BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= P00410 (251 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 6HU9-b nrPDB 488 e-138 5Z62-B nrPDB 193 4e-50 3ASN-B nrPDB 185 1e-47 1M56-B nrPDB 151 3e-37 3EHB-B nrPDB 136 1e-32 1QLE-B nrPDB 135 1e-32 4W9Z-A nrPDB 129 1e-30 4TXV-B nrPDB 125 2e-29 2YEV-B nrPDB 87 8e-18 6HWH-P nrPDB 64 6e-11 4FA7-B nrPDB 52 2e-07 2FWL-B nrPDB 52 3e-07 5U7N-A nrPDB 37 0.012 6F7E-A nrPDB 30 1.3 5DTE-A nrPDB 30 1.4 6EL2-A nrPDB 29 2.1 3IYJ-F nrPDB 28 4.4 1QNI-A nrPDB 28 4.9 5XAN-A nrPDB 28 5.5 3SBP-A nrPDB 27 5.7 3MDY-A nrPDB 27 6.3 >6HU9-b nrPDB Length = 236 Score = 488 bits (1255), Expect = e-138, Method: Compositional matrix adjust. Identities = 236/236 (100%), Positives = 236/236 (100%) Query: 16 DVPTPYACYFQDSATPNQEGILELHDNIMFYLLVILGLVSWMLYTIVMTYSKNPIAYKYI 75 DVPTPYACYFQDSATPNQEGILELHDNIMFYLLVILGLVSWMLYTIVMTYSKNPIAYKYI Sbjct: 1 DVPTPYACYFQDSATPNQEGILELHDNIMFYLLVILGLVSWMLYTIVMTYSKNPIAYKYI 60 Query: 76 KHGQTIEVIWTIFPAVILLIIAFPSFILLYLCDEVISPAMTIKAIGYQWYWKYEYSDFIN 135 KHGQTIEVIWTIFPAVILLIIAFPSFILLYLCDEVISPAMTIKAIGYQWYWKYEYSDFIN Sbjct: 61 KHGQTIEVIWTIFPAVILLIIAFPSFILLYLCDEVISPAMTIKAIGYQWYWKYEYSDFIN 120 Query: 136 DSGETVEFESYVIPDELLEEGQLRLLDTDTSMVVPVDTHIRFVVTAADVIHDFAIPSLGI 195 DSGETVEFESYVIPDELLEEGQLRLLDTDTSMVVPVDTHIRFVVTAADVIHDFAIPSLGI Sbjct: 121 DSGETVEFESYVIPDELLEEGQLRLLDTDTSMVVPVDTHIRFVVTAADVIHDFAIPSLGI 180 Query: 196 KVDATPGRLNQVSALIQREGVFYGACSELCGTGHANMPIKIEAVSLPKFLEWLNEQ 251 KVDATPGRLNQVSALIQREGVFYGACSELCGTGHANMPIKIEAVSLPKFLEWLNEQ Sbjct: 181 KVDATPGRLNQVSALIQREGVFYGACSELCGTGHANMPIKIEAVSLPKFLEWLNEQ 236 >5Z62-B nrPDB Length = 227 Score = 193 bits (491), Expect = 4e-50, Method: Compositional matrix adjust. Identities = 94/220 (42%), Positives = 141/220 (64%), Gaps = 9/220 (4%) Query: 25 FQDSATPNQEGILELHDNIMFYLLVILGLVSWMLYTIVMTYSKNPIAYKYIKHGQTIEVI 84 QD+ +P E ++ HD + L+I+ L+ +++ + + I Q +E + Sbjct: 9 LQDATSPIMEELITFHD----HALMIIFLICFLVLYALFLTLTTKLTNTNISDAQEMETV 64 Query: 85 WTIFPAVILLIIAFPSFILLYLCDEVISPAMTIKAIGYQWYWKYEYSDFINDSGETVEFE 144 WTI PA+IL++IA PS +LY+ DEV P++TIK+IG+QWYW YEY+D+ G + F Sbjct: 65 WTILPAIILVLIALPSLRILYMTDEVNDPSLTIKSIGHQWYWTYEYTDY----GGLI-FN 119 Query: 145 SYVIPDELLEEGQLRLLDTDTSMVVPVDTHIRFVVTAADVIHDFAIPSLGIKVDATPGRL 204 SY++P LE G LRLLD D +V+P++ IR ++T+ DV+H +A+P+LG+K DA PGRL Sbjct: 120 SYMLPPLFLEPGDLRLLDVDNRVVLPIEAPIRMMITSQDVLHSWAVPTLGLKTDAIPGRL 179 Query: 205 NQVSALIQREGVFYGACSELCGTGHANMPIKIEAVSLPKF 244 NQ + R GV+YG CSE+CG H+ MPI +E + L F Sbjct: 180 NQTTFTATRPGVYYGQCSEICGANHSFMPIVLELIPLKIF 219 >3ASN-B nrPDB Length = 227 Score = 185 bits (470), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 98/228 (42%), Positives = 150/228 (65%), Gaps = 9/228 (3%) Query: 20 PYACYFQDSATPNQEGILELHDNIMFYLLVILGLVSWMLYTIVMTYSKNPIAYKYIKHGQ 79 P FQD+ +P E +L HD+ + + +I LV LY I + + + + Q Sbjct: 4 PMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLV---LYIISLMLTTK-LTHTSTMDAQ 59 Query: 80 TIEVIWTIFPAVILLIIAFPSFILLYLCDEVISPAMTIKAIGYQWYWKYEYSDFINDSGE 139 +E IWTI PA+IL++IA PS +LY+ DE+ +P++T+K +G+QWYW YEY+D+ E Sbjct: 60 EVETIWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDY-----E 114 Query: 140 TVEFESYVIPDELLEEGQLRLLDTDTSMVVPVDTHIRFVVTAADVIHDFAIPSLGIKVDA 199 + F+SY+IP L+ G+LRLL+ D +V+P++ IR +V++ DV+H +A+PSLG+K DA Sbjct: 115 DLSFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTIRMLVSSEDVLHSWAVPSLGLKTDA 174 Query: 200 TPGRLNQVSALIQREGVFYGACSELCGTGHANMPIKIEAVSLPKFLEW 247 PGRLNQ + + R G++YG CSE+CG+ H+ MPI +E V L F +W Sbjct: 175 IPGRLNQTTLMSSRPGLYYGQCSEICGSNHSFMPIVLELVPLKYFEKW 222 >1M56-B nrPDB Length = 264 Score = 151 bits (381), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 97/252 (38%), Positives = 131/252 (51%), Gaps = 25/252 (9%) Query: 18 PTPYACYFQDSATPNQEGILELHDNIMFYLLVILGLVSWM-LYTIVMTYSKNPIAYKYIK 76 P P FQ SA+P I L I+ + I V+ + LY + + K Sbjct: 11 PQPGGTGFQPSASPVATQIHWLDGFILVIIAAITIFVTLLILYAVWRFHEKRNKVPARFT 70 Query: 77 HGQTIEVIWTIFPAVILLIIAFPSFILLYLCDEVISPAMTIKAIGYQWYWKYEYSDFIND 136 H +E+ WTI P VIL+ I S +L+ E+ +T+K GYQWYW YEY D Sbjct: 71 HNSPLEIAWTIVPIVILVAIGAFSLPVLFNQQEIPEADVTVKVTGYQWYWGYEYPD---- 126 Query: 137 SGETVEFESYVI---------------PDELLEEGQLR---LLDTDTSMVVPVDTHIRFV 178 E + FESY+I +L+E G R LL TDT+MVVPV+ + Sbjct: 127 --EEISFESYMIGSPATGGDNRMSPEVEQQLIEAGYSRDEFLLATDTAMVVPVNKTVVVQ 184 Query: 179 VTAADVIHDFAIPSLGIKVDATPGRLNQVSALIQREGVFYGACSELCGTGHANMPIKIEA 238 VT ADVIH + +P+ G+K DA PGRL Q+ +REG+F+G CSELCG HA MPI ++ Sbjct: 185 VTGADVIHSWTVPAFGVKQDAVPGRLAQLWFRAEREGIFFGQCSELCGISHAYMPITVKV 244 Query: 239 VSLPKFLEWLNE 250 VS + WL + Sbjct: 245 VSEEAYAAWLEQ 