BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= O74825 (135 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 3H0G-D nrPDB 277 1e-75 5XOG-D nrPDB 91 1e-19 5IY7-D nrPDB 88 1e-18 1WCM-D nrPDB 84 2e-17 4BY1-D nrPDB 73 4e-14 1PQV-D nrPDB 73 4e-14 1Y14-A nrPDB 73 4e-14 4OH0-A nrPDB 27 2.0 5HM3-A nrPDB 27 2.8 5IV5-U nrPDB 26 4.0 1QSA-A nrPDB 26 5.8 5XF9-A nrPDB 25 9.2 2PMZ-F nrPDB 25 9.7 >3H0G-D nrPDB Length = 135 Score = 277 bits (708), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 135/135 (100%), Positives = 135/135 (100%) Query: 1 MPRAIFEEDAAQLKLGPEFENEDMLTVSEAKILIETVLAQRARETNGEIPMTDVMKKTVA 60 MPRAIFEEDAAQLKLGPEFENEDMLTVSEAKILIETVLAQRARETNGEIPMTDVMKKTVA Sbjct: 1 MPRAIFEEDAAQLKLGPEFENEDMLTVSEAKILIETVLAQRARETNGEIPMTDVMKKTVA 60 Query: 61 YFNVFARFKTAEATYACERILGNRFHKFERAQLGTLCCEDAEEARTLIPSLANKIDDQNL 120 YFNVFARFKTAEATYACERILGNRFHKFERAQLGTLCCEDAEEARTLIPSLANKIDDQNL Sbjct: 61 YFNVFARFKTAEATYACERILGNRFHKFERAQLGTLCCEDAEEARTLIPSLANKIDDQNL 120 Query: 121 QGILDELSTLRKFQD 135 QGILDELSTLRKFQD Sbjct: 121 QGILDELSTLRKFQD 135 >5XOG-D nrPDB Length = 186 Score = 90.9 bits (224), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 65/161 (40%), Positives = 84/161 (52%), Gaps = 38/161 (23%) Query: 7 EEDAAQLKLGPEFE--------NED---MLTVSEAKILIETVLAQRARETNGEIPM---- 51 EE+A L+LGPEF NE L++SE+++LI L R+R NG + + Sbjct: 22 EENATLLRLGPEFALKQYDHDGNEHDLIALSLSESRLLIREALKARSRARNGGVDIESSN 81 Query: 52 -----------------TDVMKKTVAYFNVFARFKTAEATYACERILGNR-----FHKFE 89 V+KKT+ Y N FARFK E A +++L N H FE Sbjct: 82 GEIDDDELAKVTSGAVANGVVKKTLDYLNTFARFKDEETCTAVDQLLHNSSDCSVLHPFE 141 Query: 90 RAQLGTLCCEDAEEARTLIPSLANKIDDQNLQGILDELSTL 130 AQL +L CED +EA TLIPSLA K + NLQ ILDEL+ L Sbjct: 142 IAQLSSLGCEDVDEAITLIPSLAAK-KEVNLQRILDELNRL 181 >5IY7-D nrPDB Length = 142 Score = 87.8 bits (216), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 59/136 (43%), Positives = 78/136 (57%), Gaps = 5/136 (3%) Query: 2 PRA-IFEEDAAQLKLGPEFENEDMLTVSEAKILIETVLAQRARETNGEIPMTDVMKKTVA 60 PRA EEDA+QL EFE + L SE +L+E Q+ E +++V KT+ Sbjct: 8 PRAGDVEEDASQLIFPKEFETAETLLNSEVHMLLEHR-KQQNESAEDEQELSEVFMKTLN 66 Query: 61 YFNVFARFKTAEATYACER--ILGNRFHKFERAQLGTLCCEDAEEARTLIPSLANKIDDQ 118 Y F+RFK E T A R +L + HKFE A L LC E AEE++ LIPSL + +D+ Sbjct: 67 YTARFSRFKNRE-TIASVRSLLLQKKLHKFELACLANLCPETAEESKALIPSLEGRFEDE 125 Query: 119 NLQGILDELSTLRKFQ 134 LQ ILD++ T R FQ Sbjct: 126 ELQQILDDIQTKRSFQ 141 >1WCM-D nrPDB Length = 177 Score = 83.6 bits (205), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 60/156 (38%), Positives = 83/156 (53%), Gaps = 32/156 (20%) Query: 7 EEDAAQLKLGPEF---------ENEDM--LTVSEAKILIETVLAQRAR--------ETNG 47 EE+AA L+LG EF E E++ L +SEA+++I+ L +R R Sbjct: 18 EENAATLQLGQEFQLKQINHQGEEEELIALNLSEARLVIKEALVERRRAFKRSQKKTREK 77 Query: 48 EIPMTDVM------------KKTVAYFNVFARFKTAEATYACERILGNR-FHKFERAQLG 94 E+ DV+ K T+ Y F+RF+ E A ++L + H FE AQLG Sbjct: 78 ELESIDVLLEQTTGGNNKDLKNTMQYLTNFSRFRDQETVGAVIQLLKSTGLHPFEVAQLG 137 Query: 95 TLCCEDAEEARTLIPSLANKIDDQNLQGILDELSTL 130 +L C+ A+EA+TLIPSL NKI D L+ IL ELS L Sbjct: 138 SLACDTADEAKTLIPSLNNKISDDELERILKELSNL 173 >4BY1-D nrPDB Length = 221 Score = 72.8 bits (177), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 38/77 (49%), Positives = 50/77 (64%), Gaps = 1/77 (1%) Query: 55 MKKTVAYFNVFARFKTAEATYACERILGNR-FHKFERAQLGTLCCEDAEEARTLIPSLAN 113 +K T+ Y F+RF+ E A ++L + H FE AQLG+L C+ A+EA+TLIPSL N Sbjct: 141 LKNTMQYLTNFSRFRDQETVGAVIQLLKSTGLHPFEVAQLGSLACDTADEAKTLIPSLNN 200 Query: 114 KIDDQNLQGILDELSTL 130 KI D L+ IL ELS L Sbjct: 201 KISDDELERILKELSNL 217 Score = 28.5 bits (62), Expect = 0.82, Method: Compositional matrix adjust. Identities = 19/48 (39%), Positives = 29/48 (60%), Gaps = 11/48 (22%) Query: 7 EEDAAQLKLGPEF---------ENEDM--LTVSEAKILIETVLAQRAR 43 EE+AA L+LG EF E E++ L +SEA+++I+ L +R R Sbjct: 21 EENAATLQLGQEFQLKQINHQGEEEELIALNLSEARLVIKEALVERRR 68 >1PQV-D nrPDB Length = 221 Score = 72.8 bits (177), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 38/77 (49%), Positives = 50/77 (64%), Gaps = 1/77 (1%) Query: 55 MKKTVAYFNVFARFKTAEATYACERILGNR-FHKFERAQLGTLCCEDAEEARTLIPSLAN 113 +K T+ Y F+RF+ E A ++L + H FE AQLG+L C+ A+EA+TLIPSL N Sbjct: 141 LKNTMQYLTNFSRFRDQETVGAVIQLLKSTGLHPFEVAQLGSLACDTADEAKTLIPSLNN 200 Query: 114 KIDDQNLQGILDELSTL 130 KI D L+ IL ELS L Sbjct: 201 KISDDELERILKELSNL 217 Score = 28.5 bits (62), Expect = 0.85, Method: Compositional matrix adjust. Identities = 19/48 (39%), Positives = 29/48 (60%), Gaps = 11/48 (22%) Query: 7 EEDAAQLKLGPEF---------ENEDM--LTVSEAKILIETVLAQRAR 43 EE+AA L+LG EF E E++ L +SEA+++I+ L +R R Sbjct: 21 EENAATLQLGQEFQLKQINHQGEEEELIALNLSEARLVIKEALVERRR 68 >1Y14-A nrPDB Length = 187 Score = 72.8 bits (177), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 38/77 (49%), Positives = 50/77 (64%), Gaps = 1/77 (1%) Query: 55 MKKTVAYFNVFARFKTAEATYACERILGNR-FHKFERAQLGTLCCEDAEEARTLIPSLAN 113 +K T+ Y F+RF+ E A ++L + H FE AQLG+L C+ A+EA+TLIPSL N Sbjct: 107 LKNTMQYLTNFSRFRDQETVGAVIQLLKSTGLHPFEVAQLGSLACDTADEAKTLIPSLNN 166 Query: 114 KIDDQNLQGILDELSTL 130 