities = 16/66 (24%), Positives = 25/66 (37%) Query: 415 VQAIKHGHVCFQFDAPFVFAEVNSDLIYITAKKDGTHVVENVDATHIGKLIVTKQIGGDG 474 +QA + G +A A + SD ++I DGT I + +G Sbjct: 82 LQAERPGDAVLSEEAHDDLARLKSDRVWIIDPLDGTREFSTPGRDDWAVHIALWRRSSNG 141 Query: 475 MMDITD 480 +ITD Sbjct: 142 QPEITD 147 >1J39-A nrPDB Length = 351 Score = 30.5 bits (67), Expect = 2.6, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 21/42 (50%) Query: 195 YLDNEKEREEYVLNDIGVIFYGEVNDIKTRSWSYGQFEDGIL 236 ++ K + Y+ DI + F ++K R W+Y E+ +L Sbjct: 86 FMAKYKSKIYYLFTDIRLPFSQSWPNVKNRPWAYLYTEEELL 127 >5HUK-A nrPDB Length = 402 Score = 30.1 bits (66), Expect = 3.4, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 24/60 (40%), Gaps = 3/60 (5%) Query: 670 GPGVTRPMKKMFREIR---PNSTVQWEEVCRPWVSGHRKLIASMSSDSLRHVYGELDVQI 726 G G T K I P+ T+ E+ P+ G +++ + SS S L V + Sbjct: 68 GQGTTLNNKHSNGTIHDRIPHRTLLMSELGVPFHLGTKQVCIAWSSSSCHDGKAWLHVCV 127 >3PLV-A nrPDB Length = 93 Score = 29.7 bits (65), Expect = 4.2, Method: Composition-based stats. Identities = 14/73 (19%), Positives = 32/73 (43%) Query: 449 GTHVVENVDATHIGKLIVTKQIGGDGMMDITDTYKFQEGQEEERLALETALMYGAKKPLN 508 G+H++E V +GK + K +G D + D Q G + ++ L+ Sbjct: 18 GSHMIEVVVNDRLGKKVRVKCLGEDSVGDFKKVLSLQIGTQPNKIVLQKGGSVLKDHISL 77 Query: 509 TEGVMKSRSNVDM 521 + + ++N+++ Sbjct: 78 EDYEVHDQTNLEL 90 >4XQ0-A nrPDB Length = 372 Score = 29.3 bits (64), Expect = 6.4, Method: Composition-based stats. Identities = 16/32 (50%), Positives = 22/32 (68%) Query: 197 DNEKEREEYVLNDIGVIFYGEVNDIKTRSWSY 228 D+E ER E VL DI ++Y E NDI +RS ++ Sbjct: 235 DHELERLEKVLKDIHAVYYEEENDISSRSGNH 266 >3EF1-A nrPDB Length = 442 Score = 29.3 bits (64), Expect = 6.5, Method: Composition-based stats. Identities = 16/32 (50%), Positives = 22/32 (68%) Query: 197 DNEKEREEYVLNDIGVIFYGEVNDIKTRSWSY 228 D+E ER E VL DI ++Y E NDI +RS ++ Sbjct: 305 DHELERLEKVLKDIHAVYYEEENDISSRSGNH 336 >3TIA-A nrPDB Length = 469 Score = 28.9 bits (63), Expect = 7.7, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 24/60 (40%), Gaps = 3/60 (5%) Query: 670 GPGVTRPMKKMFREIR---PNSTVQWEEVCRPWVSGHRKLIASMSSDSLRHVYGELDVQI 726 G G T K + P+ T+ E+ P+ G R++ + SS S L V I Sbjct: 135 GQGTTLDNKHSNDTVHDRIPHRTLLMNELGVPFHLGTRQVCIAWSSSSCHDGKAWLHVCI 194 >4K1I-A nrPDB Length = 388 Score = 28.9 bits (63), Expect = 8.3, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 24/60 (40%), Gaps = 3/60 (5%) Query: 670 GPGVTRPMKKMFREIR---PNSTVQWEEVCRPWVSGHRKLIASMSSDSLRHVYGELDVQI 726 G G T K + P+ T+ E+ P+ G R++ + SS S L V I Sbjct: 54 GQGTTLDNKHSNDTVHDRIPHRTLLMNELGVPFHLGTRQVCIAWSSSSCHDGKAWLHVCI 113 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.306 0.129 0.358 Lambda K H 0.267 0.0398 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 27,479,673 Number of Sequences: 36641 Number of extensions: 1129132 Number of successful extensions: 2670 Number of sequences better than 10.0: 17 Number of HSP's better than 10.0 without gapping: 22 Number of HSP's successfully gapped in prelim test: 8 Number of HSP's that attempted gapping in prelim test: 2601 Number of HSP's gapped (non-prelim): 31 length of query: 732 length of database: 10,336,785 effective HSP length: 104 effective length of query: 628 effective length of database: 6,526,121 effective search space: 4098403988 effective search space used: 4098403988 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.1 bits) S2: 63 (28.9 bits)