BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= O75695 (350 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 3BH7-B nrPDB 725 0.0 2YUH-A nrPDB 103 1e-22 5AJ8-A nrPDB 72 4e-13 2BEF-A nrPDB 34 0.095 5HIE-A nrPDB 33 0.16 5HI2-A nrPDB 33 0.27 3PRV-A nrPDB 30 1.2 1NSK-R nrPDB 30 1.7 1WKL-A nrPDB 30 1.7 1F89-A nrPDB 30 1.7 4UOG-A nrPDB 30 2.0 3H1Q-A nrPDB 30 2.0 1W7W-A nrPDB 29 3.5 5U2I-A nrPDB 29 3.7 2VU5-A nrPDB 29 3.8 4B2T-G nrPDB 28 5.2 6E8E-B nrPDB 28 6.3 5X06-A nrPDB 28 6.6 2B0R-A nrPDB 28 7.6 6AY1-A nrPDB 28 8.4 >3BH7-B nrPDB Length = 352 Score = 725 bits (1871), Expect = 0.0, Method: Compositional matrix adjust. Identities = 350/350 (100%), Positives = 350/350 (100%) Query: 1 MGCFFSKRRKADKESRPENEEERPKQYSWDQREKVDPKDYMFSGLKDETVGRLPGTVAGQ 60 MGCFFSKRRKADKESRPENEEERPKQYSWDQREKVDPKDYMFSGLKDETVGRLPGTVAGQ Sbjct: 3 MGCFFSKRRKADKESRPENEEERPKQYSWDQREKVDPKDYMFSGLKDETVGRLPGTVAGQ 62 Query: 61 QFLIQDCENCNIYIFDHSATVTIDDCTNCIIFLGPVKGSVFFRNCRDCKCTLACQQFRVR 120 QFLIQDCENCNIYIFDHSATVTIDDCTNCIIFLGPVKGSVFFRNCRDCKCTLACQQFRVR Sbjct: 63 QFLIQDCENCNIYIFDHSATVTIDDCTNCIIFLGPVKGSVFFRNCRDCKCTLACQQFRVR 122 Query: 121 DCRKLEVFLCCATQPIIESSSNIKFGCFQWYYPELAFQFKDAGLSIFNNTWSNIHDFTPV 180 DCRKLEVFLCCATQPIIESSSNIKFGCFQWYYPELAFQFKDAGLSIFNNTWSNIHDFTPV Sbjct: 123 DCRKLEVFLCCATQPIIESSSNIKFGCFQWYYPELAFQFKDAGLSIFNNTWSNIHDFTPV 182 Query: 181 SGELNWSLLPEDAVVQDYVPIPTTEELKAVRVSTEANRSIVPISRGQRQKSSDESCLVVL 240 SGELNWSLLPEDAVVQDYVPIPTTEELKAVRVSTEANRSIVPISRGQRQKSSDESCLVVL Sbjct: 183 SGELNWSLLPEDAVVQDYVPIPTTEELKAVRVSTEANRSIVPISRGQRQKSSDESCLVVL 242 Query: 241 FAGDYTIANARKLIDEMVGKGFFLVQTKEVSMKAEDAQRVFREKAPDFLPLLNKGPVIAL 300 FAGDYTIANARKLIDEMVGKGFFLVQTKEVSMKAEDAQRVFREKAPDFLPLLNKGPVIAL Sbjct: 243 FAGDYTIANARKLIDEMVGKGFFLVQTKEVSMKAEDAQRVFREKAPDFLPLLNKGPVIAL 302 Query: 301 EFNGDGAVEVCQLIVNEIFNGTKMFVSESKETASGDVDSFYNFADIQMGI 350 EFNGDGAVEVCQLIVNEIFNGTKMFVSESKETASGDVDSFYNFADIQMGI Sbjct: 303 EFNGDGAVEVCQLIVNEIFNGTKMFVSESKETASGDVDSFYNFADIQMGI 352 >2YUH-A nrPDB Length = 179 Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 46/154 (29%), Positives = 84/154 (54%), Gaps = 3/154 (1%) Query: 42 FSGLKDETVGRLPGTVAGQQFLIQDCENCNIYIFDHSATVTIDDCTNCIIFLGPVKGSVF 101 FS L+ + + + + + L+ + NC + ++ + T+ + +C + GPV SVF Sbjct: 13 FSNLESQVLEKRASELHQRDVLLTELSNCTVRLYGNPNTLRLTKAHSCKLLCGPVSTSVF 72 Query: 102 FRNCRDCKCTLACQQFRVRDCRKLEVFLCCATQPIIESSSNIKFGCFQWYYPELAFQFKD 161 +C DC +ACQQ R+ + +FL ++ I+E S I+F + W YPE+ F+ Sbjct: 73 LEDCSDCVLAVACQQLRIHSTKDTRIFLQVTSRAIVEDCSGIQFAPYTWSYPEIDKDFES 132 Query: 162 AGLSIFNNTWSNIHDFTPVSGEL---NWSLLPED 192 +GL N W+++ DF ++ ++ NWS+LPE+ Sbjct: 133 SGLDRSKNNWNDVDDFNWLARDMASPNWSILPEE 166 >5AJ8-A nrPDB Length = 187 Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 31/97 (31%), Positives = 53/97 (54%) Query: 75 