BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.


Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= O95050
         (263 letters)

Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 
           36,641 sequences; 10,336,785 total letters

Searching..................................................done


Results from round 1


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

2A14-A nrPDB                                                          538   e-153
5YJI-A nrPDB                                                          270   5e-73
5YJF-A nrPDB                                                          268   2e-72
3KQY-A nrPDB                                                          181   3e-46
3DMF-A nrPDB                                                           32   0.24 
1RI1-A nrPDB                                                           32   0.36 
4ILK-A nrPDB                                                           31   0.62 
3QHA-A nrPDB                                                           29   1.9  
3NZW-E nrPDB                                                           29   2.6  
1DMU-A nrPDB                                                           28   3.5  
5OJ2-A nrPDB                                                           28   3.8  
2ASI-A nrPDB                                                           27   7.3  
2VA8-A nrPDB                                                           27   7.5  
1WLJ-A nrPDB                                                           27   8.4  

>2A14-A nrPDB
          Length = 263

 Score =  538 bits (1385), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 261/263 (99%), Positives = 261/263 (99%)

Query: 1   MKGGFTGGDEYQKHFLPRDYLATYYSFDGSPSPEAEMLKFNLECLHKTFGPGGLQGDTLI 60
           MKGGFTGGDEYQKHFLPRDYLATYYSFDGSPSPEAEMLKFNLECLHKTFGPGGLQGDTLI
Sbjct: 1   MKGGFTGGDEYQKHFLPRDYLATYYSFDGSPSPEAEMLKFNLECLHKTFGPGGLQGDTLI 60

Query: 61  DIGSGPTIYQVLAACDSFQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGN 120
           DIGSGPTIYQVLAACDSFQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGN
Sbjct: 61  DIGSGPTIYQVLAACDSFQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGN 120

Query: 121 SGRWEEKEEKLRAAVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAAL 180
           SGRWEEKEEKLRAAVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAAL
Sbjct: 121 SGRWEEKEEKLRAAVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAAL 180

Query: 181 CNLASLLKPGGHLVTTVTLRLPSYMVGKREFSCVALEKEEVEQAVLDAGFDIEQLLHSPQ 240
           CNLASLLKPGGHLVTTVTLRLPSYMVGKREFSCVALEK EVEQAVLDAGFDIEQLLHSPQ
Sbjct: 181 CNLASLLKPGGHLVTTVTLRLPSYMVGKREFSCVALEKGEVEQAVLDAGFDIEQLLHSPQ 240

Query: 241 SYSVTNAANNGVCFIVARKKPGP 263
           SYSVTNAANNGVC IVARKKPGP
Sbjct: 241 SYSVTNAANNGVCCIVARKKPGP 263


>5YJI-A nrPDB
          Length = 284

 Score =  270 bits (690), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 139/262 (53%), Positives = 177/262 (67%), Gaps = 1/262 (0%)

Query: 1   MKGGFTGGDEYQKHFLPRDYLATYYSFDGSPSPEAEMLKFNLECLHKTFGPGGLQGDTLI 60
           M+ GFT  D Y  HF PRDYL  YYSF      E E+L+  L+ L K F  G ++G+ LI
Sbjct: 21  MESGFTSKDTYLSHFNPRDYLEKYYSFGSRHCAENEILRHLLKNLFKIFCLGAVKGELLI 80

Query: 61  DIGSGPTIYQVLAACDSFQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGN 120
           DIGSGPTIYQ+L+AC+SF +I +SD+TD+N  EL+KWLKKEPGA+DW+P V + C+LEGN
Sbjct: 81  DIGSGPTIYQLLSACESFTEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGN 140

Query: 121 SGRWEEKEEKLRAAVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAAL 180
             +  EKEEKLR A+K+VLKCDV    PL    LP ADC+L+ L ++ AC  L AYR AL
Sbjct: 141 RMKGPEKEEKLRRAIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTAL 200