KI D L+ IL ELS L Sbjct: 167 KISDDELERILKELSNL 183 >4OH0-A nrPDB Length = 280 Score = 27.3 bits (59), Expect = 2.0, Method: Compositional matrix adjust. Identities = 14/34 (41%), Positives = 21/34 (61%), Gaps = 2/34 (5%) Query: 97 CCEDA-EEART-LIPSLANKIDDQNLQGILDELS 128 C E + A+T IP + N I DQN+Q + +E+S Sbjct: 19 CAEHSMSRAKTSTIPQVNNSIIDQNVQALFNEIS 52 >5HM3-A nrPDB Length = 657 Score = 26.9 bits (58), Expect = 2.8, Method: Composition-based stats. Identities = 10/29 (34%), Positives = 18/29 (62%) Query: 1 MPRAIFEEDAAQLKLGPEFENEDMLTVSE 29 +P+ +F++ A LK PE +E ++ V E Sbjct: 553 LPQTVFDDSHAGLKFDPEDTSEQLVIVGE 581 >5IV5-U nrPDB Length = 364 Score = 26.2 bits (56), Expect = 4.0, Method: Compositional matrix adjust. Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 1/57 (1%) Query: 61 YFNVFARFKTAEATYACERILGNRFHKFERAQLGTLCCEDAEEARTLIPSLANKIDD 117 YFN F+ +T ++ YA E I G + + L EDA + +TL + + + + Sbjct: 228 YFNYFSYGETGKSQYAAE-IKGYLDDWYRSTLIEPLSPEDAAKNKTLFEKMTSSLTN 283 >1QSA-A nrPDB Length = 618 Score = 25.8 bits (55), Expect = 5.8, Method: Composition-based stats. Identities = 12/29 (41%), Positives = 20/29 (68%), Gaps = 2/29 (6%) Query: 99 EDAEEARTLIPSL--ANKIDDQNLQGILD 125 +DAE AR +IPSL A ++++ +Q + D Sbjct: 228 QDAENARLMIPSLAQAQQLNEDQIQELRD 256 >5XF9-A nrPDB Length = 591 Score = 25.0 bits (53), Expect = 9.2, Method: Composition-based stats. Identities = 15/40 (37%), Positives = 20/40 (50%) Query: 38 LAQRARETNGEIPMTDVMKKTVAYFNVFARFKTAEATYAC 77 LA A NG + + DV + VA + FARF E+ C Sbjct: 443 LAFEALPCNGTVMVFDVRRDPVAIVHHFARFFAHESCGFC 482 >2PMZ-F nrPDB Length = 113 Score = 25.0 bits (53), Expect = 9.7, Method: Compositional matrix adjust. Identities = 18/83 (21%), Positives = 40/83 (48%), Gaps = 4/83 (4%) Query: 52 TDVMKKTVAYFNVFARFKTAEATYACERILGNRFHKFERAQLGTLCCEDAEEARTLIPSL 111 ++++++T Y N + A E + + RA L ++C ++E R+++ Sbjct: 31 SNLLQRTYDYLNSVEKCDAESAQKVIEELSNIVSREDVRAILASICPTTSDEVRSILVMD 90 Query: 112 ANKI-DDQNLQGILDELSTLRKF 133 NK +++Q I+D +RK+ Sbjct: 91 TNKTYTSEDIQKIID---IIRKY 110 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 3H0G-D nrPDB 198 8e-52 5IY7-D nrPDB 151 1e-37 5XOG-D nrPDB 140 1e-34 1WCM-D nrPDB 128 8e-31 4BY1-D nrPDB 113 3e-26 1PQV-D nrPDB 112 5e-26 1Y14-A nrPDB 109 6e-25 Sequences not found previously or not previously below threshold: 2PMZ-F nrPDB 37 0.003 1QSA-A nrPDB 28 1.1 1CII-A nrPDB 27 3.0 3HV0-A nrPDB 27 3.3 4OH0-A nrPDB 27 3.5 6IBP-A nrPDB 26 3.9 3K9D-A nrPDB 26 4.9 3I47-A nrPDB 26 6.4 CONVERGED! >3H0G-D nrPDB Length = 135 