256 >3EHB-B nrPDB Length = 298 Score = 136 bits (342), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 84/231 (36%), Positives = 131/231 (56%), Gaps = 14/231 (6%) Query: 25 FQDSATPNQEGILELHDNIMFYLLVILGLVSWMLYTIVMTYSK--NPIAYKYIKHGQTIE 82 FQ +++P L +++ + + V +L ++ +++ NP+ ++ H IE Sbjct: 49 FQPASSPLAHDQQWLDHFVLYIITAVTIFVCLLLLICIVRFNRRANPVPARF-THNTPIE 107 Query: 83 VIWTIFPAVILLIIAFPSFILLYLCDEVIS-PAMTIKAIGYQWYWKYEYSDFINDSGETV 141 VIWT+ P +IL+ I S +L+ E+ + P + IKAIG+QWYW YEY + + V Sbjct: 108 VIWTLVPVLILVAIGAFSLPILFRSQEMPNDPDLVIKAIGHQWYWSYEYPN------DGV 161 Query: 142 EFESYVIPDELLEEGQLR----LLDTDTSMVVPVDTHIRFVVTAADVIHDFAIPSLGIKV 197 F++ ++ E L + LL TD +VVPV + VTA DVIH + IP+ +K Sbjct: 162 AFDALMLEKEALADAGYSEDEYLLATDNPVVVPVGKKVLVQVTATDVIHAWTIPAFAVKQ 221 Query: 198 DATPGRLNQVSALIQREGVFYGACSELCGTGHANMPIKIEAVSLPKFLEWL 248 DA PGR+ Q+ + +EGV++G CSELCG HA MPI ++AVS K+ WL Sbjct: 222 DAVPGRIAQLWFSVDQEGVYFGQCSELCGINHAYMPIVVKAVSQEKYEAWL 272 >1QLE-B nrPDB Length = 252 Score = 135 bits (341), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 84/231 (36%), Positives = 131/231 (56%), Gaps = 14/231 (6%) Query: 25 FQDSATPNQEGILELHDNIMFYLLVILGLVSWMLYTIVMTYSK--NPIAYKYIKHGQTIE 82 FQ +++P L +++ + + V +L ++ +++ NP+ ++ H IE Sbjct: 20 FQPASSPLAHDQQWLDHFVLYIITAVTIFVCLLLLICIVRFNRRANPVPARF-THNTPIE 78 Query: 83 VIWTIFPAVILLIIAFPSFILLYLCDEVIS-PAMTIKAIGYQWYWKYEYSDFINDSGETV 141 VIWT+ P +IL+ I S +L+ E+ + P + IKAIG+QWYW YEY + + V Sbjct: 79 VIWTLVPVLILVAIGAFSLPILFRSQEMPNDPDLVIKAIGHQWYWSYEYPN------DGV 132 Query: 142 EFESYVIPDELLEEGQLR----LLDTDTSMVVPVDTHIRFVVTAADVIHDFAIPSLGIKV 197 F++ ++ E L + LL TD +VVPV + VTA DVIH + IP+ +K Sbjct: 133 AFDALMLEKEALADAGYSEDEYLLATDNPVVVPVGKKVLVQVTATDVIHAWTIPAFAVKQ 192 Query: 198 DATPGRLNQVSALIQREGVFYGACSELCGTGHANMPIKIEAVSLPKFLEWL 248 DA PGR+ Q+ + +EGV++G CSELCG HA MPI ++AVS K+ WL Sbjct: 193 DAVPGRIAQLWFSVDQEGVYFGQCSELCGINHAYMPIVVKAVSQEKYEAWL 243 >4W9Z-A nrPDB Length = 139 Score = 129 bits (325), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 66/134 (49%), Positives = 80/134 (59%), Gaps = 10/134 (7%) Query: 115 MTIKAIGYQWYWKYEYSDFINDSGETVEFESYVIPDELLEEGQLRLLDTDTSMVVPVDTH 174 +TIKA G QWYW Y Y D EF+S + D+ Q RLL D MVVPV+ Sbjct: 7 LTIKATGKQWYWSYAYPD-----NGKFEFDSLMAQDK-----QPRLLGVDNEMVVPVNKV 56 Query: 175 IRFVVTAADVIHDFAIPSLGIKVDATPGRLNQVSALIQREGVFYGACSELCGTGHANMPI 234 IR VT ADVIH FA+P+ G+K+DA PGRLN+ + G+FYG CSELCG HA MPI Sbjct: 57 IRVQVTGADVIHAFALPAFGVKIDAIPGRLNETWFKAAKTGMFYGQCSELCGKDHAFMPI 116 Query: 235 KIEAVSLPKFLEWL 248 I V +F W+ Sbjct: 117 AIRVVEDKEFASWV 130 >4TXV-B nrPDB Length = 159 Score = 125 bits (314), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 65/134 (48%), Positives = 79/134 (58%), Gaps = 10/134 (7%) Query: 115 MTIKAIGYQWYWKYEYSDFINDSGETVEFESYVIPDELLEEGQLRLLDTDTSMVVPVDTH 174 +TIKA G QWYW Y Y D EF+S + D+ Q RLL D MVVPV+ Sbjct: 13 LTIKATGKQWYWSYAYPD-----NGKFEFDSLMAQDK-----QPRLLGVDNEMVVPVNKV 62 Query: 175 IRFVVTAADVIHDFAIPSLGIKVDATPGRLNQVSALIQREGVFYGACSELCGTGHANMPI 234 IR VT ADVIH FA+P+ G+K+DA PGRLN+ + G+FYG CSEL G HA MPI Sbjct: 63 IRVQVTGADVIHAFALPAFGVKIDAIPGRLNETWFKAAKTGMFYGQCSELSGKDHAFMPI 122 Query: 235 KIEAVSLPKFLEWL 248 I V +F W+ Sbjct: 123 AIRVVEDKEFASWV 136 >2YEV-B nrPDB Length = 337 Score = 86.7 bits (213), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 57/215 (26%), Positives = 95/215 (44%), Gaps = 32/215 (14%) Query: 32 NQEGILELHDNIMFYLLVILGLVSWMLYTIVMTYSKNPIAYK---YIKHGQTIEVIWTIF 88 NQE + L + F+ +I +V+ L + + P + I +EV+WT+ Sbjct: 32 NQE-VAFLFPWVYFFSFLIFLVVAGSLAYVTWKFRARPEDQEEPPQIHGNDRLEVVWTLI 90 Query: 89 PAVILLIIAFPSFILLYLCDEVISPAMTIKAIGYQWYWKYEYSDFINDSGETVEFESYVI 148 P I+ ++ + L + I AM ++ GYQ++W + Y + Sbjct: 91 PLAIVFVLFGLTAKALIQVNRPIPGAMKVEVTGYQFWWDFHYPELG-------------- 136 Query: 149 PDELLEEGQLRLLDTDTSMVVPVDTHIRFVVTAADVIHDFAIPSLGIKVDATPGRLNQVS 208 L +V+P + +T+ DVIH F +P L K DA PG+ ++S Sbjct: 137 ------------LRNSNELVLPAGVPVELEITSKDVIHSFWVPGLAGKRDAIPGQTTRIS 184 Query: 209 ALIQREGVFYGACSELCGTGHANMPIKIEAVSLPK 243 + G++YG C+ELCG HA M ++ V LPK Sbjct: 185 FEPKEPGLYYGFCAELCGASHARMLFRV--VVLPK 217 >6HWH-P nrPDB Length = 341 Score = 63.9 bits (154), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 57/245 (23%), Positives = 103/245 (42%), Gaps = 46/245 (18%) Query: 49 VILGLVSW--MLYTIVMTYSKNPIAYKYIKHGQTIEVIWTIFPAVILLIIAFPSFILL-Y 105 ++ GL+ W + T ++ P + Y +E+ T+ P +I+ ++ + + ++ Sbjct: 63 IVWGLIFWTSAFHRKKATDTELPRQFGY---NMPLELTLTVIPFLIISVLFYFTVVVQER 119 Query: 106 LCDEVISPAMTIKAIGYQWYWKYEY-------SDFINDSGETVEFESYVIPDELLEE--- 155 + + +P + I +QW WK+ Y F D + E+ E +E Sbjct: 120 