BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= O75689 (374 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 3FM8-C nrPDB 783 0.0 2IQJ-A nrPDB 94 1e-19 3T9K-A nrPDB 93 2e-19 2CRR-A nrPDB 91 6e-19 3LVQ-E nrPDB 83 2e-16 2B0O-E nrPDB 83 2e-16 1DCQ-A nrPDB 77 9e-15 3O47-A nrPDB 71 8e-13 3SUB-A nrPDB 70 1e-12 3DWD-A nrPDB 69 2e-12 5NZS-P nrPDB 68 7e-12 2P57-A nrPDB 67 1e-11 2CRW-A nrPDB 66 3e-11 2OLM-A nrPDB 64 1e-10 2D9L-A nrPDB 64 1e-10 2OWA-A nrPDB 57 1e-08 1U5K-A nrPDB 40 0.002 4H6Y-A nrPDB 35 0.038 5C6R-A nrPDB 32 0.52 4IAP-A nrPDB 32 0.60 2DA0-A nrPDB 31 0.94 6BBQ-A nrPDB 30 1.2 2R09-A nrPDB 30 1.3 3R84-A nrPDB 30 1.5 5OQM-c nrPDB 30 1.7 3J1O-H nrPDB 30 2.5 1V5U-A nrPDB 30 2.5 4BBK-A nrPDB 29 3.0 4JLV-A nrPDB 28 4.5 5DQP-A nrPDB 28 9.5 >3FM8-C nrPDB Length = 392 Score = 783 bits (2021), Expect = 0.0, Method: Compositional matrix adjust. Identities = 373/374 (99%), Positives = 373/374 (99%) Query: 1 MAKERRRAVLELLQRPGNARCADCGAPDPDWASYTLGVFICLSCSGIHRNIPQVSKVKSV 60 MAKERRRAVLELLQRPGNARCADCGAPDPDWASYTLGVFICLSCSGIHRNIPQVSKVKSV Sbjct: 19 MAKERRRAVLELLQRPGNARCADCGAPDPDWASYTLGVFICLSCSGIHRNIPQVSKVKSV 78 Query: 61 RLDAWEEAQVEFMASHGNDAARARFESKVPSFYYRPTPSDCQLLREQWIRAKYERQEFIY 120 RLDAWEEAQVEFMASHGNDAARARFESKVPSFYYRPTPSDCQLLREQWIRAKYERQEFIY Sbjct: 79 RLDAWEEAQVEFMASHGNDAARARFESKVPSFYYRPTPSDCQLLREQWIRAKYERQEFIY 138 Query: 121 PEKQEPYSAGYREGFLWKRGRDNGQFLSRKFVLTEREGALKYFNRNDAKEPKAVMKIEHL 180 PEKQEPYSAGYREGFLWKRGRDNGQFLSRKFVLTEREGALKYFNRNDAKEPKAVMKIEHL Sbjct: 139 PEKQEPYSAGYREGFLWKRGRDNGQFLSRKFVLTEREGALKYFNRNDAKEPKAVMKIEHL 198 Query: 181 NATFQPAKIGHPHGLQVTYLKDNSTRNIFIYHEDGKEIVDWFNALRAARFHYLQVAFPGA 240 NATFQPAKIGHPHGLQVTYLKDNSTRNIFIYHEDGKEIVDWFNALRAARFHYLQVAFPGA Sbjct: 199 NATFQPAKIGHPHGLQVTYLKDNSTRNIFIYHEDGKEIVDWFNALRAARFHYLQVAFPGA 258 Query: 241 GDADLVPKLSRNYLKEGYMEKTGPKQTEGFRKRWFTMDDRRLMYFKDPLDAFARGEVFIG 300 DADLVPKLSRNYLKEGYMEKTGPKQTEGFRKRWFTMDDRRLMYFKDPLDAFARGEVFIG Sbjct: 259 SDADLVPKLSRNYLKEGYMEKTGPKQTEGFRKRWFTMDDRRLMYFKDPLDAFARGEVFIG 318 Query: 301 SKESGYTVLHGFPPSTQGHHWPHGITIVTPDRKFLFACETESDQREWVAAFQKAVDRPML 360 SKESGYTVLHGFPPSTQGHHWPHGITIVTPDRKFLFACETESDQREWVAAFQKAVDRPML Sbjct: 319 SKESGYTVLHGFPPSTQGHHWPHGITIVTPDRKFLFACETESDQREWVAAFQKAVDRPML 378 Query: 361 PQEYAVEAHFKHKP 374 PQEYAVEAHFKHKP Sbjct: 379 PQEYAVEAHFKHKP 392 >2IQJ-A nrPDB Length = 134 Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 49/118 (41%), Positives = 72/118 (61%), Gaps = 5/118 (4%) Query: 4 ERRRAVL-ELLQRPGNARCADCGAPDPDWASYTLGVFICLSCSGIHRNI-PQVSKVKSVR 61 +R +AVL LL N CADC + P WAS+ +GVFIC+ C+GIHRN+ +S+VKSV Sbjct: 12 DRYQAVLANLLLEEDNKFCADCQSKGPRWASWNIGVFICIRCAGIHRNLGVHISRVKSVN 71 Query: 62 LDAWEEAQVEFMASHGNDAARARFESKVPSFYYRPTPSDCQLLREQWIRAKYERQEFI 119 LD W + Q++ M GN A +E+ +P + RP E +IR KYE+++++ Sbjct: 72 LDQWTQEQIQCMQEMGNGKANRLYEAYLPETFRRPQIDPAV---EGFIRDKYEKKKYM 126 >3T9K-A nrPDB Length = 390 Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 45/105 (42%), Positives = 65/105 (61%), Gaps = 2/105 (1%) Query: 17 GNARCADCGAPDPDWASYTLGVFICLSCSGIHRNIP-QVSKVKSVRLDAWEEAQVEFMAS 75 GNA+C DC P P+WAS LGV +C+ CSGIHR++ SKV+S+ LD+WE V+ M Sbjct: 44 GNAQCCDCREPAPEWASINLGVTLCIQCSGIHRSLGVHFSKVRSLTLDSWEPELVKLMCE 103 Query: 76 HGNDAARARFESKVPSFYY-RPTPSDCQLLREQWIRAKYERQEFI 119 GN +E++V + +P PS + +E WI AKY ++F+ Sbjct: 104 LGNVIINQIYEARVEAMAVKKPGPSCSRQEKEAWIHAKYVEKKFL 148 >2CRR-A nrPDB Length = 141 Score = 91.3 bits (225), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 43/96 (44%), Positives = 61/96 (63%), Gaps = 2/96 (2%) Query: 3 KERRRAVL-ELLQRPGNARCADCGAPDPDWASYTLGVFICLSCSGIHRNIP-QVSKVKSV 60 E+ + +L +LL+ N CADC A P WAS+ +GVFIC+ C+GIHRN+ +S+VKSV Sbjct: 13 NEQHQLILSKLLREEDNKYCADCEAKGPRWASWNIGVFICIRCAGIHRNLGVHISRVKSV 72 Query: 61 RLDAWEEAQVEFMASHGNDAARARFESKVPSFYYRP 96 LD W Q++ M GN AR +E+ +P + RP Sbjct: 73 NLDQWTAEQIQCMQDMGNTKARLLYEANLPENFRRP 108 >3LVQ-E nrPDB Length = 497 Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 49/149 (32%), Positives = 76/149 (51%), Gaps = 10/149 (6%) Query: 9 VLELLQRPGNARCADCGAPDPDWASYTLGVFICLSCSGIHRNI-PQVSKVKSVRLDAWEE 67 + E+ RPGN++C DCGA DP W S LGV C+ CSG+HR + + S+++S+ LD Sbjct: 14 IAEVKSRPGNSQCCDCGAADPTWLSTNLGVLTCIQCSGVHRELGVRFSRMQSLTLDLLGP 73 Query: 68 AQVEFMASHGNDAARARFESKVPSFYY-RPTPSDCQLLREQWIRAKYERQEF---IYPEK 123 +++ + GN + E+++PS +P+ R +I AKY F PE Sbjct: 74 SELLLALNMGNTSFNEVMEAQLPSHGGPKPSAESDMGTRRDYIMAKYVEHRFARRCTPEP 133 Query: 124 QEPYSAGYREGFL-----WKRGRDNGQFL 147 Q ++A L + G+D GQ L Sbjct: 134 QRLWTAICNRDLLSVLEAFANGQDFGQPL 162 >2B0O-E nrPDB Length = 301 Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 