Score = 198 bits (502), Expect = 8e-52, Method: Composition-based stats. Identities = 135/135 (100%), Positives = 135/135 (100%) Query: 1 MPRAIFEEDAAQLKLGPEFENEDMLTVSEAKILIETVLAQRARETNGEIPMTDVMKKTVA 60 MPRAIFEEDAAQLKLGPEFENEDMLTVSEAKILIETVLAQRARETNGEIPMTDVMKKTVA Sbjct: 1 MPRAIFEEDAAQLKLGPEFENEDMLTVSEAKILIETVLAQRARETNGEIPMTDVMKKTVA 60 Query: 61 YFNVFARFKTAEATYACERILGNRFHKFERAQLGTLCCEDAEEARTLIPSLANKIDDQNL 120 YFNVFARFKTAEATYACERILGNRFHKFERAQLGTLCCEDAEEARTLIPSLANKIDDQNL Sbjct: 61 YFNVFARFKTAEATYACERILGNRFHKFERAQLGTLCCEDAEEARTLIPSLANKIDDQNL 120 Query: 121 QGILDELSTLRKFQD 135 QGILDELSTLRKFQD Sbjct: 121 QGILDELSTLRKFQD 135 >5IY7-D nrPDB Length = 142 Score = 151 bits (381), Expect = 1e-37, Method: Composition-based stats. Identities = 56/135 (41%), Positives = 76/135 (56%), Gaps = 3/135 (2%) Query: 2 PRA-IFEEDAAQLKLGPEFENEDMLTVSEAKILIETVLAQRARETNGEIPMTDVMKKTVA 60 PRA EEDA+QL EFE + L SE +L+E Q+ E +++V KT+ Sbjct: 8 PRAGDVEEDASQLIFPKEFETAETLLNSEVHMLLEHR-KQQNESAEDEQELSEVFMKTLN 66 Query: 61 YFNVFARFKTAEATYACERIL-GNRFHKFERAQLGTLCCEDAEEARTLIPSLANKIDDQN 119 Y F+RFK E + +L + HKFE A L LC E AEE++ LIPSL + +D+ Sbjct: 67 YTARFSRFKNRETIASVRSLLLQKKLHKFELACLANLCPETAEESKALIPSLEGRFEDEE 126 Query: 120 LQGILDELSTLRKFQ 134 LQ ILD++ T R FQ Sbjct: 127 LQQILDDIQTKRSFQ 141 >5XOG-D nrPDB Length = 186 Score = 140 bits (353), Expect = 1e-34, Method: Composition-based stats. Identities = 65/165 (39%), Positives = 85/165 (51%), Gaps = 38/165 (23%) Query: 3 RAIFEEDAAQLKLGPEFE--------NED---MLTVSEAKILIETVLAQRARETNGEIPM 51 + EE+A L+LGPEF NE L++SE+++LI L R+R NG + + Sbjct: 18 QVDDEENATLLRLGPEFALKQYDHDGNEHDLIALSLSESRLLIREALKARSRARNGGVDI 77 Query: 52 ---------------------TDVMKKTVAYFNVFARFKTAEATYACERILGNR-----F 85 V+KKT+ Y N FARFK E A +++L N Sbjct: 78 ESSNGEIDDDELAKVTSGAVANGVVKKTLDYLNTFARFKDEETCTAVDQLLHNSSDCSVL 137 Query: 86 HKFERAQLGTLCCEDAEEARTLIPSLANKIDDQNLQGILDELSTL 130 H FE AQL +L CED +EA TLIPSLA K + NLQ ILDEL+ L Sbjct: 138 HPFEIAQLSSLGCEDVDEAITLIPSLAAK-KEVNLQRILDELNRL 181 >1WCM-D nrPDB Length = 177 Score = 128 bits (321), Expect = 8e-31, Method: Composition-based stats. Identities = 60/165 (36%), Positives = 85/165 (51%), Gaps = 32/165 (19%) Query: 1 MPRAIFEEDAAQLKLGPEF---------ENEDM--LTVSEAKILIETVLAQRAR------ 43 + + EE+AA L+LG EF E E++ L +SEA+++I+ L +R R Sbjct: 12 LKKVEEEENAATLQLGQEFQLKQINHQGEEEELIALNLSEARLVIKEALVERRRAFKRSQ 71 Query: 44 --ETNGEIPMTDVM------------KKTVAYFNVFARFKTAEATYACERILGNR-FHKF 88 E+ DV+ K T+ Y F+RF+ E A ++L + H F Sbjct: 72 