FDHSATVTIDDCTNCIIFLGPVKGSVFFRNCRDCKCTLACQQFRVRDCRKLEVFLCCATQ 134 HS V I+ C +C I+ P+ GS F NC +C+ +AC Q R++ C L++++ CA+ Sbjct: 23 ISHSKGVFINGCADCAIYCLPIAGSAFLSNCTNCRVYVACHQLRLKGCTNLDMYVWCAST 82 Query: 135 PIIESSSNIKFGCFQWYYPELAFQFKDAGLSIFNNTW 171 PIIE ++FG ++ + L+ +D + W Sbjct: 83 PIIEECDAMRFGPYRCWVGLLSSCTEDGKTYATHAEW 119 >2BEF-A nrPDB Length = 155 Score = 33.9 bits (76), Expect = 0.095, Method: Compositional matrix adjust. Identities = 25/79 (31%), Positives = 37/79 (46%), Gaps = 15/79 (18%) Query: 250 ARKLIDEMVG----KGFFLVQTKEV--------SMKAEDAQRVFREKAPDFLPLLNKGPV 297 AR L+ E++ KGF LV K++ S AE +R F F+ GPV Sbjct: 21 ARGLVGEIIARYEKKGFVLVGLKQLVPTKDLAESHYAEHKERPFFGGLVSFI---TSGPV 77 Query: 298 IALEFNGDGAVEVCQLIVN 316 +A+ F G G V +L++ Sbjct: 78 VAMVFEGKGVVASARLMIG 96 >5HIE-A nrPDB Length = 302 Score = 33.5 bits (75), Expect = 0.16, Method: Compositional matrix adjust. Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 1/49 (2%) Query: 152 YPELAFQFKDAGLSIFNNTWSNIHDFTPVSGELNWSLLPEDAVVQDYVP 200 + +L + D GL+ + WS H F +SG + W + PE +QD P Sbjct: 161 HEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILW-MAPEVIRMQDKNP 208 >5HI2-A nrPDB Length = 283 Score = 32.7 bits (73), Expect = 0.27, Method: Compositional matrix adjust. Identities = 28/103 (27%), Positives = 39/103 (37%), Gaps = 26/103 (25%) Query: 161 DAGLSIFNNTWSNIHDFTPVSGELNWSLLPEDAVVQDYVPIPTTEELKAVRVSTEANRSI 220 D GL+ + WS H F +SG + W + PE +QD P ++ A + Sbjct: 154 DFGLATVKSRWSGSHQFEQLSGSILW-MAPEVIRMQDSNPYSFQSDVYAFGI-------- 204 Query: 221 VPISRGQRQKSSDESCLVVLFAGD--YTIANARKLIDEMVGKG 261 L L G Y+ N R I EMVG+G Sbjct: 205 ---------------VLYELMTGQLPYSNINNRDQIIEMVGRG 232 >3PRV-A nrPDB Length = 157 Score = 30.4 bits (67), Expect = 1.2, Method: Compositional matrix adjust. Identities = 17/70 (24%), Positives = 35/70 (50%), Gaps = 5/70 (7%) Query: 252 KLIDEMVGKGFFLVQTKEVSMKAEDAQRVFREKAP-----DFLPLLNKGPVIALEFNGDG 306 ++I KG+ LV K + AE AQ+ + + A D + + GP++ + + G G Sbjct: 28 EIIQRFEKKGYKLVALKMLQPSAEQAQQHYIDLASKPFYKDLVAYFSSGPIVGMVWEGKG 87 Query: 307 AVEVCQLIVN 316 V+ ++++ Sbjct: 88 VVKGGRVLLG 97 >1NSK-R nrPDB Length = 152 Score = 30.0 bits (66), Expect = 1.7, Method: Compositional matrix adjust. Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 9/76 (11%) Query: 251 RKLIDEMVG----KGFFLVQTKEVSMKAEDAQRVF-----REKAPDFLPLLNKGPVIALE 301 R L+ E++ KGF LV K + E ++ + R P + +N GPV+A+ Sbjct: 18 RGLVGEIIKRFEQKGFRLVAMKFLRASEEHLKQHYIDLKDRPFFPGLVKYMNSGPVVAMV 77 Query: 302 FNGDGAVEVCQLIVNE 317 + G V+ ++++ E Sbjct: 78 WEGLNVVKTGRVMLGE 93 >1WKL-A nrPDB Length = 137 Score = 30.0 bits (66), Expect = 1.7, Method: Compositional matrix adjust. Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 9/67 (13%) Query: 251 RKLIDEMVG----KGFFLVQTKEVSMKAEDAQRVF---REKA--PDFLPLLNKGPVIALE 301 R L+ E++ KGF + K + + E A+R + REK P + + GPV+A+ Sbjct: 15 RGLVGEILARFERKGFRIAALKLMQISQELAERHYAEHREKPFFPGLVRFITSGPVVAMV 74 Query: 302 FNGDGAV 308 G G V Sbjct: 75 LEGPGVV 81 >1F89-A nrPDB Length = 291 Score = 30.0 bits (66), Expect = 1.7, Method: Compositional matrix adjust. Identities = 27/90 (30%), Positives = 40/90 (44%), Gaps = 12/90 (13%) Query: 144 KFG---CFQWYYPELAFQFKDAGLSIFNNTWSNIHD--FTPVSGELNWSLLPEDAVVQDY 198 KFG C+ +PELA LS ++ I+ F V+G L+W LL V + Sbjct: 163 KFGVGICYDMRFPELAM------LSARKGAFAMIYPSAFNTVTGPLHWHLLARSRAVDNQ 216 Query: 199 VPIPTTEELKAVRVSTEA-NRSIVPISRGQ 227 V + + ++ S A SIV RG+ Sbjct: 217 VYVMLCSPARNLQSSYHAYGHSIVVDPRGK 246 >4UOG-A nrPDB Length = 151 Score = 29.6 bits (65), Expect = 2.0, Method: Compositional matrix adjust. Identities = 19/76 (25%), Positives = 37/76 (48%), Gaps = 9/76 (11%) Query: 251 RKLIDEMV----GKGFFLVQTKEVSMKAEDAQRVFREKA-----PDFLPLLNKGPVIALE 301 R LI E++ KGF L K + + ++ + + A P ++ GPV+A+ Sbjct: 17 RGLIGEIIKRFEAKGFKLAGMKYIQASEDLLKQHYIDLADKPFYPGLCKYMSSGPVVAMC 76 Query: 302 FNGDGAVEVCQLIVNE 317 + G G V+ ++++ E Sbjct: 77 WEGTGVVKTARVMMGE 92 >3H1Q-A nrPDB Length = 272 Score = 29.6 bits (65), Expect = 2.0, Method: Compositional matrix adjust. Identities = 26/86 (30%), Positives = 41/86 (47%), Gaps = 11/86 (12%) Query: 179 PVSGELNWSLLPEDAVVQDYV-PIPTTEELKAV---RVSTEANRSIVPISRGQRQKSSDE 234 PV+G L W+ + +D +V DY+ I ELKA + +E ++ I G ++++ Sbjct: 51 PVAGALKWASVVKDGLVVDYIGAIQIVRELKAKVERLLGSELFQAATAIPPGTVGRNAEA 110 Query: 235 SCLVVLFAG-------DYTIANARKL 253 VV AG D +A AR L Sbjct: 111 CGHVVAGAGLELVTLVDEPVAAARAL 136 >1W7W-A nrPDB Length = 182 Score = 28.9 bits (63), Expect = 3.5, Method: Compositional matrix adjust. Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 9/75 (12%) Query: 251 RKLIDEMVG----KGFFLVQTKEVSMKAEDAQRVFRE--KAPDFLPL---LNKGPVIALE 301 R LI E++ KGF LV K + + AQ+ + + + P F L L+ GPVIA+ Sbjct: 46 RGLISEIISRFERKGFKLVGIKVLIPTKQFAQQHYHDLKERPFFNGLCDFLSSGPVIAMV 105 Query: 302 FNGDGAVEVCQLIVN 316 + G+G + + ++ Sbjct: 106 WEGEGVITYGRKLIG 120 >5U2I-A nrPDB Length = 159 Score = 28.9 bits (63), Expect = 3.7, Method: Compositional matrix adjust. Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 5/62 (8%) Query: 260 KGFFLVQTKEVSMKAEDAQRVFREK--APDF---LPLLNKGPVIALEFNGDGAVEVCQLI 314 KGF LV K ++ A+ A++ + E P F + L GPV A+ + G G V + + Sbjct: 38 KGFKLVALKLITPSADLAKKHYAEHDGKPFFNGLVEFLTSGPVAAMVWEGKGVVAAARKM 97 Query: 315 VN 316 + Sbjct: 98 IG 99 >2VU5-A nrPDB Length = 148 Score = 28.9 bits (63), Expect = 3.8, Method: Compositional matrix adjust. Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 9/71 (12%) Query: 251 RKLIDEMVG----KGFFLVQTKEVSMKAEDAQRVF--REKAPDFLPLLN---KGPVIALE 301 R I E+V KGF LV K + + E A + + E+ P F L++ GPV A+ Sbjct: 15 RAFIGEIVARFEKKGFQLVGAKLMQVTPEIAGQHYAEHEEKPFFGELVDFITSGPVFAMV 74 Query: 302 FNGDGAVEVCQ 312 + G+G V+ + Sbjct: 75 WQGEGVVDTAR 85 >4B2T-G nrPDB Length = 545 Score = 28.5 bits (62), Expect = 5.2, Method: Compositional matrix adjust. Identities = 17/68 (25%), Positives = 33/68 (48%), Gaps = 16/68 (23%) Query: 207 LKAVRVSTEANRSIVPISRGQRQKSSDESCLVVLFAGDY----------------TIANA 250 L+ ++V A +S++ ISR Q ++ D + V++ AG+ I+ Sbjct: 67 LREIQVQHPAAKSMIEISRTQDEEVGDGTTSVIILAGEMLSVAEHFLEQQMHPTVVISAY 126 Query: 251 RKLIDEMV 258 RK +D+M+ Sbjct: 127 RKALDDMI 134 >6E8E-B nrPDB Length = 517 Score = 28.1 bits (61), Expect = 6.3, Method: Compositional matrix adjust. Identities = 31/128 (24%), Positives = 56/128 (43%), Gaps = 23/128 (17%) Query: 245 YTIANARKLIDEMV-----GKGFFLVQTKEVSMKAEDAQRVFREKA-----PDFLPLLNK 294 +++ RK + E++ G VQ +++A +F K PD+ +L K Sbjct: 229 HSVIVPRKGVIELMRMLDGGDNPLRVQIGSNNIRAHVGDFIFTSKLVDGRFPDYRRVLPK 288 Query: 295 GPVIALEFNGD---GAVEVCQLIVNEIFNGTKMFVSES----------KETASGDVDSFY 341 P LE D A ++ NE F G +++VSE+ +E A +D Y Sbjct: 289 NPDKHLEAGCDLLKQAFARAAILSNEKFRGVRLYVSENQLKITANNPEQEEAEEILDVTY 348 Query: 342 NFADIQMG 349 + A++++G Sbjct: 349 SGAEMEIG 356 >5X06-A nrPDB Length = 386 Score = 28.1 bits (61), Expect = 6.6, Method: Compositional matrix adjust. Identities = 31/128 (24%), Positives = 56/128 (43%), Gaps = 23/128 (17%) Query: 245 YTIANARKLIDEMV-----GKGFFLVQTKEVSMKAEDAQRVFREKA-----PDFLPLLNK 294 +++ RK + E++ G VQ +++A +F K PD+ +L K Sbjct: 211 HSVIVPRKGVIELMRMLDGGDNPLRVQIGSNNIRAHVGDFIFTSKLVDGRFPDYRRVLPK 270 Query: 295 GPVIALEFNGD---GAVEVCQLIVNEIFNGTKMFVSES----------KETASGDVDSFY 341 P LE D A ++ NE F G +++VSE+ +E A +D Y Sbjct: 271 NPDKHLEAGCDLLKQAFARAAILSNEKFRGVRLYVSENQLKITANNPEQEEAEEILDVTY 330 Query: 342 NFADIQMG 349 + A++++G Sbjct: 331 SGAEMEIG 338 >2B0R-A nrPDB Length = 202 Score = 27.7 bits (60), Expect = 7.6, Method: Compositional matrix adjust. Identities = 12/46 (26%), Positives = 21/46 (45%) Query: 68 ENCNIYIFDHSATVTIDDCTNCIIFLGPVKGSVFFRNCRDCKCTLA 113 +N I + ++ I++C CI + V S+ NC D K + Sbjct: 81 QNSRIIVEQKVNSIFIENCVGCIFLVNGVISSIEIVNCDDIKLQMT 126 >6AY1-A nrPDB Length = 145 Score = 27.7 bits (60), Expect = 8.4, Method: Compositional matrix adjust. Identities = 16/62 (25%), Positives = 29/62 (46%), Gaps = 5/62 (8%) Query: 252 KLIDEMVGKGFFLVQTKEVSMKAEDAQR---VFREKA--PDFLPLLNKGPVIALEFNGDG 306 K+ID G ++ K + + +DA+ + RE+ D + + GPV+ + G Sbjct: 29 KIIDRFESNGLEVIAMKRLHLSVKDAENFYAIHRERPFFKDLIEFMVSGPVVVMVLEGKD 88 Query: 307 AV 308 AV Sbjct: 89 AV 90 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 3BH7-B nrPDB 682 0.0 2YUH-A nrPDB 245 2e-65 5AJ8-A nrPDB 173 1e-43 Sequences not found previously or not previously below threshold: 2BEF-A nrPDB 34 0.086 5CYA-A nrPDB 31 0.65 1WKL-A nrPDB 31 0.91 6E8E-B nrPDB 30 1.6 5X06-A nrPDB 30 1.6 3PRV-A nrPDB 30 1.6 4B2T-G nrPDB 30 1.8 5HI2-A nrPDB 30 2.0 6AY1-A nrPDB 