49/149 (32%), Positives = 76/149 (51%), Gaps = 10/149 (6%) Query: 9 VLELLQRPGNARCADCGAPDPDWASYTLGVFICLSCSGIHRNIP-QVSKVKSVRLDAWEE 67 + E+ RPGN++C DCGA DP W S LGV C+ CSG+HR + + S+++S+ LD Sbjct: 33 IAEVKSRPGNSQCCDCGAADPTWLSTNLGVLTCIQCSGVHRELGVRFSRMQSLTLDLLGP 92 Query: 68 AQVEFMASHGNDAARARFESKVPSFYY-RPTPSDCQLLREQWIRAKYERQEF---IYPEK 123 +++ + GN + E+++PS +P+ R +I AKY F PE Sbjct: 93 SELLLALNMGNTSFNEVMEAQLPSHGGPKPSAESDMGTRRDYIMAKYVEHRFARRCTPEP 152 Query: 124 QEPYSAGYREGFL-----WKRGRDNGQFL 147 Q ++A L + G+D GQ L Sbjct: 153 QRLWTAICNRDLLSVLEAFANGQDFGQPL 181 >1DCQ-A nrPDB Length = 278 Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 40/118 (33%), Positives = 62/118 (52%), Gaps = 3/118 (2%) Query: 4 ERRRAVLELLQR-PGNARCADCGAPDPDWASYTLGVFICLSCSGIHRNI-PQVSKVKSVR 61 E + ++ +QR GN C DCGAPDP W S LG+ C+ CSGIHR + S+++S+ Sbjct: 2 ELTKEIISEVQRMTGNDVCCDCGAPDPTWLSTNLGILTCIECSGIHRELGVHYSRMQSLT 61 Query: 62 LDAWEEAQVEFMASHGNDAARARFESKVPSFY-YRPTPSDCQLLREQWIRAKYERQEF 118 LD +++ + GN E +PS +P P + R+ +I AKY + + Sbjct: 62 LDVLGTSELLLAKNIGNAGFNEIMECCLPSEDPVKPNPGSDMIARKDYITAKYMERRY 119 >3O47-A nrPDB Length = 329 Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 38/90 (42%), Positives = 54/90 (60%), Gaps = 2/90 (2%) Query: 1 MAKERRRAVL-ELLQRPGNARCADCGAPDPDWASYTLGVFICLSCSGIHRNI-PQVSKVK 58 MA R R VL E+ + N C +CGA +P W S T G++ICL CSG HR + +S V+ Sbjct: 19 MASPRTRKVLKEVRVQDENNVCFECGAFNPQWVSVTYGIWICLECSGRHRGLGVHLSFVR 78 Query: 59 SVRLDAWEEAQVEFMASHGNDAARARFESK 88 SV +D W++ ++E M + GN R ES+ Sbjct: 79 SVTMDKWKDIELEKMKAGGNAKFREFLESQ 108 >3SUB-A nrPDB Length = 163 Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 32/104 (30%), Positives = 58/104 (55%), Gaps = 11/104 (10%) Query: 8 AVLELLQR-----PGNARCADCGAPDPDWASYTLGVFICLSCSGIHRNI-PQVSKVKSVR 61 A +E + R N +C DCG +PDW S G+F+C++CSG+HR++ +S V+S++ Sbjct: 7 AAVEFINRLKKEDESNNKCFDCGISNPDWVSVNHGIFLCINCSGVHRSLGVHISIVRSIK 66 Query: 62 LDAWEEAQVEFMASHGNDAARARFESK-----VPSFYYRPTPSD 100 +D + + Q++++ GN + E+ +P YR +D Sbjct: 67 MDIFTDEQLKYIDKGGNKKCQTYLENYGISDFIPERKYRTKAAD 110 >3DWD-A nrPDB Length = 147 Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 38/90 (42%), Positives = 54/90 (60%), Gaps = 2/90 (2%) Query: 1 MAKERRRAVL-ELLQRPGNARCADCGAPDPDWASYTLGVFICLSCSGIHRNI-PQVSKVK 58 MA R R VL E+ + N C +CGA +P W S T G++ICL CSG HR + +S V+ Sbjct: 20 MASPRTRKVLKEVRVQDENNVCFECGAFNPQWVSVTYGIWICLECSGRHRGLGVHLSFVR 79 Query: 59 SVRLDAWEEAQVEFMASHGNDAARARFESK 88 SV +D W++ ++E M + GN R ES+ Sbjct: 80 SVTMDKWKDIELEKMKAGGNAKFREFLESQ 109 >5NZS-P nrPDB Length = 520 Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 33/72 (45%), Positives = 43/72 (59%), Gaps = 2/72 (2%) Query: 16 PGNARCADCGAPDPDWASYTLGVFICLSCSGIHRNIP-QVSKVKSVRLDA-WEEAQVEFM 73 P N C DCGA P WAS T GVF+C+ CSG+HR++ +S ++S LD+ W Q+ M Sbjct: 21 PTNKACFDCGAKSPSWASITYGVFLCIDCSGVHRSLGVHLSFIRSTELDSNWSWLQLRCM 80 Query: 74 ASHGNDAARARF 85 GN A A F Sbjct: 81 QVGGNANATAFF 92 >2P57-A nrPDB Length = 144 Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 37/84 (44%), Positives = 49/84 (58%), Gaps = 8/84 (9%) Query: 4 ERRRAVLELLQRPGNARCADCGAPDPDWASYTLGVFICLSCSGIHRNIP-QVSKVKSVRL 62 +R RAV P N C DCGA +P WAS T GVF+C+ CSG+HR++ +S ++S L Sbjct: 29 KRLRAV------PTNKACFDCGAKNPSWASITYGVFLCIDCSGVHRSLGVHLSFIRSTEL 82 Query: 63 DA-WEEAQVEFMASHGNDAARARF 85 D+ W Q+ M GN A A F Sbjct: 83 DSNWNWFQLRCMQVGGNANATAFF 106 >2CRW-A nrPDB Length = 149 Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 34/86 (39%), Positives = 51/86 (59%), Gaps = 6/86 (6%) Query: 6 RRAVLELLQR----PGNARCADCGAPDPDWASYTLGVFICLSCSGIHRNIP-QVSKVKSV 60 ++ +L + +R P N C DCGA +P WAS T GVF+C+ CSG HR++ +S ++S Sbjct: 13 KQDILTIFKRLRSVPTNKVCFDCGAKNPSWASITYGVFLCIDCSGSHRSLGVHLSFIRST 72 Query: 61 RLDA-WEEAQVEFMASHGNDAARARF 85 LD+ W Q+ M GN +A + F Sbjct: 73 ELDSNWSWFQLRCMQVGGNASASSFF 98 >2OLM-A nrPDB Length = 140 Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 34/116 (29%), Positives = 61/116 (52%), Gaps = 14/116 (12%) Query: 16 PGNARCADCGAPDPDWASYTLGVFICLSCSGIHRNIPQVSKVKSVRLDAWEEAQVEFMAS 75 P N +C DC P + + T+G F+C SCSG R + +VKS+ + + + ++EF+ Sbjct: 23 PHNRKCFDCDQRGPTYVNMTVGSFVCTSCSGSLRGLNPPHRVKSISMTTFTQQEIEFLQK 82 Query: 76 HGNDAARARF-------ESKVPSFYYRPTPSDCQLLREQWIRAKYERQEFIYPEKQ 124 HGN+ + + S +P F D Q ++E +++ KYE++ + P +Q Sbjct: 83 HGNEVCKQIWLGLFDDRSSAIPDF------RDPQKVKE-FLQEKYEKKRWYVPPEQ 131 >2D9L-A nrPDB Length = 134 Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 34/125 (27%), Positives = 65/125 (52%), Gaps = 14/125 (11%) Query: 7 RAVLELLQRPGNARCADCGAPDPDWASYTLGVFICLSCSGIHRNIPQVSKVKSVRLDAWE 