Query: 181 CNLASLLKPGGHLVTTVTLRLPSYMVGKREFSCVALEKEEVEQAVLDAGFDIEQLLHSPQ 240
            NL SLLKPGG LV    L+   YM+G+++FS + L  E V  AV +AG+ IEQ     Q
Sbjct: 201 RNLGSLLKPGGFLVMVDALKSSYYMIGEQKFSSLPLGWETVRDAVEEAGYTIEQFEVISQ 260

Query: 241 SYSVTNAANNGVCFIVARKKPG 262
           +YS T + N G+  +V R KPG
Sbjct: 261 NYSSTTSNNEGLFSLVGR-KPG 281


>5YJF-A nrPDB
          Length = 284

 Score =  268 bits (685), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 138/263 (52%), Positives = 176/263 (66%)

Query: 1   MKGGFTGGDEYQKHFLPRDYLATYYSFDGSPSPEAEMLKFNLECLHKTFGPGGLQGDTLI 60
           M+ GFT  D Y  HF PRDYL  YY F    S E+++LK  L+ L K F   G++GD LI
Sbjct: 21  MESGFTSKDTYLSHFNPRDYLEKYYKFGSRHSAESQILKHLLKNLFKIFCLDGVKGDLLI 80

Query: 61  DIGSGPTIYQVLAACDSFQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGN 120
           DIGSGPTIYQ+L+AC+SF++I ++D++D+N +ELEKWLK  P A+DW+P V + C+LEGN
Sbjct: 81  DIGSGPTIYQLLSACESFKEIVVTDYSDQNLQELEKWLKAAPAAFDWSPVVTYVCDLEGN 140

Query: 121 SGRWEEKEEKLRAAVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAAL 180
             +  EKEEKLR AVK+VLKCDV    PL    LP ADCVL+ L ++ AC  L  Y  AL
Sbjct: 141 RVKGPEKEEKLRQAVKQVLKCDVTQSQPLGAVPLPPADCVLSTLCLDAACPDLPTYCRAL 200

Query: 181 CNLASLLKPGGHLVTTVTLRLPSYMVGKREFSCVALEKEEVEQAVLDAGFDIEQLLHSPQ 240
            NL SLLKPGG LV    L+   YM+G+++FS + L +E VE AV +AG+ IE      Q
Sbjct: 201 RNLGSLLKPGGFLVIMDALKSSYYMIGEQKFSSLPLGREAVEAAVKEAGYTIEWFEVISQ 260

Query: 241 SYSVTNAANNGVCFIVARKKPGP 263
           SYS T A N G+  +VARK   P
Sbjct: 261 SYSSTMANNEGLFSLVARKLSRP 283


>3KQY-A nrPDB
          Length = 289

 Score =  181 bits (459), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 96/234 (41%), Positives = 145/234 (61%), Gaps = 16/234 (6%)

Query: 11  YQKHFLPRDYLATYYSFDGSPSPEAEMLKFN------LECLHKTFGPGGLQGDTLIDIGS 64
           YQ+ F PR YL   Y+      P  ++   N      L CL +TF  G + G TLIDIGS
Sbjct: 27  YQR-FEPRAYLRNNYA-----PPRGDLCNPNGVGPWKLRCLAQTFATGEVSGRTLIDIGS 80

Query: 65  GPTIYQVLAACDSFQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRW 124
           GPT+YQ+L+AC  F+DIT++DF + NR+EL +WL++EPGA++W+   + AC +EG    W
Sbjct: 81  GPTVYQLLSACSHFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECW 140

Query: 125 EEKEEKLRAAVKRVLKCDVHLGNPL---APAVLPLADCVLTLLAMECACCSLDAYRAALC 181
           ++KE +LRA VKRVL  DVH   PL   +PA LP AD +++   +E     L +++ AL 
Sbjct: 141 QDKERQLRARVKRVLPIDVHQPQPLGAGSPAPLP-ADALVSAFCLEAVSPDLASFQRALD 199

