BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= O95497 (513 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 4CYF-A nrPDB 1031 0.0 3KI8-A nrPDB 63 2e-10 1F89-A nrPDB 45 8e-05 2W1V-A nrPDB 44 2e-04 5G3P-A nrPDB 41 0.001 1EMS-A nrPDB 41 0.002 4HG5-A nrPDB 38 0.011 5NYB-A nrPDB 37 0.018 3WUY-A nrPDB 34 0.13 2DYU-A nrPDB 34 0.14 6GCS-H nrPDB 31 1.3 4ZIU-A nrPDB 29 5.3 >4CYF-A nrPDB Length = 506 Score = 1031 bits (2666), Expect = 0.0, Method: Compositional matrix adjust. Identities = 491/492 (99%), Positives = 491/492 (99%) Query: 22 QDTFTAAVYEHAAILPNATLTPVSREEALALMNRNLDILEGAITSAADQGAHIIVTPEDA 81 QDTF AAVYEHAAILPNATLTPVSREEALALMNRNLDILEGAITSAADQGAHIIVTPEDA Sbjct: 15 QDTFIAAVYEHAAILPNATLTPVSREEALALMNRNLDILEGAITSAADQGAHIIVTPEDA 74 Query: 82 IYGWNFNRDSLYPYLEDIPDPEVNWIPCNNRNRFGQTPVQERLSCLAKNNSIYVVANIGD 141 IYGWNFNRDSLYPYLEDIPDPEVNWIPCNNRNRFGQTPVQERLSCLAKNNSIYVVANIGD Sbjct: 75 IYGWNFNRDSLYPYLEDIPDPEVNWIPCNNRNRFGQTPVQERLSCLAKNNSIYVVANIGD 134 Query: 142 KKPCDTSDPQCPPDGRYQYNTDVVFDSQGKLVARYHKQNLFMGENQFNVPKEPEIVTFNT 201 KKPCDTSDPQCPPDGRYQYNTDVVFDSQGKLVARYHKQNLFMGENQFNVPKEPEIVTFNT Sbjct: 135 KKPCDTSDPQCPPDGRYQYNTDVVFDSQGKLVARYHKQNLFMGENQFNVPKEPEIVTFNT 194 Query: 202 TFGSFGIFTCFDILFHDPAVTLVKDFHVDTIVFPTAWMNVLPHLSAVEFHSAWAMGMRVN 261 TFGSFGIFTCFDILFHDPAVTLVKDFHVDTIVFPTAWMNVLPHLSAVEFHSAWAMGMRVN Sbjct: 195 TFGSFGIFTCFDILFHDPAVTLVKDFHVDTIVFPTAWMNVLPHLSAVEFHSAWAMGMRVN 254 Query: 262 FLASNIHYPSKKMTGSGIYAPNSSRAFHYDMKTEEGKLLLSQLDSHPSHSAVVNWTSYAS 321 FLASNIHYPSKKMTGSGIYAPNSSRAFHYDMKTEEGKLLLSQLDSHPSHSAVVNWTSYAS Sbjct: 255 FLASNIHYPSKKMTGSGIYAPNSSRAFHYDMKTEEGKLLLSQLDSHPSHSAVVNWTSYAS 314 Query: 322 SIEALSSGNKEFKGTVFFDEFTFVKLTGVAGNYTVCQKDLCCHLSYKMSENIPNEVYALG 381 SIEALSSGNKEFKGTVFFDEFTFVKLTGVAGNYTVCQKDLCCHLSYKMSENIPNEVYALG Sbjct: 315 SIEALSSGNKEFKGTVFFDEFTFVKLTGVAGNYTVCQKDLCCHLSYKMSENIPNEVYALG 374 Query: 382 AFDGLHTVEGRYYLQICTLLKCKTTNLNTCGDSAETASTRFEMFSLSGTFGTQYVFPEVL 441 AFDGLHTVEGRYYLQICTLLKCKTTNLNTCGDSAETASTRFEMFSLSGTFGTQYVFPEVL Sbjct: 375 AFDGLHTVEGRYYLQICTLLKCKTTNLNTCGDSAETASTRFEMFSLSGTFGTQYVFPEVL 434 Query: 442 LSENQLAPGEFQVSTDGRLFSLKPTSGPVLTVTLFGRLYEKDWASNASSGLTAQARIIML 501 LSENQLAPGEFQVSTDGRLFSLKPTSGPVLTVTLFGRLYEKDWASNASSGLTAQARIIML Sbjct: 435 LSENQLAPGEFQVSTDGRLFSLKPTSGPVLTVTLFGRLYEKDWASNASSGLTAQARIIML 494 Query: 502 IVIAPIVCSLSW 513 IVIAPIVCSLSW Sbjct: 495 IVIAPIVCSLSW 506 >3KI8-A nrPDB Length = 262 Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 47/171 (27%), Positives = 73/171 (42%), Gaps = 30/171 (17%) Query: 54 NRNLDILEGAITSAADQGAHIIVTPEDAIYGWNFN-RDSLYPYLEDIPDPEVNWIPCNNR 112 ++N E I A+ QGA ++V PE G+NF R+ ++ + IP+ E Sbjct: 17 DKNYSKAEKLIKEASKQGAQLVVLPELFDTGYNFETREEVFEIAQKIPEGETTTF----- 71 Query: 113 NRFGQTPVQERLSCLAKNNSIYVVANIGDKKPCDTSDPQCPPDGRYQYNTDVVFDSQGKL 172 L +A++ +Y+VA +K DG YN+ VV +G Sbjct: 72 -----------LMDVARDTGVYIVAGTAEK------------DGDVLYNSAVVVGPRG-F 107 Query: 173 VARYHKQNLFMGENQFNVPKEPEIVTFNTTFGSFGIFTCFDILFHDPAVTL 223 + +Y K +LF E F P + F+ F G+ CFD F + A TL Sbjct: 108 IGKYRKIHLFYREKFFFEPGDLGFRVFDLGFMKVGVMICFDWFFPESARTL 158 >1F89-A nrPDB Length = 291 Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 27/101 (26%), Positives = 51/101 (50%), Gaps = 11/101 (10%) Query: 150 PQCPPDGRYQYNTDVVFDSQGKLVARYHKQNLF---------MGENQFNVPKEPEIVTFN 200 P+ P YNT ++F+ GKL+ ++ K +LF E++ P E + T + Sbjct: 100 PELDPKTDKIYNTSIIFNEDGKLIDKHRKVHLFDVDIPNGISFHESETLSPGE-KSTTID 158 Query: 201 TTFGSFGIFTCFDILFHDPAVTLVKDFHVDTIVFPTAWMNV 241 T +G FG+ C+D+ F + A+ + +++P+A+ V Sbjct: 159 TKYGKFGVGICYDMRFPELAMLSARKGAF-AMIYPSAFNTV 198 >2W1V-A nrPDB Length = 276 Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 50/185 (27%), Positives = 80/185 (43%), Gaps = 43/185 (23%) Query: 64 ITSAADQGAHIIVTPE--DAIYGWNFNRDSLYPYLEDIPDPEVNWIPCNNRNRFGQTPVQ 121 + AA QGA+I+ PE ++ YG + D Y E IP G++ Sbjct: 28 VREAAKQGANIVSLPECFNSPYGTTYFPD----YAEKIP---------------GES--T 66 Query: 122 ERLSCLAKNNSIYVVANIGDKKPCDTSDPQCPPDGRYQYNTDVVFDSQGKLVARYHKQNL 181 ++LS +AK +SIY++ S P+ D YNT VF G L+ ++ K +L Sbjct: 67 QKLSEVAKESSIYLIGG---------SIPE--EDAGKLYNTCSVFGPDGSLLVKHRKIHL 115 Query: 182 F----MGENQFNVPKE----PEIVTFNTTFGSFGIFTCFDILFHDPAVTLVKDFHVDTIV 233 F G+ F K TF+T + G+ C+D+ F + A + +V Sbjct: 116 FDIDVPGKITFQESKTLSPGDSFSTFDTPYCKVGLGICYDMRFAELA-QIYAQRGCQLLV 174 Query: 234 FPTAW 238 +P A+ Sbjct: 175 YPGAF 179 >5G3P-A nrPDB Length = 346 Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust. Identities = 53/225 (23%), Positives = 86/225 (38%), Gaps = 46/225 (20%) Query: 43 PVSREEALALMNRNLDILEGAI--TSAADQGAHIIVTPEDAIYGWNFNRDSLYPYLEDIP 100 PV E+ A +++ + + I T + G +IV PE + G N + + +L +P Sbjct: 22 PVPVVESRADIDKQIQQIIKTIHSTKSGYPGLELIVFPEYSTQGLNTKKWTTEEFLCTVP 81 Query: 101 DPEVNWIPCNNRNRFGQTPVQERLSCLAKNNSIYVVANIGDKKPCDTSDPQCPPDGRYQY 160 PE + + K + +Y V +I +K P DG Y Sbjct: 82 GPETD-----------------LFAEACKESKVYGVFSIMEKNP----------DGGEPY 114 Query: 161 NTDVVFDSQGKLVARYHKQNLFMGENQFNVPKEPEIVTFNTTFGSFGIFTCFDILFHDPA 220 NT V+ D QG+++ +Y K N + VP EP G G+ C A Sbjct: 115 NTAVIIDPQGEMILKYRKLNPW-------VPVEP------WKAGDLGLPVCDGPGGSKLA 161 Query: 221 VTLVKDFHVDTIVFPTAW--MNVLPHLS--AVEFHSAWAMGMRVN 261 V + D + A+ NVL +S + + W + R N Sbjct: 162 VCICHDGMFPEVAREAAYKGANVLIRISGYSTQVSEQWMLTNRSN 206 >1EMS-A nrPDB Length = 440 Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust. Identities = 32/128 (25%), Positives = 60/128 (46%), Gaps = 22/128 (17%) Query: 122 ERLSCLAKNNSIYV-VANIGDKKPCDTSDPQCPPDGRYQYNTDVVFDSQGKLVARYHKQN 180 E+ LA+ ++I++ + + K P D + P +NT ++ DS G A Y+K + Sbjct: 79 EKYRELARKHNIWLSLGGLHHKDPSDAAHP---------WNTHLIIDSDGVTRAEYNKLH 129 Query: 181 LF---------MGENQFNVPKEPEIVTFNTTFGSFGIFTCFDILFHDPAVTL-VKDFHVD 230 LF + E++F+ I +T G G+ C+D+ F P ++L + Sbjct: 130 LFDLEIPGKVRLMESEFSKAGTEMIPPVDTPIGRLGLSICYDVRF--PELSLWNRKRGAQ 187 Query: 231 TIVFPTAW 238 + FP+A+ Sbjct: 188 LLSFPSAF 195 >4HG5-A nrPDB Length = 341 Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust. Identities = 43/204 (21%), Positives = 89/204 (43%), Gaps = 41/204 (20%) Query: 51 ALMNRNLDILEGAITSAADQGAHIIVTPEDAIYGWNFNRDSLYPYLEDIPDPEVNWIPCN 110 A + +NL +++ I+ A + A ++ PE + Y ++ P + Sbjct: 51 ADLTKNLKVVKELISEAIQKKADVVFLPEASDY--------------------LSQNPLH 90 Query: 111 NRNRFGQTP-----VQERLSCLAKNNSIYVVANIGDKKPCDTSDPQCPPDGRYQYNTDVV 165 +R ++P +Q ++ L ++NS + +IG P D + R + N + Sbjct: 91 SRYLAQKSPKFIRQLQSSITDLVRDNSRNIDVSIGVHLPPSEQD-LLEGNDRVR-NVLLY 148 Query: 166 FDSQGKLVARYHKQNLF---------MGENQFNVPKE--PEIVTFNTTFGSFGIFTCFDI 214 D +GK++ Y K +LF + E++ P + P+I+ + G G C+DI Sbjct: 149 IDHEGKILQEYQKLHLFDVDVPNGPILKESKSVQPGKAIPDII--ESPLGKLGSAICYDI 206 Query: 215 LFHDPAVTLVKDFHVDTIVFPTAW 238 F + ++ L + + + FP+A+ Sbjct: 207 RFPEFSLKL-RSMGAEILCFPSAF 229 >5NYB-A nrPDB Length = 283 Score = 37.0 bits (84), Expect = 0.018, Method: Compositional matrix adjust. Identities = 39/186 (20%), Positives = 77/186 (41%), Gaps = 37/186 (19%) Query: 56 NLDILEGAITSAADQGAHIIVTPEDAIYGWNFNRDSLYPYLEDIPDPEVNWIPCNNRNRF 115 NLD+++ A A++QGA +++TPE ++G+ + + C + Sbjct: 38 NLDLIDDAAARASEQGAQLLLTPE--LFGFGYVPSQI----------------CAQVSAE 79 Query: 116 GQTPVQERLSCLAKNNSIYVVANIGDKKPCDTSDPQCPPDGRYQYN-TDVVFDSQGKLVA 174 + RL +A++ I +V ++ P+G Q T + D G+++A Sbjct: 80 QVDAARSRLRGIARDRGIALVWSLPG------------PEGPEQRGITAELADEHGEVLA 127 Query: 175 RYHKQNLFMGENQFN-VPKE--PEIVTFNTTFGSFGIFTCFDILFHDPAVTLVKDFHVDT 231 Y K L+ E + VP E P ++++ + +D+ F + V Sbjct: 128 SYQKVQLYGPEEKAAFVPGEQPPPVLSWGGR--QLSLLVAYDVEFPE-MVRAAAARGAQL 184 Query: 232 IVFPTA 237 ++ PTA Sbjct: 185 VLVPTA 190 >3WUY-A nrPDB Length = 349 Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust. Identities = 37/170 (21%), Positives = 66/170 (38%), Gaps = 38/170 (22%) Query: 53 MNRNLDILEGAITSAADQGAHIIVTPEDAIYGWNFNRDSLYPYLEDIPDPEV---NWIPC 109 M + LD AI +AA +G +IV PE + YPY + P + + + Sbjct: 34 MEKVLD----AIANAAKKGVELIVFPETFV--------PYYPYFSFVEPPVLMGKSHLKL 81 Query: 110 NNRNRFGQTPVQERLSCLAKNNSIYVVANIGDKKPCDTSDPQCPPDGRYQYNTDVVFDSQ 169 V + ++ AK + + VV + +++ YNT ++FD+ Sbjct: 82 YQEAVTVPGKVTQAIAQAAKTHGMVVVLGVNEREEGSL------------YNTQLIFDAD 129 Query: 170 GKLVARYHK------QNLFMGENQFNVPKEPEIVTFNTTFGSFGIFTCFD 213 G LV + K + + G+ + T +TT G G C++ Sbjct: 130 GALVLKRRKITPTYHERMVWGQGD-----GAGLRTVDTTVGRLGALACWE 174 >2DYU-A nrPDB Length = 334 Score = 34.3 bits (77), Expect = 0.14, Method: Compositional matrix adjust. Identities = 27/114 (23%), Positives = 45/114 (39%), Gaps = 26/114 (22%) Query: 65 TSAADQGAHIIVTPEDAIYGWNFNRDSLYPYLEDIPDPEVNWIPCNNRNRFGQTPVQERL 124 T A G +I+ PE + G N + +L D+P E E Sbjct: 46 TKAGYPGVELIIFPEYSTQGLNTAKWLSEEFLLDVPGKET-----------------ELY 88 Query: 125 SCLAKNNSIYVVANIGDKKPCDTSDPQCPPDGRYQYNTDVVFDSQGKLVARYHK 178 + K +Y V +I ++ P +P YNT ++ D QG+++ +Y K Sbjct: 89 AKACKEAKVYGVFSIMERNPDSNKNP---------YNTAIIIDPQGEIILKYRK 133 >6GCS-H nrPDB Length = 243 Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust. Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 2/39 (5%) Query: 368 KMSENIPNEVYALGAFDGLH--TVEGRYYLQICTLLKCK 404 K+ E P VY + F ++ T GRY+LQICT C+ Sbjct: 95 KLLEMPPMRVYEVATFYTMYNRTPMGRYHLQICTTTPCQ 133 >4ZIU-A nrPDB Length = 639 Score = 28.9 bits (63), Expect = 5.3, Method: Compositional matrix adjust. Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 1/62 (1%) Query: 241 VLPHLSAVEFHSAWAMGMRVNFLASNIHYPSKKMTGSGIYAPNSSRAFHYDMKTEEGKLL 300 LP + + H W +G+R F A ++Y + G +A + ++ T EG+LL Sbjct: 92 ALPGETVADQHKQWKIGVRPAFPAQTVNYGTALQPGE-TWAIPADGLQNFSPVTLEGQLL 150 Query: 301 LS 302 LS Sbjct: 151 LS 152 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 4CYF-A nrPDB 917 0.0 5G3P-A nrPDB 211 6e-55 3KI8-A nrPDB 173 3e-43 2W1V-A nrPDB 156 3e-38 1EMS-A nrPDB 136 3e-32 1F89-A nrPDB 127 1e-29 Sequences not found previously or not previously below threshold: 2DYU-A nrPDB 166 2e-41 4HG5-A nrPDB 82 5e-16 5H8L-A nrPDB 81 8e-16 4KZF-A nrPDB 81 9e-16 2UXY-A nrPDB 80 3e-15 2GGL-A nrPDB 71 1e-12 5NYB-A nrPDB 70 2e-12 2VHI-A nrPDB 70 3e-12 3WUY-A nrPDB 69 4e-12 6FTQ-A nrPDB 68 9e-12 5K62-A nrPDB 54 2e-07 3N05-A nrPDB 46 3e-05 2E11-A nrPDB 37 0.020 6GCS-H nrPDB 32 0.49 3OPY-A nrPDB 31 1.4 6B4O-A nrPDB 30 2.8 3IAM-2 nrPDB 30 3.5 >4CYF-A nrPDB Length = 506 Score = 917 bits (2369), Expect = 0.0, Method: Composition-based stats. Identities = 491/492 (99%), Positives = 491/492 (99%) Query: 22 QDTFTAAVYEHAAILPNATLTPVSREEALALMNRNLDILEGAITSAADQGAHIIVTPEDA 81 QDTF AAVYEHAAILPNATLTPVSREEALALMNRNLDILEGAITSAADQGAHIIVTPEDA Sbjct: 15 QDTFIAAVYEHAAILPNATLTPVSREEALALMNRNLDILEGAITSAADQGAHIIVTPEDA 74 Query: 82 IYGWNFNRDSLYPYLEDIPDPEVNWIPCNNRNRFGQTPVQERLSCLAKNNSIYVVANIGD 141 IYGWNFNRDSLYPYLEDIPDPEVNWIPCNNRNRFGQTPVQERLSCLAKNNSIYVVANIGD Sbjct: 75 IYGWNFNRDSLYPYLEDIPDPEVNWIPCNNRNRFGQTPVQERLSCLAKNNSIYVVANIGD 134 Query: 142 KKPCDTSDPQCPPDGRYQYNTDVVFDSQGKLVARYHKQNLFMGENQFNVPKEPEIVTFNT 201 KKPCDTSDPQCPPDGRYQYNTDVVFDSQGKLVARYHKQNLFMGENQFNVPKEPEIVTFNT Sbjct: 135 KKPCDTSDPQCPPDGRYQYNTDVVFDSQGKLVARYHKQNLFMGENQFNVPKEPEIVTFNT 194 Query: 202 TFGSFGIFTCFDILFHDPAVTLVKDFHVDTIVFPTAWMNVLPHLSAVEFHSAWAMGMRVN 261 TFGSFGIFTCFDILFHDPAVTLVKDFHVDTIVFPTAWMNVLPHLSAVEFHSAWAMGMRVN Sbjct: 195 TFGSFGIFTCFDILFHDPAVTLVKDFHVDTIVFPTAWMNVLPHLSAVEFHSAWAMGMRVN 254 Query: 262 FLASNIHYPSKKMTGSGIYAPNSSRAFHYDMKTEEGKLLLSQLDSHPSHSAVVNWTSYAS 321 FLASNIHYPSKKMTGSGIYAPNSSRAFHYDMKTEEGKLLLSQLDSHPSHSAVVNWTSYAS Sbjct: 255 FLASNIHYPSKKMTGSGIYAPNSSRAFHYDMKTEEGKLLLSQLDSHPSHSAVVNWTSYAS 314 Query: 322 SIEALSSGNKEFKGTVFFDEFTFVKLTGVAGNYTVCQKDLCCHLSYKMSENIPNEVYALG 381 