66 + + ++ P N +C DC P + + T+G F+C SCSG R + +VKS+ + + Sbjct: 9 KMLRDMTGLPHNRKCFDCDQRGPTYVNMTVGSFVCTSCSGSLRGLNPPHRVKSISMTTFT 68 Query: 67 EAQVEFMASHGNDAARARF-------ESKVPSFYYRPTPSDCQLLREQWIRAKYERQEFI 119 + ++EF+ HGN+ + + S +P F D Q ++E +++ KYE++ + Sbjct: 69 QQEIEFLQKHGNEVCKQIWLGLFDDRSSAIPDF------RDPQKVKE-FLQEKYEKKRWY 121 Query: 120 YPEKQ 124 P +Q Sbjct: 122 VPPEQ 126 >2OWA-A nrPDB Length = 138 Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 30/74 (40%), Positives = 40/74 (54%), Gaps = 1/74 (1%) Query: 14 QRPGNARCADCGAPDPDWASYTLGVFICLSCSGIHRNI-PQVSKVKSVRLDAWEEAQVEF 72 RP N C DC + +P W S + VFICL+CS HR + +S V+S LD + Q+ Sbjct: 32 NRPENRTCFDCESRNPTWLSLSFAVFICLNCSSDHRKMGVHISFVRSSDLDKFTPIQLVR 91 Query: 73 MASHGNDAARARFE 86 M GN AR F+ Sbjct: 92 MDIGGNGRARNYFK 105 >1U5K-A nrPDB Length = 244 Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust. Identities = 24/76 (31%), Positives = 31/76 (40%), Gaps = 15/76 (19%) Query: 16 PGNARCADCGAPDPDWASYTLGVFICLSCSGIHRNIPQVSKVKSVRLDAWEEAQVEFMAS 75 P ARCA CGAPDP+ G +C C+ L + A ++F+ Sbjct: 148 PQTARCARCGAPDPEHPDPLGGQLLCSKCAA---------------LPPYPPAVLDFLRH 192 Query: 76 HGNDAARARFESKVPS 91 RA FE VPS Sbjct: 193 AVRRTVRASFEQPVPS 208 >4H6Y-A nrPDB Length = 501 Score = 35.4 bits (80), Expect = 0.038, Method: Compositional matrix adjust. Identities = 32/130 (24%), Positives = 55/130 (42%), Gaps = 14/130 (10%) Query: 229 RFHYLQVAFPGAGDADLVPKLSRNYLKEGYMEKTGPKQTEGFRKRWFTMDDRRLMYFKDP 288 + H L+ G D +VP R +++ G + K K G ++R F + + L+Y Sbjct: 205 KLHELKKDLIGI-DNLVVP--GREFIRLGSLSKLSGK---GLQQRMFFLFNDVLLYTSRG 258 Query: 289 LDAFARGEVFIGSKESGYTVLHGFPPSTQGHHW--PHGITIVTPDRKFLFACETESDQRE 346 L A + +V G L+G W PH +T+ + + A + S+ + Sbjct: 259 LTASNQFKV------HGQLPLYGMTIEESEDEWGVPHCLTLRGQRQSIIVAASSRSEMEK 312 Query: 347 WVAAFQKAVD 356 WV Q A+D Sbjct: 313 WVEDIQMAID 322 >5C6R-A nrPDB Length = 150 Score = 31.6 bits (70), Expect = 0.52, Method: Compositional matrix adjust. Identities = 27/119 (22%), Positives = 49/119 (41%), Gaps = 17/119 (14%) Query: 134 GFLWKRGRDNGQFLSRK--FVLTEREGALKYFNRNDAKEPKAVMKIEHLNATFQPAKIGH 191 G+ + + N ++ S K F+L + +G K + R ++ I H + QPAK+ Sbjct: 25 GYSMHQLQGNKEYGSEKKGFLLKKSDGIRKVWQRRKCAVKNGILTISHATSNRQPAKL-- 82 Query: 192 PHGLQVTYLKDNS-----------TRNIFIYHEDGKEIVDWFNALRAARFHYLQVAFPG 239 L +K N+ R ED ++ + W + L ++ L +AF G Sbjct: 83 --NLLTCQVKPNAEDKKSFDLISHNRTYHFQAEDEQDYIAWISVLTNSKEEALTMAFRG 139 >4IAP-A nrPDB Length = 260 Score = 31.6 bits (70), Expect = 0.60, Method: Compositional matrix adjust. Identities = 23/91 (25%), Positives = 38/91 (41%), Gaps = 14/91 (15%) Query: 268 EGFRKRWFTMDDR--RLMYFKDPLDAFARGEVFIGSKESGYTVLHGFPPSTQGHHWPHGI 325 +GF+KR+FT+D R L Y+ + + RGE+ I S + I Sbjct: 182 QGFKKRFFTLDFRYGTLSYYLNDHNQTCRGEIVIS------------LSSVSANKKDKII 229 Query: 326 TIVTPDRKFLFACETESDQREWVAAFQKAVD 356 I + ++ T+ + + WV A Q D Sbjct: 230 IIDSGMEVWVLKATTKENWQSWVDALQTCFD 260 >2DA0-A nrPDB Length = 114 Score = 30.8 bits (68), Expect = 0.94, Method: Composition-based stats. Identities = 23/102 (22%), Positives = 41/102 (40%), Gaps = 15/102 (14%) Query: 149 RKFVLTEREGALKYFNRNDAKEPKAVMKIEHLNATFQPAKIGHPHGLQVTYLKDNS---- 204 + ++L + +G K + R ++ I H + QPAK+ L +K N+ Sbjct: 13 KGYLLKKSDGIRKVWQRRKCSVKNGILTISHATSNRQPAKL----NLLTCQVKPNAEDKK 68 Query: 205 -------TRNIFIYHEDGKEIVDWFNALRAARFHYLQVAFPG 239 R ED ++ V W + L ++ L +AF G Sbjct: 69 SFDLISHNRTYHFQAEDEQDYVAWISVLTNSKEEALTMAFSG 110 >6BBQ-A nrPDB Length = 520 Score = 30.4 bits (67), Expect = 1.2, Method: Compositional matrix adjust. Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 2/50 (4%) Query: 132 REGFLWKRGRDNGQFLSRKFVLTEREGALKYFNRNDAKEPKAVMKIEHLN 181 REG+L K G + R F+LT+ L YF KEP+ ++ +E+L+ Sbjct: 215 REGWLLKLGGRVKTWKRRWFILTD--NCLYYFEYTTDKEPRGIIPLENLS 262 Score = 29.3 bits (64), Expect = 2.5, Method: Compositional matrix adjust. Identities = 24/93 (25%), Positives = 43/93 (46%), Gaps = 12/93 (12%) Query: 255 KEGYMEKTGPKQTEGFRKRWFTMDDRRLMYFKDPLDAFARGEVFIGSKESGYTVLHGFPP 314 +EG++ K G + + +++RWF + D L YF+ D RG + + ++ P Sbjct: 215 REGWLLKLGGR-VKTWKRRWFILTDNCLYYFEYTTDKEPRGIIPL----ENLSIREVEDP 269 Query: 315 STQGHHWPHGITIVTPDRK--FLFACETESDQR 345 P+ + P K + AC+TE+D R Sbjct: 270 RK-----PNCFELYNPSHKGQVIKACKTEADGR 297 >2R09-A nrPDB Length = 347 Score = 30.4 bits (67), Expect = 1.3, Method: Compositional matrix adjust. Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 2/50 (4%) Query: 132 REGFLWKRGRDNGQFLSRKFVLTEREGALKYFNRNDAKEPKAVMKIEHLN 181 REG+L K G + R F+LT+ L YF KEP+ ++ +E+L+ Sbjct: 215 REGWLLKLGGRVKTWKRRWFILTD--NCLYYFEYTTDKEPRGIIPLENLS 262 Score = 29.6 bits (65), Expect = 2.3, Method: Compositional matrix adjust. Identities = 24/93 (25%), Positives = 43/93 (46%), Gaps = 12/93 (12%) Query: 255 KEGYMEKTGPKQTEGFRKRWFTMDDRRLMYFKDPLDAFARGEVFIGSKESGYTVLHGFPP 314 +EG++ K G + + +++RWF + D L YF+ D RG + + ++ P Sbjct: 215 REGWLLKLGGR-VKTWKRRWFILTDNCLYYFEYTTDKEPRGIIPL----ENLSIREVEDP 269 Query: 315 STQGHHWPHGITIVTPDRK--FLFACETESDQR 345 P+ + P K + AC+TE+D R Sbjct: 270 RK-----PNCFELYNPSHKGQVIKACKTEADGR 297 >3R84-A nrPDB Length = 86 Score = 30.0 bits (66), Expect = 1.5, Method: Composition-based stats. Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 3/44 (6%) Query: 66 EEAQVEFM---ASHGNDAARARFESKVPSFYYRPTPSDCQLLRE 106 E +QV F+ GN++ + +FE+ V FY R S QL +E Sbjct: 23 EASQVTFIFGELKRGNESVKPQFENHVKQFYERLDKSTTQLRKE 66 >5OQM-c nrPDB Length = 115 Score = 30.0 bits (66), Expect = 1.7, Method: Composition-based stats. Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 3/44 (6%) Query: 66 EEAQVEFM---ASHGNDAARARFESKVPSFYYRPTPSDCQLLRE 106 E +QV F+ GN++ + +FE+ V FY R S QL +E Sbjct: 26 EASQVTFIFGELKRGNESVKPQFENHVKQFYERLDKSTTQLRKE 69 >3J1O-H nrPDB Length = 131 Score = 29.6 bits (65), Expect = 2.5, Method: Compositional matrix adjust. Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 3/45 (6%) Query: 65 WEEAQVEFM---ASHGNDAARARFESKVPSFYYRPTPSDCQLLRE 106 E +QV F+ GN++ + +FE+ V FY R S QL +E Sbjct: 41 QEASQVTFIFGELKRGNESVKPQFENHVKQFYERLDKSTTQLRKE 85 >1V5U-A nrPDB Length = 117 Score = 29.6 bits (65), Expect = 2.5, Method: Compositional matrix adjust. Identities = 20/79 (25%), Positives = 38/79 (48%), Gaps = 2/79 (2%) Query: 133 EGFLWKRGRDNGQFLSRKFVLTEREGALKYFNRNDAKEPKAVMKIEHLNATFQPA-KIGH 191 EG L+K+G + +R FVL + + L+Y++ E K V+ + + A IG Sbjct: 11 EGILYKKGAFMKPWKARWFVLDKTKHQLRYYDHRMDTECKGVIDLAEVEAVAPGTPTIGA 70 Query: 192 PHGL-QVTYLKDNSTRNIF 209 P + + + +TR ++ Sbjct: 71 PKTVDEKAFFDVKTTRRVY 89 >4BBK-A nrPDB Length = 165 Score = 29.3 bits (64), Expect = 3.0, Method: Compositional matrix adjust. Identities = 29/122 (23%), Positives = 48/122 (39%), Gaps = 14/122 (11%) Query: 233 LQVAFPGAGDADLVPKLSRNYLKEGYMEKTGPKQTEGFRKRWFTMDDRRLMYFKDPLDAF 292 L+V F G D +PKL+ +YLK + + + ++ WF D + YFK+ Sbjct: 12 LEVLFQGPEDITDIPKLA-DYLK---LFRPKKLMLKACKQYWFVFKDTSIAYFKN--KEL 65 Query: 293 ARGEVFIGSKESGYTVLHGFPPSTQGHHWPHGITIVTPD----RKFLFACETESDQREWV 348 +GE G ++ P GI ++ P + C+ E W+ Sbjct: 66 EQGEPIEKLNLRGCEIV----PDVNVSGRKFGIKLLIPVADGMNEVYLRCDHEDQYARWM 121 Query: 349 AA 350 AA Sbjct: 122 AA 123 >4JLV-A nrPDB Length = 269 Score = 28.5 bits (62), Expect = 4.5, Method: Compositional matrix adjust. Identities = 18/68 (26%), Positives = 31/68 (45%), Gaps = 10/68 (14%) Query: 201 KDNSTRNIFIYHEDGKEIVDWFNALRA--------ARFHYLQVAF--PGAGDADLVPKLS 250 K+N+T +F+Y + I + F +R+ L V PGAG + +V ++ Sbjct: 45 KENTTTTLFVYEKPKSTISEKFRGIRSNIMFSKANGEVKRLLVTSEKPGAGKSTVVSNVA 104 Query: 251 RNYLKEGY 258 Y + GY Sbjct: 105 ITYAQAGY 112 >5DQP-A nrPDB Length = 430 Score = 27.7 bits (60), Expect = 9.5, Method: Compositional matrix adjust. Identities = 21/75 (28%), Positives = 34/75 (45%), Gaps = 5/75 (6%) Query: 298 FIGSKESGYTVLHGFPPSTQGHHWPHGITIVTPDRKFLFACETESDQREWVAAFQKAVDR 357 F+GSK +G + + + P G T+V P L TE++ + VA ++ +D Sbjct: 233 FLGSKPAGRRFVAEARAAARAQGRPEGSTLVLPSFVPLIGS-TEAEVKRLVAEYEAGLD- 290 Query: 358 PMLPQEYAVEAHFKH 372 P E +EA K Sbjct: 291 ---PAEQRIEALSKQ 302 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 3FM8-C nrPDB 716 0.0 3LVQ-E nrPDB 185 3e-47 2B0O-E nrPDB 185 3e-47 2IQJ-A nrPDB 154 8e-38 3T9K-A nrPDB 144 5e-35 1DCQ-A nrPDB 143 1e-34 2D9L-A nrPDB 141 6e-34 2OLM-A nrPDB 140 1e-33 2CRR-A nrPDB 136 1e-32 3O47-A nrPDB 121 4e-28 3DWD-A nrPDB 120 1e-27 3SUB-A nrPDB 117 6e-27 2CRW-A nrPDB 117 9e-27 2P57-A nrPDB 116 2e-26 5NZS-P nrPDB 112 2e-25 2OWA-A nrPDB 110 1e-24 1U5K-A nrPDB 81 7e-16 Sequences not found previously or not previously below threshold: 4H6Y-A nrPDB 33 0.16 2DA0-A nrPDB 33 0.17 5C6R-A nrPDB 33 0.22 6BBQ-A nrPDB 33 0.27 2R09-A nrPDB 32 0.44 2L80-A nrPDB 32 0.67 4BBK-A nrPDB 31 0.95 4IAP-A nrPDB 31 1.1 4HJQ-A nrPDB 31 1.1 2B3O-A nrPDB 31 1.1 3PS5-A nrPDB 30 1.5 5ZCD-A nrPDB 30 1.5 5L81-A nrPDB 28 4.4 1II2-A nrPDB 28 7.4 CONVERGED! >3FM8-C nrPDB Length = 392 Score = 716 bits (1848), Expect = 0.0, Method: Composition-based stats. Identities = 373/374 (99%), Positives = 373/374 (99%) Query: 1 MAKERRRAVLELLQRPGNARCADCGAPDPDWASYTLGVFICLSCSGIHRNIPQVSKVKSV 60 MAKERRRAVLELLQRPGNARCADCGAPDPDWASYTLGVFICLSCSGIHRNIPQVSKVKSV Sbjct: 19 MAKERRRAVLELLQRPGNARCADCGAPDPDWASYTLGVFICLSCSGIHRNIPQVSKVKSV 