Query: 182 NLASLLKPGGHLVTTVTLRLPSYMVGKREFSCVALEKEEVEQAVLDAGFDIEQL 235
           ++ +LL+PGGHL+    L    Y+ G+   + V + +EEV +A++ +G+ +  L
Sbjct: 200 HITTLLRPGGHLLLIGALEESWYLAGEARLTVVPVSEEEVREALVRSGYKVRDL 253


>3DMF-A nrPDB
          Length = 381

 Score = 32.3 bits (72), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 9/58 (15%)

Query: 8   GDEYQKHFLPRDYLATYYSFDGSPSPEAEMLKFNLECLHKTFGPGGLQGDTLIDIGSG 65
           G EY  H LP  + A      G   P + +L   LE L +  GP G++G  ++D+G+G
Sbjct: 195 GAEYTFHHLPGVFSA------GKVDPASLLL---LEALQERLGPEGVRGRQVLDLGAG 243


>1RI1-A nrPDB
          Length = 298

 Score = 31.6 bits (70), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 5/68 (7%)

Query: 158 DCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTTVTLR---LPSYMVGK--REFS 212
           D + +  +   A  + ++   A  N+A  L+PGG+ + TV  R   L  Y  G+   +F 
Sbjct: 135 DVISSQFSFHYAFSTSESLDIAQRNIARHLRPGGYFIMTVPSRDVILERYKQGRMSNDFY 194

Query: 213 CVALEKEE 220
            + LEK E
Sbjct: 195 KIELEKME 202


>4ILK-A nrPDB
          Length = 359

 Score = 30.8 bits (68), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 22/56 (39%), Positives = 32/56 (57%), Gaps = 9/56 (16%)

Query: 55  QGDTLIDIGSGP---TIYQVLAACDSFQDITLSDFTDRNREELEKWLKKEPGAYDW 107
           + DT++  G+GP   TI QVL    + +++ ++D  D   E LEK   KE GA DW
Sbjct: 180 ENDTVLVYGAGPIGLTIVQVLKGVYNVKNVIVADRID---ERLEK--AKESGA-DW 229


>3QHA-A nrPDB
          Length = 296

 Score = 29.3 bits (64), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 21/71 (29%), Positives = 32/71 (45%)

Query: 116 ELEGNSGRWEEKEEKLRAAVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDA 175
           EL    G   E  E+++ A K      +H G P A   + LA  +LT  +   AC ++  
Sbjct: 142 ELATMVGADREVYERIKPAFKHWAAVVIHAGEPGAGTRMKLARNMLTFTSYAAACEAMKL 201

Query: 176 YRAALCNLASL 186
             AA  +L +L
Sbjct: 202 AEAAGLDLQAL 212


>3NZW-E nrPDB
          Length = 234

 Score = 28.9 bits (63), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 7/66 (10%)

Query: 129 EKLRAAVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLK 188
           ++L +  K+++KCD H+G  LA  + P A  +   L  +C   SL      + N    ++
Sbjct: 54  DELSSYQKKIIKCDEHMGLSLA-GLAPDARVLSNYLRQQCNYSSL------VFNRKLAVE 106

Query: 189 PGGHLV 194
             GHL+
Sbjct: 107 RAGHLL 112


>1DMU-A nrPDB
          Length = 299

 Score = 28.1 bits (61), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 17/47 (36%), Positives = 21/47 (44%)

Query: 217 EKEEVEQAVLDAGFDIEQLLHSPQSYSVTNAANNGVCFIVARKKPGP 263
           E   V +  L  G D   LL SP  YS+TN   + +   V  K  GP
Sbjct: 102 EDITVREIGLPTGPDERYLLTSPTIYSLTNGFTDSIMMFVDIKSVGP 148


>5OJ2-A nrPDB
          Length = 910

 Score = 28.1 bits (61), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 8/64 (12%)

Query: 61  DIGSGPTIYQVLAACDSFQ------DITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFA 114
           D+G    ++QV A   S +      + TLS    +N   + +W +KEP A D  P +K+ 
Sbjct: 596 DVGVSACLFQVSAKAYSPEFYYDTPNPTLSQKQSKNYSYILQWTQKEPDAVD--PILKYR 653

