BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= O95571 (254 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 4CHL-A nrPDB 483 e-137 1XM8-A nrPDB 71 5e-13 1QH5-A nrPDB 71 5e-13 2P18-A nrPDB 52 2e-07 4AD9-A nrPDB 51 5e-07 2QED-A nrPDB 49 2e-06 6N36-A nrPDB 39 0.002 3DAH-A nrPDB 32 0.25 4Z42-C nrPDB 32 0.27 2Y8B-A nrPDB 32 0.36 3DHA-A nrPDB 30 0.81 5BT1-C nrPDB 30 0.86 3ADR-A nrPDB 30 1.0 1DKU-A nrPDB 30 1.4 5HH5-A nrPDB 29 1.5 4S2U-A nrPDB 29 2.0 1BOU-B nrPDB 29 2.3 5VEY-A nrPDB 28 2.6 5KKP-A nrPDB 28 4.8 2F8N-K nrPDB 28 5.0 2CBF-A nrPDB 28 5.4 1CBF-A nrPDB 27 5.9 2XQL-A nrPDB 27 7.5 3LZ1-C nrPDB 27 9.9 >4CHL-A nrPDB Length = 238 Score = 483 bits (1244), Expect = e-137, Method: Compositional matrix adjust. Identities = 235/238 (98%), Positives = 235/238 (98%) Query: 17 GGSGAPILLRQMFEPVSCTFTYLLGDRESREAVLIDPVLETAPRDAQLIKELGLRLLYAV 76 G APILLRQMFEPVSCTFTYLLGDRESREAVLIDPVLETAPRDAQLIKELGLRLLYAV Sbjct: 1 GPVDAPILLRQMFEPVSCTFTYLLGDRESREAVLIDPVLETAPRDAQLIKELGLRLLYAV 60 Query: 77 NTHCHADHITGSGLLRSLLPGCQSVISRLSGAQADLHIEDGDSIRFGRFALETRASPGHT 136 NTHCHADHITGSGLLRSLLPGCQSVISRLSGAQADLHIEDGDSIRFGRFALETRASPGHT Sbjct: 61 NTHCHADHITGSGLLRSLLPGCQSVISRLSGAQADLHIEDGDSIRFGRFALETRASPGHT 120 Query: 137 PGCVTFVLNDHSMAFTGDALLIRGCGRTDFQQGCAKTLYHSVHEKIFTLPGDCLIYPAHD 196 PGCVTFVLNDHSMAFTGDALLIRGCGRTDFQQGCAKTLYHSVHEKIFTLPGDCLIYPAHD Sbjct: 121 PGCVTFVLNDHSMAFTGDALLIRGCGRTDFQQGCAKTLYHSVHEKIFTLPGDCLIYPAHD 180 Query: 197 YHGFTVSTVEEERTLNPRLTLSCEEFVKIMGNLNLPKPQQIDFAVPANMRCGVQTPTA 254 YHGFTVSTVEEERTLNPRLTLSCEEFVKIMGNLNLPKPQQIDFAVPANMRCGVQTPTA Sbjct: 181 YHGFTVSTVEEERTLNPRLTLSCEEFVKIMGNLNLPKPQQIDFAVPANMRCGVQTPTA 238 >1XM8-A nrPDB Length = 254 Score = 70.9 bits (172), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 52/183 (28%), Positives = 85/183 (46%), Gaps = 12/183 (6%) Query: 35 TFTYLLGDRESREAVLIDPVLETAPRDAQLIKELGLRLLYAVNTHCHADHITGSGLLRSL 94 + Y+L D ++ ++DP D+ +K G L Y +NTH H DH G+ L+ Sbjct: 12 NYAYILHDEDTGTVGVVDPSEAEPIIDS--LKRSGRNLTYILNTHHHYDHTGGNLELKDR 69 Query: 95 LPGCQSVISRLSGAQA---DLHIEDGDSIRFGRFALETRASPGHTPGCVTFVLNDHSMAF 151 G + + S + + D+ ++DGD F + +PGHT G ++ F Sbjct: 70 Y-GAKVIGSAMDKDRIPGIDMALKDGDKWMFAGHEVHVMDTPGHTKGHISLYFPGSRAIF 128 Query: 152 TGDALLIRGCGRTDFQQGCAKTLYHSVHEKIFTLPGDCLIYPAHDYHGFTVSTVEEERTL 211 TGD + CG+ +G K + S+ +KI +LP D IY H+Y T+S + +L Sbjct: 129 TGDTMFSLSCGK--LFEGTPKQMLASL-QKITSLPDDTSIYCGHEY---TLSNSKFALSL 182 Query: 212 NPR 214 P Sbjct: 183 EPN 185 >1QH5-A nrPDB Length = 260 Score = 70.9 bits (172), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 58/229 (25%), Positives = 104/229 (45%), Gaps = 21/229 (9%) Query: 35 TFTYLLGDRESREAVLIDPVLETAPRDAQLIKELGLRLLYAVNTHCHADHITGSGLLRSL 94 + YL+ D E++EA ++DPV DA ++ G++L + TH H DH G+ L L Sbjct: 12 NYMYLVIDDETKEAAIVDPVQPQKVVDAA--RKHGVKLTTVLTTHHHWDHAGGNEKLVKL 69 Query: 95 LPGCQSVISRLSGAQADLHIEDGDSIRFGRFALETRASPGHTPGCVTFVL-----NDHSM 149 G + I +++ G ++ A+P HT G + + + ++ Sbjct: 70 ESGLKVYGGDDRIGALTHKITHLSTLQVGSLNVKCLATPCHTSGHICYFVSKPGGSEPPA 129 Query: 150 AFTGDALLIRGCGRTDFQQGCAKTLYHSVHEKIFTLPGDCLIYPAHDYHGFTVSTVEEER 209 FTGD L + GCG+ F +G A + ++ E + LP D +Y H+Y T++ ++ R Sbjct: 130 VFTGDTLFVAGCGK--FYEGTADEMCKALLEVLGRLPPDTRVYCGHEY---TINNLKFAR 184 Query: 210 TLNP-------RLTLSCEEFVKIMGNLNLPKPQQIDFAVPANMRCGVQT 251 + P +L + E++ +G +P +F MR +T Sbjct: 185 HVEPGNAAIREKLAWAKEKYS--IGEPTVPSTLAEEFTYNPFMRVREKT 231 >2P18-A nrPDB Length = 311 Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 47/191 (24%), Positives = 79/191 (41%), Gaps = 30/191 (15%) Query: 35 TFTYLLGDRESREAVLIDPVLETAPR----DAQLIKELGLRLLYA----VNTHCHADHIT 86 F+YL+ D + +D + P + L ++ + Y ++TH H DH Sbjct: 40 NFSYLINDHTTHTLAAVDVNADYKPILTYIEEHLKQQGNADVTYTFSTILSTHKHWDHSG 99 Query: 87 GSGLLRSLLPGCQSVISRL--SGAQADLH-----IEDGDSIRFGRFALETRASPGHTPGC 139 G+ L++ L S + + GA + + +GD ++ G ++E +P HT G Sbjct: 100 GNAKLKAELEAMNSTVPVVVVGGANDSIPAVTKPVREGDRVQVGDLSVEVIDAPCHTRGH 159 Query: 140 VTFVL------NDHSMAFTGDALLIRGCGRTDFQQGCAKTL-------YHSVHEKIFTLP 186 V + + ND FTGD + I G G F +G K + YH + L Sbjct: 160 VLYKVQHPQHPNDGVALFTGDTMFIAGIGA--FFEGDEKDMCRAMEKVYHIHKGNDYALD 217 Query: 187 GDCLIYPAHDY 197 I+P H+Y Sbjct: 218 KVTFIFPGHEY 228 >4AD9-A nrPDB Length = 289 Score = 50.8 bits (120), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 56/211 (26%), Positives = 92/211 (43%), Gaps = 35/211 (16%) Query: 3 EAVLRVARRQLSQRGGSGAPILLRQMFEPVSCTFTYLLGDRESREAVLIDPVLETAPRD- 61 + V R++ R + G + P+ L+ T TYL+G R +LID P Sbjct: 7 QRVERLSNRVVRVLGCNPGPMTLQ-------GTNTYLVGTGPRR--ILIDTGEPAIPEYI 57 Query: 62 ---AQLIKELGLRLLYAVNTHCHADHITGSG-LLRSLLPGCQSVISRL-----------S 106 Q + E + V TH H DH G G + +S+ I +L + Sbjct: 58 SCLKQALTEFNTAIQEIVVTHWHRDHSGGIGDICKSINNDTTYCIKKLPRNPQREEIIGN 117 Query: 107 GAQADLHIEDGDSIRFGRFALETRASPGHTPGCVTFVLNDHSMAFTGDALLIRGCGRTDF 166 G Q ++++DGD I+ L +PGHT + +L + + F+GD +L G G T F Sbjct: 118 GEQQYVYLKDGDVIKTEGATLRVLYTPGHTDDHMALLLEEENAIFSGDCIL--GEGTTVF 175 Query: 167 QQGCAKTLYHSVH--EKIFTLPGDCLIYPAH 195 + LY ++ +++ + D +IYP H Sbjct: 176 ED-----LYDYMNSLKELLKIKAD-IIYPGH 200 >2QED-A nrPDB Length = 258 Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 37/112 (33%), Positives = 55/112 (49%), Gaps = 8/112 (7%) Query: 114 IEDGDSIRFGRFALETRASPGHTPGCVTFVLNDHSMAFTGDALLIRGCGRTDFQQGCAKT 173 + DGD+IR A+PGHT G V + F GD L GCGR +G Sbjct: 96 VGDGDTIRVLGEKFTLFATPGHTLGHVCYF--SRPYLFCGDTLFSGGCGR--LFEGTPSQ 151 Query: 174 LYHSVHEKIFTLPGDCLIYPAHDYHGFTVSTVEEERTLNPRLTLSCEEFVKI 225 +Y S+ KI +LP D LI AH+Y T++ ++ ++ P + E + K+ Sbjct: 152 MYQSLM-KINSLPDDTLICCAHEY---TLANIKFALSILPHDSFINEYYRKV 199 >6N36-A nrPDB Length = 271 Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust. Identities = 16/37 (43%), Positives = 23/37 (62%) Query: 109 QADLHIEDGDSIRFGRFALETRASPGHTPGCVTFVLN 145 +AD + DGDSI+ G + R PGHTPG +F+ + Sbjct: 134 KADRLLHDGDSIQLGGMKIVMRQHPGHTPGANSFLFD 170 >3DAH-A nrPDB Length = 319 Score = 32.0 bits (71), Expect = 0.25, Method: Compositional matrix adjust. Identities = 20/60 (33%), Positives = 34/60 (56%), Gaps = 8/60 (13%) Query: 39 LLGDRESREAVLIDPVLETAP---RDAQLIKELGLRLLYAVNTH-----CHADHITGSGL 90 ++G+ E R V++D +++TA + AQ++KE G + ++A TH AD I S L Sbjct: 210 IIGEVEGRTCVIMDDMVDTAGTLCKAAQVLKERGAKQVFAYATHPVLSGGAADRIAASAL 269 >4Z42-C nrPDB Length = 572 Score = 32.0 bits (71), Expect = 0.27, Method: Compositional matrix adjust. Identities = 37/135 (27%), Positives = 55/135 (40%), Gaps = 10/135 (7%) Query: 70 LRLLYAVNTHCHADHITGSGLLRSLLPGCQSVISRLSGAQADLHIEDGDSIRFGRFALET 129 LR N H D+ G+L ++ V +RL +AD+ I DG G+ Sbjct: 51 LRDGMGANNHLTRDN----GVLDLVITNVTIVDARLGVIKADVGIRDGKIAGIGKSG-NP 105 Query: 130 RASPGHTPGCVTFVLNDHSMAFTGDALLIRGCG-RTDFQQGCAKTLYHSVHEKIFTLPGD 188 G TPG V V D A +G+ L++ G T + YH++ + T G Sbjct: 106 GVMDGVTPGLVVGVSTD---AISGEHLILTAAGIDTHIHLISPQQAYHALSNGVATFFGG 162 Query: 189 CLIYPAHDYHGFTVS 203 I P +G TV+ Sbjct: 163 G-IGPTDGTNGTTVT 176 >2Y8B-A nrPDB Length = 265 Score = 31.6 bits (70), Expect = 0.36, Method: Compositional matrix adjust. Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 17/96 (17%) Query: 43 RESREAVLIDPVL---ETAPRDAQLIKELGLRLLYAVNTHCHADHITGSGLLRSLLPGCQ 99 R++ E +LID T A++ K++GL + +++TH H D + G +LR+ G Sbjct: 74 RDADELLLIDTAWGAKNTVALLAEIEKQIGLPVTRSISTHFHDDRVGGVDVLRA--AGVA 131 Query: 100 SVISRLS-------GAQADLH-----IEDGDSIRFG 123 + S L+ G + H GD +RFG Sbjct: 132 TYTSPLTRQLAEAAGNEVPAHSLKALSSSGDVVRFG 167 >3DHA-A nrPDB Length = 254 Score = 30.4 bits (67), Expect = 0.81, Method: Compositional matrix adjust. Identities = 26/105 (24%), Positives = 45/105 (42%), Gaps = 22/105 (20%) Query: 51 IDPVLETAPRDAQLIKELGLR---LLYAVNTHCHADHITGSGLLRSLLPGCQSVISRLSG 107 I P + R ++K +G LLY +++H H DH G+G + +I + + Sbjct: 77 ILPKMTEEDRIVNILKRVGYEPDDLLYIISSHLHFDHAGGNGAFTN-----TPIIVQRTE 131 Query: 108 AQADLHIED----------GDSIRFGRF----ALETRASPGHTPG 138 +A LH E+ I G + ++ +PGH+PG Sbjct: 132 YEAALHREEYMKECILPHLNYKIIEGDYEVVPGVQLLYTPGHSPG 176 >5BT1-C nrPDB Length = 143 Score = 30.4 bits (67), Expect = 0.86, Method: Compositional matrix adjust. Identities = 25/69 (36%), Positives = 39/69 (56%), Gaps = 4/69 (5%) Query: 5 VLRVARR-QLSQRGGSGAPILLRQMFEPVSCTFTYLLGD--RESREAVLIDPVLETAPR- 60 V R+ RR +QR GSGAP+ L + E ++ L G+ R++++ +I L+ A R Sbjct: 43 VHRLLRRGNYAQRIGSGAPVYLTAVLEYLAAEILELAGNAARDNKKTRIIPRHLQLAIRN 102 Query: 61 DAQLIKELG 69 D +L K LG Sbjct: 103 DDELNKLLG 111 >3ADR-A nrPDB Length = 261 Score = 30.0 bits (66), Expect = 1.0, Method: Compositional matrix adjust. Identities = 24/69 (34%), Positives = 33/69 (47%), Gaps = 7/69 (10%) Query: 49 VLIDPVLETAPRDAQLIKELGLRLLYAVNTHCHADHITGSGLLRSLLPGCQSVISRLSGA 108 V+ID + + D + +L Y V TH H DHI GLL LL ++ + SG Sbjct: 32 VMIDAGVSNSIADFSFLDKLD----YIVLTHLHIDHI---GLLPELLQVYKAKVLVKSGF 84 Query: 109 QADLHIEDG 117 + L EDG Sbjct: 85 KKYLTSEDG 93 >1DKU-A nrPDB Length = 317 Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust. Identities = 20/72 (27%), Positives = 37/72 (51%), Gaps = 3/72 (4%) Query: 11 RQLSQRGGSGAPILLRQMFEPVSCTFTYLLGDRESREAVLIDPVLETA---PRDAQLIKE 67 R+L+ R + I+ ++ P ++G+ E + A+LID +++TA A + E Sbjct: 183 RKLADRLKAPIAIIDKRRPRPNVAEVMNIVGNIEGKTAILIDDIIDTAGTITLAANALVE 242 Query: 68 LGLRLLYAVNTH 79 G + +YA TH Sbjct: 243 NGAKEVYACCTH 254 >5HH5-A nrPDB Length = 271 Score = 29.3 bits (64), Expect = 1.5, Method: Compositional matrix adjust. Identities = 26/108 (24%), Positives = 36/108 (33%), Gaps = 30/108 (27%) Query: 59 PRDAQLIKELGLRLLYAVNTHCHADHITGSGLLR-----SLLPGCQSVISRLSGAQADLH 113 PRD +LI + +H HADH L+ + +S + G DLH Sbjct: 76 PRDLRLI----------LLSHAHADHAGPVAELKRRTGAKVAANAESAVLLARGGSDDLH 125 Query: 114 ---------------IEDGDSIRFGRFALETRASPGHTPGCVTFVLND 146 + DG+ I G GHTPG + D Sbjct: 126 FGDGITYPPANADRIVMDGEVITVGGIVFTAHFMAGHTPGSTAWTWTD 173 >4S2U-A nrPDB Length = 316 Score = 28.9 bits (63), Expect = 2.0, Method: Compositional matrix adjust. Identities = 14/45 (31%), Positives = 28/45 (62%), Gaps = 3/45 (6%) Query: 38 YLLGDRESREAVLIDPVLETAP---RDAQLIKELGLRLLYAVNTH 79 +++GD R+ VL+D +++T + A+ +KE G + ++A TH Sbjct: 207 HIIGDVAGRDCVLVDDMIDTGGTLCKAAEALKERGAKRVFAYATH 251 >1BOU-B nrPDB Length = 302 Score = 28.9 bits (63), Expect = 2.3, Method: Compositional matrix adjust. Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 7/42 (16%) Query: 133 PGHTPGCVTFVLNDHSMAFTGDALLIRGCGRTDFQQGCAKTL 174 PG+ P V V NDH+ AF + + F GCA+T Sbjct: 47 PGNMPDVVILVYNDHASAFDMNII-------PTFAIGCAETF 81 >5VEY-A nrPDB Length = 194 Score = 28.5 bits (62), Expect = 2.6, Method: Compositional matrix adjust. Identities = 20/59 (33%), Positives = 34/59 (57%), Gaps = 3/59 (5%) Query: 14 SQRGGSGAPILLRQMFEPVSCTFTYLLGD--RESREAVLIDPVLETAPR-DAQLIKELG 69 S+R G+GAP+ L + E ++ L G+ R++++ +I L+ A R D +L K LG Sbjct: 129 SERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLG 187 >5KKP-A nrPDB Length = 563 Score = 27.7 bits (60), Expect = 4.8, Method: Compositional matrix adjust. Identities = 14/58 (24%), Positives = 28/58 (48%), Gaps = 2/58 (3%) Query: 138 GCVTFVLNDHSMAFTGDALLIRGCGRTDFQQGCAKTLYHSVHEKIFTLPGDCLIYPAH 195 V+ + D+ + L+++G T ++ +S+H+ + LPG +IYP H Sbjct: 388 NMVSKRIEDYGLKPVPGDLVLKGATATYIEEDDVNN--YSIHDVVMPLPGFDVIYPKH 443 >2F8N-K nrPDB Length = 149 Score = 27.7 bits (60), Expect = 5.0, Method: Compositional matrix adjust. Identities = 20/59 (33%), Positives = 34/59 (57%), Gaps = 3/59 (5%) Query: 