SIEALSSGNKEFKGTVFFDEFTFVKLTGVAGNYTVCQKDLCCHLSYKMSENIPNEVYALG Sbjct: 315 SIEALSSGNKEFKGTVFFDEFTFVKLTGVAGNYTVCQKDLCCHLSYKMSENIPNEVYALG 374 Query: 382 AFDGLHTVEGRYYLQICTLLKCKTTNLNTCGDSAETASTRFEMFSLSGTFGTQYVFPEVL 441 AFDGLHTVEGRYYLQICTLLKCKTTNLNTCGDSAETASTRFEMFSLSGTFGTQYVFPEVL Sbjct: 375 AFDGLHTVEGRYYLQICTLLKCKTTNLNTCGDSAETASTRFEMFSLSGTFGTQYVFPEVL 434 Query: 442 LSENQLAPGEFQVSTDGRLFSLKPTSGPVLTVTLFGRLYEKDWASNASSGLTAQARIIML 501 LSENQLAPGEFQVSTDGRLFSLKPTSGPVLTVTLFGRLYEKDWASNASSGLTAQARIIML Sbjct: 435 LSENQLAPGEFQVSTDGRLFSLKPTSGPVLTVTLFGRLYEKDWASNASSGLTAQARIIML 494 Query: 502 IVIAPIVCSLSW 513 IVIAPIVCSLSW Sbjct: 495 IVIAPIVCSLSW 506 >5G3P-A nrPDB Length = 346 Score = 211 bits (537), Expect = 6e-55, Method: Composition-based stats. Identities = 53/225 (23%), Positives = 86/225 (38%), Gaps = 46/225 (20%) Query: 43 PVSREEALALMNRNLDILEGAI--TSAADQGAHIIVTPEDAIYGWNFNRDSLYPYLEDIP 100 PV E+ A +++ + + I T + G +IV PE + G N + + +L +P Sbjct: 22 PVPVVESRADIDKQIQQIIKTIHSTKSGYPGLELIVFPEYSTQGLNTKKWTTEEFLCTVP 81 Query: 101 DPEVNWIPCNNRNRFGQTPVQERLSCLAKNNSIYVVANIGDKKPCDTSDPQCPPDGRYQY 160 PE + + K + +Y V +I +K P DG Y Sbjct: 82 GPETD-----------------LFAEACKESKVYGVFSIMEKNP----------DGGEPY 114 Query: 161 NTDVVFDSQGKLVARYHKQNLFMGENQFNVPKEPEIVTFNTTFGSFGIFTCFDILFHDPA 220 NT V+ D QG+++ +Y K N + VP EP G G+ C A Sbjct: 115 NTAVIIDPQGEMILKYRKLNPW-------VPVEP------WKAGDLGLPVCDGPGGSKLA 161 Query: 221 VTLVKDFHVDTIVFPTAW--MNVLPHLS--AVEFHSAWAMGMRVN 261 V + D + A+ NVL +S + + W + R N Sbjct: 162 VCICHDGMFPEVAREAAYKGANVLIRISGYSTQVSEQWMLTNRSN 206 >3KI8-A nrPDB Length = 262 Score = 173 bits (437), Expect = 3e-43, Method: Composition-based stats. Identities = 52/192 (27%), Positives = 80/192 (41%), Gaps = 33/192 (17%) Query: 54 NRNLDILEGAITSAADQGAHIIVTPEDAIYGWNFN-RDSLYPYLEDIPDPEVNWIPCNNR 112 ++N E I A+ QGA ++V PE G+NF R+ ++ + IP+ E Sbjct: 17 DKNYSKAEKLIKEASKQGAQLVVLPELFDTGYNFETREEVFEIAQKIPEGETTTF----- 71 Query: 113 NRFGQTPVQERLSCLAKNNSIYVVANIGDKKPCDTSDPQCPPDGRYQYNTDVVFDSQGKL 172 L +A++ +Y+VA +K DG YN+ VV +G Sbjct: 72 -----------LMDVARDTGVYIVAGTAEK------------DGDVLYNSAVVVGPRG-F 107 Query: 173 VARYHKQNLFMGENQFNVPKEPEIVTFNTTFGSFGIFTCFDILFHDPAVTLVKDFHVDTI 232 + +Y K +LF E F P + F+ F G+ CFD F + A TL D I Sbjct: 108 IGKYRKIHLFYREKFFFEPGDLGFRVFDLGFMKVGVMICFDWFFPESARTLALKGA-DVI 166 Query: 233 VFPTAWMNVLPH 244 P V+P+ Sbjct: 167 AHPA--NLVMPY 176 >2DYU-A nrPDB Length = 334 Score = 166 bits (420), Expect = 2e-41, Method: Composition-based stats. Identities = 46/225 (20%), Positives = 82/225 (36%), Gaps = 45/225 (20%) Query: 43 PVSREEALALMNRNLDILEGAI--TSAADQGAHIIVTPEDAIYGWNFNRDSLYPYLEDIP 100 PV + ++ N++ + + T A G +I+ PE + G N + +L D+P Sbjct: 22 PVPIVNSRKDIDHNIESIIRTLHATKAGYPGVELIIFPEYSTQGLNTAKWLSEEFLLDVP 81 Query: 101 DPEVNWIPCNNRNRFGQTPVQERLSCLAKNNSIYVVANIGDKKPCDTSDPQCPPDGRYQY 160 E E + K +Y V +I ++ P +P Y Sbjct: 82 GKET-----------------ELYAKACKEAKVYGVFSIMERNPDSNKNP---------Y 115 Query: 161 NTDVVFDSQGKLVARYHKQNLFMGENQFNVPKEPEIVTFNTTFGSFGIFTCFDILFHDPA 220 NT ++ D QG+++ +Y K + P EP G G+ C A Sbjct: 116 NTAIIIDPQGEIILKYRKLFPW-------NPIEPWYP------GDLGMPVCEGPGGSKLA 162 Query: 221 VTLVKDFHVDTIVFPTAWM--NVLPHLS--AVEFHSAWAMGMRVN 261 V + D + + A+ NV +S + + + W + R N Sbjct: 163 VCICHDGMIPELAREAAYKGCNVYIRISGYSTQVNDQWILTNRSN 207 >2W1V-A nrPDB Length = 276 Score = 156 bits (393), Expect = 3e-38, Method: Composition-based stats. Identities = 51/194 (26%), Positives = 79/194 (40%), Gaps = 43/194 (22%) Query: 56 NLDILEGAITSAADQGAHIIVTPE--DAIYGWNFNRDSLYPYLEDIPDPEVNWIPCNNRN 113 NL + AA QGA+I+ PE ++ YG + D Y E IP Sbjct: 20 NLTRACSLVREAAKQGANIVSLPECFNSPYGTTYFPD----YAEKIPGEST--------- 66 Query: 114 RFGQTPVQERLSCLAKNNSIYVVANIGDKKPCDTSDPQCPPDGRYQYNTDVVFDSQGKLV 173 ++LS +AK +SIY++ S P+ D YNT VF G L+ Sbjct: 67 --------QKLSEVAKESSIYLIGG---------SIPE--EDAGKLYNTCSVFGPDGSLL 107 