Query: 115 CELE 118
            E+ 
Sbjct: 654 LEVR 657


>2ASI-A nrPDB
          Length = 361

 Score = 27.3 bits (59), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 17/53 (32%), Positives = 24/53 (45%)

Query: 27  FDGSPSPEAEMLKFNLECLHKTFGPGGLQGDTLIDIGSGPTIYQVLAACDSFQ 79
           FD S S   +   +NL   + T G  GL  +  I IG      Q+LA  D+ +
Sbjct: 63  FDPSASSTFKATNYNLNITYGTGGANGLYFEDSIAIGDITVTKQILAYVDNVR 115


>2VA8-A nrPDB
          Length = 715

 Score = 27.3 bits (59), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 15/46 (32%), Positives = 21/46 (45%), Gaps = 1/46 (2%)

Query: 65  GPTIYQVLAACDSFQDITLSDFTDRNREELEKWLKKEPGAYDWTPA 110
           GP +  V         + LS  T  N +++ KWL  EP A +W P 
Sbjct: 163 GPVVESVTIRAKRRNLLALSA-TISNYKQIAKWLGAEPVATNWRPV 207


>1WLJ-A nrPDB
          Length = 189

 Score = 26.9 bits (58), Expect = 8.4,   Method: Compositional matrix adjust.
 Identities = 22/87 (25%), Positives = 40/87 (45%), Gaps = 15/87 (17%)

Query: 163 LLAMECACCSLDAYRA---ALCNLASL---------LKPGGHLV---TTVTLRLPSYMVG 207
           ++AM+C    L  +R    A C+L ++         ++P G +    T V+   P +MVG
Sbjct: 7   VVAMDCEMVGLGPHRESGLARCSLVNVHGAVLYDKFIRPEGEITDYRTRVSGVTPQHMVG 66

Query: 208 KREFSCVALEKEEVEQAVLDAGFDIEQ 234
              F+   LE  ++ +  L  G D++ 
Sbjct: 67  ATPFAVARLEILQLLKGKLVVGHDLKH 93


Searching..................................................done


Results from round 2


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value
Sequences used in model and found again:

2A14-A nrPDB                                                          466   e-132
5YJI-A nrPDB                                                          449   e-127
5YJF-A nrPDB                                                          448   e-126
3KQY-A nrPDB                                                          336   6e-93

Sequences not found previously or not previously below threshold:

1L5N-A nrPDB                                                           34   0.080
2VA8-A nrPDB                                                           32   0.19 
1D2C-A nrPDB                                                           32   0.36 
3OFK-A nrPDB                                                           32   0.39 
1H2A-S nrPDB                                                           29   1.6  
4KXR-B nrPDB                                                           28   2.9  
1ZZG-A nrPDB                                                           27   7.7  


CONVERGED!
>2A14-A nrPDB
          Length = 263

 Score =  466 bits (1198), Expect = e-132,   Method: Composition-based stats.
 Identities = 261/263 (99%), Positives = 261/263 (99%)

Query: 1   MKGGFTGGDEYQKHFLPRDYLATYYSFDGSPSPEAEMLKFNLECLHKTFGPGGLQGDTLI 60
           MKGGFTGGDEYQKHFLPRDYLATYYSFDGSPSPEAEMLKFNLECLHKTFGPGGLQGDTLI
Sbjct: 1   MKGGFTGGDEYQKHFLPRDYLATYYSFDGSPSPEAEMLKFNLECLHKTFGPGGLQGDTLI 60

Query: 61  DIGSGPTIYQVLAACDSFQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGN 120
           DIGSGPTIYQVLAACDSFQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGN
Sbjct: 61  DIGSGPTIYQVLAACDSFQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGN 120

Query: 121 SGRWEEKEEKLRAAVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAAL 180
           SGRWEEKEEKLRAAVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAAL
Sbjct: 121 SGRWEEKEEKLRAAVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAAL 180

