BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.


Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= O95715
         (111 letters)

Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 
           36,641 sequences; 10,336,785 total letters

Searching..................................................done


Results from round 1


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

2HDL-A nrPDB                                                          165   5e-42
1MI2-A nrPDB                                                           41   1e-04
5OB5-A nrPDB                                                           33   0.022
1MSH-A nrPDB                                                           31   0.12 
1F9P-A nrPDB                                                           31   0.15 
1NAP-A nrPDB                                                           30   0.19 
2Y8D-A nrPDB                                                           29   0.48 
5E05-A nrPDB                                                           27   1.8  
1PFN-A nrPDB                                                           27   2.0  
5E04-A nrPDB                                                           27   2.1  
1G2S-A nrPDB                                                           27   2.7  
1EIG-A nrPDB                                                           26   3.7  
3JCO-U nrPDB                                                           26   4.2  
1L8K-A nrPDB                                                           26   4.4  
6FVW-U nrPDB                                                           25   6.0  
5FSG-A nrPDB                                                           25   6.3  
5FI0-A nrPDB                                                           25   7.1  
1WCH-A nrPDB                                                           25   7.6  

>2HDL-A nrPDB
          Length = 78

 Score =  165 bits (417), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 78/78 (100%), Positives = 78/78 (100%)

Query: 34  GSKCKCSRKGPKIRYSDVKKLEMKPKYPHCEEKMVIITTKSVSRYRGQEHCLHPKLQSTK 93
           GSKCKCSRKGPKIRYSDVKKLEMKPKYPHCEEKMVIITTKSVSRYRGQEHCLHPKLQSTK
Sbjct: 1   GSKCKCSRKGPKIRYSDVKKLEMKPKYPHCEEKMVIITTKSVSRYRGQEHCLHPKLQSTK 60

Query: 94  RFIKWYNAWNEKRRVYEE 111
           RFIKWYNAWNEKRRVYEE
Sbjct: 61  RFIKWYNAWNEKRRVYEE 78


>1MI2-A nrPDB
          Length = 73

 Score = 41.2 bits (95), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 18/62 (29%), Positives = 34/62 (54%), Gaps = 5/62 (8%)

Query: 36 KCKCSRKGPKIRYSDVKKLEMKPKYPHCEEKMVIITTKSVSRYRGQEHCLHPKLQSTKRF 95
          +C+C +  P++ + +++ L + P  PHC +  VI T K      GQ+ CL P+    ++ 
Sbjct: 8  RCQCLKTLPRVDFKNIQSLSVTPPGPHCAQTEVIATLKG-----GQKVCLDPEAPLVQKI 62

Query: 96 IK 97
          I+
Sbjct: 63 IQ 64


>5OB5-A nrPDB
          Length = 63

 Score = 33.5 bits (75), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 18/62 (29%), Positives = 33/62 (53%), Gaps = 5/62 (8%)

Query: 36 KCKCSRKGPKIRYSDVKKLEMKPKYPHCEEKMVIITTKSVSRYRGQEHCLHPKLQSTKRF 95
          +C+C +    I   +++ +++K   PHC +  VI T K+     GQ+ CL+P     K+ 
Sbjct: 3  RCQCLQTLQGIHLKNIQSVKVKSPGPHCAQTEVIATLKN-----GQKACLNPASPMVKKI 57

Query: 96 IK 97
          I+
Sbjct: 58 IE 59


>1MSH-A nrPDB
          Length = 72

 Score = 31.2 bits (69), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 17/62 (27%), Positives = 32/62 (51%), Gaps = 5/62 (8%)

Query: 36 KCKCSRKGPKIRYSDVKKLEMKPKYPHCEEKMVIITTKSVSRYRGQEHCLHPKLQSTKRF 95
          +C+C +    I   +++ + +K   PHC +  VI T K+     G++ CL+P     K+ 
Sbjct: 8  RCQCLQTLQGIHPKNIQSVNVKSPGPHCAQTEVIATLKN-----GRKACLNPASPIVKKI 62

Query: 96 IK 97
          I+
Sbjct: 63 IE 64


>1F9P-A nrPDB
          Length = 85

 Score = 30.8 bits (68), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 19/69 (27%), Positives = 32/69 (46%), Gaps = 5/69 (7%)

Query: 36  KCKCSRKGPKIRYSDVKKLEMKPKYPHCEEKMVIITTKSVSRYRGQEHCLHPKLQSTKRF 95
           +C C +    I   +++ LE+  K  HC +  VI T K      G++ CL P     K+ 
Sbjct: 19  RCMCIKTTSGIHPKNIQSLEVIGKGTHCNQVEVIATLKD-----GRKICLDPDAPRIKKI 73