MMHKDPNPEVVIDVTAFQWNWKFGYQKIAFADGSFDYDGADPERKEAMTSRPEGKDEHGI 179 Query: 156 ---GQLRLLDTDTS-------------------MVVPVDTHIRFVVTAADVIHDFAIPSL 193 G +R + + +V+P I FV+ +ADVIH F +P Sbjct: 180 EKVGPIRGMTPEDRTYLNFDKIETLGTSSEIPVLVLPAGKRIEFVLNSADVIHGFWVPEF 239 Query: 194 GIKVDATP-------GRLNQVSALIQREGVFYGACSELCGTGHANMPIKIEAVSLPKFLE 246 K D P + QVS IQ+ G F G C+E+CGT HA M ++ V F Sbjct: 240 LFKRDVLPEPKANNSDNVFQVSE-IQQTGAFVGRCTEMCGTFHAMMNFEVRVVEPNDFKA 298 Query: 247 WLNEQ 251 +++++ Sbjct: 299 YIDQR 303 >4FA7-B nrPDB Length = 168 Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 24/64 (37%), Positives = 34/64 (53%) Query: 169 VPVDTHIRFVVTAADVIHDFAIPSLGIKVDATPGRLNQVSALIQREGVFYGACSELCGTG 228 VP I F +T+ DVIH F + I V+ PG ++ V +R G + C++ CG G Sbjct: 97 VPQGAEIVFKITSPDVIHGFHVEGTNINVEVLPGEVSTVRYTFKRPGEYRIICNQYCGLG 156 Query: 229 HANM 232 H NM Sbjct: 157 HQNM 160 >2FWL-B nrPDB Length = 136 Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 24/64 (37%), Positives = 34/64 (53%) Query: 169 VPVDTHIRFVVTAADVIHDFAIPSLGIKVDATPGRLNQVSALIQREGVFYGACSELCGTG 228 VP I F +T+ DVIH F + I V+ PG ++ V +R G + C++ CG G Sbjct: 65 VPQGAEIVFKITSPDVIHGFHVEGTNINVEVLPGEVSTVRYTFKRPGEYRIICNQYCGLG 124 Query: 229 HANM 232 H NM Sbjct: 125 HQNM 128 >5U7N-A nrPDB Length = 124 Score = 36.6 bits (83), Expect = 0.012, Method: Compositional matrix adjust. Identities = 18/54 (33%), Positives = 27/54 (50%) Query: 169 VPVDTHIRFVVTAADVIHDFAIPSLGIKVDATPGRLNQVSALIQREGVFYGACS 222 VP I F +T+ DVIH F + I V+ PG ++ V +R G + C+ Sbjct: 58 VPQGAEIVFKITSPDVIHGFHVEGTNINVEVLPGEVSTVRYTFKRPGEYRIICT 111 >6F7E-A nrPDB Length = 104 Score = 29.6 bits (65), Expect = 1.3, Method: Compositional matrix adjust. Identities = 13/41 (31%), Positives = 22/41 (53%) Query: 154 EEGQLRLLDTDTSMVVPVDTHIRFVVTAADVIHDFAIPSLG 194 +G + + + D + VVP D + F TA +DF + S+G Sbjct: 60 SDGTVTVRNVDHNRVVPPDGSVTFGFTATSTGNDFPVDSIG 100 >5DTE-A nrPDB Length = 311 Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust. Identities = 14/52 (26%), Positives = 24/52 (46%) Query: 28 SATPNQEGILELHDNIMFYLLVILGLVSWMLYTIVMTYSKNPIAYKYIKHGQ 79 +A PN GI +DN+ + + +V Y P+A +Y+K G+ Sbjct: 212 TANPNINGIFAANDNMAIGAVTAVENAGLAGKVLVSGYDGIPLAIEYVKQGK 263 >6EL2-A nrPDB Length = 196 Score = 28.9 bits (63), Expect = 2.1, Method: Compositional matrix adjust. Identities = 11/25 (44%), Positives = 16/25 (64%) Query: 227 TGHANMPIKIEAVSLPKFLEWLNEQ 251 T + + I +E V + KFLEW+NE Sbjct: 80 TQNLDSRIDVEKVGMKKFLEWMNEN 104 >3IYJ-F nrPDB Length = 495 Score = 27.7 bits (60), Expect = 4.4, Method: Compositional matrix adjust. Identities = 14/34 (41%), Positives = 21/34 (61%), Gaps = 1/34 (2%) Query: 211 IQREGVFYGACSE-LCGTGHANMPIKIEAVSLPK 243 +QR+ +FY A +E L GH P+ I A ++PK Sbjct: 27 VQRKSIFYHAETERLLTIGHPYYPVSIGAKTVPK 60 >1QNI-A nrPDB Length = 581 Score = 27.7 bits (60), Expect = 4.9, Method: Compositional matrix adjust. Identities = 13/50 (26%), Positives = 25/50 (50%) Query: 183 DVIHDFAIPSLGIKVDATPGRLNQVSALIQREGVFYGACSELCGTGHANM 232 DV H F + + G+ ++ +P + V+ + GV++ C+ C H M Sbjct: 523 DVTHGFCMVNHGVSMEISPQQTASVTFTAGKPGVYWYYCNWFCHALHMEM 572 >5XAN-A nrPDB Length = 750 Score = 27.7 bits (60), Expect = 5.5, Method: Compositional matrix adjust. Identities = 29/106 (27%), Positives = 49/106 (46%), Gaps = 4/106 (3%) Query: 86 TIFPAVILLIIAFPSFILLYLCDEVISPAMTIKAIGYQWYWKYEYSDFINDSGETVEFES 145 +I A+ + IA F LL L V S A + IGY SD I ++ +T+ S Sbjct: 600 SIIAAIHDVAIAMGLFSLLGLEFTVASVAALLTLIGYSLNDSIIVSDRIRENMKTMRGHS 659 Query: 146 YV-IPDELLEEGQLRLLDTDTSMVVPVDTHIRFVVTAADVIHDFAI 190 Y I + + + R + T S ++P+ I ++ V+ DF++ Sbjct: 660 YREIVNAAINQTLSRTVMTSVSTMLPL---ISLLIFGGPVLRDFSL 702 >3SBP-A nrPDB Length = 638 Score = 27.3 bits (59), Expect = 5.7, Method: Compositional matrix adjust. Identities = 12/50 (24%), Positives = 26/50 (52%) Query: 183 DVIHDFAIPSLGIKVDATPGRLNQVSALIQREGVFYGACSELCGTGHANM 232 DV H F + + G+ ++ +P + + ++ + + G+ + CS C H M Sbjct: 580 DVSHGFVVVNHGVSMEISPQQTSSITFVADKPGLHWYYCSWFCHALHMEM 629 >3MDY-A nrPDB Length = 337 Score = 27.3 bits (59), Expect = 6.3, Method: Compositional matrix adjust. Identities = 26/96 (27%), Positives = 44/96 (45%), Gaps = 12/96 (12%) Query: 19 TPYACYFQDSATPNQEGILELHDNIMFYLLV-ILGLVSWMLYTIVMTYSKNPIAYKYIKH 77 T A +F++ T + +L H+NI+ ++ I G SW ++ Y +N Y Y+K Sbjct: 71 TEEASWFRE--TEIYQTVLMRHENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYLKS 128 Query: 78 GQTIEVIWTIFPAVILLIIAFPSFI-LLYLCDEVIS 112 T A +L +A+ S L +L E+ S Sbjct: 129 --------TTLDAKSMLKLAYSSVSGLCHLHTEIFS 156 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 6HU9-b nrPDB 322 8e-89 1M56-B nrPDB 