KKTREKELESIDVLLEQTTGGNNKDLKNTMQYLTNFSRFRDQETVGAVIQLLKSTGLHPF 131 Query: 89 ERAQLGTLCCEDAEEARTLIPSLANKIDDQNLQGILDELSTLRKF 133 E AQLG+L C+ A+EA+TLIPSL NKI D L+ IL ELS L Sbjct: 132 EVAQLGSLACDTADEAKTLIPSLNNKISDDELERILKELSNLETL 176 >4BY1-D nrPDB Length = 221 Score = 113 bits (282), Expect = 3e-26, Method: Composition-based stats. Identities = 60/200 (30%), Positives = 83/200 (41%), Gaps = 73/200 (36%) Query: 7 EEDAAQLKLGPEF---------ENEDM--LTVSEAKILIETVLAQRAR------------ 43 EE+AA L+LG EF E E++ L +SEA+++I+ L +R R Sbjct: 21 EENAATLQLGQEFQLKQINHQGEEEELIALNLSEARLVIKEALVERRRAFKRSQKKHKKK 80 Query: 44 -------------------------------------ETNGEIPMTDVM----------- 55 E+ DV+ Sbjct: 81 HLKHENANDETTAVEDEDDDLDEDDVNADDDDFMHSETREKELESIDVLLEQTTGGNNKD 140 Query: 56 -KKTVAYFNVFARFKTAEATYACERILGNR-FHKFERAQLGTLCCEDAEEARTLIPSLAN 113 K T+ Y F+RF+ E A ++L + H FE AQLG+L C+ A+EA+TLIPSL N Sbjct: 141 LKNTMQYLTNFSRFRDQETVGAVIQLLKSTGLHPFEVAQLGSLACDTADEAKTLIPSLNN 200 Query: 114 KIDDQNLQGILDELSTLRKF 133 KI D L+ IL ELS L Sbjct: 201 KISDDELERILKELSNLETL 220 >1PQV-D nrPDB Length = 221 Score = 112 bits (280), Expect = 5e-26, Method: Composition-based stats. Identities = 60/206 (29%), Positives = 85/206 (41%), Gaps = 73/206 (35%) Query: 1 MPRAIFEEDAAQLKLGPEF---------ENEDM--LTVSEAKILIETVLAQRAR------ 43 + + EE+AA L+LG EF E E++ L +SEA+++I+ L +R R Sbjct: 15 LKKVEEEENAATLQLGQEFQLKQINHQGEEEELIALNLSEARLVIKEALVERRRAFKRSQ 74 Query: 44 -------------------------------------------ETNGEIPMTDVM----- 55 E+ DV+ Sbjct: 75 KKHKKKHLKHEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHSETREKELESIDVLLEQTT 134 Query: 56 -------KKTVAYFNVFARFKTAEATYACERILGNR-FHKFERAQLGTLCCEDAEEARTL 107 K T+ Y F+RF+ E A ++L + H FE AQLG+L C+ A+EA+TL Sbjct: 135 GGNNKDLKNTMQYLTNFSRFRDQETVGAVIQLLKSTGLHPFEVAQLGSLACDTADEAKTL 194 Query: 108 IPSLANKIDDQNLQGILDELSTLRKF 133 IPSL NKI D L+ IL ELS L Sbjct: 195 IPSLNNKISDDELERILKELSNLETL 220 >1Y14-A nrPDB Length = 187 Score = 109 bits (271), Expect = 6e-25, Method: Composition-based stats. Identities = 41/105 (39%), Positives = 55/105 (52%), Gaps = 13/105 (12%) Query: 42 ARETNGEIPMTDVM------------KKTVAYFNVFARFKTAEATYACERILGNR-FHKF 88 + E+ DV+ K T+ Y F+RF+ E A ++L + H F Sbjct: 82 SETREKELESIDVLLEQTTGGNNKDLKNTMQYLTNFSRFRDQETVGAVIQLLKSTGLHPF 141 Query: 89 ERAQLGTLCCEDAEEARTLIPSLANKIDDQNLQGILDELSTLRKF 133 E AQLG+L C+ A+EA+TLIPSL NKI D L+ IL ELS L Sbjct: 142 EVAQLGSLACDTADEAKTLIPSLNNKISDDELERILKELSNLETL 186 >2PMZ-F nrPDB Length = 113 Score = 36.6 bits (83), Expect = 0.003, Method: Composition-based