14 SQRGGSGAPILLRQMFEPVSCTFTYLLGD--RESREAVLIDPVLETAPR-DAQLIKELG 69 S+R G+GAP+ L + E ++ L G+ R++++ +I L+ A R D +L K LG Sbjct: 60 SERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLG 118 >2CBF-A nrPDB Length = 234 Score = 27.7 bits (60), Expect = 5.4, Method: Compositional matrix adjust. Identities = 19/79 (24%), Positives = 34/79 (43%), Gaps = 11/79 (13%) Query: 54 VLETAPRDAQLIKELGLRLLYAVNTHCHADHITGSGLLRSLLPGCQSVISRLSGAQADLH 113 ++ P D LI GL+LL + +AD + L+ PG + + A +H Sbjct: 8 IIGAGPGDPDLITVKGLKLLQQADVVLYADSLVSQDLIAKSKPGAEVL------KTAGMH 61 Query: 114 IEDG-----DSIRFGRFAL 127 +E+ D +R G+ + Sbjct: 62 LEEMVGTMLDRMREGKMVV 80 >1CBF-A nrPDB Length = 285 Score = 27.3 bits (59), Expect = 5.9, Method: Compositional matrix adjust. Identities = 19/79 (24%), Positives = 35/79 (44%), Gaps = 11/79 (13%) Query: 54 VLETAPRDAQLIKELGLRLLYAVNTHCHADHITGSGLLRSLLPGCQSVISRLSGAQADLH 113 ++ P D LI GL+LL + +AD + L+ PG + + + A +H Sbjct: 25 IIGAGPGDPDLITVKGLKLLQQADVVLYADSLVSQDLIAKSKPGAEVLKT------AGMH 78 Query: 114 IEDG-----DSIRFGRFAL 127 +E+ D +R G+ + Sbjct: 79 LEEMVGTMLDRMREGKMVV 97 >2XQL-A nrPDB Length = 91 Score = 26.9 bits (58), Expect = 7.5, Method: Compositional matrix adjust. Identities = 19/59 (32%), Positives = 34/59 (57%), Gaps = 3/59 (5%) Query: 14 SQRGGSGAPILLRQMFEPVSCTFTYLLGD--RESREAVLIDPVLETAPR-DAQLIKELG 69 ++R G+GAP+ L + E ++ L G+ R++++ +I L+ A R D +L K LG Sbjct: 26 AERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLG 84 >3LZ1-C nrPDB Length = 119 Score = 26.6 bits (57), Expect = 9.9, Method: Compositional matrix adjust. Identities = 19/59 (32%), Positives = 34/59 (57%), Gaps = 3/59 (5%) Query: 14 SQRGGSGAPILLRQMFEPVSCTFTYLLGD--RESREAVLIDPVLETAPR-DAQLIKELG 69 ++R G+GAP+ L + E ++ L G+ R++++ +I L+ A R D +L K LG Sbjct: 40 AERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLG 98 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 4CHL-A nrPDB 364 e-101 1QH5-A nrPDB 266 8e-72 1XM8-A nrPDB 225 1e-59 4AD9-A nrPDB 194 3e-50 2P18-A nrPDB 191 3e-49 2QED-A nrPDB 171 2e-43 6N36-A nrPDB 66 2e-11 Sequences not found previously or not previously below threshold: 3DHA-A nrPDB 51 6e-07 2Q0J-A nrPDB 50 1e-06 3L6N-A nrPDB 47 7e-06 6DJA-A nrPDB 46 2e-05 1M2X-A nrPDB 46 2e-05 3ZNB-A nrPDB 45 3e-05 2OHJ-A nrPDB 45 3e-05 4F6Z-A nrPDB 44 6e-05 3ADR-A nrPDB 44 7e-05 2UYX-A nrPDB 44 7e-05 3SD9-A nrPDB 43 9e-05 2Y8B-A nrPDB 42 2e-04 6ETB-A nrPDB 42 2e-04 4D02-A nrPDB 42 2e-04 1X8H-A nrPDB 41 4e-04 5HH5-A nrPDB 41 6e-04 5B3R-A nrPDB 41 6e-04 6FRM-A nrPDB 41 7e-04 2YNV-A nrPDB 39 0.002 4UBQ-A nrPDB 39 0.003 5K4M-A nrPDB 36 0.024 5A0V-A nrPDB 35 0.041 3AJ3-A nrPDB 33 0.14 5NBK-A nrPDB 32 0.17 2BZ0-A nrPDB 32 0.23 5HAA-A nrPDB 32 0.28 6H0D-A nrPDB 32 0.29 4XWT-A nrPDB 31 0.67 6NBQ-S nrPDB 30 1.3 5L2Q-C nrPDB 30 1.3 3ZQ4-A nrPDB 30 1.3 3TX2-A nrPDB 29 1.6 5OJG-A nrPDB 29 2.0 5ZDO-A nrPDB 29 2.7 5X0Y-O nrPDB 28 3.8 2CG3-A nrPDB 28 4.1 2MOU-A nrPDB 28 5.1 4PDX-A nrPDB 27 5.4 3N05-A nrPDB 27 6.1 >4CHL-A nrPDB Length = 238 Score = 364 bits (933), Expect = e-101, Method: Composition-based stats. Identities = 235/238 (98%), Positives = 235/238 (98%) Query: 17 GGSGAPILLRQMFEPVSCTFTYLLGDRESREAVLIDPVLETAPRDAQLIKELGLRLLYAV 76 G APILLRQMFEPVSCTFTYLLGDRESREAVLIDPVLETAPRDAQLIKELGLRLLYAV Sbjct: 1 GPVDAPILLRQMFEPVSCTFTYLLGDRESREAVLIDPVLETAPRDAQLIKELGLRLLYAV 60 Query: 77 NTHCHADHITGSGLLRSLLPGCQSVISRLSGAQADLHIEDGDSIRFGRFALETRASPGHT 136 NTHCHADHITGSGLLRSLLPGCQSVISRLSGAQADLHIEDGDSIRFGRFALETRASPGHT Sbjct: 61 NTHCHADHITGSGLLRSLLPGCQSVISRLSGAQADLHIEDGDSIRFGRFALETRASPGHT 120 Query: 137 PGCVTFVLNDHSMAFTGDALLIRGCGRTDFQQGCAKTLYHSVHEKIFTLPGDCLIYPAHD 196 PGCVTFVLNDHSMAFTGDALLIRGCGRTDFQQGCAKTLYHSVHEKIFTLPGDCLIYPAHD Sbjct: 121 PGCVTFVLNDHSMAFTGDALLIRGCGRTDFQQGCAKTLYHSVHEKIFTLPGDCLIYPAHD 180 Query: 197 YHGFTVSTVEEERTLNPRLTLSCEEFVKIMGNLNLPKPQQIDFAVPANMRCGVQTPTA 254 YHGFTVSTVEEERTLNPRLTLSCEEFVKIMGNLNLPKPQQIDFAVPANMRCGVQTPTA Sbjct: 181 YHGFTVSTVEEERTLNPRLTLSCEEFVKIMGNLNLPKPQQIDFAVPANMRCGVQTPTA 238 >1QH5-A nrPDB Length = 260 Score = 266 bits (679), Expect = 8e-72, Method: Composition-based stats. Identities = 58/229 (25%), Positives = 104/229 (45%), Gaps = 21/229 (9%) Query: 35 TFTYLLGDRESREAVLIDPVLETAPRDAQLIKELGLRLLYAVNTHCHADHITGSGLLRSL 94 + YL+ D E++EA ++DPV DA ++ G++L + TH H DH G+ L L Sbjct: 12 NYMYLVIDDETKEAAIVDPVQPQKVVDAA--RKHGVKLTTVLTTHHHWDHAGGNEKLVKL 69 Query: 95 LPGCQSVISRLSGAQADLHIEDGDSIRFGRFALETRASPGHTPGCVTFVL-----NDHSM 149 G + I +++ G ++ A+P HT G + + + ++ Sbjct: 70 ESGLKVYGGDDRIGALTHKITHLSTLQVGSLNVKCLATPCHTSGHICYFVSKPGGSEPPA 129 Query: 150 AFTGDALLIRGCGRTDFQQGCAKTLYHSVHEKIFTLPGDCLIYPAHDYHGFTVSTVEEER 209 FTGD L + GCG+ F +G A + ++ E + LP D +Y H+Y T++ ++ R Sbjct: 130 VFTGDTLFVAGCGK--FYEGTADEMCKALLEVLGRLPPDTRVYCGHEY---TINNLKFAR 184 Query: 210 TLNP-------RLTLSCEEFVKIMGNLNLPKPQQIDFAVPANMRCGVQT 251 + P +L + E++ +G +P +F MR +T Sbjct: 185 HVEPGNAAIREKLAWAKEKYS--IGEPTVPSTLAEEFTYNPFMRVREKT 231 >1XM8-A nrPDB Length = 254 Score = 225 bits (573), Expect = 1e-59, Method: Composition-based stats. Identities = 55/221 (24%), Positives = 97/221 (43%), Gaps = 19/221 (8%) Query: 35 TFTYLLGDRESREAVLIDPVLETAPRDAQLIKELGLRLLYAVNTHCHADHITGSGLLRSL 94 + Y+L D ++ ++DP D+ +K G L Y +NTH H DH G+ L+ Sbjct: 12 NYAYILHDEDTGTVGVVDPSEAEPIIDS--LKRSGRNLTYILNTHHHYDHTGGNLELKDR 69 Query: 95 LPGCQSVISRLSGAQA---DLHIEDGDSIRFGRFALETRASPGHTPGCVTFVLNDHSMAF 151 G + + S + + D+ ++DGD F + +PGHT G ++ F Sbjct: 70 Y-GAKVIGSAMDKDRIPGIDMALKDGDKWMFAGHEVHVMDTPGHTKGHISLYFPGSRAIF 128 Query: 152 TGDALLIRGCGRTDFQQGCAKTLYHSVHEKIFTLPGDCLIYPAHDYHGFTVSTVEEERTL 211 TGD + CG+ +G K + S+ +KI +LP D IY H+Y T+S + +L Sbjct: 129 