Query: 96  IKWYNAWNE 104
           ++   A +E
Sbjct: 74  VQKKLAGDE 82


>1NAP-A nrPDB
          Length = 70

 Score = 30.4 bits (67), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 19/69 (27%), Positives = 32/69 (46%), Gaps = 5/69 (7%)

Query: 36  KCKCSRKGPKIRYSDVKKLEMKPKYPHCEEKMVIITTKSVSRYRGQEHCLHPKLQSTKRF 95
           +C C +    I   +++ LE+  K  HC +  VI T K      G++ CL P     K+ 
Sbjct: 4   RCLCIKTTSGIHPKNIQSLEVIGKGTHCNQVEVIATLKD-----GRKICLDPDAPRIKKI 58

Query: 96  IKWYNAWNE 104
           ++   A +E
Sbjct: 59  VQKKLAGDE 67


>2Y8D-A nrPDB
          Length = 306

 Score = 28.9 bits (63), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 11/43 (25%), Positives = 22/43 (51%)

Query: 62  HCEEKMVIITTKSVSRYRGQEHCLHPKLQSTKRFIKWYNAWNE 104
           H  E M+    ++       E+C  P ++S  +F++W+  W+E
Sbjct: 146 HIWESMLCGYREAEGDTETNENCRFPDIESVPQFLRWFQEWSE 188


>5E05-A nrPDB
          Length = 284

 Score = 26.9 bits (58), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 14/45 (31%), Positives = 23/45 (51%)

Query: 11 VSMRLLAAALLLLLLALYTARVDGSKCKCSRKGPKIRYSDVKKLE 55
          + + +L+ AL ++L ALY     G +     KG +IR+ D    E
Sbjct: 9  IGLYILSFALPIILKALYMLSTRGRQTIKENKGTRIRFKDDSSYE 53


>1PFN-A nrPDB
          Length = 68

 Score = 26.9 bits (58), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 17/62 (27%), Positives = 30/62 (48%), Gaps = 5/62 (8%)

Query: 36 KCKCSRKGPKIRYSDVKKLEMKPKYPHCEEKMVIITTKSVSRYRGQEHCLHPKLQSTKRF 95
          +C+C +   ++R   +  LE+    PHC    +I T K+     G++ CL  +    K+ 
Sbjct: 7  RCQCVKTTSQVRPRHITSLEVIKAGPHCPTAQLIATLKN-----GRKICLDLQAPLYKKI 61

Query: 96 IK 97
          IK
Sbjct: 62 IK 63


>5E04-A nrPDB
          Length = 284

 Score = 26.9 bits (58), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 13/45 (28%), Positives = 21/45 (46%)

Query: 11 VSMRLLAAALLLLLLALYTARVDGSKCKCSRKGPKIRYSDVKKLE 55
          +   +L  A+ ++L ALY     G +     KG +IR+ D    E
Sbjct: 7  IGAYILGFAIPIILKALYMLSTRGRQTVKDNKGTRIRFKDDSSFE 51


>1G2S-A nrPDB
          Length = 71

 Score = 26.6 bits (57), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 12/34 (35%), Positives = 21/34 (61%), Gaps = 5/34 (14%)

Query: 63 CEEKMVIITTKSVSRYRGQEHCLHPKLQSTKRFI 96
          C ++ VI TTK     RG++ C HP+ +  +++I
Sbjct: 34 CSQRAVIFTTK-----RGKKVCTHPRKKWVQKYI 62


>1EIG-A nrPDB
          Length = 73

 Score = 26.2 bits (56), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 5/43 (11%)

Query: 63  CEEKMVIITTKSVSRYRGQEHCLHPKLQSTKRFIKWYNAWNEK 105
           C +  VI TTK     +GQ+ C  PK +  +R++K  +A  +K
Sbjct: 32  CLKAGVIFTTK-----KGQQSCGDPKQEWVQRYMKNLDAKQKK 69


>3JCO-U nrPDB
          Length = 338

 Score = 25.8 bits (55), Expect = 4.2,   Method: Composition-based stats.
 Identities = 12/31 (38%), Positives = 18/31 (58%)

Query: 43  GPKIRYSDVKKLEMKPKYPHCEEKMVIITTK 73
           GPK+R SD+K  E+  KY      ++I+  K
Sbjct: 96  GPKLRASDLKINELFKKYTQNNPLLLIVDVK 126


>1L8K-A nrPDB
          Length = 314

 Score = 25.8 bits (55), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 10/41 (24%), Positives = 22/41 (53%)

Query: 28  YTARVDGSKCKCSRKGPKIRYSDVKKLEMKPKYPHCEEKMV 68
           Y A ++G+KC       + R+ ++ K ++ P + H   K++
Sbjct: 269 YMAIIEGAKCIKGDSSIQKRWKELSKEDLSPAFDHSPNKIM 309