78 Query: 61 RLDAWEEAQVEFMASHGNDAARARFESKVPSFYYRPTPSDCQLLREQWIRAKYERQEFIY 120 RLDAWEEAQVEFMASHGNDAARARFESKVPSFYYRPTPSDCQLLREQWIRAKYERQEFIY Sbjct: 79 RLDAWEEAQVEFMASHGNDAARARFESKVPSFYYRPTPSDCQLLREQWIRAKYERQEFIY 138 Query: 121 PEKQEPYSAGYREGFLWKRGRDNGQFLSRKFVLTEREGALKYFNRNDAKEPKAVMKIEHL 180 PEKQEPYSAGYREGFLWKRGRDNGQFLSRKFVLTEREGALKYFNRNDAKEPKAVMKIEHL Sbjct: 139 PEKQEPYSAGYREGFLWKRGRDNGQFLSRKFVLTEREGALKYFNRNDAKEPKAVMKIEHL 198 Query: 181 NATFQPAKIGHPHGLQVTYLKDNSTRNIFIYHEDGKEIVDWFNALRAARFHYLQVAFPGA 240 NATFQPAKIGHPHGLQVTYLKDNSTRNIFIYHEDGKEIVDWFNALRAARFHYLQVAFPGA Sbjct: 199 NATFQPAKIGHPHGLQVTYLKDNSTRNIFIYHEDGKEIVDWFNALRAARFHYLQVAFPGA 258 Query: 241 GDADLVPKLSRNYLKEGYMEKTGPKQTEGFRKRWFTMDDRRLMYFKDPLDAFARGEVFIG 300 DADLVPKLSRNYLKEGYMEKTGPKQTEGFRKRWFTMDDRRLMYFKDPLDAFARGEVFIG Sbjct: 259 SDADLVPKLSRNYLKEGYMEKTGPKQTEGFRKRWFTMDDRRLMYFKDPLDAFARGEVFIG 318 Query: 301 SKESGYTVLHGFPPSTQGHHWPHGITIVTPDRKFLFACETESDQREWVAAFQKAVDRPML 360 SKESGYTVLHGFPPSTQGHHWPHGITIVTPDRKFLFACETESDQREWVAAFQKAVDRPML Sbjct: 319 SKESGYTVLHGFPPSTQGHHWPHGITIVTPDRKFLFACETESDQREWVAAFQKAVDRPML 378 Query: 361 PQEYAVEAHFKHKP 374 PQEYAVEAHFKHKP Sbjct: 379 PQEYAVEAHFKHKP 392 >3LVQ-E nrPDB Length = 497 Score = 185 bits (470), Expect = 3e-47, Method: Composition-based stats. Identities = 49/150 (32%), Positives = 76/150 (50%), Gaps = 10/150 (6%) Query: 8 AVLELLQRPGNARCADCGAPDPDWASYTLGVFICLSCSGIHRNIP-QVSKVKSVRLDAWE 66 + E+ RPGN++C DCGA DP W S LGV C+ CSG+HR + + S+++S+ LD Sbjct: 13 LIAEVKSRPGNSQCCDCGAADPTWLSTNLGVLTCIQCSGVHRELGVRFSRMQSLTLDLLG 72 Query: 67 EAQVEFMASHGNDAARARFESKVPSFYY-RPTPSDCQLLREQWIRAKYERQEF---IYPE 122 +++ + GN + E+++PS +P+ R +I AKY F PE Sbjct: 73 PSELLLALNMGNTSFNEVMEAQLPSHGGPKPSAESDMGTRRDYIMAKYVEHRFARRCTPE 132 Query: 123 KQEPYSAGYREGFL-----WKRGRDNGQFL 147 Q ++A L + G+D GQ L Sbjct: 133 PQRLWTAICNRDLLSVLEAFANGQDFGQPL 162 >2B0O-E nrPDB Length = 301 Score = 185 bits (470), Expect = 3e-47, Method: Composition-based stats. Identities = 49/150 (32%), Positives = 76/150 (50%), Gaps = 10/150 (6%) Query: 8 AVLELLQRPGNARCADCGAPDPDWASYTLGVFICLSCSGIHRNIP-QVSKVKSVRLDAWE 66 + E+ RPGN++C DCGA DP W S LGV C+ CSG+HR + + S+++S+ LD Sbjct: 32 LIAEVKSRPGNSQCCDCGAADPTWLSTNLGVLTCIQCSGVHRELGVRFSRMQSLTLDLLG 91 Query: 67 EAQVEFMASHGNDAARARFESKVPSFYY-RPTPSDCQLLREQWIRAKYERQEF---IYPE 122 +++ + GN + E+++PS +P+ R +I AKY F PE Sbjct: 92 PSELLLALNMGNTSFNEVMEAQLPSHGGPKPSAESDMGTRRDYIMAKYVEHRFARRCTPE 151 Query: 123 KQEPYSAGYREGFL-----WKRGRDNGQFL 147 Q ++A L + G+D GQ L Sbjct: 152 PQRLWTAICNRDLLSVLEAFANGQDFGQPL 181 >2IQJ-A nrPDB Length = 134 Score = 154 bits (388), Expect = 8e-38, Method: Composition-based stats. Identities = 49/118 (41%), Positives = 72/118 (61%), Gaps = 5/118 (4%) Query: 4 ERRRAVL-ELLQRPGNARCADCGAPDPDWASYTLGVFICLSCSGIHRNIP-QVSKVKSVR 61 +R +AVL LL N CADC + P WAS+ +GVFIC+ C+GIHRN+ +S+VKSV Sbjct: 12 DRYQAVLANLLLEEDNKFCADCQSKGPRWASWNIGVFICIRCAGIHRNLGVHISRVKSVN 71 Query: 62 LDAWEEAQVEFMASHGNDAARARFESKVPSFYYRPTPSDCQLLREQWIRAKYERQEFI 119 LD W + Q++ M GN A +E+ +P + RP E +IR KYE+++++ Sbjct: 72 LDQWTQEQIQCMQEMGNGKANRLYEAYLPETFRRPQIDPAV---EGFIRDKYEKKKYM 126 >3T9K-A nrPDB Length = 390 Score = 144 bits (364), Expect = 5e-35, Method: Composition-based stats. Identities = 46/118 (38%), Positives = 69/118 (58%), Gaps = 2/118 (1%) Query: 9 VLELLQRPGNARCADCGAPDPDWASYTLGVFICLSCSGIHRNIP-QVSKVKSVRLDAWEE 67 V ++ GNA+C DC P P+WAS LGV +C+ CSGIHR++ SKV+S+ LD+WE Sbjct: 36 VAQVQSVDGNAQCCDCREPAPEWASINLGVTLCIQCSGIHRSLGVHFSKVRSLTLDSWEP 95 Query: 68 AQVEFMASHGNDAARARFESKVPSFYY-RPTPSDCQLLREQWIRAKYERQEFIYPEKQ 124 V+ M GN +E++V + +P PS + +E WI AKY ++F+ + Sbjct: 96 ELVKLMCELGNVIINQIYEARVEAMAVKKPGPSCSRQEKEAWIHAKYVEKKFLTKLPE 153 >1DCQ-A nrPDB Length = 278 Score = 143 bits (361), Expect = 1e-34, Method: Composition-based stats. Identities = 40/118 (33%), Positives = 62/118 (52%), Gaps = 3/118 (2%) Query: 4 ERRRAVLELLQR-PGNARCADCGAPDPDWASYTLGVFICLSCSGIHRNIP-QVSKVKSVR 61 E + ++ +QR GN C DCGAPDP W S LG+ C+ CSGIHR + S+++S+ Sbjct: 2 ELTKEIISEVQRMTGNDVCCDCGAPDPTWLSTNLGILTCIECSGIHRELGVHYSRMQSLT 61 Query: 62 LDAWEEAQVEFMASHGNDAARARFESKVPSFY-YRPTPSDCQLLREQWIRAKYERQEF 118 LD +++ + GN E +PS +P P + R+ +I AKY + + Sbjct: 62 LDVLGTSELLLAKNIGNAGFNEIMECCLPSEDPVKPNPGSDMIARKDYITAKYMERRY 119 >2D9L-A nrPDB Length = 134 Score = 141 bits (355), Expect = 6e-34, Method: Composition-based stats. Identities = 34/125 (27%), Positives = 65/125 (52%), Gaps = 14/125 (11%) Query: 7 RAVLELLQRPGNARCADCGAPDPDWASYTLGVFICLSCSGIHRNIPQVSKVKSVRLDAWE 66 + + ++ P N +C DC P + + T+G F+C SCSG R + +VKS+ + + Sbjct: 9 