TGDTMFSLSCGK--LFEGTPKQMLASL-QKITSLPDDTSIYCGHEY---TLSNSKFALSL 182 Query: 212 NPRLTLSCEEFVKIMGN------LNLPKPQQIDFAVPANMR 246 P + + + + +P +++ A +R Sbjct: 183 EPNNEVL-QSYAAHVAELRSKKLPTIPTTVKMEKACNPFLR 222 >4AD9-A nrPDB Length = 289 Score = 194 bits (493), Expect = 3e-50, Method: Composition-based stats. Identities = 56/211 (26%), Positives = 92/211 (43%), Gaps = 35/211 (16%) Query: 3 EAVLRVARRQLSQRGGSGAPILLRQMFEPVSCTFTYLLGDRESREAVLIDPVLETAPRD- 61 + V R++ R + G + P+ L+ T TYL+G R +LID P Sbjct: 7 QRVERLSNRVVRVLGCNPGPMTLQ-------GTNTYLVGTGPRR--ILIDTGEPAIPEYI 57 Query: 62 ---AQLIKELGLRLLYAVNTHCHADHITGSG-LLRSLLPGCQSVISRL-----------S 106 Q + E + V TH H DH G G + +S+ I +L + Sbjct: 58 SCLKQALTEFNTAIQEIVVTHWHRDHSGGIGDICKSINNDTTYCIKKLPRNPQREEIIGN 117 Query: 107 GAQADLHIEDGDSIRFGRFALETRASPGHTPGCVTFVLNDHSMAFTGDALLIRGCGRTDF 166 G Q ++++DGD I+ L +PGHT + +L + + F+GD +L G G T F Sbjct: 118 GEQQYVYLKDGDVIKTEGATLRVLYTPGHTDDHMALLLEEENAIFSGDCIL--GEGTTVF 175 Query: 167 QQGCAKTLYHSVH--EKIFTLPGDCLIYPAH 195 + LY ++ +++ + D +IYP H Sbjct: 176 ED-----LYDYMNSLKELLKIKAD-IIYPGH 200 >2P18-A nrPDB Length = 311 Score = 191 bits (485), Expect = 3e-49, Method: Composition-based stats. Identities = 54/248 (21%), Positives = 93/248 (37%), Gaps = 37/248 (14%) Query: 35 TFTYLLGDRESREAVLIDPVLETAPR----DAQLIKELGLRLLY----AVNTHCHADHIT 86 F+YL+ D + +D + P + L ++ + Y ++TH H DH Sbjct: 40 NFSYLINDHTTHTLAAVDVNADYKPILTYIEEHLKQQGNADVTYTFSTILSTHKHWDHSG 99 Query: 87 GSGLLRSLLPGCQSVISRL--SGAQADLH-----IEDGDSIRFGRFALETRASPGHTPGC 139 G+ L++ L S + + GA + + +GD ++ G ++E +P HT G Sbjct: 100 GNAKLKAELEAMNSTVPVVVVGGANDSIPAVTKPVREGDRVQVGDLSVEVIDAPCHTRGH 159 Query: 140 VTFVL------NDHSMAFTGDALLIRGCGRTDFQQGCAKTL-------YHSVHEKIFTLP 186 V + + ND FTGD + I G G F +G K + YH + L Sbjct: 160 VLYKVQHPQHPNDGVALFTGDTMFIAGIGA--FFEGDEKDMCRAMEKVYHIHKGNDYALD 217 Query: 187 GDCLIYPAHDYHG--FTVSTVEEERTLNPRLTLSCEEFVKI-----MGNLNLPKPQQIDF 239 I+P H+Y T S + L + K G+ ++P + Sbjct: 218 KVTFIFPGHEYTSGFMTFSEKTFPDRASDDLAFIQAQRAKYAAAVKTGDPSVPSSLAEEK 277 Query: 240 AVPANMRC 247 +R Sbjct: 278 RQNLFLRV 285 >2QED-A nrPDB Length = 258 Score = 171 bits (434), Expect = 2e-43, Method: Composition-based stats. Identities = 58/218 (26%), Positives = 90/218 (41%), Gaps = 17/218 (7%) Query: 35 TFTYLLGDRESREAVLIDPVLETAPRDAQLIKELGLRLLYAVNTHCHADHITGSGLLRSL 94 + ++L + E R V++DP A I E TH H DH+ G L Sbjct: 19 NYIWVLTNDEGR-CVIVDPGEAAPVLKA--IAEHKWMPEAIFLTHHHHDHVGGVKELLQH 75 Query: 95 LPGCQSVISRLSGAQ-ADLHIEDGDSIRFGRFALETRASPGHTPGCVTFVLNDHSMAFTG 153 P + + A + DGD+IR A+PGHT G V + F G Sbjct: 76 FPQMTVYGPAETQDKGATHLVGDGDTIRVLGEKFTLFATPGHTLGHVCYF--SRPYLFCG 133 Query: 154 DALLIRGCGRTDFQQGCAKTLYHSVHEKIFTLPGDCLIYPAHDYHGFTVSTVEEERTLNP 213 D L GCGR +G +Y S+ KI +LP D LI AH+Y T++ ++ ++ P Sbjct: 134 DTLFSGGCGR--LFEGTPSQMYQSLM-KINSLPDDTLICCAHEY---TLANIKFALSILP 187 Query: 214 RLTLSCEEFVK-----IMGNLNLPKPQQIDFAVPANMR 246 + E + K + + LP + + + +R Sbjct: 188 HDSFINEYYRKVKELRVKKQMTLPVILKNERKINLFLR 225 >6N36-A nrPDB Length = 271 Score = 65.6 bits (158), Expect = 2e-11, Method: Composition-based stats. Identities = 32/174 (18%), Positives = 53/174 (30%), Gaps = 52/174 (29%) Query: 71 RLLYAVNTHCHADHITGSGLLRSLLPGCQSVISRL-----SGAQ---------------- 109 + + TH H DH+ ++ V + G Sbjct: 75 DIRILLTTHAHYDHVGAMAAVKQQTHAKMMVNEKDAALLADGGNSDYVMGGKGSMFLPVK 134 Query: 110 ADLHIEDGDSIRFGRFALETRASPGHTPGCVTFVLNDHSMAFTGDALLIRGCGRTDFQQG 169 AD + DGDSI+ G + R PGHTPG +F+ + T Sbjct: 135 ADRLLHDGDSIQLGGMKIVMRQHPGHTPGANSFLFDVKDAVRT----------------- 177 Query: 170 CAKTLYHSVHEKIFTLPGDCL-----IYP----AHDYHGFTVSTVEEERTLNPR 214 Y + I ++ D +YP + Y + ++ + L P Sbjct: 178 -----YKVLIANIPSILNDTKLSGMPLYPEVGKDYAYTLKAMKALKFDLWLAPH 226 >3DHA-A nrPDB Length = 254 Score = 50.6 bits (119), Expect = 6e-07, Method: Composition-based stats. Identities = 36/199 (18%), Positives = 68/199 (34%), Gaps = 30/199 (15%) Query: 21 APILLRQMFEPVSCTFTYLLGDRESREAVLIDPVLETAPRDAQLIKELGL---RLLYAVN 77 PIL+ + L +L E + ++K +G LLY ++ Sbjct: 49 GPILVDTGMPESAVNNEGLFNGTFVEGQILPKMTEEDRIVN--ILKRVGYEPDDLLYIIS 106 Query: 78 THCHADHITGSGLL--------RSLLPGC---QSVISRLSGAQADLHIEDGDSIRFGRFA 126 +H H DH G+G R+ + + + I +GD Sbjct: 107 SHLHFDHAGGNGAFTNTPIIVQRTEYEAALHREEYMKECILPHLNYKIIEGDYEVVPG-- 164 Query: 127 LETRASPGHTPGCVTFVLNDHSMAFTGDALLI--RGCGRTDFQQ-----GCAKTLYHSVH 179 ++ +PGH+PG + + +G LL + +F+ G L S Sbjct: 165 VQLLYTPGHSPGHQSLFIETEQ---SGSVLLTIDASYTKENFEDEVPFAGFDPELALSSI 221 Query: 180 EKIFTL--PGDCLIYPAHD 196 +++ + +I+ HD Sbjct: 222 KRLKEVVKKEKPIIFFGHD 240 >2Q0J-A nrPDB Length = 321 Score = 49.8 bits (117), Expect = 1e-06, Method: Composition-based stats. Identities = 32/161 (19%), Positives = 49/161 (30%), Gaps = 36/161 (22%) Query: 71 RLLYAVNTHCHADHITGSGLLRSLLPGCQSVISR----------------------LSGA 108 ++ Y + TH H DH L LP Q + S L Sbjct: 81 QVHYWLITHKHYDHCGLLPYLCPRLPNVQVLASERTCQAWKSESAVRVVERLNRQLLRAE 140 Query: 109 QA-----------DLHIEDGDSIRFG-RFALETRASPGHTPGCVTFVLNDHSMAFTGDAL 156 Q + DG+ + G R L+ + GH+ V F F GDAL Sbjct: 141 QRLPEACAWDALPVRAVADGEWLELGPRHRLQVIEAHGHSDDHVVFYDVRRRRLFCGDAL 200 Query: 157 LIRGCGRTDFQQGCAKTLYHSV--HEKIFTLPGDCLIYPAH 195 ++ + + E++ LP + P H Sbjct: 201 GEFDEAEGVWRPLVFDDMEAYLESLERLQRLPTLLQLIPGH 241 >3L6N-A nrPDB Length = 219 Score = 47.1 bits (110), Expect = 7e-06, Method: Composition-based stats. Identities = 31/177 (17%), Positives = 51/177 (28%), Gaps = 18/177 (10%) Query: 33 SCTFTYLLGDRESREAVLIDP----VLETAPRDAQLIKELGLRLLYAVNTHCHADHIT-- 86 S YL+ + VL D V + D + K L ++ TH H D Sbjct: 30 SANSMYLV---TKKGVVLFDVPWEKVQYQSLMDT-IKKRHNLPVVAVFATHSHDDRAGDL 85 Query: 87 ----GSGLLRSLLPGCQSVISRLSGAQADLHIEDGDSIRFGRFALET-RASPGHTPGCVT 141 