>6FVW-U nrPDB
          Length = 304

 Score = 25.4 bits (54), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 12/31 (38%), Positives = 18/31 (58%)

Query: 43  GPKIRYSDVKKLEMKPKYPHCEEKMVIITTK 73
           GPK+R SD+K  E+  KY      ++I+  K
Sbjct: 96  GPKLRASDLKINELFKKYTQNNPLLLIVDVK 126


>5FSG-A nrPDB
          Length = 698

 Score = 25.4 bits (54), Expect = 6.3,   Method: Composition-based stats.
 Identities = 15/44 (34%), Positives = 20/44 (45%), Gaps = 5/44 (11%)

Query: 22  LLLLALYTARVDGSKCKCSRKGPKIRYSDVKKLE-----MKPKY 60
           +LL ALY     G +     KG +IR+ D    E      KPK+
Sbjct: 394 ILLKALYMLTTRGRQTTKDNKGTRIRFKDDSSFEDVNGIRKPKH 437


>5FI0-A nrPDB
          Length = 374

 Score = 25.0 bits (53), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 12/30 (40%), Positives = 17/30 (56%)

Query: 82  EHCLHPKLQSTKRFIKWYNAWNEKRRVYEE 111
           E+CLHP+ QS       +  + +K  VYEE
Sbjct: 84  EYCLHPEPQSQHELGNVFLKFKDKFCVYEE 113


>1WCH-A nrPDB
          Length = 315

 Score = 25.0 bits (53), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 10/23 (43%), Positives = 14/23 (60%)

Query: 24  LLALYTARVDGSKCKCSRKGPKI 46
           ++A+ T  V+G K KC R  P I
Sbjct: 142 VIAMMTQEVEGEKIKCQRYWPNI 164


Searching..................................................done


Results from round 2


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value
Sequences used in model and found again:

2HDL-A nrPDB                                                          137   1e-33
1MI2-A nrPDB                                                           92   7e-20

Sequences not found previously or not previously below threshold:

5OB5-A nrPDB                                                           66   4e-12
1MSH-A nrPDB                                                           65   7e-12
1F9P-A nrPDB                                                           62   5e-11
1NAP-A nrPDB                                                           60   2e-10
1PFN-A nrPDB                                                           51   1e-07
2MGS-A nrPDB                                                           50   2e-07
1ROD-A nrPDB                                                           48   1e-06
1PLF-A nrPDB                                                           45   6e-06
4XDX-A nrPDB                                                           45   1e-05
1RJT-A nrPDB                                                           36   0.003
2R3Z-A nrPDB                                                           35   0.010
1LV9-A nrPDB                                                           34   0.021
2Y8D-A nrPDB                                                           31   0.15 
1G2S-A nrPDB                                                           30   0.32 
5CBA-E nrPDB                                                           29   0.63 
6EHZ-A nrPDB                                                           28   0.93 
5E05-A nrPDB                                                           28   0.94 
5E04-A nrPDB                                                           27   1.5  
2QSG-A nrPDB                                                           27   1.6  
4UM9-D nrPDB                                                           27   1.9  
4UM8-B nrPDB                                                           27   1.9  
2RJQ-A nrPDB                                                           27   2.7  
4MHE-A nrPDB                                                           26   3.3  
4LMQ-D nrPDB                                                           26   3.6  
1EIG-A nrPDB                                                           26   3.7  
3EAP-A nrPDB                                                           26   3.7  
2K04-A nrPDB                                                           26   4.1  
5FI0-A nrPDB                                                           26   4.8  
3KYD-B nrPDB                                                           26   4.9  
3KYC-B nrPDB                                                           26   4.9  
3S81-A nrPDB                                                           25   6.8  
2RA4-A nrPDB                                                           25   7.6  
5FSG-A nrPDB                                                           25   8.7  
6I2N-D nrPDB                                                           25   8.8  

>2HDL-A nrPDB
          Length = 78

 Score =  137 bits (344), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 78/78 (100%), Positives = 78/78 (100%)

Query: 34  GSKCKCSRKGPKIRYSDVKKLEMKPKYPHCEEKMVIITTKSVSRYRGQEHCLHPKLQSTK 93
           GSKCKCSRKGPKIRYSDVKKLEMKPKYPHCEEKMVIITTKSVSRYRGQEHCLHPKLQSTK
Sbjct: 1   GSKCKCSRKGPKIRYSDVKKLEMKPKYPHCEEKMVIITTKSVSRYRGQEHCLHPKLQSTK 60

Query: 94  RFIKWYNAWNEKRRVYEE 111
           RFIKWYNAWNEKRRVYEE
Sbjct: 61  RFIKWYNAWNEKRRVYEE 78


>1MI2-A nrPDB
          Length = 73

 Score = 91.7 bits (226), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 18/62 (29%), Positives = 34/62 (54%), Gaps = 5/62 (8%)