30 2.1 2VU5-A nrPDB 30 2.2 1NSK-R nrPDB 29 3.3 3PJ9-A nrPDB 29 3.4 1W7W-A nrPDB 29 3.4 5Y88-V nrPDB 28 4.1 4UOG-A nrPDB 28 4.9 5U2I-A nrPDB 28 5.8 2NNL-D nrPDB 28 6.6 CONVERGED! >3BH7-B nrPDB Length = 352 Score = 682 bits (1761), Expect = 0.0, Method: Composition-based stats. Identities = 350/350 (100%), Positives = 350/350 (100%) Query: 1 MGCFFSKRRKADKESRPENEEERPKQYSWDQREKVDPKDYMFSGLKDETVGRLPGTVAGQ 60 MGCFFSKRRKADKESRPENEEERPKQYSWDQREKVDPKDYMFSGLKDETVGRLPGTVAGQ Sbjct: 3 MGCFFSKRRKADKESRPENEEERPKQYSWDQREKVDPKDYMFSGLKDETVGRLPGTVAGQ 62 Query: 61 QFLIQDCENCNIYIFDHSATVTIDDCTNCIIFLGPVKGSVFFRNCRDCKCTLACQQFRVR 120 QFLIQDCENCNIYIFDHSATVTIDDCTNCIIFLGPVKGSVFFRNCRDCKCTLACQQFRVR Sbjct: 63 QFLIQDCENCNIYIFDHSATVTIDDCTNCIIFLGPVKGSVFFRNCRDCKCTLACQQFRVR 122 Query: 121 DCRKLEVFLCCATQPIIESSSNIKFGCFQWYYPELAFQFKDAGLSIFNNTWSNIHDFTPV 180 DCRKLEVFLCCATQPIIESSSNIKFGCFQWYYPELAFQFKDAGLSIFNNTWSNIHDFTPV Sbjct: 123 DCRKLEVFLCCATQPIIESSSNIKFGCFQWYYPELAFQFKDAGLSIFNNTWSNIHDFTPV 182 Query: 181 SGELNWSLLPEDAVVQDYVPIPTTEELKAVRVSTEANRSIVPISRGQRQKSSDESCLVVL 240 SGELNWSLLPEDAVVQDYVPIPTTEELKAVRVSTEANRSIVPISRGQRQKSSDESCLVVL Sbjct: 183 SGELNWSLLPEDAVVQDYVPIPTTEELKAVRVSTEANRSIVPISRGQRQKSSDESCLVVL 242 Query: 241 FAGDYTIANARKLIDEMVGKGFFLVQTKEVSMKAEDAQRVFREKAPDFLPLLNKGPVIAL 300 FAGDYTIANARKLIDEMVGKGFFLVQTKEVSMKAEDAQRVFREKAPDFLPLLNKGPVIAL Sbjct: 243 FAGDYTIANARKLIDEMVGKGFFLVQTKEVSMKAEDAQRVFREKAPDFLPLLNKGPVIAL 302 Query: 301 EFNGDGAVEVCQLIVNEIFNGTKMFVSESKETASGDVDSFYNFADIQMGI 350 EFNGDGAVEVCQLIVNEIFNGTKMFVSESKETASGDVDSFYNFADIQMGI Sbjct: 303 EFNGDGAVEVCQLIVNEIFNGTKMFVSESKETASGDVDSFYNFADIQMGI 352 >2YUH-A nrPDB Length = 179 Score = 245 bits (625), Expect = 2e-65, Method: Composition-based stats. Identities = 46/154 (29%), Positives = 84/154 (54%), Gaps = 3/154 (1%) Query: 42 FSGLKDETVGRLPGTVAGQQFLIQDCENCNIYIFDHSATVTIDDCTNCIIFLGPVKGSVF 101 FS L+ + + + + + L+ + NC + ++ + T+ + +C + GPV SVF Sbjct: 13 FSNLESQVLEKRASELHQRDVLLTELSNCTVRLYGNPNTLRLTKAHSCKLLCGPVSTSVF 72 Query: 102 FRNCRDCKCTLACQQFRVRDCRKLEVFLCCATQPIIESSSNIKFGCFQWYYPELAFQFKD 161 +C DC +ACQQ R+ + +FL ++ I+E S I+F + W YPE+ F+ Sbjct: 73 LEDCSDCVLAVACQQLRIHSTKDTRIFLQVTSRAIVEDCSGIQFAPYTWSYPEIDKDFES 132 Query: 162 AGLSIFNNTWSNIHDFTPVSGEL---NWSLLPED 192 +GL N W+++ DF ++ ++ NWS+LPE+ Sbjct: 133 SGLDRSKNNWNDVDDFNWLARDMASPNWSILPEE 166 >5AJ8-A nrPDB Length = 187 Score = 173 bits (438), Expect = 1e-43, Method: Composition-based stats. Identities = 36/138 (26%), Positives = 63/138 (45%), Gaps = 19/138 (13%) Query: 74 IFDHSATVTIDDCTNCIIFLGPVKGSVFFRNCRDCKCTLACQQFRVRDCRKLEVFLCCAT 133 HS V I+ C +C I+ P+ GS F NC +C+ +AC Q R++ C L++++ CA+ Sbjct: 22 FISHSKGVFINGCADCAIYCLPIAGSAFLSNCTNCRVYVACHQLRLKGCTNLDMYVWCAS 81 Query: 134 QPIIESSSNIKFGCFQWYYPELAFQFKDAGLSIFNNTWSN-----------------IHD 176 PIIE ++FG ++ + L+ +D + W + + D Sbjct: 82 TPIIEECDAMRFGPYRCWVGLLSSCTEDGKTYATHAEWVSRVGEIEDTARTEQNYVKVDD 141 Query: 177 FTPVSGEL--NWSLLPED 192 F V +W +L + Sbjct: 142 FQWVKKRASPHWCVLARE 159 >2BEF-A nrPDB Length = 155 Score = 34.3 bits (77), Expect = 0.086, Method: Composition-based stats. Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 9/75 (12%) Query: 250 ARKLIDEMVG----KGFFLVQTKEVSMKAEDAQRVFRE--KAPDF---LPLLNKGPVIAL 300 AR L+ E++ KGF LV K++ + A+ + E + P F + + GPV+A+ Sbjct: 21 ARGLVGEIIARYEKKGFVLVGLKQLVPTKDLAESHYAEHKERPFFGGLVSFITSGPVVAM 80 Query: 301 EFNGDGAVEVCQLIV 315 F G G V +L++ Sbjct: 81 VFEGKGVVASARLMI 95 >5CYA-A nrPDB Length = 268 Score = 31.2 bits (69), Expect = 0.65, Method: Composition-based stats. Identities = 26/117 (22%), Positives = 41/117 (35%), Gaps = 21/117 (17%) Query: 64 IQDCENCNIYIFDHSATVTIDDCTNCIIFLGPVKGSVF---FRNCRDCKCTLACQQFRVR 120 I C IF + ++ I DCT+ IIFL F R+ ++CK + Sbjct: 146 ITKCVINLQRIFFQTGSIFITDCTDSIIFLRSPSDKDFQIRLRDLKNCKILI-------- 197 Query: 121 DCRKLEVFLCCATQPIIESSSNIKFGCFQ--------WYYPELAFQFKDAGLSIFNN 169 KL + C IIE+ F + P + + +D F + Sbjct: 198 --EKLSPSIDCKQVVIIENCHKCIFNASTRDHLIIQDFSNPFQSEETEDNSAFAFED 252 >1WKL-A nrPDB Length = 137 Score = 30.8 bits (68), Expect = 0.91, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 9/67 (13%) Query: 251 RKLIDEMVG----KGFFLVQTKEVSMKAEDAQRVF---REKA--PDFLPLLNKGPVIALE 301 R L+ E++ KGF + K + + E A+R + REK P + + GPV+A+ Sbjct: 15 RGLVGEILARFERKGFRIAALKLMQISQELAERHYAEHREKPFFPGLVRFITSGPVVAMV 74 Query: 302 FNGDGAV 308 G G V Sbjct: 75 LEGPGVV 81 >6E8E-B nrPDB Length = 517 Score = 30.0 bits (66), Expect = 1.6, Method: Composition-based stats. Identities = 27/103 (26%), Positives = 46/103 (44%), Gaps = 18/103 (17%) Query: 265 VQTKEVSMKAEDAQRVFREKA-----PDFLPLLNKGPVIALEFNGD---GAVEVCQLIVN 316 VQ +++A +F K PD+ +L K P LE D A ++ N Sbjct: 254 VQIGSNNIRAHVGDFIFTSKLVDGRFPDYRRVLPKNPDKHLEAGCDLLKQAFARAAILSN 313 Query: 317 EIFNGTKMFVSES----------KETASGDVDSFYNFADIQMG 349 E F G +++VSE+ +E A +D Y+ A++++G Sbjct: 314 EKFRGVRLYVSENQLKITANNPEQEEAEEILDVTYSGAEMEIG 356 >5X06-A nrPDB Length = 386 Score = 30.0 bits (66), Expect = 1.6, Method: Composition-based stats. Identities = 27/103 (26%), Positives = 46/103 (44%), Gaps = 18/103 (17%) Query: 265 VQTKEVSMKAEDAQRVFREKA-----PDFLPLLNKGPVIALEFNGD---GAVEVCQLIVN 316 VQ +++A +F K PD+ +L K P LE D A ++ N Sbjct: 236 VQIGSNNIRAHVGDFIFTSKLVDGRFPDYRRVLPKNPDKHLEAGCDLLKQAFARAAILSN 295 Query: 317 EIFNGTKMFVSES----------KETASGDVDSFYNFADIQMG 349 E F G +++VSE+ +E A +D Y+ A++++G Sbjct: 296 EKFRGVRLYVSENQLKITANNPEQEEAEEILDVTYSGAEMEIG 338 >3PRV-A nrPDB Length = 157 Score = 30.0 bits (66), Expect = 1.6, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 31/63 (49%), Gaps = 5/63 (7%) Query: 252 KLIDEMVGKGFFLVQTKEVSMKAEDAQRVFREKAP-----DFLPLLNKGPVIALEFNGDG 306 ++I