G+ + + A + I+ G R G GHT V Sbjct: 86 SFFNNKGIKTYATAKTNEFLKKDGKATSTEIIKTGKPYRIGGEEFVVDFLGEGHTADNVV 145 Query: 142 FVLNDHSMAFTGDALLIRGCGRTDFQ--QGCAKTLYHSVHEKIFTLPGDCLIYPAHD 196 ++ G L+ + + ++++ LI P HD Sbjct: 146 VWFPKYN-VLDGGCLVKSNSATDLGYIKEANVEQWPKTINKLKAKYSKATLIIPGHD 201 >6DJA-A nrPDB Length = 222 Score = 45.9 bits (107), Expect = 2e-05, Method: Composition-based stats. Identities = 34/167 (20%), Positives = 59/167 (35%), Gaps = 17/167 (10%) Query: 43 RESREAVLIDPVLE---TAPRDAQLIKELGLRLLYAVNTHCHADHITGSGLLRSLLPGCQ 99 S+ VL+D + T + K+ R+ + TH HAD I G L+ G + Sbjct: 42 NTSKGLVLVDSSWDDKLTKELIEMVEKKFKKRVTDVIITHAHADRIGGMKTLKER--GIK 99 Query: 100 SVISRLSGAQA-----DLHIEDGDSI---RFGRFALETRA-SPGHTPGCVTFVLNDHSMA 150 + + L+ A + + D S+ +FG +ET GHT + L + Sbjct: 100 AHSTALTAELAKKNGYEEPLGDLQSVTNLKFGNMKVETFYPGKGHTEDNIVVWLPQYQ-I 158 Query: 151 FTGDALLIRGCGRT--DFQQGCAKTLYHSVHEKIFTLPGDCLIYPAH 195 G L+ + + S+ + L+ P H Sbjct: 159 LAGGCLVKSASSKDLGNVADAYVNEWSTSIENVLKRYGNINLVVPGH 205 >1M2X-A nrPDB Length = 223 Score = 45.5 bits (106), Expect = 2e-05, Method: Composition-based stats. Identities = 35/204 (17%), Positives = 68/204 (33%), Gaps = 23/204 (11%) Query: 33 SCTFTYLLGDRESREAVLIDP---VLETAPRDAQLIKELGLRLLYAVNTHCHADHITGSG 89 + YL+ D + V+ID + ++ K+ G +++ + TH H D G Sbjct: 26 AANAVYLVTD---KGVVVIDCPWGEDKFKSFTDEIYKKHGKKVIMNIATHSHDDRAGGLE 82 Query: 90 LLRSL------LPGCQSVISRLSGAQADLHIEDGDSIRFGRFALETRA-SPGHTPGCVTF 142 + S++++ + +A ++ S + G+ + GHT V Sbjct: 83 YFGKIGAKTYSTKMTDSILAKENKPRAQYTFDNNKSFKVGKSEFQVYYPGKGHTADNVVV 142 Query: 143 VLNDHSMAFTGDALLIRGCGRTDFQQGCA--KTLYHSVHEKIFTLPGDCLIYPAHDYHGF 200 G ++ + G A SVH G + HD Sbjct: 143 WFPKEK-VLVGGCIIKSADSKDLGYIGEAYVNDWTQSVHNIQQKFSGAQYVVAGHD---- 197 Query: 201 TVSTVEEERTLNPRLTLSCEEFVK 224 +++R++ L L E K Sbjct: 198 ---DWKDQRSIQHTLDLINEYQQK 218 >3ZNB-A nrPDB Length = 232 Score = 45.2 bits (105), Expect = 3e-05, Method: Composition-based stats. Identities = 32/176 (18%), Positives = 57/176 (32%), Gaps = 26/176 (14%) Query: 46 REAVLIDPVLETAPRDAQLIKELG-------LRLLYAVNTHCHADHITGSGLLRSLLPGC 98 +A L+D T DAQ + ++ + H H D I G G L+ G Sbjct: 46 HQAALLD----TPINDAQTETLVNWVADSLHAKVTTFIPNHWHGDCIGGLGYLQK--KGV 99 Query: 99 QSVISRLSGAQA--------DLHIEDGDSIRFGRFALETRA-SPGHTPGCVTFVLNDHSM 149 QS ++++ A + D ++ L+ GH + L ++ Sbjct: 100 QSYANQMTIDLAKEKGLPVPEHGFTDSLTVSLDGMPLQCYYLGGGHATDNIVVWLPTENI 159 Query: 150 AFTGDALLIRGCGRTD--FQQGCAKTLYHSVHEKIFTLPGDCLIYPAH-DYHGFTV 202 F G +L + ++ + P + P H DY G + Sbjct: 160 LF-GGCMLKDNQATSIGNISDADVTAWPKTLDKVKAKFPSARYVVPGHGDYGGTEL 214 >2OHJ-A nrPDB Length = 404 Score = 45.2 bits (105), Expect = 3e-05, Method: Composition-based stats. Identities = 26/139 (18%), Positives = 45/139 (32%), Gaps = 20/139 (14%) Query: 36 FTYLLGDRESREAVLIDPVLE------TAPRDAQLIKELGLRLLYAVNTHCHADHITGSG 89 YL+ E LID A + L + R+ Y + H DH Sbjct: 36 NAYLVCGDE--GVALIDNSYPGTFDELMARVEDALQQVGMERVDYIIQNHVEKDHSGVLV 93 Query: 90 LLRSLLPGCQSVISRLSG-----------AQADLHIEDGDSIRFGRFALETRASP-GHTP 137 L P + ++ + ++ GD + G L +P H P Sbjct: 94 ELHRRFPEAPIYCTEVAVKGLLKHYPSLREAEFMTVKTGDVLDLGGKTLTFLETPLLHWP 153 Query: 138 GCVTFVLNDHSMAFTGDAL 156 + +L++ + F+ DA Sbjct: 154 DSMFTLLDEDGILFSNDAF 172 >4F6Z-A nrPDB Length = 236 Score = 44.0 bits (102), Expect = 6e-05, Method: Composition-based stats. Identities = 27/125 (21%), Positives = 44/125 (35%), Gaps = 10/125 (8%) Query: 47 EAVLIDPVLETAPRDAQL--IKELGLRLLYAVNTHCHADHITGSGLLRSLL------PGC 98 EA LID + + E G ++ ++++H H+D G L S Sbjct: 43 EAYLIDTPFTAKDTEKLVTWFVERGYKIKGSISSHFHSDSTGGIEWLNSRSIPTYASELT 102 Query: 99 QSVISRLSGAQADLHIEDGDSIRFGRFALETRA-SPGHTPGCVTFVLNDHSMAFTGDALL 157 ++ + QA + +E PGHTP V L + + F G + Sbjct: 103 NELLKKDGKVQATNSFSGVNYWLVKN-KIEVFYPGPGHTPDNVVVWLPERKILFGGGFIK 161 Query: 158 IRGCG 162 G G Sbjct: 162 PYGLG 166 >3ADR-A nrPDB Length = 261 Score = 44.0 bits (102), Expect = 7e-05, Method: Composition-based stats. Identities = 28/144 (19%), Positives = 49/144 (34%), Gaps = 40/144 (27%) Query: 46 REAVLIDPVLETAPRDAQLIKELGLRLLYAVNTHCHADHIT------------------- 86 + V+ID + + D + + L Y V TH H DHI Sbjct: 29 KLTVMIDAGVSNSIADFSFLDK----LDYIVLTHLHIDHIGLLPELLQVYKAKVLVKSGF 84 Query: 87 -----GSGLLRSLLPGCQSVISRL---------SGAQADLHIEDG-DSIRFGRFALETRA 131 L+ L + V+ L Q + +G + G + + Sbjct: 85 KKYLTSEDGLKKLNESAEKVLGDLYYVYGGLEKKLDQDKVIEVEGNEEFDLGGYRMRLIY 144 Query: 132 SPGHTPGCVTFVLNDHSMAFTGDA 155 +PGH ++ +++D FTGD+ Sbjct: 145 TPGHARHHMSVLVDD--FLFTGDS 166 >2UYX-A nrPDB Length = 228 Score = 44.0 bits (102), Expect = 7e-05, Method: Composition-based stats. Identities = 31/167 (18%), Positives = 58/167 (34%), Gaps = 17/167 (10%) Query: 43 RESREAVLIDPVLE---TAPRDAQLIKELGLRLLYAVNTHCHADHITGSGLLRSLLPGCQ 99 S+ VL+D + T + K+ R+ + TH HA I G L+ G + Sbjct: 48 NTSKGLVLVDSSWDDKLTKELIEMVEKKFQKRVTDVIITHAHASRIGGIKTLKER--GIK 105 Query: 100 SVISRLSGAQA-----DLHIEDGDSI---RFGRFALETRA-SPGHTPGCVTFVLNDHSMA 150 + + L+ A + + D ++ +FG +ET GHT + L ++ Sbjct: 106 AHSTALTAELAKKNGYEEPLGDLQTVTNLKFGNMKVETFYPGKGHTEDNIVVWLPQYN-I 164 Query: 151 FTGDALLIRGCGRT--DFQQGCAKTLYHSVHEKIFTLPGDCLIYPAH 195 G L+ + + S+ + + P H Sbjct: 165 LVGGCLVKSTSAKDLGNVADAYVNEWSTSIENVLKRYRNINAVVPGH 211 >3SD9-A nrPDB Length = 233 Score = 43.2 bits (100), Expect = 9e-05, Method: Composition-based stats. Identities = 37/225 (16%), Positives = 68/225 (30%), Gaps = 38/225 (16%) Query: 21 APILLRQMFEPVSCTFTYLLGDRESREAVLIDPVLETAPRDAQLIKELGLRLLYAVNTHC 80 P+ + + E V +G ++ K L + +NT+ Sbjct: 13 GPLYIVEDKEYVQENSMVYIGTDGITIIGATWTPETAETLYKEIRKVSPLPINEVINTNY 72 Query: 81 HADHITGSGLLRSLLPGCQSVISRL-----------------SGAQADLHIEDG--DSIR 121 H D G+ ++L G + V +++ G ++E D++ Sbjct: 73 