Query: 181 CNLASLLKPGGHLVTTVTLRLPSYMVGKREFSCVALEKEEVEQAVLDAGFDIEQLLHSPQ 240
           CNLASLLKPGGHLVTTVTLRLPSYMVGKREFSCVALEK EVEQAVLDAGFDIEQLLHSPQ
Sbjct: 181 CNLASLLKPGGHLVTTVTLRLPSYMVGKREFSCVALEKGEVEQAVLDAGFDIEQLLHSPQ 240

Query: 241 SYSVTNAANNGVCFIVARKKPGP 263
           SYSVTNAANNGVC IVARKKPGP
Sbjct: 241 SYSVTNAANNGVCCIVARKKPGP 263


>5YJI-A nrPDB
          Length = 284

 Score =  449 bits (1154), Expect = e-127,   Method: Composition-based stats.
 Identities = 139/262 (53%), Positives = 177/262 (67%), Gaps = 1/262 (0%)

Query: 1   MKGGFTGGDEYQKHFLPRDYLATYYSFDGSPSPEAEMLKFNLECLHKTFGPGGLQGDTLI 60
           M+ GFT  D Y  HF PRDYL  YYSF      E E+L+  L+ L K F  G ++G+ LI
Sbjct: 21  MESGFTSKDTYLSHFNPRDYLEKYYSFGSRHCAENEILRHLLKNLFKIFCLGAVKGELLI 80

Query: 61  DIGSGPTIYQVLAACDSFQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGN 120
           DIGSGPTIYQ+L+AC+SF +I +SD+TD+N  EL+KWLKKEPGA+DW+P V + C+LEGN
Sbjct: 81  DIGSGPTIYQLLSACESFTEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGN 140

Query: 121 SGRWEEKEEKLRAAVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAAL 180
             +  EKEEKLR A+K+VLKCDV    PL    LP ADC+L+ L ++ AC  L AYR AL
Sbjct: 141 RMKGPEKEEKLRRAIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTAL 200

Query: 181 CNLASLLKPGGHLVTTVTLRLPSYMVGKREFSCVALEKEEVEQAVLDAGFDIEQLLHSPQ 240
            NL SLLKPGG LV    L+   YM+G+++FS + L  E V  AV +AG+ IEQ     Q
Sbjct: 201 RNLGSLLKPGGFLVMVDALKSSYYMIGEQKFSSLPLGWETVRDAVEEAGYTIEQFEVISQ 260

Query: 241 SYSVTNAANNGVCFIVARKKPG 262
           +YS T + N G+  +V RK PG
Sbjct: 261 NYSSTTSNNEGLFSLVGRK-PG 281


>5YJF-A nrPDB
          Length = 284

 Score =  448 bits (1152), Expect = e-126,   Method: Composition-based stats.
 Identities = 138/263 (52%), Positives = 176/263 (66%)

Query: 1   MKGGFTGGDEYQKHFLPRDYLATYYSFDGSPSPEAEMLKFNLECLHKTFGPGGLQGDTLI 60
           M+ GFT  D Y  HF PRDYL  YY F    S E+++LK  L+ L K F   G++GD LI
Sbjct: 21  MESGFTSKDTYLSHFNPRDYLEKYYKFGSRHSAESQILKHLLKNLFKIFCLDGVKGDLLI 80

Query: 61  DIGSGPTIYQVLAACDSFQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGN 120
           DIGSGPTIYQ+L+AC+SF++I ++D++D+N +ELEKWLK  P A+DW+P V + C+LEGN
Sbjct: 81  DIGSGPTIYQLLSACESFKEIVVTDYSDQNLQELEKWLKAAPAAFDWSPVVTYVCDLEGN 140

Query: 121 SGRWEEKEEKLRAAVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAAL 180
             +  EKEEKLR AVK+VLKCDV    PL    LP ADCVL+ L ++ AC  L  Y  AL
Sbjct: 141 RVKGPEKEEKLRQAVKQVLKCDVTQSQPLGAVPLPPADCVLSTLCLDAACPDLPTYCRAL 200