Query: 174 ARYHKQNLF----MGENQFNVPKE----PEIVTFNTTFGSFGIFTCFDILFHDPAVTLVK 225 ++ K +LF G+ F K TF+T + G+ C+D+ F + A + Sbjct: 108 VKHRKIHLFDIDVPGKITFQESKTLSPGDSFSTFDTPYCKVGLGICYDMRFAELA-QIYA 166 Query: 226 DFHVDTIVFPTAWM 239 +V+P A+ Sbjct: 167 QRGCQLLVYPGAFN 180 >1EMS-A nrPDB Length = 440 Score = 136 bits (342), Expect = 3e-32, Method: Composition-based stats. Identities = 39/198 (19%), Positives = 76/198 (38%), Gaps = 40/198 (20%) Query: 52 LMNRNLDILEGAITSAADQGAHIIVTPEDAIY-GWNFNRDSLYPYLEDIPDPEVNWIPCN 110 + +N + I A ++ ++ PE + G N N D Sbjct: 27 DLEKNFQAAKNMIERAGEKKCEMVFLPECFDFIGLNKNEQIDLAMATD------------ 74 Query: 111 NRNRFGQTPVQERLSCLAKNNSIYV-VANIGDKKPCDTSDPQCPPDGRYQYNTDVVFDSQ 169 E+ LA+ ++I++ + + K P D + P +NT ++ DS Sbjct: 75 -------CEYMEKYRELARKHNIWLSLGGLHHKDPSDAAHP---------WNTHLIIDSD 118 Query: 170 GKLVARYHKQNLF---------MGENQFNVPKEPEIVTFNTTFGSFGIFTCFDILFHDPA 220 G A Y+K +LF + E++F+ I +T G G+ C+D+ F + + Sbjct: 119 GVTRAEYNKLHLFDLEIPGKVRLMESEFSKAGTEMIPPVDTPIGRLGLSICYDVRFPELS 178 Query: 221 VTLVKDFHVDTIVFPTAW 238 + + + FP+A+ Sbjct: 179 L-WNRKRGAQLLSFPSAF 195 >1F89-A nrPDB Length = 291 Score = 127 bits (319), Expect = 1e-29, Method: Composition-based stats. Identities = 46/205 (22%), Positives = 83/205 (40%), Gaps = 41/205 (20%) Query: 48 EALALMNRNLDILEGAITSAADQGAHIIVTPE--DAIYGWNFNRDSLYPYLEDIPDPEVN 105 + +A + R +E A+ ++V PE ++ Y + R Y E I Sbjct: 24 DKMANLQRAATFIERAMKE--QPDTKLVVLPECFNSPYSTDQFR----KYSEVI------ 71 Query: 106 WIPCNNRNRFGQTPVQERLSCLAKNNSIYVVANIGDKKPCDTSDPQCPPDGRYQYNTDVV 165 N + + LS LA I +V P+ P YNT ++ Sbjct: 72 -------NPKEPSTSVQFLSNLANKFKIILVGGT---------IPELDPKTDKIYNTSII 115 Query: 166 FDSQGKLVARYHKQNLF---------MGENQFNVPKEPEIVTFNTTFGSFGIFTCFDILF 216 F+ GKL+ ++ K +LF E++ P E + T +T +G FG+ C+D+ F Sbjct: 116 FNEDGKLIDKHRKVHLFDVDIPNGISFHESETLSPGE-KSTTIDTKYGKFGVGICYDMRF 174 Query: 217 HDPAVTLVKDFHVDTIVFPTAWMNV 241 + A+ + +++P+A+ V Sbjct: 175 PELAMLSARKGAF-AMIYPSAFNTV 198 >4HG5-A nrPDB Length = 341 Score = 82.1 bits (201), Expect = 5e-16, Method: Composition-based stats. Identities = 39/199 (19%), Positives = 79/199 (39%), Gaps = 27/199 (13%) Query: 49 ALALMNRNLDILEGAITSAADQGAHIIVTPEDAIYGWNFNRDSLYPYLEDIPDPEVNWIP 108 + A + +NL +++ I+ A + A ++ PE + Y + N + P Sbjct: 49 SSADLTKNLKVVKELISEAIQKKADVVFLPEASDY-LSQNPLHSRYLAQKSPK------- 100 Query: 109 CNNRNRFGQTPVQERLSCLAKNNSIYVVANIGDKKPCDTSDPQCPPDGRYQYNTDVVFDS 168 +Q ++ L ++NS + +IG P S+ N + D Sbjct: 101 -------FIRQLQSSITDLVRDNSRNIDVSIGVHLP--PSEQDLLEGNDRVRNVLLYIDH 151 Query: 169 QGKLVARYHKQNLF---------MGENQFNVPKEPEIVTFNTTFGSFGIFTCFDILFHDP 219 +GK++ Y K +LF + E++ P + + G G C+DI F + Sbjct: 152 EGKILQEYQKLHLFDVDVPNGPILKESKSVQPGKAIPDIIESPLGKLGSAICYDIRFPEF 211 Query: 220 AVTLVKDFHVDTIVFPTAW 238 ++ L + + + FP+A+ Sbjct: 212 SLKL-RSMGAEILCFPSAF 229 >5H8L-A nrPDB Length = 304 Score = 81.3 bits (199), Expect = 8e-16, Method: Composition-based stats. Identities = 37/212 (17%), Positives = 75/212 (35%), Gaps = 32/212 (15%) Query: 52 LMNRNLDILEGAITSAADQGAHIIVTPEDAIYGWNFNRDSLYPYLEDIPDPEVNWIPCNN 111 ++ N+ E + +A QGA+I++ E G+ F + +++ Sbjct: 24 DVSTNVTTAERLVRAAHKQGANIVLIQELF-EGYYFCQAQREDFIQR------------- 69 Query: 112 RNRFGQTPVQERLSCLAKNNSIYVVANIGDKKPCDTSDPQCPPDGRYQYNTDVVFDSQGK 171 + P RL LAK + + + + YN+ + D+ G Sbjct: 70 AKPYKDHPTIMRLQKLAKELGVVIPVSFFE------------EANNAHYNSIAIIDADGT 117 Query: 172 LVARYHKQN----LFMGENQFNVPKEPEIVTFNTTFGSFGIFTCFDILFHDPAVTLVKDF 227 + Y K + E + P + F T + G+ +D F + A + Sbjct: 118 DLGIYRKSHIPDGPGYEEKFYFNPGDTGFKVFQTKYAKIGVAISWDQWFPEAARAMALQG 177 Query: 228 HVDTIVFPTAWMNVLPHLSAVEFHSAWAMGMR 259 + + +PTA + PH +++ W M+ Sbjct: 178 A-EILFYPTAIGSE-PHDQSIDSRDHWKRVMQ 207 >4KZF-A nrPDB Length = 348 Score = 81.3 bits (199), Expect = 9e-16, Method: Composition-based stats. Identities = 41/241 (17%), Positives = 78/241 (32%), Gaps = 37/241 (15%) Query: 44 VSREEALALMNRNLDILEGAIT--SAADQGAHIIVTPEDAIYGWNFNRDSLYPYLEDIPD 101 + R A + N + + G ++V PE + G +++D ++ IP Sbjct: 22 MPRLHTKAEVIENAKKIADMVVGMKQGLPGMDLVVFPEYSTMGIMYDQDEMFATAASIPG 81 Query: 102 PEVNWIPCNNRNRFGQTPVQERLSCLAKNNSIYVVANIGDKKPCDTSDPQCPPDGRYQYN 161 E + K + V ++ +K D P P YN Sbjct: 82 EET-----------------AIFAEACKKADTWGVFSLTGEKHED--HPNKAP-----YN 117 Query: 162 TDVVFDSQGKLVARYHKQNLFMGENQFNVPKEPEIVTFNTTFGSFGIFTCFDILFHDPAV 221 T V+ +++G++V +Y K + + P + VT + C D + + Sbjct: 118 TLVLINNKGEIVQKYRKIIPWCPILGWY-PGDTTYVTEGPKGLKISLIVCDDGNYPEIWR 176 Query: 222 TLVKDFHVDTIVFPTAWMNVLPHLSAVEFHSAWAMGMRVNFLASNIHYPSKKMTG-SGIY 280 + IV +M M + A+N + TG G+Y Sbjct: 177 D-CAMKGAELIVRCQGYM--------YPAKEQQIMMAKAMAWANNTYVAVANATGFDGVY 227 Query: 281 A 281 + Sbjct: 228 S 228 >2UXY-A nrPDB Length = 341 Score = 79.8 bits (195), Expect = 3e-15, Method: Composition-based stats. Identities = 32/198 (16%), Positives = 62/198 (31%), Gaps = 28/198 (14%) Query: 44 VSREEALALMNRNLDILEGAIT--SAADQGAHIIVTPEDAIYGWNFNRDSLYPYLEDIPD 101 + R A + N + I G ++V PE ++ G ++ + IP Sbjct: 22 MPRLHTAAEVLDNARKIAEMIVGMKQGLPGMDLVVFPEYSLQGIMYDPAEMMETAVAIPG 81 Query: 102 PEVNWIPCNNRNRFGQTPVQERLSCLAKNNSIYVVANIGDKKPCDTSDPQCPPDGRYQYN 161 E E S + +++ V ++ + P YN Sbjct: 82 EET-----------------EIFSRACRKANVWGVFSL-----TGERHEEHPRKA--PYN 117 Query: 162 TDVVFDSQGKLVARYHKQNLFMGENQFNVPKEPEIVTFNTTFGSFGIFTCFDILFHDPAV 221 T V+ D+ G++V +Y K + + P V+ + C D + + Sbjct: 118 TLVLIDNNGEIVQKYRKIIPWC-PIEGWYPGGQTYVSEGPKGMKISLIICDDGNYPEIWR 176 Query: 222 TLVKDFHVDTIVFPTAWM 239 + IV +M Sbjct: 177 D-CAMKGAELIVRCQGYM 193 >2GGL-A nrPDB Length = 304 Score = 70.9 bits (172), Expect = 1e-12, Method: Composition-based stats. Identities = 38/200 (19%), Positives = 72/200 (36%), Gaps = 38/200 (19%) Query: 43 PVSREEALALMNRNLDILEGAITSAADQGAHIIVTPEDAIYGWNFNRDSLYPYLEDIPDP 102 P++R E + + L +T+AA +G + IV PE A+ + F R + Sbjct: 14 PIARAETREQV---VGRLLDMLTNAASRGVNFIVFPELALTTF-FPRWHFTD------EA 63 Query: 103 EVNWIPCNNRNRFGQTPVQERLSCLAKNNSIYVVANIGDKKPCDTSDPQCPPDGRYQ--Y 160 E++ P+ E + L IG + + +G + + Sbjct: 64 ELDSFYETEMPGPVVRPLFETAAEL----------GIG----FNLGYAELVVEGGVKRRF 109 Query: 161 NTDVVFDSQGKLVARYHKQNL-----------FMG-ENQFNVPKEPEIVTFNTTFGSFGI 208 NT ++ D GK+V +Y K +L F E ++ P + ++ G+ Sbjct: 110 NTSILVDKSGKIVGKYRKIHLPGHKEYEAYRPFQHLEKRYFEPGDLGFPVYDVDAAKMGM 169 Query: 209 FTCFDILFHDPAVTLVKDFH 228 F C D + + + Sbjct: 170 FICNDRRWPETWRVMGLKGA 189 >5NYB-A nrPDB Length = 283 Score = 70.2 bits (170), Expect = 2e-12, Method: Composition-based stats. Identities = 37/189 (19%), Positives = 68/189 (35%), Gaps = 31/189 (16%) Query: 52 LMNRNLDILEGAITSAADQGAHIIVTPEDAIYGWNFNRDSLYPYLEDIPDPEVNWIPCNN 111 NLD+++ A A++QGA +++TPE +G+ V C Sbjct: 34 DPQHNLDLIDDAAARASEQGAQLLLTPELFGFGY------------------VPSQICAQ 75 Query: 112 RNRFGQTPVQERLSCLAKNNSIYVVANIGDKKPCDTSDPQCPPDGRYQYNTDVVFDSQGK 171 + + RL +A++ I +V ++ P+ P T + D G+ Sbjct: 76 VSAEQVDAARSRLRGIARDRGIALVWSL--------PGPEGPEQRGI---TAELADEHGE 124 Query: 172 LVARYHKQNLF-MGENQFNVPKEPEIVTFNTTFGSFGIFTCFDILFHDPAVTLVKDFHVD 230 ++A Y K L+ E VP E + + +D+ F + Sbjct: 125 VLASYQKVQLYGPEEKAAFVPGEQPPPVLSWGGRQLSLLVAYDVEFPEMVRAAAA-RGAQ 183 Query: 231 TIVFPTAWM 239 ++ PTA Sbjct: 184 LVLVPTALA 192 >2VHI-A nrPDB Length = 405 Score = 69.8 bits (169), Expect = 3e-12, Method: Composition-based stats. Identities = 52/305 (17%), Positives = 113/305 (37%), Gaps = 69/305 (22%) Query: 31 EHAAILPNATLTPVSREEALALMNRNLDILEGAITSAADQGAHIIVTPEDAIYGWNFNRD 90 +++ ++P T E+ + + ++ I +AA+ G +I+ T E + F Sbjct: 79 QNSIVIP----TTAPIEKQREAI---WNKVKTMIKAAAEAGCNIVCTQEAWTMPFAFCTR 131 Query: 91 SLYPYLEDIPDPEVNWIPCNNRNRFGQTPVQERLSCLAKNNSIYVVANIGDKKPCDTSDP 150 +P+ E + E P + L+ LAK ++ ++ +I ++ Sbjct: 132 EKFPWCEFAEEAE-------------NGPTTKMLAELAKAYNMVIIHSILERD------- 