KG+ LV K + AE AQ+ + + A D + + GP++ + + G G Sbjct: 28 EIIQRFEKKGYKLVALKMLQPSAEQAQQHYIDLASKPFYKDLVAYFSSGPIVGMVWEGKG 87 Query: 307 AVE 309 V+ Sbjct: 88 VVK 90 >4B2T-G nrPDB Length = 545 Score = 30.0 bits (66), Expect = 1.8, Method: Composition-based stats. Identities = 20/89 (22%), Positives = 41/89 (46%), Gaps = 22/89 (24%) Query: 207 LKAVRVSTEANRSIVPISRGQRQKSSDESCLVVLFAGDY----------------TIANA 250 L+ ++V A +S++ ISR Q ++ D + V++ AG+ I+ Sbjct: 67 LREIQVQHPAAKSMIEISRTQDEEVGDGTTSVIILAGEMLSVAEHFLEQQMHPTVVISAY 126 Query: 251 RKLIDEMVGKGFFLVQTKEVSMKAEDAQR 279 RK +D+M+ K++S+ + + R Sbjct: 127 RKALDDMIST------LKKISIPVDTSNR 149 >5HI2-A nrPDB Length = 283 Score = 29.6 bits (65), Expect = 2.0, Method: Composition-based stats. Identities = 28/103 (27%), Positives = 39/103 (37%), Gaps = 26/103 (25%) Query: 161 DAGLSIFNNTWSNIHDFTPVSGELNWSLLPEDAVVQDYVPIPTTEELKAVRVSTEANRSI 220 D GL+ + WS H F +SG + W + PE +QD P ++ A + Sbjct: 154 DFGLATVKSRWSGSHQFEQLSGSILW-MAPEVIRMQDSNPYSFQSDVYAFGI-------- 204 Query: 221 VPISRGQRQKSSDESCLVVLFAGD--YTIANARKLIDEMVGKG 261 L L G Y+ N R I EMVG+G Sbjct: 205 ---------------VLYELMTGQLPYSNINNRDQIIEMVGRG 232 >6AY1-A nrPDB Length = 145 Score = 29.6 bits (65), Expect = 2.1, Method: Composition-based stats. Identities = 16/62 (25%), Positives = 29/62 (46%), Gaps = 5/62 (8%) Query: 252 KLIDEMVGKGFFLVQTKEVSMKAEDAQRVF---REKA--PDFLPLLNKGPVIALEFNGDG 306 K+ID G ++ K + + +DA+ + RE+ D + + GPV+ + G Sbjct: 29 KIIDRFESNGLEVIAMKRLHLSVKDAENFYAIHRERPFFKDLIEFMVSGPVVVMVLEGKD 88 Query: 307 AV 308 AV Sbjct: 89 AV 90 >2VU5-A nrPDB Length = 148 Score = 29.6 bits (65), Expect = 2.2, Method: Composition-based stats. Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 9/71 (12%) Query: 251 RKLIDEMVG----KGFFLVQTKEVSMKAEDAQRVF--REKAPDF---LPLLNKGPVIALE 301 R I E+V KGF LV K + + E A + + E+ P F + + GPV A+ Sbjct: 15 RAFIGEIVARFEKKGFQLVGAKLMQVTPEIAGQHYAEHEEKPFFGELVDFITSGPVFAMV 74 Query: 302 FNGDGAVEVCQ 312 + G+G V+ + Sbjct: 75 WQGEGVVDTAR 85 >1NSK-R nrPDB Length = 152 Score = 28.9 bits (63), Expect = 3.3, Method: Composition-based stats. Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 9/76 (11%) Query: 251 RKLIDEMVG----KGFFLVQTKEVSMKAEDAQRVF-----REKAPDFLPLLNKGPVIALE 301 R L+ E++ KGF LV K + E ++ + R P + +N GPV+A+ Sbjct: 18 RGLVGEIIKRFEQKGFRLVAMKFLRASEEHLKQHYIDLKDRPFFPGLVKYMNSGPVVAMV 77 Query: 302 FNGDGAVEVCQLIVNE 317 + G V+ ++++ E Sbjct: 78 WEGLNVVKTGRVMLGE 93 >3PJ9-A nrPDB Length = 140 Score = 28.9 bits (63), Expect = 3.4, Method: Composition-based stats. Identities = 16/62 (25%), Positives = 27/62 (43%), Gaps = 5/62 (8%) Query: 252 KLIDEMVGKGFFLVQTKEVSMKAEDAQRVF-----REKAPDFLPLLNKGPVIALEFNGDG 306 K++D G + K+V + E A+ + R D + + GPV+ G+G Sbjct: 23 KILDRFESNGLRIAAMKKVQLSKEQAENFYAVHKERPFFKDLVEFMISGPVVVSILEGEG 82 Query: 307 AV 308 AV Sbjct: 83 AV 84 >1W7W-A nrPDB Length = 182 Score = 28.9 bits (63), Expect = 3.4, Method: Composition-based stats. Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 9/67 (13%) Query: 251 RKLIDEMVG----KGFFLVQTKEVSMKAEDAQRVFRE--KAPDFLPL---LNKGPVIALE 301 R LI E++ KGF LV K + + AQ+ + + + P F L L+ GPVIA+ Sbjct: 46 RGLISEIISRFERKGFKLVGIKVLIPTKQFAQQHYHDLKERPFFNGLCDFLSSGPVIAMV 105 Query: 302 FNGDGAV 308 + G+G + Sbjct: 106 WEGEGVI 112 >5Y88-V nrPDB Length = 322 Score = 28.5 bits (62), Expect = 4.1, Method: Composition-based stats. Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 4/74 (5%) Query: 223 ISRGQRQKSSDE--SCLVVLFAGDYTIANARKLIDEMVGKGFFLVQTKEVSMKAEDAQRV 280 +S+G KS+++ + L VLF D N+ + I+EMV K +Q K+V M+ + ++ Sbjct: 247 LSKGNINKSNEKIITPLPVLFPDDDESGNSIERINEMVSK--ICLQRKKVEMRLQALEKT 304 Query: 281 FREKAPDFLPLLNK 294 + L+NK Sbjct: 305 KIDLEKSKASLINK 318 >4UOG-A nrPDB Length = 151 Score = 28.5 bits (62), Expect = 4.9, Method: Composition-based stats. Identities = 19/76 (25%), Positives = 37/76 (48%), Gaps = 9/76 (11%) Query: 251 RKLIDEMV----GKGFFLVQTKEVSMKAEDAQRVFREKA-----PDFLPLLNKGPVIALE 301 R LI E++ KGF L K + + ++ + + A P ++ GPV+A+ Sbjct: 17 RGLIGEIIKRFEAKGFKLAGMKYIQASEDLLKQHYIDLADKPFYPGLCKYMSSGPVVAMC 76 Query: 302 FNGDGAVEVCQLIVNE 317 + G G V+ ++++ E Sbjct: 77 WEGTGVVKTARVMMGE 92 >5U2I-A nrPDB Length = 159 Score = 28.1 bits (61), Expect = 5.8, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 5/61 (8%) Query: 260 KGFFLVQTKEVSMKAEDAQRVFREK--APDF---LPLLNKGPVIALEFNGDGAVEVCQLI 314 KGF LV K ++ A+ A++ + E P F + L GPV A+ + G G V + + Sbjct: 38 KGFKLVALKLITPSADLAKKHYAEHDGKPFFNGLVEFLTSGPVAAMVWEGKGVVAAARKM 97 Query: 315 V 315 + Sbjct: 98 I 98 >2NNL-D nrPDB Length = 337 Score = 28.1 bits (61), Expect = 6.6, Method: Composition-based stats. Identities = 11/36 (30%), Positives = 17/36 (47%), Gaps = 2/36 (5%) Query: 59 GQQFLIQDCENCNIYIFDHSA--TVTIDDCTNCIIF 92 GQ + D N +IY+F++ I +CII Sbjct: 226 GQFVHLDDLCNAHIYLFENPKAEGRYICSSHDCIIL 261 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.317 0.135 0.393 Lambda K H 0.267 0.0414 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 14,069,882 Number of Sequences: 36641 Number of extensions: 576759 Number of successful extensions: 1478 Number of sequences better than 10.0: 22 Number of HSP's better than 10.0 without gapping: 10 Number of HSP's successfully gapped in prelim test: 38 Number of HSP's that attempted gapping in prelim test: 1451 Number of HSP's gapped (non-prelim): 50 length of query: 350 length of database: 10,336,785 effective HSP length: 98 effective length of query: 252 effective length of database: 6,745,967 effective search space: 1699983684 effective search space used: 1699983684 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 60 (27.7 bits)