HTDRAGGNAYWKTL--GAKIVATQMTYDLQKSQWGSIVNFTRQGNNKYPNLEKSLPDTVF 130 Query: 122 FGRFALE------TRASPGHTPGCVTFVLNDHSMAFTGDALLIRGCGRTDFQQGCAKTLY 175 G F L+ HT + + + G+ +L G F Y Sbjct: 131 PGDFNLQNGSIRAMYLGEAHTKDGIFVYFPAERVLY-GNCILKENLGNMSFANRTE---Y 186 Query: 176 HSVHEKI------FTLPGDCLIYPAHDYHGFTVSTVEEERTLNPR 214 EK+ L D +I HD V ++ TL + Sbjct: 187 PKTLEKLKGLIEQGELKVDSII-AGHDTPIHDVGLIDHYLTLLEK 230 >2Y8B-A nrPDB Length = 265 Score = 42.5 bits (98), Expect = 2e-04, Method: Composition-based stats. Identities = 37/201 (18%), Positives = 74/201 (36%), Gaps = 21/201 (10%) Query: 11 RQLSQRGGSGAPILLRQMFEPVSCTFTYLLGDRESREAVLIDPV---LETAPRDAQLIKE 67 R G + I +++ + V + ++ D + E +LID T A++ K+ Sbjct: 44 RLYKIGDGVWSHIATQKLGDTVYSSNGLIVRDAD--ELLLIDTAWGAKNTVALLAEIEKQ 101 Query: 68 LGLRLLYAVNTHCHADHITGSGLLRS------LLPGCQSVISRLSGAQADLHIE----DG 117 +GL + +++TH H D + G +LR+ P + + ++ G Sbjct: 102 IGLPVTRSISTHFHDDRVGGVDVLRAAGVATYTSPLTRQLAEAAGNEVPAHSLKALSSSG 161 Query: 118 DSIRFGRFALETRASPG--HTPGCVTFVLNDHSMAFTGDALLIRG-CGRTDFQQGCAKTL 174 D +RFG +E PG H+ + + + F G A+ + Sbjct: 162 DVVRFG--PVEVFY-PGAAHSGDNLVVYVPAVRVLFGGCAVHEASRESAGNVADANLAEW 218 Query: 175 YHSVHEKIFTLPGDCLIYPAH 195 ++ P ++ P H Sbjct: 219 PATIKRIQQRYPEAEVVIPGH 239 >6ETB-A nrPDB Length = 412 Score = 42.1 bits (97), Expect = 2e-04, Method: Composition-based stats. Identities = 33/151 (21%), Positives = 55/151 (36%), Gaps = 18/151 (11%) Query: 33 SCTFTYLLGDRESREAVLIDPVLETAPRD--AQLIKELGL-RLLYAVNTHCHADHITGSG 89 S +YL+ + ++ VLID V R+ L E+ L + Y V H DH Sbjct: 33 SSYNSYLIREEKN---VLIDTVDHKFSREFVQNLRNEIDLADIDYIVINHAEEDHAGALT 89 Query: 90 LLRSLLPGCQSVISRLSGAQADLH----------IEDGDSIRFG-RFALETRASPG-HTP 137 L + +P + + + H ++ GD++ G L +P H P Sbjct: 90 ELMAQIPDTPIYCTANAIDSINGHHHHPEWNFNVVKTGDTLDIGNGKQLIFVETPMLHWP 149 Query: 138 GCVTFVLNDHSMAFTGDALLIRGCGRTDFQQ 168 + L ++ F+ DA C F Sbjct: 150 DSMMTYLTGDAVLFSNDAFGQHYCDEHLFND 180 >4D02-A nrPDB Length = 479 Score = 42.1 bits (97), Expect = 2e-04, Method: Composition-based stats. Identities = 33/151 (21%), Positives = 55/151 (36%), Gaps = 18/151 (11%) Query: 33 SCTFTYLLGDRESREAVLIDPVLETAPRD--AQLIKELGL-RLLYAVNTHCHADHITGSG 89 S +YL+ + ++ VLID V R+ L E+ L + Y V H DH Sbjct: 33 SSYNSYLIREEKN---VLIDTVDHKFSREFVQNLRNEIDLADIDYIVINHAEEDHAGALT 89 Query: 90 LLRSLLPGCQSVISRLSGAQADLH----------IEDGDSIRFG-RFALETRASPG-HTP 137 L + +P + + + H ++ GD++ G L +P H P Sbjct: 90 ELMAQIPDTPIYCTANAIDSINGHHHHPEWNFNVVKTGDTLDIGNGKQLIFVETPMLHWP 149 Query: 138 GCVTFVLNDHSMAFTGDALLIRGCGRTDFQQ 168 + L ++ F+ DA C F Sbjct: 150 DSMMTYLTGDAVLFSNDAFGQHYCDEHLFND 180 >1X8H-A nrPDB Length = 228 Score = 41.3 bits (95), Expect = 4e-04, Method: Composition-based stats. Identities = 38/169 (22%), Positives = 59/169 (34%), Gaps = 35/169 (20%) Query: 56 ETAPRDAQLIKELGLR-LLYAVNTHCHADHITGSGLLRSLLPGCQSVISRLSGAQA---- 110 +TA +LIK + + +L +NT+ H D G+ +S+ G + V +R + Sbjct: 44 DTARELHKLIKRVSRKPVLEVINTNYHTDRAGGNAYWKSI--GAKVVSTRQTRDLMKSDW 101 Query: 111 ---------------DLHI------EDGDSIRFGRFALETRASPGHTPGCVTFVLNDHSM 149 DL + DGD A P HTP + D + Sbjct: 102 AEIVAFTRKGLPEYPDLPLVLPNVVHDGDFTLQEGKVRAFYAGPAHTPDGIFVYFPDEQV 161 Query: 150 AFTGDALLIRGCGRTDFQQGCAKTLYHSVHEKI--FTLPGDCLIYPAHD 196 + G +L G F A Y E++ LP +I HD Sbjct: 162 LYGG-CILKEKLGNLSFADVKA---YPQTLERLKAMKLPIKTVI-GGHD 205 >5HH5-A nrPDB Length = 271 Score = 40.9 bits (94), Expect = 6e-04, Method: Composition-based stats. Identities = 22/99 (22%), Positives = 30/99 (30%), Gaps = 20/99 (20%) Query: 70 LRLLYAVNTHCHADHITGSGLLRSLLPG-----CQSVISRLSGAQADLH----------- 113 L + +H HADH L+ +S + G DLH Sbjct: 77 RDLRLILLSHAHADHAGPVAELKRRTGAKVAANAESAVLLARGGSDDLHFGDGITYPPAN 136 Query: 114 ----IEDGDSIRFGRFALETRASPGHTPGCVTFVLNDHS 148 + DG+ I G GHTPG + D Sbjct: 137 ADRIVMDGEVITVGGIVFTAHFMAGHTPGSTAWTWTDTR 175 >5B3R-A nrPDB Length = 228 Score = 40.5 bits (93), Expect = 6e-04, Method: Composition-based stats. Identities = 23/94 (24%), Positives = 35/94 (37%), Gaps = 8/94 (8%) Query: 67 ELGLRLLYAVNTHCHADHITGSGLLRSL------LPGCQSVISRLSGAQADLHIEDGDSI 120 E G R+ +++TH H D G L S ++ + + QA G S Sbjct: 65 EHGYRIKGSISTHFHGDSTAGIEWLNSQSISTYASELTNELLKKDNKVQATNSFS-GVSY 123 Query: 121 RFGRFALETRA-SPGHTPGCVTFVLNDHSMAFTG 153 + +E PGHT V L + + F G Sbjct: 124 SLIKNKIEVFYPGPGHTQDNVVVWLPEKKILFGG 157 >6FRM-A nrPDB Length = 410 Score = 40.5 bits (93), Expect = 7e-04, Method: Composition-based stats. Identities = 26/168 (15%), Positives = 50/168 (29%), Gaps = 21/168 (12%) Query: 36 FTYLLGDRESREAVLIDPVLET-------APRDAQLIKELGLRLLYAVNTHCHADHITGS 88 YL+ + LID +DA + ++ V H DH Sbjct: 36 NAYLVFGDDK--VALIDNTYPGTSAQMWGRIKDACEKEGREFKIDVIVQNHVEKDHSGAL 93 Query: 89 GLLRSLLPGCQSVISRLSGAQADLH-----------IEDGDSIRFGRFALETRASPG-HT 136 + P + ++ H ++ +SI G L +P H Sbjct: 94 PEIHKKFPEAPIYCTEVAVEGLVKHFPSLKGAPFKVVKSLESIDLGGKTLTFLEAPLLHW 153 Query: 137 PGCVTFVLNDHSMAFTGDALLIRGCGRTDFQQGCAKTLYHSVHEKIFT 184 P + + + + F+ DA C F + + ++K + Sbjct: 154 PDSMFTLYAEEGILFSNDAFGQHLCFTQRFDHEIPENILMDANQKFYA 201 >2YNV-A nrPDB Length = 233 Score = 39.0 bits (89), Expect = 0.002, Method: Composition-based stats. Identities = 31/171 (18%), Positives = 58/171 (33%), Gaps = 21/171 (12%) Query: 44 ESREAVLIDPVLETAP------RDAQLI----KELGLRLLYAVNTHCHADHITGSGLLRS 93 +S V++D D +L+ + G +++ +++TH H D G LL S Sbjct: 32 DSNGLVVLDNNQAYIIDTPWSEEDTKLLLSWATDRGYQVMASISTHSHEDRTAGIKLLNS 91 Query: 94 L------LPGCQSVISRLSGAQADLHIEDGDSIRFGRFALETRA-SPGHTPGCVTFVLND 146 + +++R + +D D G +E GHT + L Sbjct: 92 KSIPTYTSELTKKLLAREGKPVPTHYFKD-DEFTLGNGLIELYYPGAGHTEDNIVAWLPK 150 Query: 147 HSMAFTGDALLIRGCGRTDFQQGCA--KTLYHSVHEKIFTLPGDCLIYPAH 195 + F G L+ G A + S+ + ++ P H Sbjct: 151 SKILF-GGCLVRSHEWEGLGYVGDASISSWADSIKNIVSKKYPIQMVVPGH 