Query: 181 CNLASLLKPGGHLVTTVTLRLPSYMVGKREFSCVALEKEEVEQAVLDAGFDIEQLLHSPQ 240
            NL SLLKPGG LV    L+   YM+G+++FS + L +E VE AV +AG+ IE      Q
Sbjct: 201 RNLGSLLKPGGFLVIMDALKSSYYMIGEQKFSSLPLGREAVEAAVKEAGYTIEWFEVISQ 260

Query: 241 SYSVTNAANNGVCFIVARKKPGP 263
           SYS T A N G+  +VARK   P
Sbjct: 261 SYSSTMANNEGLFSLVARKLSRP 283


>3KQY-A nrPDB
          Length = 289

 Score =  336 bits (862), Expect = 6e-93,   Method: Composition-based stats.
 Identities = 102/260 (39%), Positives = 151/260 (58%), Gaps = 18/260 (6%)

Query: 11  YQKHFLPRDYLATYYSFDGSPSPEAEMLKFN------LECLHKTFGPGGLQGDTLIDIGS 64
           YQ+ F PR YL   Y+      P  ++   N      L CL +TF  G + G TLIDIGS
Sbjct: 27  YQR-FEPRAYLRNNYA-----PPRGDLCNPNGVGPWKLRCLAQTFATGEVSGRTLIDIGS 80

Query: 65  GPTIYQVLAACDSFQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRW 124
           GPT+YQ+L+AC  F+DIT++DF + NR+EL +WL++EPGA++W+   + AC +EG    W
Sbjct: 81  GPTVYQLLSACSHFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECW 140

Query: 125 EEKEEKLRAAVKRVLKCDVHLGNPLA---PAVLPLADCVLTLLAMECACCSLDAYRAALC 181
           ++KE +LRA VKRVL  DVH   PL    PA LP AD +++   +E     L +++ AL 
Sbjct: 141 QDKERQLRARVKRVLPIDVHQPQPLGAGSPAPLP-ADALVSAFCLEAVSPDLASFQRALD 199

Query: 182 NLASLLKPGGHLVTTVTLRLPSYMVGKREFSCVALEKEEVEQAVLDAGFDIEQLL--HSP 239
           ++ +LL+PGGHL+    L    Y+ G+   + V + +EEV +A++ +G+ +  L     P
Sbjct: 200 HITTLLRPGGHLLLIGALEESWYLAGEARLTVVPVSEEEVREALVRSGYKVRDLRTYIMP 259

Query: 240 QSYSVTNAANNGVCFIVARK 259
                      GV F  A+K
Sbjct: 260 AHLQTGVDDVKGVFFAWAQK 279


>1L5N-A nrPDB
          Length = 356

 Score = 33.9 bits (76), Expect = 0.080,   Method: Composition-based stats.
 Identities = 25/104 (24%), Positives = 40/104 (38%), Gaps = 8/104 (7%)

Query: 161 LTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTTVTLRLPSYMVGKREFSCVA-LEKE 219
           L  L  +      +A      ++  LLKP G L    TL +   + G    +    + ++
Sbjct: 4   LHALLRDIPAPDAEAMARTQQHIDGLLKPPGSLGRLETLAVQ--LAGMPGLNGTPQVGEK 61

Query: 220 EVEQAVLDAGFDIEQLLHSPQSYSVTNAAN-----NGVCFIVAR 258
            V     D G   E +  SP+  +   AAN      GVC + A+
Sbjct: 62  AVLVMCADHGVWDEGVAVSPKIVTAIQAANMTRGTTGVCVLAAQ 105


>2VA8-A nrPDB
          Length = 715

 Score = 32.3 bits (72), Expect = 0.19,   Method: Composition-based stats.
 Identities = 34/132 (25%), Positives = 52/132 (39%), Gaps = 24/132 (18%)

Query: 3   GGFTGGDEYQKHFLPRDYLATYYSFDG--SPSPE--AEMLKFNLECLHKTFGPGGLQGDT 58
           G +   D + K++     + TY   D      PE   E+  F L+ LH            
Sbjct: 110 GDYDTDDAWLKNYD--IIITTYEKLDSLWRHRPEWLNEVNYFVLDELH-----------Y 156