267 3e-72 5Z62-B nrPDB 260 3e-70 3EHB-B nrPDB 260 4e-70 3ASN-B nrPDB 258 2e-69 1QLE-B nrPDB 258 2e-69 2YEV-B nrPDB 220 4e-58 6HWH-P nrPDB 212 1e-55 4W9Z-A nrPDB 188 2e-48 4TXV-B nrPDB 186 8e-48 2FWL-B nrPDB 96 1e-20 4FA7-B nrPDB 96 1e-20 Sequences not found previously or not previously below threshold: 5U7N-A nrPDB 77 1e-14 1FFT-B nrPDB 74 6e-14 1CYW-A nrPDB 61 7e-10 3SBP-A nrPDB 47 9e-06 5I5I-A nrPDB 46 1e-05 1QNI-A nrPDB 46 2e-05 2IWK-A nrPDB 43 1e-04 1FWX-A nrPDB 43 1e-04 1CC3-A nrPDB 33 0.14 3AG6-A nrPDB 30 0.63 6HBE-A nrPDB 30 0.73 3QFK-A nrPDB 29 1.6 4KJS-A nrPDB 29 2.8 5TB7-A nrPDB 29 3.1 3L7R-A nrPDB 28 3.1 4AWE-A nrPDB 28 3.6 2VMJ-A nrPDB 28 3.9 3RRA-A nrPDB 28 5.0 2ZOO-A nrPDB 27 6.2 3X1F-A nrPDB 27 6.9 2Y1A-A nrPDB 27 8.0 5AKR-A nrPDB 27 8.7 6O7X-a nrPDB 27 9.5 4NAK-A nrPDB 27 9.9 2AGC-A nrPDB 27 9.9 >6HU9-b nrPDB Length = 236 Score = 322 bits (825), Expect = 8e-89, Method: Composition-based stats. Identities = 236/236 (100%), Positives = 236/236 (100%) Query: 16 DVPTPYACYFQDSATPNQEGILELHDNIMFYLLVILGLVSWMLYTIVMTYSKNPIAYKYI 75 DVPTPYACYFQDSATPNQEGILELHDNIMFYLLVILGLVSWMLYTIVMTYSKNPIAYKYI Sbjct: 1 DVPTPYACYFQDSATPNQEGILELHDNIMFYLLVILGLVSWMLYTIVMTYSKNPIAYKYI 60 Query: 76 KHGQTIEVIWTIFPAVILLIIAFPSFILLYLCDEVISPAMTIKAIGYQWYWKYEYSDFIN 135 KHGQTIEVIWTIFPAVILLIIAFPSFILLYLCDEVISPAMTIKAIGYQWYWKYEYSDFIN Sbjct: 61 KHGQTIEVIWTIFPAVILLIIAFPSFILLYLCDEVISPAMTIKAIGYQWYWKYEYSDFIN 120 Query: 136 DSGETVEFESYVIPDELLEEGQLRLLDTDTSMVVPVDTHIRFVVTAADVIHDFAIPSLGI 195 DSGETVEFESYVIPDELLEEGQLRLLDTDTSMVVPVDTHIRFVVTAADVIHDFAIPSLGI Sbjct: 121 DSGETVEFESYVIPDELLEEGQLRLLDTDTSMVVPVDTHIRFVVTAADVIHDFAIPSLGI 180 Query: 196 KVDATPGRLNQVSALIQREGVFYGACSELCGTGHANMPIKIEAVSLPKFLEWLNEQ 251 KVDATPGRLNQVSALIQREGVFYGACSELCGTGHANMPIKIEAVSLPKFLEWLNEQ Sbjct: 181 KVDATPGRLNQVSALIQREGVFYGACSELCGTGHANMPIKIEAVSLPKFLEWLNEQ 236 >1M56-B nrPDB Length = 264 Score = 267 bits (683), Expect = 3e-72, Method: Composition-based stats. Identities = 97/252 (38%), Positives = 131/252 (51%), Gaps = 25/252 (9%) Query: 18 PTPYACYFQDSATPNQEGILELHDNIMFYLLVILGLVSWM-LYTIVMTYSKNPIAYKYIK 76 P P FQ SA+P I L I+ + I V+ + LY + + K Sbjct: 11 PQPGGTGFQPSASPVATQIHWLDGFILVIIAAITIFVTLLILYAVWRFHEKRNKVPARFT 70 Query: 77 HGQTIEVIWTIFPAVILLIIAFPSFILLYLCDEVISPAMTIKAIGYQWYWKYEYSDFIND 136 H +E+ WTI P VIL+ I S +L+ E+ +T+K GYQWYW YEY D Sbjct: 71 HNSPLEIAWTIVPIVILVAIGAFSLPVLFNQQEIPEADVTVKVTGYQWYWGYEYPD---- 126 Query: 137 SGETVEFESYVI---------------PDELLEEGQLR---LLDTDTSMVVPVDTHIRFV 178 E + FESY+I +L+E G R LL TDT+MVVPV+ + Sbjct: 127 --EEISFESYMIGSPATGGDNRMSPEVEQQLIEAGYSRDEFLLATDTAMVVPVNKTVVVQ 184 Query: 179 VTAADVIHDFAIPSLGIKVDATPGRLNQVSALIQREGVFYGACSELCGTGHANMPIKIEA 238 VT ADVIH + +P+ G+K DA PGRL Q+ +REG+F+G CSELCG HA MPI ++ Sbjct: 185 VTGADVIHSWTVPAFGVKQDAVPGRLAQLWFRAEREGIFFGQCSELCGISHAYMPITVKV 244 Query: 239 VSLPKFLEWLNE 250 VS + WL + Sbjct: 245 VSEEAYAAWLEQ 256 >5Z62-B nrPDB Length = 227 Score = 260 bits (665), Expect = 3e-70, Method: Composition-based stats. Identities = 91/224 (40%), Positives = 138/224 (61%), Gaps = 9/224 (4%) Query: 22 ACYFQDSATPNQEGILELHDNIMFYLLVILGLVSWMLYTIVMTYSKNPIAYKYIKHGQTI 81 QD+ +P E ++ HD+ + + L+ +++ + + I Q + Sbjct: 6 QVGLQDATSPIMEELITFHDHALMIIF----LICFLVLYALFLTLTTKLTNTNISDAQEM 61 Query: 82 EVIWTIFPAVILLIIAFPSFILLYLCDEVISPAMTIKAIGYQWYWKYEYSDFINDSGETV 141 E +WTI PA+IL++IA PS +LY+ DEV P++TIK+IG+QWYW YEY+D+ + Sbjct: 62 ETVWTILPAIILVLIALPSLRILYMTDEVNDPSLTIKSIGHQWYWTYEYTDY-----GGL 116 Query: 142 EFESYVIPDELLEEGQLRLLDTDTSMVVPVDTHIRFVVTAADVIHDFAIPSLGIKVDATP 201 F SY++P LE G LRLLD D +V+P++ IR ++T+ DV+H +A+P+LG+K DA P Sbjct: 117 IFNSYMLPPLFLEPGDLRLLDVDNRVVLPIEAPIRMMITSQDVLHSWAVPTLGLKTDAIP 176 Query: 202 GRLNQVSALIQREGVFYGACSELCGTGHANMPIKIEAVSLPKFL 245 GRLNQ + R GV+YG CSE+CG H+ MPI +E + L F Sbjct: 177 GRLNQTTFTATRPGVYYGQCSEICGANHSFMPIVLELIPLKIFE 220 >3EHB-B nrPDB Length = 298 Score = 260 bits (664), Expect = 4e-70, Method: Composition-based stats. Identities = 83/237 (35%), Positives = 127/237 (53%), Gaps = 12/237 (5%) Query: 18 PTPYACYFQDSATPNQEGILELHDNIMFYLLVILGLVSWMLYTIVMTYSKNPIA-YKYIK 76 P FQ +++P L +++ + + V +L ++ +++ Sbjct: 42 PVNGGMNFQPASSPLAHDQQWLDHFVLYIITAVTIFVCLLLLICIVRFNRRANPVPARFT 101 Query: 77 HGQTIEVIWTIFPAVILLIIAFPSFILLYLCDEVIS-PAMTIKAIGYQWYWKYEYSDFIN 135 H IEVIWT+ P +IL+ I S +L+ E+ + P + IKAIG+QWYW YEY + Sbjct: 102 HNTPIEVIWTLVPVLILVAIGAFSLPILFRSQEMPNDPDLVIKAIGHQWYWSYEYPN--- 158 Query: 136 DSGETVEFESYVIPDELLEEGQLR----LLDTDTSMVVPVDTHIRFVVTAADVIHDFAIP 191 + V F++ ++ E L + LL TD +VVPV + VTA DVIH + IP Sbjct: 159 ---DGVAFDALMLEKEALADAGYSEDEYLLATDNPVVVPVGKKVLVQVTATDVIHAWTIP 