200 >4UBQ-A nrPDB Length = 229 Score = 38.6 bits (88), Expect = 0.003, Method: Composition-based stats. Identities = 19/94 (20%), Positives = 31/94 (32%), Gaps = 8/94 (8%) Query: 67 ELGLRLLYAVNTHCHADHITGSGLLRSL------LPGCQSVISRLSGAQADLHIEDGDSI 120 E G ++ +++H H+D G L S ++ + QA Sbjct: 66 ERGYKIKGTISSHFHSDSTGGIEWLNSQSIPTYASELTNELLKKDGKVQAKNSFSGVSYW 125 Query: 121 RFGRFALETRA-SPGHTPGCVTFVLNDHSMAFTG 153 +E PGHT V L + + F G Sbjct: 126 LVKN-KIEVFYPGPGHTQDNVVVWLPEKKILFGG 158 >5K4M-A nrPDB Length = 245 Score = 35.5 bits (80), Expect = 0.024, Method: Composition-based stats. Identities = 34/208 (16%), Positives = 63/208 (30%), Gaps = 19/208 (9%) Query: 6 LRVARRQLSQRGGSGAPILLRQMFEPVSCTFTYLLGDRESREAVLIDPV---LETAPRDA 62 R Q + + L R+ +++D +TA Sbjct: 19 QRFGDPVFRQLAPNVWQHTSYLDMPGFGAVASNGLIVRDGGRVLMVDTAGTDAQTAQILK 78 Query: 63 QLIKELGLRLLYAVNTHCHADHITGSGLLRS------LLPGCQSVISRLSGAQADLHIED 116 + +E+ L + AV TH H D + G L + + R A + Sbjct: 79 WIKQEINLPVALAVVTHAHQDKMGGMDALHAAGIATYANALSNQLAPREGVVAAQHSLTF 138 Query: 117 GDSIRFGRFA------LETRA-SPGHTPGCVTFVLNDHSMAFTGDALLIRGCGRT--DFQ 167 + L+ PGHT +T ++ +AF G L+ ++ + Sbjct: 139 AATGWVEPATAPNFGPLKVFYPGPGHTSDNITVGIDGTDIAFGG-CLIRDSKAKSLGNLD 197 Query: 168 QGCAKTLYHSVHEKIFTLPGDCLIYPAH 195 + + SV P +I +H Sbjct: 198 EADTEHYAASVRAFGAAFPKASMIVMSH 225 >5A0V-A nrPDB Length = 561 Score = 34.8 bits (78), Expect = 0.041, Method: Composition-based stats. Identities = 28/116 (24%), Positives = 39/116 (33%), Gaps = 14/116 (12%) Query: 53 PVLETAPRDAQLIKELGLRLLYAVNTHCHADHITGSGLLRSLLPGCQSVISRLSGAQA-- 110 P ++ D I++ + V TH H DHI G L P + S+L+ A Sbjct: 58 PGIDLILPDFTSIRDRLDDIEGIVLTHGHEDHIGGVPFLLREKPDIPLIGSKLTLALIEA 117 Query: 111 ----------DLHIEDGDSIRFGRFALETRASPGHTPG--CVTFVLNDHSMAFTGD 154 L + +G R G F E A P V + TGD Sbjct: 118 KLQEHRIRPYTLEVAEGHRERVGPFDCEFVAVNHSIPDALAVAIRTPAGMVVHTGD 173 >3AJ3-A nrPDB Length = 274 Score = 32.8 bits (73), Expect = 0.14, Method: Composition-based stats. Identities = 23/134 (17%), Positives = 37/134 (27%), Gaps = 54/134 (40%) Query: 70 LRLLYAVNTHCHADHITGS----------------------------------------- 88 + VN+H H DH G+ Sbjct: 87 RDIDVVVNSHFHFDHCGGNKYFPHAKKICHRSEVPQACNPQPFEHLGYSDLSFSAEAAEA 146 Query: 89 -GLLRSLLPGCQSVISRLSGAQADLHIEDGDSIRFGRFALETRASPGHTPGCVTFVLNDH 147 G LL G S G D+ + G ++ ++PGH+ G + ++ Sbjct: 147 RGATAQLLEGTTRANSTFEGIDGDVDLARG---------VKLISTPGHSIGHYSLLVEFP 197 Query: 148 ---SMAFTGDALLI 158 + FT DA Sbjct: 198 RRKPILFTIDAAYT 211 >5NBK-A nrPDB Length = 251 Score = 32.5 bits (72), Expect = 0.17, Method: Composition-based stats. Identities = 39/184 (21%), Positives = 67/184 (36%), Gaps = 35/184 (19%) Query: 21 APILLRQMFEPVSCTFTYL------------LGDRESREAVLIDPV---LETAPRDAQLI 65 ++ RQ+ V +YL L R+ +++D +TA + Sbjct: 20 GDLVFRQLAPNVWQHTSYLDMPGFGAVASNGLIVRDGGRVLVVDTAWTDDQTAQILNWIK 79 Query: 66 KELGLRLLYAVNTHCHADHITGSGLLRSLLPGCQSVISRLSGA----------------Q 109 +E+ L + AV TH H D + G L + G + + LS Sbjct: 80 QEINLPVALAVVTHAHQDKMGGMDALHA--AGIATYANALSNQLAPQEGMVAAQHSLTFA 137 Query: 110 ADLHIEDGDSIRFGRFALETRASPGHTPGCVTFVLNDHSMAFTGDALLIRGCGRTDFQQG 169 A+ +E + FG + PGHT +T ++ +AF G L+ ++ G Sbjct: 138 ANGWVEPATAPNFGPLKV-FYPGPGHTSDNITVGIDGTDIAFGG-CLIKDSKAKSLGNLG 195 Query: 170 CAKT 173 A T Sbjct: 196 DADT 199 >2BZ0-A nrPDB Length = 196 Score = 32.1 bits (71), Expect = 0.23, Method: Composition-based stats. Identities = 34/166 (20%), Positives = 52/166 (31%), Gaps = 19/166 (11%) Query: 106 SGAQADLHIEDGDSIRFGRFAL-----ETRASPGHTPGCVTFVLNDHSMAFTGDALLIRG 160 A+A L GD + G L G G + HS TGDAL Sbjct: 5 RVAEAKLPTPWGDFLMVGFEELATGHDHVALVYGDISGHTPVLARVHSECLTGDALFSLR 64 Query: 161 CG---------RTDFQQGCAKTLYHSVHEKIFTLPGDCLIYPAHDYHGFTV-STVEEERT 210 C ++G LYH + L Y D TV + + Sbjct: 65 CDCGFQLEAALTQIAEEGRGILLYHRQEGRNIGLLNKIRAYALQDQGYDTVEANHQLGFA 124 Query: 211 LNPRLTLSCEEFVKIMG----NLNLPKPQQIDFAVPANMRCGVQTP 252 + R C + K++G L P++++ A + + P Sbjct: 125 ADERDFTLCADMFKLLGVNEVRLLTNNPKKVEILTEAGINIVERVP 170 >5HAA-A nrPDB Length = 470 Score = 31.7 bits (70), Expect = 0.28, Method: Composition-based stats. Identities = 12/56 (21%), Positives = 21/56 (37%) Query: 42 DRESREAVLIDPVLETAPRDAQLIKELGLRLLYAVNTHCHADHITGSGLLRSLLPG 97 D ++ ++ + A D ++ E+ + V TH H DHI L Sbjct: 67 DVDTDRMHSLELIEMGAIPDDTIMNEVNGNVRAIVCTHGHLDHIGAIPKLAHRYAA 122 >6H0D-A nrPDB Length = 403 Score = 31.7 bits (70), Expect = 0.29, Method: Composition-based stats. Identities = 35/152 (23%), Positives = 53/152 (34%), Gaps = 22/152 (14%) Query: 36 FTYLLGDRESREAVLIDPVLETAPRD--AQLIKELGLR-LLYAVNTHCHADHITGSGLLR 92 +YL+ + L DP E+ + LI+ L L L Y + H +A+ LL Sbjct: 40 NSYLISAD---KIALFDPPGESFTDNFVGTLIQRLDLNSLDYVILGHVNANRAHTLKLLL 96 Query: 93 SLLPGCQSVISRLSGAQADLHIEDG------------DSIRFG-RFALETRASPG-HTPG 138 SL P + S + + + D D + G L +P PG Sbjct: 97 SLAPQATIICSNPAAQNLEKLLADAEVNNPIQVMKGNDHLDLGRGHELTFIPTPSPRYPG 156 Query: 139 CVTFVLNDHSMAFTGDALLIRG-CGRTDFQQG 169 + + FT D L CG F +G Sbjct: 157 QLCTYDPRTEILFT-DKLFGAHVCGDQVFDEG 187 >4XWT-A nrPDB Length = 559 Score = 30.5 bits (67), Expect = 0.67, Method: Composition-based stats. Identities = 32/164 (19%), Positives = 55/164 (33%), Gaps = 19/164 (11%) Query: 65 IKELGLRLLYAVNTHCHADHITGSGLLRSLLPGCQSVISRLSGAQADLHIED-------- 116 + E ++ + TH H DHI G + + LP L+ A + + Sbjct: 70 LLEHQDKIKGWILTHGHEDHIGGLPYIFARLPRVPVYGLPLTLALVREKLSEFGLQDVDL 129 Query: 117 -----GDSIRFGRFALETRASPGHT-PGCVTFVLNDHS--MAFTGDALLIRGCGRTDFQQ 168 GD +RFG+ + H+ P ++L + TGD + G Sbjct: 130 REVTYGDEVRFGQSFVAEFFCMTHSIPDNAGYILKTPVGDVLHTGDFKIDPDVGTGAGIV 189 Query: 169 GCAKTLYHSVHEKIFTLPGDCLIYPAHDYHGFTVSTVEEERTLN 212 + + + + + L D + G T S E R L Sbjct: 190 