Query: 36 KCKCSRKGPKIRYSDVKKLEMKPKYPHCEEKMVIITTKSVSRYRGQEHCLHPKLQSTKRF 95
          +C+C +  P++ + +++ L + P  PHC +  VI T K      GQ+ CL P+    ++ 
Sbjct: 8  RCQCLKTLPRVDFKNIQSLSVTPPGPHCAQTEVIATLKG-----GQKVCLDPEAPLVQKI 62

Query: 96 IK 97
          I+
Sbjct: 63 IQ 64


>5OB5-A nrPDB
          Length = 63

 Score = 65.9 bits (159), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 18/62 (29%), Positives = 33/62 (53%), Gaps = 5/62 (8%)

Query: 36 KCKCSRKGPKIRYSDVKKLEMKPKYPHCEEKMVIITTKSVSRYRGQEHCLHPKLQSTKRF 95
          +C+C +    I   +++ +++K   PHC +  VI T K+     GQ+ CL+P     K+ 
Sbjct: 3  RCQCLQTLQGIHLKNIQSVKVKSPGPHCAQTEVIATLKN-----GQKACLNPASPMVKKI 57

Query: 96 IK 97
          I+
Sbjct: 58 IE 59


>1MSH-A nrPDB
          Length = 72

 Score = 65.1 bits (157), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 17/62 (27%), Positives = 32/62 (51%), Gaps = 5/62 (8%)

Query: 36 KCKCSRKGPKIRYSDVKKLEMKPKYPHCEEKMVIITTKSVSRYRGQEHCLHPKLQSTKRF 95
          +C+C +    I   +++ + +K   PHC +  VI T K+     G++ CL+P     K+ 
Sbjct: 8  RCQCLQTLQGIHPKNIQSVNVKSPGPHCAQTEVIATLKN-----GRKACLNPASPIVKKI 62

Query: 96 IK 97
          I+
Sbjct: 63 IE 64


>1F9P-A nrPDB
          Length = 85

 Score = 62.0 bits (149), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 17/62 (27%), Positives = 29/62 (46%), Gaps = 5/62 (8%)

Query: 36 KCKCSRKGPKIRYSDVKKLEMKPKYPHCEEKMVIITTKSVSRYRGQEHCLHPKLQSTKRF 95
          +C C +    I   +++ LE+  K  HC +  VI T K      G++ CL P     K+ 
Sbjct: 19 RCMCIKTTSGIHPKNIQSLEVIGKGTHCNQVEVIATLK-----DGRKICLDPDAPRIKKI 73

Query: 96 IK 97
          ++
Sbjct: 74 VQ 75


>1NAP-A nrPDB
          Length = 70

 Score = 60.5 bits (145), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 17/62 (27%), Positives = 29/62 (46%), Gaps = 5/62 (8%)

Query: 36 KCKCSRKGPKIRYSDVKKLEMKPKYPHCEEKMVIITTKSVSRYRGQEHCLHPKLQSTKRF 95
          +C C +    I   +++ LE+  K  HC +  VI T K      G++ CL P     K+ 
Sbjct: 4  RCLCIKTTSGIHPKNIQSLEVIGKGTHCNQVEVIATLK-----DGRKICLDPDAPRIKKI 58

Query: 96 IK 97
          ++
Sbjct: 59 VQ 60


>1PFN-A nrPDB
          Length = 68

 Score = 50.9 bits (120), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 17/62 (27%), Positives = 30/62 (48%), Gaps = 5/62 (8%)

Query: 36 KCKCSRKGPKIRYSDVKKLEMKPKYPHCEEKMVIITTKSVSRYRGQEHCLHPKLQSTKRF 95
          +C+C +   ++R   +  LE+    PHC    +I T K+     G++ CL  +    K+ 
Sbjct: 7  RCQCVKTTSQVRPRHITSLEVIKAGPHCPTAQLIATLKN-----GRKICLDLQAPLYKKI 61

Query: 96 IK 97
          IK
Sbjct: 62 IK 63


>2MGS-A nrPDB
          Length = 78

 Score = 50.5 bits (119), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 14/62 (22%), Positives = 28/62 (45%), Gaps = 5/62 (8%)

Query: 36 KCKCSRKGPKIRYSDVKKLEMKPKYPHCEEKMVIITTKSVSRYRGQEHCLHPKLQSTKRF 95
          +C C +    +    +  L++    P C +  V+ + K+     G+E CL P+    K+ 
Sbjct: 12 RCVCLQTTQGVHPKMISNLQVFAIGPQCSKVEVVASLKN-----GKEICLDPEAPFLKKV 66