171 Query: 151 QCPPDGRYQYNTDVVFDSQGKLVARYHKQNL----FMGENQFNVPKEPEIVTFNTTFGSF 206 G +NT VV + G+ + ++ K ++ E+ + + F T FG Sbjct: 172 --MEHGETIWNTAVVISNSGRYLGKHRKNHIPRVGDFNESTYYMEGNTGHPVFETEFGKL 229 Query: 207 GIFTCFDILFHDPAVTLVKDFHVDTIVFPTAWMNVLPHLSAVEFHSAWAMGMRVNFLASN 266 + C+ H + + + P+A + LS W++ R +A++ Sbjct: 230 AVNICYG-RHHPQNWMMFGLNGAEIVFNPSA---TIGRLS----EPLWSIEARNAAIANS 281 Query: 267 I-----------HYPSKKMTGSG---------------IYAPNSSRAFHYDMKTEEGKLL 300 +P++ +G G + AP+ SR + ++ LL Sbjct: 282 YFTVPINRVGTEQFPNEYTSGDGNKAHKEFGPFYGSSYVAAPDGSRT--PSLSRDKDGLL 339 Query: 301 LSQLD 305 + +LD Sbjct: 340 VVELD 344 >3WUY-A nrPDB Length = 349 Score = 69.4 bits (168), Expect = 4e-12, Method: Composition-based stats. Identities = 32/158 (20%), Positives = 61/158 (38%), Gaps = 18/158 (11%) Query: 57 LDILEGAITSAADQGAHIIVTPEDAIYGWNFNRDSLYPYLEDIPDPEVNWIPCNNRNRFG 116 ++ + AI +AA +G +IV PE + + + P L + + Sbjct: 34 MEKVLDAIANAAKKGVELIVFPETFVPYYPYFSFVEPPVLM-----GKSHLKLYQEAVTV 88 Query: 117 QTPVQERLSCLAKNNSIYVVANIGDKKPCDTSDPQCPPDGRYQYNTDVVFDSQGKLVARY 176 V + ++ AK + + VV + +++ YNT ++FD+ G LV + Sbjct: 89 PGKVTQAIAQAAKTHGMVVVLGVNEREE------------GSLYNTQLIFDADGALVLKR 136 Query: 177 HKQNLFMGENQFNVPKE-PEIVTFNTTFGSFGIFTCFD 213 K E + + T +TT G G C++ Sbjct: 137 RKITPTYHERMVWGQGDGAGLRTVDTTVGRLGALACWE 174 >6FTQ-A nrPDB Length = 390 Score = 68.2 bits (165), Expect = 9e-12, Method: Composition-based stats. Identities = 59/306 (19%), Positives = 108/306 (35%), Gaps = 67/306 (21%) Query: 32 HAAILPNATLTPV--SREEALALMNRNLDILEGAITSAADQGAHIIVTPEDAIYGWNFNR 89 H ++ N P E ++ ++R + + + AA G +II E + F Sbjct: 79 HVGLVQNRIPLPANAPVAEQVSALHRRIKAI---VEVAAMCGVNIICFQEAWTMPFAFCT 135 Query: 90 DSLYPYLEDIPDPEVNWIPCNNRNRFGQTPVQERLSCLAKNNSIYVVANIGDKKPCDTSD 149 P+ E E P LAKN+ + VV+ I ++ Sbjct: 136 REKLPWTEFAESAE-------------DGPTTRFCQKLAKNHDMVVVSPILERD------ 176 Query: 150 PQCPPDGRYQYNTDVVFDSQGKLVARYHKQNLF----MGENQFNVPKEPEIVTFNTTFGS 205 G +NT VV + G ++ + K ++ E+ + + F T FG Sbjct: 177 ---SEHGDVLWNTAVVISNSGAVLGKTRKNHIPRVGDFNESTYYMEGNLGHPVFQTQFGR 233 Query: 206 FGIFTCFDILFHDPAVTLVKDFHVDTIVFPTAWMNVLPHLSAVEFHSAWAMGMRVNFLAS 265 + C+ H + + I P+A + L S W + R +A+ Sbjct: 234 IAVNICYG-RHHPLNWLMYSINGAEIIFNPSATIGALS-------ESLWPIEARNAAIAN 285 Query: 266 NI-----------HYPSKKMTGSG---------------IYAPNSSRAFHYDMKTEEGKL 299 + H+P++ +G G + AP+SSR ++ +G L Sbjct: 286 HCFTCAINRVGTEHFPNEFCSGDGKKAHQDFGYFYGSSYVAAPDSSRTPGLS-RSRDG-L 343 Query: 300 LLSQLD 305 L+++LD Sbjct: 344 LVAKLD 349 >5K62-A nrPDB Length = 459 Score = 53.6 bits (127), Expect = 2e-07, Method: Composition-based stats. Identities = 51/256 (19%), Positives = 86/256 (33%), Gaps = 55/256 (21%) Query: 53 MNRNLDILEGAITSAADQGAHIIVTPEDAIYGWNFN-RDSLYPYLEDIPDPEVNWIPCNN 111 + R IL+ SA II+ PE A+ G++F+ R + PY+ Sbjct: 39 IKRTWSILDKVTKSATYVKPDIILFPEFALTGYSFHARKDILPYVTK------------- 85 Query: 112 RNRFGQTPVQERLSCLAKNNSIYVVANIGDKKPCDTSDPQCPPDGRYQYNTDVVFDSQGK 171 + P E +++ Y + ++ D + YN+ +V + QG Sbjct: 86 ---KDEGPSFELAKSISEKFQCYTIIGYPEED-----------DEQKLYNSALVVNPQGG 131 Query: 172 LVARYHKQNLFMGENQFNVPKEPE-IVTFNTTFGSFG-----------------IFTCFD 213 + Y K L+ E ++ + PE TF F I D Sbjct: 132 QIFNYRKTFLYDTEMNWDCEENPEGFQTFPMDFSKCAKLSNEDSYNRDVTLKASIGISMD 191 Query: 214 --------ILFHDPAVTLVKDFHVDTIVFPTAWMNVLPHLSAVEFHSAWAMGMRVNFLAS 265 H + D +V+ I+ P AW+N H+ + N +A Sbjct: 192 LSPYKFMAPFNHFEFSSFCVDNNVELILCPMAWLNSTSITDKQTLHNNSLLEAAKNKIAF 251 Query: 266 NIHYPSKKMTGS-GIY 280 + + GS GIY Sbjct: 252 ALKEQGLPLAGSQGIY 267 >3N05-A nrPDB Length = 590 Score = 46.3 bits (108), Expect = 3e-05, Method: Composition-based stats. Identities = 27/173 (15%), Positives = 62/173 (35%), Gaps = 22/173 (12%) Query: 46 REEALALMNRNLDILEGAITSAADQGAHIIVTPEDAIYGWNFNRDSLYPYLEDIPDPEVN 105 + + + N + + +A+QGAH++ PE A+ G+ P + Sbjct: 12 