SDLERVEQAGKDGVLLLISDST---NAERPGHTPSEAEIARNLE 230 >6NBQ-S nrPDB Length = 110 Score = 29.8 bits (65), Expect = 1.3, Method: Composition-based stats. Identities = 19/98 (19%), Positives = 38/98 (38%), Gaps = 5/98 (5%) Query: 50 LIDPVLETAPRDAQLIKELGLRLLYAVNTHCH-ADHITGSGLLRSLLPGCQSVISRLSGA 108 +I P+ +T P ++G R +N+H D + L+ ++LPG +++ Sbjct: 1 MIRPIADTYPLLPLSKAQMGQR-QEIINSHKRLWDKTMATDLIMTILPGMTV---KVTNP 56 Query: 109 QADLHIEDGDSIRFGRFALETRASPGHTPGCVTFVLND 146 + G R + G+ VTF ++ Sbjct: 57 NDTYYQFQGIVQRITDGKVAVLFEGGNWDKLVTFQASE 94 >5L2Q-C nrPDB Length = 320 Score = 29.8 bits (65), Expect = 1.3, Method: Composition-based stats. Identities = 33/191 (17%), Positives = 63/191 (32%), Gaps = 30/191 (15%) Query: 41 GDRESREAVLIDPVLETAPRDAQLIKELGLRLLYAVNT-----HC----HADHITGSGLL 91 D + A LI+ + ++ +L + + + Y V H H D G+ +L Sbjct: 128 HDFSDKTADLIN-LQHYVIKEKRLSERETVVIFYDVVRVVEALHQKNIVHRDLKLGNMVL 186 Query: 92 RSLLPGCQSVISRLSGAQADLHIEDGDSIRFGRFALETRASPGHTPGCVT----FVLNDH 147 L + +GD ++ + R SP + V + Sbjct: 187 NKRTHRITITNFCLGK----HLVSEGDLLK------DQRGSPAYISPDVLSGRPYRGKPS 236 Query: 148 SMAFTGDALLIRGCGRTDFQQGCAKTLYHSVHEKIFTLPGDCLIYPAHDYHGFTVSTVEE 207 M G L G+ F + L+ + +T+P D + TV + + Sbjct: 237 DMWALGVVLFTMLYGQFPFYDSIPQELFRKIKAAEYTIPEDGRV------SENTVCLIRK 290 Query: 208 ERTLNPRLTLS 218 L+P+ L+ Sbjct: 291 LLVLDPQQRLA 301 >3ZQ4-A nrPDB Length = 555 Score = 29.8 bits (65), Expect = 1.3, Method: Composition-based stats. Identities = 19/104 (18%), Positives = 36/104 (34%), Gaps = 13/104 (12%) Query: 34 CTFTYLLGDRESREAVLIDPVL----------ETAPRDAQLIKELGLRLLYAVNTHCHAD 83 TY + ++ E VLID + + D + + ++ TH H D Sbjct: 21 GKNTYAVQFQD--EIVLIDAGIKFPEDELLGIDYVIPDYTYLVKNEDKIKGLFITHGHED 78 Query: 84 HITGSGLLRSLLPGCQSVISRLSGAQADLHIEDGDSIRFGRFAL 127 HI G L + +L+ +E+ +R + + Sbjct: 79 HIGGIPYLLRQVN-IPVYGGKLAIGLLRNKLEEHGLLRQTKLNI 121 >3TX2-A nrPDB Length = 251 Score = 29.4 bits (64), Expect = 1.6, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 22/60 (36%), Gaps = 2/60 (3%) Query: 192 YPAHDYHGFTVSTVEEERTLNPRLTLSCEEFVKIMGNLNLPK--PQQIDFAVPANMRCGV 249 PA D H + +L P E ++ + PK PQ+I +PA R Sbjct: 142 CPAFDVHLLGMGGEGHINSLFPHTDAVKETQRLVVAVPDSPKPPPQRITLTLPAIQRSRE 201 >5OJG-A nrPDB Length = 260 Score = 29.0 bits (63), Expect = 2.0, Method: Composition-based stats. Identities = 21/91 (23%), Positives = 38/91 (41%), Gaps = 5/91 (5%) Query: 70 LRLLYAVNTHCHADHITGSGLLRSLLPGCQSVISRLSGAQADLHIEDGDSIRFGRFALET 129 + L A+ D+I +G+ ++ S + G A+ + D I GR + Sbjct: 169 VGLTRALAMGLAKDNIRVNGIAPGVIKTKMSQVLWDGGEDAEKELTDIQEIALGRLGV-- 226 Query: 130 RASPGHTPGCVTFVLNDHSMAFTGDALLIRG 160 P G V ++ +D S TG+ ++I G Sbjct: 227 ---PDDCAGTVAYLASDDSSYITGEMIIIAG 254 >5ZDO-A nrPDB Length = 548 Score = 28.6 bits (62), Expect = 2.7, Method: Composition-based stats. Identities = 18/77 (23%), Positives = 28/77 (36%), Gaps = 11/77 (14%) Query: 174 LYHSVHEKIFTLPGDCLIYPAHDYH----------GFTVSTVEEERTLNPRLTLSCEEFV 223 LY VH + + +IYP +D+ ++ T+E E E Sbjct: 183 LYRIVHAPHYHVGDRWVIYPMYDFAHPLEDFIEGVTHSLCTLEFENNRTVYD-WVIENLK 241 Query: 224 KIMGNLNLPKPQQIDFA 240 G P+P Q +FA Sbjct: 242 GKCGLPTSPRPHQYEFA 258 >5X0Y-O nrPDB Length = 735 Score = 28.2 bits (61), Expect = 3.8, Method: Composition-based stats. Identities = 16/58 (27%), Positives = 26/58 (44%), Gaps = 7/58 (12%) Query: 29 FEPVSCTFTYLLGDRESREAVLIDPVL--ETAPRDAQLIKELGLRLLYAVNTHCHADH 84 F+ V TF Y++ +E L+ V + +K +L +NTH HAD+ Sbjct: 201 FDVVLTTFEYII-----KERALLSKVKWVHMIIDEGHRMKNAQSKLSLTLNTHYHADY 253 >2CG3-A nrPDB Length = 658 Score = 27.8 bits (60), Expect = 4.1, Method: Composition-based stats. Identities = 13/54 (24%), Positives = 21/54 (38%), Gaps = 1/54 (1%) Query: 35 TFTYLLGDRESREAVLIDPVLETAPRDAQLIKELGLR-LLYAVNTHCHADHITG 87 T++ GD + + +ELG R + + +H HADH G Sbjct: 124 NITFIRGDSGWIVVDTLTTPATARAAYELVSRELGERPIRTVIYSHAHADHFGG 177 >2MOU-A nrPDB Length = 220 Score = 27.8 bits (60), Expect = 5.1, Method: Composition-based stats. Identities = 11/63 (17%), Positives = 24/63 (38%), Gaps = 8/63 (12%) Query: 182 IFTLPGDCLIYPAHDYHGFTVSTVEEERTLNPRLTLSCEEFVKIMGNLNLPKPQQIDF-A 240 + + D I T++ +++PR + + GN+N+ + +DF Sbjct: 84 VHRIDSDTFIC-------HTITQSFAVGSISPRDFIDLVYIKRYEGNMNIISSKSVDFPE 136 Query: 241 VPA 243 P Sbjct: 137 YPP 139 >4PDX-A nrPDB Length = 640 Score = 27.4 bits (59), Expect = 5.4, Method: Composition-based stats. Identities = 10/38 (26%), Positives = 14/38 (36%) Query: 50 LIDPVLETAPRDAQLIKELGLRLLYAVNTHCHADHITG 87 L+ P A D ++ + TH H DH G Sbjct: 122 LVTPPAAKAALDLYFQHRPQKPIVAVIYTHSHTDHYGG 159 >3N05-A nrPDB Length = 590 Score = 27.4 bits (59), Expect = 6.1, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 1/58 (1%) Query: 92 RSLLPGCQSVISRLSGAQADLHIEDGDSIRFGRFALETRASPGHTPGCVTFVLNDHSM 149 R+ GC + + G Q +L + DGDSI R +P + GCV L+ + Sbjct: 207 RAQEAGCTTAYLAMIGGQDEL-VFDGDSIVVDRDGEVVARAPQFSEGCVVLDLDLPAA 263 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.311 0.124 0.327 Lambda K H 0.267 0.0378 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 8,817,935 Number of Sequences: 36641 Number of extensions: 306108 Number of successful extensions: 2682 Number of sequences better than 10.0: 54 Number of HSP's better than 10.0 without gapping: 32 Number of HSP's successfully gapped in prelim test: 49 Number of HSP's that attempted gapping in prelim test: 2595 Number of HSP's gapped (non-prelim): 88 length of query: 254 length of database: 10,336,785 effective HSP length: 95 effective length of query: 159 effective length of database: 6,855,890 effective search space: 1090086510 effective search space used: 1090086510 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.4 bits) S2: 58 (27.1 bits)