Query: 96 IK 97
          I+
Sbjct: 67 IQ 68


>1ROD-A nrPDB
          Length = 72

 Score = 47.8 bits (112), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 16/63 (25%), Positives = 27/63 (42%), Gaps = 6/63 (9%)

Query: 36 KCKCSRKGPK-IRYSDVKKLEMKPKYPHCEEKMVIITTKSVSRYRGQEHCLHPKLQSTKR 94
          +C+C +   K      +K+L +    PHC    +I+         G+E CL P     K+
Sbjct: 6  RCQCIKTYSKPFHPKFIKELRVIESGPHCANTEIIVKLS-----DGRELCLDPASPIVKK 60

Query: 95 FIK 97
           I+
Sbjct: 61 IIE 63


>1PLF-A nrPDB
          Length = 72

 Score = 45.5 bits (106), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 26/62 (41%), Gaps = 5/62 (8%)

Query: 36 KCKCSRKGPKIRYSDVKKLEMKPKYPHCEEKMVIITTKSVSRYRGQEHCLHPKLQSTKRF 95
          +C C +    I    +  LE+     HC    +I T K+     G++ CL  +    K+ 
Sbjct: 11 QCVCLKTTSGINPRHISSLEVIGAGLHCPSPQLIATLKT-----GRKICLDQQNPLYKKI 65

Query: 96 IK 97
          IK
Sbjct: 66 IK 67


>4XDX-A nrPDB
          Length = 70

 Score = 44.7 bits (104), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 16/63 (25%), Positives = 28/63 (44%), Gaps = 6/63 (9%)

Query: 36 KCKCSRKGPK-IRYSDVKKLEMKPKYPHCEEKMVIITTKSVSRYRGQEHCLHPKLQSTKR 94
          +C+C +   K      +K+L +    PHC    +I+         G+E CL PK    +R
Sbjct: 4  RCQCIKTYSKPFHPKFIKELRVIESGPHCANTEIIVKLS-----DGRELCLDPKENWVQR 58

Query: 95 FIK 97
           ++
Sbjct: 59 VVE 61


>1RJT-A nrPDB
          Length = 73

 Score = 36.2 bits (82), Expect = 0.003,   Method: Composition-based stats.
 Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 5/63 (7%)

Query: 36 KCKCSRKGPK-IRYSDVKKLEMKPKYPHCEEKMVIITTKSVSRYRGQEHCLHPKLQSTKR 94
          +C C   G K ++ +D++K  +     +C++  VIIT K     +GQ  CL+PK +  + 
Sbjct: 8  RCLCIGPGVKAVKVADIEKASIMYPSNNCDKIEVIITLK---ENKGQR-CLNPKSKQARL 63

Query: 95 FIK 97
           IK
Sbjct: 64 IIK 66


>2R3Z-A nrPDB
          Length = 68

 Score = 34.7 bits (78), Expect = 0.010,   Method: Composition-based stats.
 Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 7/66 (10%)

Query: 36 KCKCSR--KGPKIRYSDVKKLEMKPKYPHCEEKMVIITTKSVSRYRGQEHCLHPKLQSTK 93
          +C C     GP +R   + KLE+ P    C    +I T K     R    CL+P+ ++ K
Sbjct: 8  RCNCIHIDDGP-VRMRAIGKLEIIPASLSCPRVEIIATMKKNDEQR----CLNPESKTIK 62

Query: 94 RFIKWY 99
            +K +
Sbjct: 63 NLMKAF 68


>1LV9-A nrPDB
          Length = 77

 Score = 33.5 bits (75), Expect = 0.021,   Method: Composition-based stats.
 Identities = 18/72 (25%), Positives = 34/72 (47%), Gaps = 5/72 (6%)

Query: 36  KCKCSRKGPK-IRYSDVKKLEMKPKYPHCEEKMVIITTKSVSRYRGQEHCLHPKLQSTKR 94
           +C C     + +    ++KLE+ P    C    +I T K     +G++ CL+P+ ++ K 
Sbjct: 8   RCTCISISNQPVNPRSLEKLEIIPASQFCPRVEIIATMK----KKGEKRCLNPESKAIKN 63

Query: 95  FIKWYNAWNEKR 106
            +K  +    KR
Sbjct: 64  LLKAVSKEMSKR 75


>2Y8D-A nrPDB
          Length = 306

 Score = 30.8 bits (68), Expect = 0.15,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 29/55 (52%), Gaps = 5/55 (9%)

Query: 62  HCEEKMVIITTKSVSRYRGQEHCLHPKLQSTKRFIKWYNAWNE-----KRRVYEE 111
           H  E M+    ++       E+C  P ++S  +F++W+  W+E     ++++Y++
Sbjct: 146 HIWESMLCGYREAEGDTETNENCRFPDIESVPQFLRWFQEWSENFCDRRQKLYDK 200