215 Query: 192 SLGIKVDATPGRLNQVSALIQREGVFYGACSELCGTGHANMPIKIEAVSLPKFLEWL 248 + +K DA PGR+ Q+ + +EGV++G CSELCG HA MPI ++AVS K+ WL Sbjct: 216 AFAVKQDAVPGRIAQLWFSVDQEGVYFGQCSELCGINHAYMPIVVKAVSQEKYEAWL 272 >3ASN-B nrPDB Length = 227 Score = 258 bits (659), Expect = 2e-69, Method: Composition-based stats. Identities = 96/228 (42%), Positives = 147/228 (64%), Gaps = 9/228 (3%) Query: 20 PYACYFQDSATPNQEGILELHDNIMFYLLVILGLVSWMLYTIVMTYSKNPIAYKYIKHGQ 79 P FQD+ +P E +L HD+ + + +I LV I+ + + Q Sbjct: 4 PMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLV----LYIISLMLTTKLTHTSTMDAQ 59 Query: 80 TIEVIWTIFPAVILLIIAFPSFILLYLCDEVISPAMTIKAIGYQWYWKYEYSDFINDSGE 139 +E IWTI PA+IL++IA PS +LY+ DE+ +P++T+K +G+QWYW YEY+D+ E Sbjct: 60 EVETIWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDY-----E 114 Query: 140 TVEFESYVIPDELLEEGQLRLLDTDTSMVVPVDTHIRFVVTAADVIHDFAIPSLGIKVDA 199 + F+SY+IP L+ G+LRLL+ D +V+P++ IR +V++ DV+H +A+PSLG+K DA Sbjct: 115 DLSFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTIRMLVSSEDVLHSWAVPSLGLKTDA 174 Query: 200 TPGRLNQVSALIQREGVFYGACSELCGTGHANMPIKIEAVSLPKFLEW 247 PGRLNQ + + R G++YG CSE+CG+ H+ MPI +E V L F +W Sbjct: 175 IPGRLNQTTLMSSRPGLYYGQCSEICGSNHSFMPIVLELVPLKYFEKW 222 >1QLE-B nrPDB Length = 252 Score = 258 bits (658), Expect = 2e-69, Method: Composition-based stats. Identities = 83/237 (35%), Positives = 127/237 (53%), Gaps = 12/237 (5%) Query: 18 PTPYACYFQDSATPNQEGILELHDNIMFYLLVILGLVSWMLYTIVMTYSKNPIA-YKYIK 76 P FQ +++P L +++ + + V +L ++ +++ Sbjct: 13 PVNGGMNFQPASSPLAHDQQWLDHFVLYIITAVTIFVCLLLLICIVRFNRRANPVPARFT 72 Query: 77 HGQTIEVIWTIFPAVILLIIAFPSFILLYLCDEVIS-PAMTIKAIGYQWYWKYEYSDFIN 135 H IEVIWT+ P +IL+ I S +L+ E+ + P + IKAIG+QWYW YEY + Sbjct: 73 HNTPIEVIWTLVPVLILVAIGAFSLPILFRSQEMPNDPDLVIKAIGHQWYWSYEYPN--- 129 Query: 136 DSGETVEFESYVIPDELLEEGQLR----LLDTDTSMVVPVDTHIRFVVTAADVIHDFAIP 191 + V F++ ++ E L + LL TD +VVPV + VTA DVIH + IP Sbjct: 130 ---DGVAFDALMLEKEALADAGYSEDEYLLATDNPVVVPVGKKVLVQVTATDVIHAWTIP 186 Query: 192 SLGIKVDATPGRLNQVSALIQREGVFYGACSELCGTGHANMPIKIEAVSLPKFLEWL 248 + +K DA PGR+ Q+ + +EGV++G CSELCG HA MPI ++AVS K+ WL Sbjct: 187 AFAVKQDAVPGRIAQLWFSVDQEGVYFGQCSELCGINHAYMPIVVKAVSQEKYEAWL 243 >2YEV-B nrPDB Length = 337 Score = 220 bits (561), Expect = 4e-58, Method: Composition-based stats. Identities = 54/227 (23%), Positives = 97/227 (42%), Gaps = 30/227 (13%) Query: 26 QDSATPNQEGILELHDNIMFYLLVILGLVSWMLYTIVMTYSKNPIAYK---YIKHGQTIE 82 + NQE + L + F+ +I +V+ L + + P + I +E Sbjct: 26 HPGGSFNQE-VAFLFPWVYFFSFLIFLVVAGSLAYVTWKFRARPEDQEEPPQIHGNDRLE 84 Query: 83 VIWTIFPAVILLIIAFPSFILLYLCDEVISPAMTIKAIGYQWYWKYEYSDFINDSGETVE 142 V+WT+ P I+ ++ + L + I AM ++ GYQ++W + Y + Sbjct: 85 VVWTLIPLAIVFVLFGLTAKALIQVNRPIPGAMKVEVTGYQFWWDFHYPELG-------- 136 Query: 143 FESYVIPDELLEEGQLRLLDTDTSMVVPVDTHIRFVVTAADVIHDFAIPSLGIKVDATPG 202 L +V+P + +T+ DVIH F +P L K DA PG Sbjct: 137 ------------------LRNSNELVLPAGVPVELEITSKDVIHSFWVPGLAGKRDAIPG 178 Query: 203 RLNQVSALIQREGVFYGACSELCGTGHANMPIKIEAVSLPKFLEWLN 249 + ++S + G++YG C+ELCG HA M ++ + +F ++ Sbjct: 179 QTTRISFEPKEPGLYYGFCAELCGASHARMLFRVVVLPKEEFDRFVE 225 >6HWH-P nrPDB Length = 341 Score = 212 bits (539), Expect = 1e-55, Method: Composition-based stats. Identities = 62/273 (22%), Positives = 111/273 (40%), Gaps = 50/273 (18%) Query: 23 CYFQDSATPNQEGILELHDNIMFYL--LVILGLVSW--MLYTIVMTYSKNPIAYKYIKHG 78 A N+E L + I + ++ GL+ W + T ++ P + Y Sbjct: 37 TGITPEAKLNRE--LWIGSVIASFAVGAIVWGLIFWTSAFHRKKATDTELPRQFGY---N 91 Query: 79 QTIEVIWTIFPAVILLIIAFPSFILL-YLCDEVISPAMTIKAIGYQWYWKYEY------- 130 +E+ T+ P +I+ ++ + + ++ + + +P + I +QW WK+ Y Sbjct: 92 MPLELTLTVIPFLIISVLFYFTVVVQERMMHKDPNPEVVIDVTAFQWNWKFGYQKIAFAD 151 Query: 131 SDFINDSGETVEFESYVIPDELLEE------GQLRLLDTDTS------------------ 166 F D + E+ E +E G +R + + Sbjct: 152 GSFDYDGADPERKEAMTSRPEGKDEHGIEKVGPIRGMTPEDRTYLNFDKIETLGTSSEIP 211 Query: 167 -MVVPVDTHIRFVVTAADVIHDFAIPSLGIKVDATP-------GRLNQVSALIQREGVFY 218 +V+P I FV+ +ADVIH F +P K D P + QVS IQ+ G F Sbjct: 212 VLVLPAGKRIEFVLNSADVIHGFWVPEFLFKRDVLPEPKANNSDNVFQVS-EIQQTGAFV 270 Query: 219 GACSELCGTGHANMPIKIEAVSLPKFLEWLNEQ 251 G C+E+CGT HA M ++ V F +++++ Sbjct: 271 GRCTEMCGTFHAMMNFEVRVVEPNDFKAYIDQR 303 >4W9Z-A nrPDB Length = 139 Score = 188 bits (477), Expect = 2e-48, Method: Composition-based stats. Identities = 67/140 (47%), Positives = 81/140 (57%), Gaps = 10/140 (7%) Query: 110 VISPAMTIKAIGYQWYWKYEYSDFINDSGETVEFESYVIPDELLEEGQLRLLDTDTSMVV 169 V +TIKA G QWYW Y Y D EF+S + D+ Q RLL D MVV Sbjct: 2 VPKADLTIKATGKQWYWSYAYPD-----NGKFEFDSLMAQDK-----QPRLLGVDNEMVV 51 Query: 170 