KMLRDMTGLPHNRKCFDCDQRGPTYVNMTVGSFVCTSCSGSLRGLNPPHRVKSISMTTFT 68 Query: 67 EAQVEFMASHGNDAARARF-------ESKVPSFYYRPTPSDCQLLREQWIRAKYERQEFI 119 + ++EF+ HGN+ + + S +P F D Q ++E +++ KYE++ + Sbjct: 69 QQEIEFLQKHGNEVCKQIWLGLFDDRSSAIPDF------RDPQKVKE-FLQEKYEKKRWY 121 Query: 120 YPEKQ 124 P +Q Sbjct: 122 VPPEQ 126 >2OLM-A nrPDB Length = 140 Score = 140 bits (352), Expect = 1e-33, Method: Composition-based stats. Identities = 34/129 (26%), Positives = 67/129 (51%), Gaps = 14/129 (10%) Query: 3 KERRRAVLELLQRPGNARCADCGAPDPDWASYTLGVFICLSCSGIHRNIPQVSKVKSVRL 62 ++ + + ++ P N +C DC P + + T+G F+C SCSG R + +VKS+ + Sbjct: 10 EKHLKMLRDMTGLPHNRKCFDCDQRGPTYVNMTVGSFVCTSCSGSLRGLNPPHRVKSISM 69 Query: 63 DAWEEAQVEFMASHGNDAARARF-------ESKVPSFYYRPTPSDCQLLREQWIRAKYER 115 + + ++EF+ HGN+ + + S +P F D Q ++E +++ KYE+ Sbjct: 70 TTFTQQEIEFLQKHGNEVCKQIWLGLFDDRSSAIPDF------RDPQKVKE-FLQEKYEK 122 Query: 116 QEFIYPEKQ 124 + + P +Q Sbjct: 123 KRWYVPPEQ 131 >2CRR-A nrPDB Length = 141 Score = 136 bits (343), Expect = 1e-32, Method: Composition-based stats. Identities = 46/110 (41%), Positives = 65/110 (59%), Gaps = 5/110 (4%) Query: 3 KERRRAVL-ELLQRPGNARCADCGAPDPDWASYTLGVFICLSCSGIHRNIP-QVSKVKSV 60 E+ + +L +LL+ N CADC A P WAS+ +GVFIC+ C+GIHRN+ +S+VKSV Sbjct: 13 NEQHQLILSKLLREEDNKYCADCEAKGPRWASWNIGVFICIRCAGIHRNLGVHISRVKSV 72 Query: 61 RLDAWEEAQVEFMASHGNDAARARFESKVPSFYYRPTPSDCQLLREQWIR 110 LD W Q++ M GN AR +E+ +P + RP E +IR Sbjct: 73 NLDQWTAEQIQCMQDMGNTKARLLYEANLPENFRRPQTDQAV---EFFIR 119 >3O47-A nrPDB Length = 329 Score = 121 bits (304), Expect = 4e-28, Method: Composition-based stats. Identities = 38/90 (42%), Positives = 54/90 (60%), Gaps = 2/90 (2%) Query: 1 MAKERRRAVL-ELLQRPGNARCADCGAPDPDWASYTLGVFICLSCSGIHRNIP-QVSKVK 58 MA R R VL E+ + N C +CGA +P W S T G++ICL CSG HR + +S V+ Sbjct: 19 MASPRTRKVLKEVRVQDENNVCFECGAFNPQWVSVTYGIWICLECSGRHRGLGVHLSFVR 78 Query: 59 SVRLDAWEEAQVEFMASHGNDAARARFESK 88 SV +D W++ ++E M + GN R ES+ Sbjct: 79 SVTMDKWKDIELEKMKAGGNAKFREFLESQ 108 >3DWD-A nrPDB Length = 147 Score = 120 bits (301), Expect = 1e-27, Method: Composition-based stats. Identities = 38/90 (42%), Positives = 54/90 (60%), Gaps = 2/90 (2%) Query: 1 MAKERRRAVL-ELLQRPGNARCADCGAPDPDWASYTLGVFICLSCSGIHRNIP-QVSKVK 58 MA R R VL E+ + N C +CGA +P W S T G++ICL CSG HR + +S V+ Sbjct: 20 MASPRTRKVLKEVRVQDENNVCFECGAFNPQWVSVTYGIWICLECSGRHRGLGVHLSFVR 79 Query: 59 SVRLDAWEEAQVEFMASHGNDAARARFESK 88 SV +D W++ ++E M + GN R ES+ Sbjct: 80 SVTMDKWKDIELEKMKAGGNAKFREFLESQ 109 >3SUB-A nrPDB Length = 163 Score = 117 bits (294), Expect = 6e-27, Method: Composition-based stats. Identities = 32/104 (30%), Positives = 58/104 (55%), Gaps = 11/104 (10%) Query: 8 AVLELLQR-----PGNARCADCGAPDPDWASYTLGVFICLSCSGIHRNIP-QVSKVKSVR 61 A +E + R N +C DCG +PDW S G+F+C++CSG+HR++ +S V+S++ Sbjct: 7 AAVEFINRLKKEDESNNKCFDCGISNPDWVSVNHGIFLCINCSGVHRSLGVHISIVRSIK 66 Query: 62 LDAWEEAQVEFMASHGNDAARARFESK-----VPSFYYRPTPSD 100 +D + + Q++++ GN + E+ +P YR +D Sbjct: 67 MDIFTDEQLKYIDKGGNKKCQTYLENYGISDFIPERKYRTKAAD 110 >2CRW-A nrPDB Length = 149 Score = 117 bits (293), Expect = 9e-27, Method: Composition-based stats. Identities = 38/113 (33%), Positives = 56/113 (49%), Gaps = 9/113 (7%) Query: 3 KERRRAVLELLQR----PGNARCADCGAPDPDWASYTLGVFICLSCSGIHRNIP-QVSKV 57 ++ +L + +R P N C DCGA +P WAS T GVF+C+ CSG HR++ +S + Sbjct: 10 DPSKQDILTIFKRLRSVPTNKVCFDCGAKNPSWASITYGVFLCIDCSGSHRSLGVHLSFI 69 Query: 58 KSVRLDA-WEEAQVEFMASHGNDAARARFE---SKVPSFYYRPTPSDCQLLRE 106 +S LD+ W Q+ M GN +A + F + QL RE Sbjct: 70 RSTELDSNWSWFQLRCMQVGGNASASSFFHQHGCSTNDTNAKYNSRAAQLYRE 122 >2P57-A nrPDB Length = 144 Score = 116 bits (290), Expect = 2e-26, Method: Composition-based stats. Identities = 36/92 (39%), Positives = 51/92 (55%), Gaps = 6/92 (6%) Query: 2 AKERRRAVLELLQR----PGNARCADCGAPDPDWASYTLGVFICLSCSGIHRNIP-QVSK 56 A+ + + L +R P N C DCGA +P WAS T GVF+C+ CSG+HR++ +S Sbjct: 17 AEPNKTEIQTLFKRLRAVPTNKACFDCGAKNPSWASITYGVFLCIDCSGVHRSLGVHLSF 76 Query: 57 VKSVRLDA-WEEAQVEFMASHGNDAARARFES 87 ++S LD+ W Q+ M GN A A F Sbjct: 77 IRSTELDSNWNWFQLRCMQVGGNANATAFFRQ 108 >5NZS-P nrPDB Length = 520 Score = 112 bits (281), Expect = 2e-25, Method: Composition-based stats. Identities = 36/92 (39%), Positives = 49/92 (53%), Gaps = 6/92 (6%) Query: 2 AKERRRAVLELLQR----PGNARCADCGAPDPDWASYTLGVFICLSCSGIHRNIP-QVSK 56 A + + L +R P N C DCGA P WAS T GVF+C+ CSG+HR++ +S Sbjct: 3 AGPSKSEIQTLFKRLRAIPTNKACFDCGAKSPSWASITYGVFLCIDCSGVHRSLGVHLSF 62 Query: 57 VKSVRLDA-WEEAQVEFMASHGNDAARARFES 87 ++S LD+ W Q+ M GN A A F Sbjct: 63 IRSTELDSNWSWLQLRCMQVGGNANATAFFRQ 94 >2OWA-A nrPDB Length = 138 Score = 110 bits (274), Expect = 1e-24, Method: Composition-based stats. Identities = 30/79 (37%), Positives = 42/79 (53%), Gaps = 1/79 (1%) Query: 12 LLQRPGNARCADCGAPDPDWASYTLGVFICLSCSGIHRNIP-QVSKVKSVRLDAWEEAQV 70 + RP N C DC + +P W S + VFICL+CS HR + +S V+S LD + Q+ Sbjct: 30 VRNRPENRTCFDCESRNPTWLSLSFAVFICLNCSSDHRKMGVHISFVRSSDLDKFTPIQL 89 Query: 71 EFMASHGNDAARARFESKV 89 M GN AR F+ + Sbjct: 90 VRMDIGGNGRARNYFKQVL 108 >1U5K-A nrPDB Length = 244 Score = 81.2 bits (199), Expect = 7e-16, Method: Composition-based stats. Identities = 24/79 (30%), Positives = 31/79 (39%), Gaps = 15/79 (18%) Query: 16 PGNARCADCGAPDPDWASYTLGVFICLSCSGIHRNIPQVSKVKSVRLDAWEEAQVEFMAS 75 P ARCA CGAPDP+ G +C C+ L + A ++F+ Sbjct: 148 PQTARCARCGAPDPEHPDPLGGQLLCSKCAA---------------LPPYPPAVLDFLRH 192 Query: 76 HGNDAARARFESKVPSFYY 94 RA FE VPS Sbjct: 193 AVRRTVRASFEQPVPSADR 211 >4H6Y-A nrPDB Length = 501 Score = 33.5 bits (75), Expect = 0.16, Method: Composition-based stats. Identities = 29/117 (24%), Positives = 50/117 (42%), Gaps = 13/117 (11%) Query: 242 DADLVPKLSRNYLKEGYMEKTGPKQTEGFRKRWFTMDDRRLMYFKDPLDAFARGEVFIGS 301 D +VP R +++ G + K K G ++R F + + L+Y L A + +V Sbjct: 217 DNLVVP--GREFIRLGSLSKLSGK---GLQQRMFFLFNDVLLYTSRGLTASNQFKV---- 267 Query: 302 KESGYTVLHGFPPSTQGHHW--PHGITIVTPDRKFLFACETESDQREWVAAFQKAVD 356 G L+G W PH +T+ + + A + S+ +WV Q A+D Sbjct: 268 --HGQLPLYGMTIEESEDEWGVPHCLTLRGQRQSIIVAASSRSEMEKWVEDIQMAID 322 >2DA0-A nrPDB Length = 114 Score = 33.5 bits (75), Expect = 0.17, Method: Composition-based stats. Identities = 23/104 (22%), Positives = 41/104 (39%), Gaps = 15/104 (14%) Query: 149 RKFVLTEREGALKYFNRNDAKEPKAVMKIEHLNATFQPAKIGHPHGLQVTYLKDNS---- 204 + ++L + +G K + R ++ I H + QPAK+ L +K N+ Sbjct: 13 KGYLLKKSDGIRKVWQRRKCSVKNGILTISHATSNRQPAKL----NLLTCQVKPNAEDKK 68 Query: 205 -------TRNIFIYHEDGKEIVDWFNALRAARFHYLQVAFPGAG 241 R ED ++ V W + L ++ L +AF G Sbjct: 69 SFDLISHNRTYHFQAEDEQDYVAWISVLTNSKEEALTMAFSGPS 112 >5C6R-A nrPDB Length = 150 Score = 33.1 bits (74), Expect = 0.22, Method: Composition-based stats. Identities = 26/112 (23%), Positives = 46/112 (41%), Gaps = 17/112 (15%) Query: 141 RDNGQFLSRK--FVLTEREGALKYFNRNDAKEPKAVMKIEHLNATFQPAKIGHPHGLQVT 198 + N ++ S K F+L + +G K + R ++ I H + QPAK+ L Sbjct: 32 QGNKEYGSEKKGFLLKKSDGIRKVWQRRKCAVKNGILTISHATSNRQPAKL----NLLTC 87 Query: 199 YLKDNS-----------TRNIFIYHEDGKEIVDWFNALRAARFHYLQVAFPG 239 +K N+ R ED ++ + W + L ++ L +AF G Sbjct: 88 QVKPNAEDKKSFDLISHNRTYHFQAEDEQDYIAWISVLTNSKEEALTMAFRG 139 >6BBQ-A nrPDB Length = 520 Score = 32.7 bits (73), Expect = 0.27, Method: Composition-based stats. Identities = 24/93 (25%), Positives = 43/93 (46%), Gaps = 12/93 (12%) Query: 255 KEGYMEKTGPKQTEGFRKRWFTMDDRRLMYFKDPLDAFARGEVFIGSKESGYTVLHGFPP 314 +EG++ K G + + +++RWF + D L YF+ D RG + + ++ P Sbjct: 215 REGWLLKLGGR-VKTWKRRWFILTDNCLYYFEYTTDKEPRGIIPL----ENLSIREVEDP 269 Query: 315 STQGHHWPHGITIVTPDRK--FLFACETESDQR 345 P+ + P K + AC+TE+D R Sbjct: 270 RK-----PNCFELYNPSHKGQVIKACKTEADGR 297 Score = 30.8 bits (68), Expect = 1.0, Method: Composition-based stats. Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 2/50 (4%) Query: 132 REGFLWKRGRDNGQFLSRKFVLTEREGALKYFNRNDAKEPKAVMKIEHLN 181 REG+L K G + R F+LT+ L YF KEP+ ++ +E+L+ Sbjct: 215 REGWLLKLGGRVKTWKRRWFILTD--NCLYYFEYTTDKEPRGIIPLENLS 262 >2R09-A nrPDB Length = 347 Score = 31.9 bits (71), Expect = 0.44, Method: Composition-based stats. Identities = 24/93 (25%), Positives = 43/93 (46%), Gaps = 12/93 (12%) Query: 255 KEGYMEKTGPKQTEGFRKRWFTMDDRRLMYFKDPLDAFARGEVFIGSKESGYTVLHGFPP 314 +EG++ K G + + +++RWF + D L YF+ D RG + + ++ P Sbjct: 215 REGWLLKLGGR-VKTWKRRWFILTDNCLYYFEYTTDKEPRGIIPL----ENLSIREVEDP 269 Query: 315 STQGHHWPHGITIVTPDRK--FLFACETESDQR 345 P+ + P K + AC+TE+D R Sbjct: 270 RK-----PNCFELYNPSHKGQVIKACKTEADGR 297 Score = 30.4 bits (67), Expect = 1.4, Method: Composition-based stats. Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 2/50 (4%) Query: 132 REGFLWKRGRDNGQFLSRKFVLTEREGALKYFNRNDAKEPKAVMKIEHLN 181 REG+L K G + R F+LT+ L YF KEP+ ++ +E+L+ Sbjct: 215 REGWLLKLGGRVKTWKRRWFILTDN--CLYYFEYTTDKEPRGIIPLENLS 262 >2L80-A nrPDB Length = 116 Score = 31.5 bits (70), Expect = 0.67, Method: Composition-based stats. Identities = 9/40 (22%), Positives = 15/40 (37%) Query: 2 AKERRRAVLELLQRPGNARCADCGAPDPDWASYTLGVFIC 41 A + + P +CA C + W + T G +C Sbjct: 7 ANNLTQLDNGVRIPPSGWKCARCDLRENLWLNLTDGSVLC 46 >4BBK-A nrPDB Length = 165 Score = 30.8 bits (68), Expect = 0.95, Method: Composition-based stats. Identities = 29/124 (23%), Positives = 48/124 (38%), Gaps = 18/124 (14%) Query: 233 