Query: 59  LIDIGSGPTIYQVLAACDSFQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELE 118
           L D   GP +  V         + LS  T  N +++ KWL  EP A +W P       +E
Sbjct: 157 LNDPERGPVVESVTIRAKRRNLLALSA-TISNYKQIAKWLGAEPVATNWRPVP----LIE 211

Query: 119 GNSGRWEEKEEK 130
           G    + E+++K
Sbjct: 212 G--VIYPERKKK 221


>1D2C-A nrPDB
          Length = 292

 Score = 31.6 bits (70), Expect = 0.36,   Method: Composition-based stats.
 Identities = 14/49 (28%), Positives = 24/49 (48%), Gaps = 7/49 (14%)

Query: 154 LPLADCVLTLLAMECACCSLD-------AYRAALCNLASLLKPGGHLVT 195
           +P  D    ++ +  +   L         +R AL N+AS+++PGG LV 
Sbjct: 124 VPAGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVI 172


>3OFK-A nrPDB
          Length = 216

 Score = 31.6 bits (70), Expect = 0.39,   Method: Composition-based stats.
 Identities = 19/70 (27%), Positives = 30/70 (42%), Gaps = 6/70 (8%)

Query: 172 SLDAYRAALCNLASLLKPGGHLVTTVTLRLPSYMVGKREFSCVALEKEEVEQAVLDAGFD 231
            +   R A+ N+  +L PGGHLV              R +  VA   E V   + +A  +
Sbjct: 129 DMTQMRTAIDNMVKMLAPGGHLVFGSARDATC-----RRWGHVA-GAETVITILTEALTE 182

Query: 232 IEQLLHSPQS 241
           +E++    QS
Sbjct: 183 VERVQCQGQS 192


>1H2A-S nrPDB
          Length = 317

 Score = 29.3 bits (64), Expect = 1.6,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 20/51 (39%)

Query: 213 CVALEKEEVEQAVLDAGFDIEQLLHSPQSYSVTNAANNGVCFIVARKKPGP 263
            + L KE VE+ + + G      L    + +VT          VAR   GP
Sbjct: 4   SIGLGKEGVEERLAERGVSRRDFLKFCTAIAVTMGMGPAFAPEVARALMGP 54


>4KXR-B nrPDB
          Length = 194

 Score = 28.5 bits (62), Expect = 2.9,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 26/51 (50%), Gaps = 2/51 (3%)

Query: 58  TLIDIGSGPTIYQVLAACDSFQDITLSDFTDRNREELEKWLKKEPGAYDWT 108
           +L+D  +GP + Q++ A   F    L+D       E+E+ + +   AY+W 
Sbjct: 51  SLMDAWAGPVVMQLMEAAKPFVR-WLTDLC-VQLSEVERQIHEIVRAYEWA 99


>1ZZG-A nrPDB
          Length = 415

 Score = 27.3 bits (59), Expect = 7.7,   Method: Composition-based stats.
 Identities = 11/37 (29%), Positives = 17/37 (45%)

Query: 196 TVTLRLPSYMVGKREFSCVALEKEEVEQAVLDAGFDI 232
              L   SY+ GK  F  +  E E   +A+ +AG  +
Sbjct: 325 VEGLEAASYLFGKTLFQLLKAEAEATYEALAEAGQRV 361


  Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta
    Posted date:  Jan 3, 2023  9:05 PM
  Number of letters in database: 10,336,785
  Number of sequences in database:  36,641
  
Lambda     K      H
   0.311    0.134    0.378 

Lambda     K      H
   0.267   0.0407    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,624,800
Number of Sequences: 36641
Number of extensions: 422964
Number of successful extensions: 1061
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 1039
Number of HSP's gapped (non-prelim): 29
length of query: 263
length of database: 10,336,785
effective HSP length: 95
effective length of query: 168
effective length of database: 6,855,890
effective search space: 1151789520
effective search space used: 1151789520
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.3 bits)
S2: 58 (27.0 bits)