PVDTHIRFVVTAADVIHDFAIPSLGIKVDATPGRLNQVSALIQREGVFYGACSELCGTGH 229 PV+ IR VT ADVIH FA+P+ G+K+DA PGRLN+ + G+FYG CSELCG H Sbjct: 52 PVNKVIRVQVTGADVIHAFALPAFGVKIDAIPGRLNETWFKAAKTGMFYGQCSELCGKDH 111 Query: 230 ANMPIKIEAVSLPKFLEWLN 249 A MPI I V +F W+ Sbjct: 112 AFMPIAIRVVEDKEFASWVE 131 >4TXV-B nrPDB Length = 159 Score = 186 bits (472), Expect = 8e-48, Method: Composition-based stats. Identities = 67/145 (46%), Positives = 83/145 (57%), Gaps = 10/145 (6%) Query: 105 YLCDEVISPAMTIKAIGYQWYWKYEYSDFINDSGETVEFESYVIPDELLEEGQLRLLDTD 164 +L +V +TIKA G QWYW Y Y D EF+S + D+ Q RLL D Sbjct: 3 FLELDVPKADLTIKATGKQWYWSYAYPD-----NGKFEFDSLMAQDK-----QPRLLGVD 52 Query: 165 TSMVVPVDTHIRFVVTAADVIHDFAIPSLGIKVDATPGRLNQVSALIQREGVFYGACSEL 224 MVVPV+ IR VT ADVIH FA+P+ G+K+DA PGRLN+ + G+FYG CSEL Sbjct: 53 NEMVVPVNKVIRVQVTGADVIHAFALPAFGVKIDAIPGRLNETWFKAAKTGMFYGQCSEL 112 Query: 225 CGTGHANMPIKIEAVSLPKFLEWLN 249 G HA MPI I V +F W+ Sbjct: 113 SGKDHAFMPIAIRVVEDKEFASWVE 137 >2FWL-B nrPDB Length = 136 Score = 96.3 bits (238), Expect = 1e-20, Method: Composition-based stats. Identities = 24/68 (35%), Positives = 35/68 (51%) Query: 165 TSMVVPVDTHIRFVVTAADVIHDFAIPSLGIKVDATPGRLNQVSALIQREGVFYGACSEL 224 + VP I F +T+ DVIH F + I V+ PG ++ V +R G + C++ Sbjct: 61 NPIEVPQGAEIVFKITSPDVIHGFHVEGTNINVEVLPGEVSTVRYTFKRPGEYRIICNQY 120 Query: 225 CGTGHANM 232 CG GH NM Sbjct: 121 CGLGHQNM 128 >4FA7-B nrPDB Length = 168 Score = 96.3 bits (238), Expect = 1e-20, Method: Composition-based stats. Identities = 24/68 (35%), Positives = 35/68 (51%) Query: 165 TSMVVPVDTHIRFVVTAADVIHDFAIPSLGIKVDATPGRLNQVSALIQREGVFYGACSEL 224 + VP I F +T+ DVIH F + I V+ PG ++ V +R G + C++ Sbjct: 93 NPIEVPQGAEIVFKITSPDVIHGFHVEGTNINVEVLPGEVSTVRYTFKRPGEYRIICNQY 152 Query: 225 CGTGHANM 232 CG GH NM Sbjct: 153 CGLGHQNM 160 >5U7N-A nrPDB Length = 124 Score = 76.7 bits (187), Expect = 1e-14, Method: Composition-based stats. Identities = 20/68 (29%), Positives = 30/68 (44%), Gaps = 5/68 (7%) Query: 165 TSMVVPVDTHIRFVVTAADVIHDFAIPSLGIKVDATPGRLNQVSALIQREGVFYGACSEL 224 + VP I F +T+ DVIH F + I V+ PG ++ V +R G + C+ Sbjct: 54 NPIEVPQGAEIVFKITSPDVIHGFHVEGTNINVEVLPGEVSTVRYTFKRPGEYRIICTP- 112 Query: 225 CGTGHANM 232 H M Sbjct: 113 ----HPFM 116 >1FFT-B nrPDB Length = 315 Score = 74.0 bits (180), Expect = 6e-14, Method: Composition-based stats. Identities = 41/214 (19%), Positives = 82/214 (38%), Gaps = 36/214 (16%) Query: 43 IMFYLLVILGLVSWMLYTIVMTYSKNPIAYKYIKHGQTIE-VIWTIFPAVILLIIAFPSF 101 +M +++ L++ +K+ H +E V+WT+ P +I++ +A ++ Sbjct: 50 LMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTV-PILIIIFLAVLTW 108 Query: 102 ILLYLCDEVISP------AMTIKAIGYQWYWKYEYSDFINDSGETVEFESYVIPDELLEE 155 + E P +TI+ + W W + Y + Sbjct: 109 KTTHAL-EPSKPLAHDEKPITIEVVSMDWKWFFIYPE----------------------- 144 Query: 156 GQLRLLDTDTSMVVPVDTHIRFVVTAADVIHDFAIPSLGIKVDATPGRLNQVSALIQREG 215 + + T + P +T + F VT+ V++ F IP LG ++ A G ++ + G Sbjct: 145 ---QGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPG 201 Query: 216 VFYGACSELCGTGHANMPIKIEAVSLP-KFLEWL 248 + G + G G + M K A F +W+ Sbjct: 202 TYDGISASYSGPGFSGMKFKAIATPDRAAFDQWV 235 >1CYW-A nrPDB Length = 205 Score = 60.5 bits (145), Expect = 7e-10, Method: Composition-based stats. Identities = 28/135 (20%), Positives = 51/135 (37%), Gaps = 27/135 (20%) Query: 115 MTIKAIGYQWYWKYEYSDFINDSGETVEFESYVIPDELLEEGQLRLLDTDTSMVVPVDTH 174 +TI+ + W W + Y + + + T + P +T Sbjct: 17 ITIEVVSMDWKWFFIYPE--------------------------QGIATVNEIAFPANTP 50 Query: 175 IRFVVTAADVIHDFAIPSLGIKVDATPGRLNQVSALIQREGVFYGACSELCGTGHANMPI 234 + F VT+ V++ F IP LG ++ A G ++ + G + G + G G + M Sbjct: 51 VYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKF 110 Query: 235 KIEAVSLP-KFLEWL 248 K A F +W+ Sbjct: 111 KAIATPDRAAFDQWV 125 >3SBP-A nrPDB Length = 638 Score = 46.7 bits (109), Expect = 9e-06, Method: Composition-based stats. Identities = 14/71 (19%), Positives = 30/71 (42%), Gaps = 4/71 (5%) Query: 166 SMVVPVDTHIRFVVTA----ADVIHDFAIPSLGIKVDATPGRLNQVSALIQREGVFYGAC 221 V + +T DV H F + + G+ ++ +P + + ++ + + G+ + C Sbjct: 559 EFTVKQGDEVTVTITNIDQIEDVSHGFVVVNHGVSMEISPQQTSSITFVADKPGLHWYYC 618 Query: 222 SELCGTGHANM 232 S C H M Sbjct: 619 SWFCHALHMEM 629 >5I5I-A nrPDB Length = 636 Score = 46.3 bits (108), Expect = 1e-05, Method: Composition-based stats. Identities = 23/102 (22%), Positives = 42/102 (41%), Gaps = 7/102 (6%) Query: 138 GETVEFESYVIPDELLEEGQLRLLDTD---TSMVVPVDTHIRFVVTA----ADVIHDFAI 190 G T+E ++ VI D + + + V + + VVT DV H F + Sbjct: 519 GVTLEMDNKVIRDGNKVRVYMTSIAPNFGMNEFKVKLGDEVTVVVTNLDQVEDVTHGFCM 578 Query: 191 PSLGIKVDATPGRLNQVSALIQREGVFYGACSELCGTGHANM 