LQVAFPGAGDADLVPKLSRNYLKEGYMEKTGPKQT--EGFRKRWFTMDDRRLMYFKDPLD 290 L+V F G D +PKL+ Y++ PK+ + ++ WF D + YFK+ Sbjct: 12 LEVLFQGPEDITDIPKLA------DYLKLFRPKKLMLKACKQYWFVFKDTSIAYFKN--K 63 Query: 291 AFARGEVFIGSKESGYTVLHGFPPSTQGHHWPHGITIVTP----DRKFLFACETESDQRE 346 +GE G ++ P GI ++ P + C+ E Sbjct: 64 ELEQGEPIEKLNLRGCEIV----PDVNVSGRKFGIKLLIPVADGMNEVYLRCDHEDQYAR 119 Query: 347 WVAA 350 W+AA Sbjct: 120 WMAA 123 >4IAP-A nrPDB Length = 260 Score = 30.8 bits (68), Expect = 1.1, Method: Composition-based stats. Identities = 23/91 (25%), Positives = 38/91 (41%), Gaps = 14/91 (15%) Query: 268 EGFRKRWFTMDDR--RLMYFKDPLDAFARGEVFIGSKESGYTVLHGFPPSTQGHHWPHGI 325 +GF+KR+FT+D R L Y+ + + RGE+ I S + I Sbjct: 182 QGFKKRFFTLDFRYGTLSYYLNDHNQTCRGEIVISLS------------SVSANKKDKII 229 Query: 326 TIVTPDRKFLFACETESDQREWVAAFQKAVD 356 I + ++ T+ + + WV A Q D Sbjct: 230 IIDSGMEVWVLKATTKENWQSWVDALQTCFD 260 >4HJQ-A nrPDB Length = 308 Score = 30.8 bits (68), Expect = 1.1, Method: Composition-based stats. Identities = 19/110 (17%), Positives = 33/110 (30%), Gaps = 20/110 (18%) Query: 67 EAQVEFMASHGNDAARARFESKVPSFYYRP---------------TPSDCQLLREQWIRA 111 + E + R E + P + D + +I A Sbjct: 25 WEEFESLQKQEVKNLHQRLEGQRPENKGKNRYKNILPFDHSRVILQGRDSNIPGSDYINA 84 Query: 112 KYERQEFIYPEKQEPYSAGYREGFLWKRGRDNGQFL----SRKFVLTERE 157 Y + + + P++ + +G L D Q SR V+T RE Sbjct: 85 NYIKNQLLGPDENAK-TYIASQGCLEATVNDFWQMAWQENSRVIVMTTRE 133 >2B3O-A nrPDB Length = 532 Score = 30.8 bits (68), Expect = 1.1, Method: Composition-based stats. Identities = 19/110 (17%), Positives = 33/110 (30%), Gaps = 20/110 (18%) Query: 67 EAQVEFMASHGNDAARARFESKVPSFYYRP---------------TPSDCQLLREQWIRA 111 + E + R E + P + D + +I A Sbjct: 245 WEEFESLQKQEVKNLHQRLEGQRPENKGKNRYKNILPFDHSRVILQGRDSNIPGSDYINA 304 Query: 112 KYERQEFIYPEKQEPYSAGYREGFLWKRGRDNGQFL----SRKFVLTERE 157 Y + + + P++ + +G L D Q SR V+T RE Sbjct: 305 NYIKNQLLGPDENAK-TYIASQGCLEATVNDFWQMAWQENSRVIVMTTRE 353 >3PS5-A nrPDB Length = 595 Score = 30.0 bits (66), Expect = 1.5, Method: Composition-based stats. Identities = 19/110 (17%), Positives = 33/110 (30%), Gaps = 20/110 (18%) Query: 67 EAQVEFMASHGNDAARARFESKVPSFYYRP---------------TPSDCQLLREQWIRA 111 + E + R E + P + D + +I A Sbjct: 245 WEEFESLQKQEVKNLHQRLEGQRPENKGKNRYKNILPFDHSRVILQGRDSNIPGSDYINA 304 Query: 112 KYERQEFIYPEKQEPYSAGYREGFLWKRGRDNGQFL----SRKFVLTERE 157 Y + + + P++ + +G L D Q SR V+T RE Sbjct: 305 NYIKNQLLGPDENAK-TYIASQGCLEATVNDFWQMAWQENSRVIVMTTRE 353 >5ZCD-A nrPDB Length = 555 Score = 30.0 bits (66), Expect = 1.5, Method: Composition-based stats. Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 2/33 (6%) Query: 191 HPHGLQVTYLKDNSTRNIFIYHE--DGKEIVDW 221 HP L+ K+N R+ +I+HE DGKE +W Sbjct: 108 HPWFLESRSAKENPYRDYYIWHEGKDGKEPNNW 140 >5L81-A nrPDB Length = 150 Score = 28.5 bits (62), Expect = 4.4, Method: Composition-based stats. Identities = 33/140 (23%), Positives = 57/140 (40%), Gaps = 11/140 (7%) Query: 233 LQVAFPGAGDADLVPKLSRNYLKEGYMEKTGPKQTEGFRKRWFTMDDRRLMYFKDPLDAF 292 L+V F G +P+L +++L+ K K G+R+ W D L Y+K + Sbjct: 7 LEVLFQGTDSLTTIPEL-KDHLRIFRPRKLTLK---GYRQYWVVFKDTTLSYYKSQDE-- 60 Query: 293 ARGEVFIGSKESGYTVLHGFPPSTQGHHWPHGITIVTPD--RKFLFACETESDQREWVAA 350 A G+ G V+ + G + + + +P+ + C+ E +W+AA Sbjct: 61 APGDPTQQLNLKGCEVVPDV--NVSGQKFCIKLLVPSPEGMSEIYLRCQDEQQYAQWMAA 118 Query: 351 FQKAVD-RPMLPQEYAVEAH 369 + A R M YA E Sbjct: 119 CRLASKGRTMADSSYASEVQ 138 >1II2-A nrPDB Length = 524 Score = 28.1 bits (61), Expect = 7.4, Method: Composition-based stats. Identities = 12/53 (22%), Positives = 25/53 (47%), Gaps = 2/53 (3%) Query: 152 VLTEREGALKYFNRNDAKEPKAVMKIEHLNATFQPAKIGHPHGLQVTYLKDNS 204 VL +R G + +++ + K + + H+ A GHP V +L +++ Sbjct: 286 VLDKRTGEIDFYDESICKNTRVAYPLSHIEGALSKAIAGHPK--NVIFLTNDA 336 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.311 0.136 0.428 Lambda K H 0.267 0.0403 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 16,825,075 Number of Sequences: 36641 Number of extensions: 741790 Number of successful extensions: 1808 Number of sequences better than 10.0: 33 Number of HSP's better than 10.0 without gapping: 37 Number of HSP's successfully gapped in prelim test: 30 Number of HSP's that attempted gapping in prelim test: 1723 Number of HSP's gapped (non-prelim): 73 length of query: 374 length of database: 10,336,785 effective HSP length: 99 effective length of query: 275 effective length of database: 6,709,326 effective search space: 1845064650 effective search space used: 1845064650 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.2 bits) S2: 60 (27.7 bits)