>1G2S-A nrPDB
          Length = 71

 Score = 29.7 bits (65), Expect = 0.32,   Method: Composition-based stats.
 Identities = 12/34 (35%), Positives = 21/34 (61%), Gaps = 5/34 (14%)

Query: 63 CEEKMVIITTKSVSRYRGQEHCLHPKLQSTKRFI 96
          C ++ VI TTK     RG++ C HP+ +  +++I
Sbjct: 34 CSQRAVIFTTK-----RGKKVCTHPRKKWVQKYI 62


>5CBA-E nrPDB
          Length = 88

 Score = 28.5 bits (62), Expect = 0.63,   Method: Composition-based stats.
 Identities = 12/63 (19%), Positives = 31/63 (49%), Gaps = 6/63 (9%)

Query: 36 KCKCSRKGPK-IRYSDVKKLEMKPKYPHCEEKMVIITTKSVSRYRGQEHCLHPKLQSTKR 94
          +C+C ++    I    + ++++ P+   C  K +I+  K+ S       C+ P+ +  +R
Sbjct: 11 RCRCVQESSVFIPRRFIDRIQILPRGNGCPRKEIIVWKKNKSI-----VCVDPQAEWIQR 65

Query: 95 FIK 97
           ++
Sbjct: 66 MME 68


>6EHZ-A nrPDB
          Length = 98

 Score = 28.1 bits (61), Expect = 0.93,   Method: Composition-based stats.
 Identities = 18/72 (25%), Positives = 36/72 (50%), Gaps = 8/72 (11%)

Query: 36  KCKCSRKGPKIRYSDVKKLEMKPKYPHCEEKMVIITTKSVSRYRGQEHCLHPKLQSTKRF 95
           +C C      I  ++VK L++    P+C    ++   K+ +R    + C+ PKL+  + +
Sbjct: 8   RCPCRFFESHIARANVKHLKIL-NTPNCA-LQIVARLKNNNR----QVCIDPKLKWIQEY 61

Query: 96  IKWYNAWNEKRR 107
           ++   A N+ RR
Sbjct: 62  LE--KALNKGRR 71


>5E05-A nrPDB
          Length = 284

 Score = 28.1 bits (61), Expect = 0.94,   Method: Composition-based stats.
 Identities = 19/76 (25%), Positives = 33/76 (43%), Gaps = 5/76 (6%)

Query: 11 VSMRLLAAALLLLLLALYTARVDGSKCKCSRKGPKIRYSDVKKLE-----MKPKYPHCEE 65
          + + +L+ AL ++L ALY     G +     KG +IR+ D    E      KP++ +   
Sbjct: 9  IGLYILSFALPIILKALYMLSTRGRQTIKENKGTRIRFKDDSSYEEVNGIRKPRHLYVSM 68

Query: 66 KMVIITTKSVSRYRGQ 81
               T K+     G+
Sbjct: 69 PTAQSTMKADEITPGR 84


>5E04-A nrPDB
          Length = 284

 Score = 27.4 bits (59), Expect = 1.5,   Method: Composition-based stats.
 Identities = 19/72 (26%), Positives = 30/72 (41%), Gaps = 5/72 (6%)

Query: 15 LLAAALLLLLLALYTARVDGSKCKCSRKGPKIRYSDVKKLE-----MKPKYPHCEEKMVI 69
          +L  A+ ++L ALY     G +     KG +IR+ D    E      KPK+ +       
Sbjct: 11 ILGFAIPIILKALYMLSTRGRQTVKDNKGTRIRFKDDSSFEEVNGIRKPKHLYVSMPTAQ 70

Query: 70 ITTKSVSRYRGQ 81
           T K+     G+
Sbjct: 71 STMKAEEITPGR 82


>2QSG-A nrPDB
          Length = 533

 Score = 27.4 bits (59), Expect = 1.6,   Method: Composition-based stats.
 Identities = 19/81 (23%), Positives = 36/81 (44%), Gaps = 14/81 (17%)

Query: 38  KCSRKGPKIRYSDVKKLE-------MKPKYPHCEEKMVIITTKSVSRYRGQEHCLHPKLQ 90
           K S+K   +   ++K +E       + PK   C E+ ++    +  R  G   C      
Sbjct: 223 KFSKKWITVDPVNLKTIEQVRLHSKLAPKGVACCERNMLRYVIAYDRKYG---CRD---- 275

Query: 91  STKRFIKWYNAWNEKRRVYEE 111
            T+R+ +W N+   KRR+ ++
Sbjct: 276 VTRRYAQWMNSKVRKRRITKD 296


>4UM9-D nrPDB
          Length = 483

 Score = 27.0 bits (58), Expect = 1.9,   Method: Composition-based stats.
 Identities = 12/56 (21%), Positives = 22/56 (39%)