232 + G++++ P V+ + + GV + C+ C H M Sbjct: 579 TNHGVQMEVAPQATASVTFIANKPGVQWYYCNWFCHALHMEM 620 >1QNI-A nrPDB Length = 581 Score = 45.9 bits (107), Expect = 2e-05, Method: Composition-based stats. Identities = 15/68 (22%), Positives = 29/68 (42%), Gaps = 4/68 (5%) Query: 169 VPVDTHIRFVVTA----ADVIHDFAIPSLGIKVDATPGRLNQVSALIQREGVFYGACSEL 224 V + +T DV H F + + G+ ++ +P + V+ + GV++ C+ Sbjct: 505 VKEGDEVTVYITNLDMVEDVTHGFCMVNHGVSMEISPQQTASVTFTAGKPGVYWYYCNWF 564 Query: 225 CGTGHANM 232 C H M Sbjct: 565 CHALHMEM 572 >2IWK-A nrPDB Length = 642 Score = 43.2 bits (100), Expect = 1e-04, Method: Composition-based stats. Identities = 17/71 (23%), Positives = 30/71 (42%), Gaps = 4/71 (5%) Query: 166 SMVVPVDTHIRFVVTAADVI----HDFAIPSLGIKVDATPGRLNQVSALIQREGVFYGAC 221 S V + +VT D I H F + + G+ ++ P + + V+ + GV++ C Sbjct: 561 SFTVKEGDEVTVIVTNLDEIDDLTHGFTMGNHGVAMEVGPQQTSSVTFVAANPGVYWYYC 620 Query: 222 SELCGTGHANM 232 C H M Sbjct: 621 QWFCHALHMEM 631 >1FWX-A nrPDB Length = 595 Score = 43.2 bits (100), Expect = 1e-04, Method: Composition-based stats. Identities = 23/125 (18%), Positives = 43/125 (34%), Gaps = 8/125 (6%) Query: 126 WKYEYSDFINDSGETVEFESYVIPDELLEEGQLRLLDTD---TSMVVPVDTHIRFVVTAA 182 W + D + + VI D + + S V + +VT Sbjct: 471 WAETRAQAEADGVDIDNWTEEVIRDGNKVRVYMSSVAPSFSIESFTVKEGDEVTVIVTNL 530 Query: 183 DVI----HDFAIPSLGIKVDATPGRLNQVSALIQREGVFYGACSELCGTGHANMPIKIEA 238 D I H F + + G+ ++ P + V+ + GV++ C C H M ++ Sbjct: 531 DEIDDLTHGFTMGNYGVAMEIGPQMTSSVTFVAANPGVYWYYCQWFCHALHMEMRGRM-L 589 Query: 239 VSLPK 243 V + Sbjct: 590 VEPKE 594 >1CC3-A nrPDB Length = 130 Score = 32.8 bits (73), Expect = 0.14, Method: Composition-based stats. Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 3/34 (8%) Query: 202 GRLNQVSALIQR--EGV-FYGACSELCGTGHANM 232 G + V+ + + EG + CSELCG HA M Sbjct: 90 GEKDSVTFDVSKLKEGEQYMFFCSELCGINHALM 123 >3AG6-A nrPDB Length = 283 Score = 30.5 bits (67), Expect = 0.63, Method: Composition-based stats. Identities = 21/84 (25%), Positives = 29/84 (34%), Gaps = 6/84 (7%) Query: 150 DELLEEGQLRLLDTDTSMVVPVDTHIRFVVTAADVIHDFAIPSLGIKVDATPGRLNQVSA 209 + R +D D +V V I F D+ LGI V P L V Sbjct: 65 PNEDFDAYPRQIDKDLELVSEVGADIVFHPAVEDMYPG----ELGIDVKVGP--LADVLE 118 Query: 210 LIQREGVFYGACSELCGTGHANMP 233 +R G F G + + + MP Sbjct: 119 GAKRPGHFDGVVTVVNKLFNIVMP 142 >6HBE-A nrPDB Length = 451 Score = 30.5 bits (67), Expect = 0.73, Method: Composition-based stats. Identities = 16/78 (20%), Positives = 26/78 (33%), Gaps = 9/78 (11%) Query: 161 LDTDTSMVVPVDTHIRFVVTAAD-VIHDFAIPSLGIKV-----DATPGRLNQVSALIQRE 214 + +VV + + D V H +I + + + PG + S Sbjct: 49 MSPGPMLVVEEGDTVHITLRNLDNVTHGLSIHAANTQTSRFLGNVQPGETREFSFTADFP 108 Query: 215 GVFYGACSELCGTGHANM 232 GVF C+ GH M Sbjct: 109 GVFMYHCAP---GGHGIM 123 >3QFK-A nrPDB Length = 527 Score = 29.3 bits (64), Expect = 1.6, Method: Composition-based stats. Identities = 23/99 (23%), Positives = 39/99 (39%), Gaps = 8/99 (8%) Query: 125 YWKYEYSDFINDSGETVEFESYVIPDELLEEGQLRLLDTDTSMV-----VPVDTHIRFVV 179 + YE + D FE+ V P LL+ + V + + VV Sbjct: 316 WLDYEITTLPYDMTINHAFEARVAPHPFTNFMNYALLEKSDADVACTALFDSASGFKQVV 375 Query: 180 TAADVIHDFAIPSLGIKVDATPGRLNQVSALIQREGVFY 218 T DVI+++ P+ KV A G ++ I+R ++ Sbjct: 376 TMRDVINNYPFPNT-FKVLAVSG--AKLKEAIERSAEYF 411 >4KJS-A nrPDB Length = 351 Score = 28.6 bits (62), Expect = 2.8, Method: Composition-based stats. Identities = 16/80 (20%), Positives = 32/80 (40%), Gaps = 1/80 (1%) Query: 32 NQEGILELHDNIMFYLLVILGLVSWMLYTIVMTYSKNPIAYKYIKHGQTIEVIWTIFPAV 91 E I ++ I+G + I+M + I G T+++ + P + Sbjct: 231 VAEQFGWSELFIGVIIVAIVGNAAEHASAIIMAFKNKMDIAVEIAVGSTLQIAMFVAPVL 290 Query: 92 ILLIIAFP-SFILLYLCDEV 110 ++ I FP S L++ E+ Sbjct: 291 VICSIFFPTSMPLVFTLPEL 310 >5TB7-A nrPDB Length = 337 Score = 28.6 bits (62), Expect = 3.1, Method: Composition-based stats. Identities = 11/52 (21%), Positives = 22/52 (42%), Gaps = 1/52 (1%) Query: 201 PGRLNQVSALIQREGVFYGACS-ELCGTGHANMPIKIEAVSLPKFLEWLNEQ 251 PGR + S + G++ C+ G AN + V + L ++++ Sbjct: 115 PGRTSTFSFKALQPGLYIYHCAVAPVGMHIANGMYGLILVEPKEGLPKVDKE 166 >3L7R-A nrPDB Length = 779 Score = 28.2 bits (61), Expect = 3.1, Method: Composition-based stats. Identities = 18/102 (17%), Positives = 34/102 (33%), Gaps = 6/102 (5%) Query: 100 SFILLYLCDEVISPAMTIKAIGYQWYWKYEYSDFINDSGETVEFESYVIPDELLEEGQLR 159 + L D + +T W +E +D D + +LLE + Sbjct: 560 TVYAQSLTDRPVKGMLTGPITIT--NWSFERTDIPRDQLFNQIGLAIKDEIKLLENAGIA 617 Query: 160 LLDTDTSMVVPVDTHIRFVVTAA---DVIHDFAIPSLGIKVD 198 ++ D + +R A D +H F I + +K + Sbjct: 618 IIQVD-EAALREGLPLRKSKQKAYLDDAVHAFHIATSSVKDE 658 >4AWE-A nrPDB