IDSTVGDIAGNAEAILRWTRHSAEQGAHLVAFPEMALTGY----------------PVED 55 Query: 106 WIPCNNRNRFGQTPVQERLSCLAKNNSIYVVANIGDKKPCDTSDPQCPPDGRYQYNTDVV 165 ++ +T ++E + LA+ + +G +++ P+ N V Sbjct: 56 LALRSSFVEASRTALRELAARLAEEGFGELPVLVGYLDRSESAQPKYGQPAGAPRNAAAV 115 Query: 166 FDSQGKLVARYHKQNL----FMGENQFNVPKEPEIVTFNTTFGSFGIFTCFDI 214 +G++ + K +L E ++ VP + + C D+ Sbjct: 116 LH-RGRVALTFAKHHLPNYGVFDEFRYFVPGDTM-PIVRLHGVDIALAICEDL 166 >2E11-A nrPDB Length = 266 Score = 37.0 bits (84), Expect = 0.020, Method: Composition-based stats. Identities = 40/221 (18%), Positives = 64/221 (28%), Gaps = 46/221 (20%) Query: 62 GAITSAADQGAHIIVTPEDAIYGWNFNRDSLYPYLEDIPDPEVNWIPCNNRNRFGQTPVQ 121 GA+ + +++ PE G++ + ED+ P V WI Sbjct: 26 GALLEPLAGQSDLVILPETFTSGFS---NEAIDKAEDMDGPTVAWIRTQAARLGAAITGS 82 Query: 122 ERLSCLAKNNSIYVVANIGDKKPCDTSDPQCPPDGRYQYNTDVVFDSQGKLVARYHKQNL 181 +L + ++ PDG QY Y K++L Sbjct: 83 VQLR---TEHGVF------------NRLLWATPDGALQY---------------YDKRHL 112 Query: 182 F-MGENQFNVPKEPEIVTFNTTFGSFGIFTCFDILFH-------DPAVTLVKDFHVDTIV 233 F G E + C+D+ F D DF + V Sbjct: 113 FRFGNEHLRYAAGRERLCVEWKGWRINPQVCYDLRFPVFCRNRFDVERPGQLDFDLQLFV 172 Query: 234 --FPTAWM---NVLPHLSAVEFHSAWAMGMRVNFLASNIHY 269 +P+A L A+E A RV + +HY Sbjct: 173 ANWPSARAYAWKTLLRARAIENLCFVAAVNRVGVDGNQLHY 213 >6GCS-H nrPDB Length = 243 Score = 32.4 bits (72), Expect = 0.49, Method: Composition-based stats. Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 9/70 (12%) Query: 368 KMSENIPNEVYALGAFDGLH--TVEGRYYLQICTLLKCKTTNLNTCGDSAETA------- 418 K+ E P VY + F ++ T GRY+LQICT C+ + ++ + Sbjct: 95 KLLEMPPMRVYEVATFYTMYNRTPMGRYHLQICTTTPCQLCGSDGIMEAVQNTLNIKPGE 154 Query: 419 STRFEMFSLS 428 +T+ +F+LS Sbjct: 155 TTKDNLFTLS 164 >3OPY-A nrPDB Length = 989 Score = 30.9 bits (68), Expect = 1.4, Method: Composition-based stats. Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 5/64 (7%) Query: 332 EFKGTVF---FDEFT-FVKLTGVAGNYTVCQKDLCCHLSYKMSENIPNEVYALGAFDGLH 387 +F G + F+ FT +L Y + +CC L +S N+P Y+LG+ L+ Sbjct: 688 KFDGLIIIGGFEAFTALYELDAARAQYPIFNIPMCC-LPATVSNNVPGTEYSLGSDTCLN 746 Query: 388 TVEG 391 T+ G Sbjct: 747 TLSG 750 >6B4O-A nrPDB Length = 452 Score = 29.7 bits (65), Expect = 2.8, Method: Composition-based stats. Identities = 25/127 (19%), Positives = 41/127 (32%), Gaps = 2/127 (1%) Query: 15 YVSRASCQDTFTAAVYEHAAILPNATLTPVSREEALALMNRNLDILEGAITSAADQGAHI 74 YV Q+T +Y ++ LTPV+ L R + + Sbjct: 286 YVKVDKFQNTTQNGIYAVGDVIGKIDLTPVAIAAGRRLSERLFNGQTDLYLDYNLVPTVV 345 Query: 75 IVTPEDAIYGWNFNRDSLYPYLED-IPDPEVNWIPCNNRNRFGQTPVQERLSCLAKNNSI 133 P A G + +L Y ED + ++ P + +L C+ K I Sbjct: 346 FTHPPVATIGLT-EKAALEEYGEDQVKIYRSSFTPMYFALGEYRQKCDMKLICVGKEEKI 404 Query: 134 YVVANIG 140 + IG Sbjct: 405 VGLHGIG 411 >3IAM-2 nrPDB Length = 181 Score = 29.7 bits (65), Expect = 3.5, Method: Composition-based stats. Identities = 12/33 (36%), Positives = 18/33 (54%), Gaps = 2/33 (6%) Query: 374 PNEVYALGAFDGLHTV--EGRYYLQICTLLKCK 404 P EV + +F + G+Y+LQ+C L CK Sbjct: 57 PTEVMGVASFYSYYQFVPTGKYHLQVCATLSCK 89 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.313 0.128 0.366 Lambda K H 0.267 0.0394 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 20,307,189 Number of Sequences: 36641 Number of extensions: 846310 Number of successful extensions: 1865 Number of sequences better than 10.0: 25 Number of HSP's better than 10.0 without gapping: 25 Number of HSP's successfully gapped in prelim test: 14 Number of HSP's that attempted gapping in prelim test: 1790 Number of HSP's gapped (non-prelim): 43 length of query: 513 length of database: 10,336,785 effective HSP length: 101 effective length of query: 412 effective length of database: 6,636,044 effective search space: 2734050128 effective search space used: 2734050128 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.5 bits) S2: 61 (28.2 bits)