Query: 33  DGSKCKCSRKGPKIRYSDVKKLEMKPKYPHCEEKMVIITTKSVSRYRGQEHCLHPK 88
           +G+  +  +K   ++  D     +    PHCE +   I  K V      E  + P+
Sbjct: 379 NGTLFQHQKKCSHMKVGDTASFSVTVNIPHCERRSRHIIIKPVGLGDALELLVSPE 434


>4UM8-B nrPDB
          Length = 788

 Score = 27.0 bits (58), Expect = 1.9,   Method: Composition-based stats.
 Identities = 12/56 (21%), Positives = 22/56 (39%)

Query: 33  DGSKCKCSRKGPKIRYSDVKKLEMKPKYPHCEEKMVIITTKSVSRYRGQEHCLHPK 88
           +G+  +  +K   ++  D     +    PHCE +   I  K V      E  + P+
Sbjct: 396 NGTLFQHQKKCSHMKVGDTASFSVTVNIPHCERRSRHIIIKPVGLGDALELLVSPE 451


>2RJQ-A nrPDB
          Length = 378

 Score = 26.6 bits (57), Expect = 2.7,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 20/55 (36%), Gaps = 2/55 (3%)

Query: 41  RKGPKIRYSDVKKLEMK--PKYPHCEEKMVIITTKSVSRYRGQEHCLHPKLQSTK 93
            + P   Y   ++  +   P+Y  C    V          +GQ  CL  KL + +
Sbjct: 223 EELPGQTYDATQQCNLTFGPEYSVCPGMDVCARLWCAVVRQGQMVCLTKKLPAVE 277


>4MHE-A nrPDB
          Length = 70

 Score = 26.2 bits (56), Expect = 3.3,   Method: Composition-based stats.
 Identities = 11/36 (30%), Positives = 19/36 (52%), Gaps = 5/36 (13%)

Query: 61 PHCEEKMVIITTKSVSRYRGQEHCLHPKLQSTKRFI 96
          P C +  VI+ TK     RG++ C  P  +  +++I
Sbjct: 33 PQCPKPGVILLTK-----RGRQICADPNKKWVQKYI 63


>4LMQ-D nrPDB
          Length = 61

 Score = 26.2 bits (56), Expect = 3.6,   Method: Composition-based stats.
 Identities = 13/62 (20%), Positives = 31/62 (50%), Gaps = 6/62 (9%)

Query: 36 KCKCSRKGPKIRYSDVKKLEMKPKYPHCEEKMVIITTKSVSRYRGQEHCLHPKLQSTKRF 95
          +C C      +  ++VK L++    P+C    ++   K+ +R    + C+ PKL+  + +
Sbjct: 1  RCPCRFFESHVARANVKHLKIL-NTPNCA-LQIVARLKNNNR----QVCIDPKLKWIQEY 54

Query: 96 IK 97
          ++
Sbjct: 55 LE 56


>1EIG-A nrPDB
          Length = 73

 Score = 26.2 bits (56), Expect = 3.7,   Method: Composition-based stats.
 Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 5/43 (11%)

Query: 63  CEEKMVIITTKSVSRYRGQEHCLHPKLQSTKRFIKWYNAWNEK 105
           C +  VI TTK     +GQ+ C  PK +  +R++K  +A  +K
Sbjct: 32  CLKAGVIFTTK-----KGQQSCGDPKQEWVQRYMKNLDAKQKK 69


>3EAP-A nrPDB
          Length = 271

 Score = 26.2 bits (56), Expect = 3.7,   Method: Composition-based stats.
 Identities = 12/29 (41%), Positives = 17/29 (58%)

Query: 14 RLLAAALLLLLLALYTARVDGSKCKCSRK 42
          RL+  ALL  L A Y  +V G + +C R+
Sbjct: 23 RLVRLALLQHLRAFYGIKVKGVRGQCDRR 51


>2K04-A nrPDB
          Length = 70

 Score = 25.8 bits (55), Expect = 4.1,   Method: Composition-based stats.
 Identities = 13/62 (20%), Positives = 31/62 (50%), Gaps = 6/62 (9%)

Query: 36 KCKCSRKGPKIRYSDVKKLEMKPKYPHCEEKMVIITTKSVSRYRGQEHCLHPKLQSTKRF 95
          +C C      +  ++VK L++    P+C    ++   K+ +R    + C+ PKL+  + +
Sbjct: 10 RCPCRFFESHVARANVKHLKIL-NTPNCA-CQIVARLKNNNR----QVCIDPKLKWIQEY 63