Length = 387 Score = 28.2 bits (61), Expect = 3.6, Method: Composition-based stats. Identities = 8/30 (26%), Positives = 12/30 (40%) Query: 125 YWKYEYSDFINDSGETVEFESYVIPDELLE 154 YW++ Y + F Y+ DE E Sbjct: 343 YWQFGYGGYSYGRNHDDSFTIYLEDDEAKE 372 >2VMJ-A nrPDB Length = 329 Score = 28.2 bits (61), Expect = 3.9, Method: Composition-based stats. Identities = 8/44 (18%), Positives = 13/44 (29%), Gaps = 5/44 (11%) Query: 197 VDATPGRLNQVSALIQREGVFYGACSELCGTGHANMPIKIEAVS 240 + PG + R G F C+ H M + + Sbjct: 107 TNVNPGEQATLRFKADRSGTFVYHCTP-----HPFMSGTLMVLP 145 >3RRA-A nrPDB Length = 405 Score = 27.8 bits (60), Expect = 5.0, Method: Composition-based stats. Identities = 12/48 (25%), Positives = 21/48 (43%), Gaps = 3/48 (6%) Query: 201 PGRLNQVSALIQREGVFYG---ACSELCGTGHANMPIKIEAVSLPKFL 245 P R+N + + R G + G S + G A IK + + +P + Sbjct: 58 PSRINDLWQTMYRAGFYRGGPILMSAIAGIDQALWDIKGKVLGVPVYE 105 >2ZOO-A nrPDB Length = 442 Score = 27.4 bits (59), Expect = 6.2, Method: Composition-based stats. Identities = 13/69 (18%), Positives = 25/69 (36%), Gaps = 2/69 (2%) Query: 185 IHDFAIPSLGIKVDAT-PGRLNQVSALIQREGVFYGACSEL-CGTGHANMPIKIEAVSLP 242 +H P G + T PG + + G++ C+ G AN + V Sbjct: 88 LHAVTGPGGGAESSFTAPGHTSTFNFKALNPGLYIYHCATAPVGMHIANGMYGLILVEPK 147 Query: 243 KFLEWLNEQ 251 + L ++ + Sbjct: 148 EGLAPVDRE 156 >3X1F-A nrPDB Length = 352 Score = 27.4 bits (59), Expect = 6.9, Method: Composition-based stats. Identities = 22/140 (15%), Positives = 39/140 (27%), Gaps = 26/140 (18%) Query: 89 PAVILLIIAFPSFILLYLCDEVISPAMTIKAIGYQWYWKYEYSDFINDSGETVEFESYVI 148 P VI + + V + I+ + +D D G+ + ++ Sbjct: 44 PNVIAAHKGVNQAPVPLKMERVGPHDVHIEMTA-------QITDIEIDKGKIYKAWTF-- 94 Query: 149 PDELLEEGQLRLLDTDTSMVVPVDTHIRFVVTAADVI-------HDFAIPSLGIKVDATP 201 G L +VV I F + D + H +D P Sbjct: 95 --NGQAPGPL--------VVVNEGDTIHFTLKNMDPVVPHSMDFHAVHASPSKDFIDVMP 144 Query: 202 GRLNQVSALIQREGVFYGAC 221 + + + GVF C Sbjct: 145 NKSGTFTYPANKPGVFMYHC 164 >2Y1A-A nrPDB Length = 340 Score = 27.0 bits (58), Expect = 8.0, Method: Composition-based stats. Identities = 6/22 (27%), Positives = 9/22 (40%) Query: 201 PGRLNQVSALIQREGVFYGACS 222 PG + + GVF C+ Sbjct: 116 PGEETTLRFKATKPGVFVYHCA 137 >5AKR-A nrPDB Length = 378 Score = 27.0 bits (58), Expect = 8.7, Method: Composition-based stats. Identities = 6/22 (27%), Positives = 9/22 (40%) Query: 201 PGRLNQVSALIQREGVFYGACS 222 PG + + GVF C+ Sbjct: 154 PGEETTLRFKATKPGVFVYHCA 175 >6O7X-a nrPDB Length = 890 Score = 26.6 bits (57), Expect = 9.5, Method: Composition-based stats. Identities = 14/93 (15%), Positives = 35/93 (37%), Gaps = 3/93 (3%) Query: 40 HDNIMFYLLVILGLVSWMLYTIVMTYSKNPIAYKYIKHGQTIEVIWTIFPAVILLIIAFP 99 + + +G + + N + + + ++ +T +LL++ Sbjct: 461 FPFMFAIMFGDMGHGFILFLMALFLVL-NERKFGAMHRDEIFDMAFT--GRYVLLLMGAF 517 Query: 100 SFILLYLCDEVISPAMTIKAIGYQWYWKYEYSD 132 S L +++ S +MTI G+QW + + Sbjct: 518 SVYTGLLYNDIFSKSMTIFKSGWQWPSTFRKGE 550 >4NAK-A nrPDB Length = 228 Score = 26.6 bits (57), Expect = 9.9, Method: Composition-based stats. Identities = 13/87 (14%), Positives = 26/87 (29%) Query: 97 AFPSFILLYLCDEVISPAMTIKAIGYQWYWKYEYSDFINDSGETVEFESYVIPDELLEEG 156 A EV S ++ +K + + W+ + I FE + + Sbjct: 129 AVLGVPAKATIKEVNSDSLVVKTLDRKTLWEMQTPQVIKPELLKKGFELVKSEGLEVTDD 188 Query: 157 QLRLLDTDTSMVVPVDTHIRFVVTAAD 183 + + V ++ VT D Sbjct: 189 VSIVEYLKHPVYVSQGSYTNIKVTTPD 215 >2AGC-A nrPDB Length = 162 Score = 26.6 bits (57), Expect = 9.9, Method: Composition-based stats. Identities = 9/70 (12%), Positives = 24/70 (34%), Gaps = 7/70 (10%) Query: 121 GYQWYWKYEYSDFINDSGETVEFESYVIPDELLEEGQLRLLDTDTSMVVPVDTHIRFVVT 180 G+ W D ++ + +S I + + ++ + VP+ + +T Sbjct: 2 GFSW-------DNCDEGKDPAVIKSLTIQPDPIVVPGDVVVSLEGKTSVPLTAPQKVELT 54 Query: 181 AADVIHDFAI 190 + F + Sbjct: 55 VEKEVAGFWV 64 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.315 0.129 0.354 Lambda K H 0.267 0.0392 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 9,348,725 Number of Sequences: 36641 Number of extensions: 340154 Number of successful extensions: 1220 Number of sequences better than 10.0: 39 Number of HSP's better than 10.0 without gapping: 45 Number of HSP's successfully gapped in prelim test: 18 Number of HSP's that attempted gapping in prelim test: 1136 Number of HSP's gapped (non-prelim): 67 length of query: 251 length of database: 10,336,785 effective HSP length: 95 effective length of query: 156 effective length of database: 6,855,890 effective search space: 1069518840 effective search space used: 1069518840 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.1 bits) S2: 58 (27.0 bits)