Query: 96 IK 97
          ++
Sbjct: 64 LE 65


>5FI0-A nrPDB
          Length = 374

 Score = 25.8 bits (55), Expect = 4.8,   Method: Composition-based stats.
 Identities = 12/30 (40%), Positives = 17/30 (56%)

Query: 82  EHCLHPKLQSTKRFIKWYNAWNEKRRVYEE 111
           E+CLHP+ QS       +  + +K  VYEE
Sbjct: 84  EYCLHPEPQSQHELGNVFLKFKDKFCVYEE 113


>3KYD-B nrPDB
          Length = 551

 Score = 25.8 bits (55), Expect = 4.9,   Method: Composition-based stats.
 Identities = 10/49 (20%), Positives = 22/49 (44%)

Query: 15  LLAAALLLLLLALYTARVDGSKCKCSRKGPKIRYSDVKKLEMKPKYPHC 63
           ++A  ++L  L + + ++D  +     K P  R   +    + P  P+C
Sbjct: 395 VIAGLIVLEGLKILSGKIDQCRTIFLNKQPNPRKKLLVPCALDPPNPNC 443


>3KYC-B nrPDB
          Length = 660

 Score = 25.8 bits (55), Expect = 4.9,   Method: Composition-based stats.
 Identities = 10/49 (20%), Positives = 22/49 (44%)

Query: 15  LLAAALLLLLLALYTARVDGSKCKCSRKGPKIRYSDVKKLEMKPKYPHC 63
           ++A  ++L  L + + ++D  +     K P  R   +    + P  P+C
Sbjct: 413 VIAGLIVLEGLKILSGKIDQCRTIFLNKQPNPRKKLLVPCALDPPNPNC 461


>3S81-A nrPDB
          Length = 268

 Score = 25.1 bits (53), Expect = 6.8,   Method: Composition-based stats.
 Identities = 17/95 (17%), Positives = 35/95 (36%), Gaps = 17/95 (17%)

Query: 18  AALLLLLLALYT-ARVDGSKCKCSRKGPKIRYSDVKKLEMKPKYPHCEEKMVIITTKSVS 76
           A   L++ A+YT  R D +  +     P+I         +  +     + +++  T+   
Sbjct: 174 AGQALVMQAIYTLKRGDKTAAQAL-LLPQID-------SLIARG---AQAIIMGCTEIPL 222

Query: 77  RYRGQEHCL-----HPKLQSTKRFIKWYNAWNEKR 106
              G E  +            +  I+WY +W + R
Sbjct: 223 IVAGHERAIACPMIDSTASLVRAAIRWYESWPDTR 257


>2RA4-A nrPDB
          Length = 76

 Score = 25.1 bits (53), Expect = 7.6,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 26/63 (41%), Gaps = 7/63 (11%)

Query: 35 SKCKCSRKGPKIRYSDVKKLEMKPKYPHCEEKMVIITTKSVSRYRGQEHCLHPKLQSTKR 94
          S C  +    KI    +K   +      C +K VI  TK      G+E C  PK +  + 
Sbjct: 10 STCCFTFSSKKISLQRLKSYVITTS--RCPQKAVIFRTK-----LGKEICADPKEKWVQN 62

Query: 95 FIK 97
          ++K
Sbjct: 63 YMK 65


>5FSG-A nrPDB
          Length = 698

 Score = 24.7 bits (52), Expect = 8.7,   Method: Composition-based stats.
 Identities = 12/34 (35%), Positives = 16/34 (47%)

Query: 22  LLLLALYTARVDGSKCKCSRKGPKIRYSDVKKLE 55
           +LL ALY     G +     KG +IR+ D    E
Sbjct: 394 ILLKALYMLTTRGRQTTKDNKGTRIRFKDDSSFE 427


>6I2N-D nrPDB
          Length = 430

 Score = 24.7 bits (52), Expect = 8.8,   Method: Composition-based stats.
 Identities = 12/34 (35%), Positives = 16/34 (47%)

Query: 22  LLLLALYTARVDGSKCKCSRKGPKIRYSDVKKLE 55
           +LL ALY     G +     KG +IR+ D    E
Sbjct: 134 ILLKALYMLTTRGRQTTKDNKGTRIRFKDDSSFE 167


  Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta
    Posted date:  Jan 3, 2023  9:05 PM
  Number of letters in database: 10,336,785
  Number of sequences in database:  36,641
  
Lambda     K      H
   0.317    0.131    0.392 

Lambda     K      H
   0.267   0.0402    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,220,403
Number of Sequences: 36641
Number of extensions: 134711
Number of successful extensions: 316
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 259
Number of HSP's gapped (non-prelim): 58
length of query: 111
length of database: 10,336,785
effective HSP length: 77
effective length of query: 34
effective length of database: 7,515,428
effective search space: 255524552
effective search space used: 255524552
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 52 (24.7 bits)