stats. Identities = 23/107 (21%), Positives = 47/107 (43%), Gaps = 11/107 (10%) Query: 21 NEDMLTVSEAKILIETVLAQRARETNGEIPMTDVMKKTVAYFNVFARFKTAEATYACERI 80 E + S AK L+ V+ +G ++++++T Y N + AE+ Sbjct: 8 EEHYIPYSVAKKLLTDVI------RSGG--SSNLLQRTYDYLNSVEKC-DAESAQKVIEE 58 Query: 81 LGNRFHKFER-AQLGTLCCEDAEEART-LIPSLANKIDDQNLQGILD 125 L N + + A L ++C ++E R+ L+ +++Q I+D Sbjct: 59 LSNIVSREDVRAILASICPTTSDEVRSILVMDTNKTYTSEDIQKIID 105 >1QSA-A nrPDB Length = 618 Score = 28.2 bits (61), Expect = 1.1, Method: Composition-based stats. Identities = 12/35 (34%), Positives = 22/35 (62%), Gaps = 2/35 (5%) Query: 93 LGTLCCEDAEEARTLIPSL--ANKIDDQNLQGILD 125 ++ +DAE AR +IPSL A ++++ +Q + D Sbjct: 222 FASVARQDAENARLMIPSLAQAQQLNEDQIQELRD 256 >1CII-A nrPDB Length = 602 Score = 26.6 bits (57), Expect = 3.0, Method: Composition-based stats. Identities = 24/91 (26%), Positives = 35/91 (38%), Gaps = 18/91 (19%) Query: 19 FENEDMLTVS--EAKILIETVLAQRARETNGEIPMTDVMKKTVAYFNVFARFKTAEATYA 76 F + D L +S EA+ LIE ++ N + KK + R K Sbjct: 144 FADADSLRISPREARSLIEQAEKRQKDAQNAD-------KKAADMLAEYERRKG------ 190 Query: 77 CERILGNRFHKFERAQLGTLCCEDAEEARTL 107 IL R + E+ L DA++AR L Sbjct: 191 ---ILDTRLSELEKNGGAALAVLDAQQARLL 218 >3HV0-A nrPDB Length = 393 Score = 26.6 bits (57), Expect = 3.3, Method: Composition-based stats. Identities = 15/66 (22%), Positives = 32/66 (48%), Gaps = 5/66 (7%) Query: 3 RAIFEEDAAQLKLGPEFENEDMLTVSEAKILIETVLA-QRARETNGEIPMTDVMKKTVAY 61 R + E+D ++G ++ + +ML+ IL++ ++ + + N E DV+ K Sbjct: 321 RFLMEDDEKLEEIGKKYSSGEMLSGEIKSILVQELVKLTKNHQKNREAINDDVIAK---- 376 Query: 62 FNVFAR 67 F +R Sbjct: 377 FTNKSR 382 >4OH0-A nrPDB Length = 280 Score = 26.6 bits (57), Expect = 3.5, Method: Composition-based stats. Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 1/37 (2%) Query: 93 LGTLCCEDAEEART-LIPSLANKIDDQNLQGILDELS 128 +G A+T IP + N I DQN+Q + +E+S Sbjct: 16 IGACAEHSMSRAKTSTIPQVNNSIIDQNVQALFNEIS 52 >6IBP-A nrPDB Length = 420 Score = 26.2 bits (56), Expect = 3.9, Method: Composition-based stats. Identities = 19/77 (24%), Positives = 34/77 (44%), Gaps = 10/77 (12%) Query: 2 PRAIFEEDAAQLKLGPEFENE--------DMLTVSEAKILIETVLAQRARETNGEIPMTD 53 P FEEDA ++ F + +L++ LI + +R + +I + Sbjct: 186 PDERFEEDALRMLRAIRFSGQLDFIIDMKTLLSIRRHARLIRFIAVERLKSEIDKIFVNP 245 Query: 54 VMKKTVAYF--NVFARF 68 M+K++AY +V RF Sbjct: 246 SMQKSMAYLKDSVLTRF 262 >3K9D-A nrPDB Length = 464 Score = 26.2 bits (56), Expect = 4.9, Method: Composition-based stats. Identities = 9/42 (21%), Positives = 19/42 (45%) Query: 19 FENEDMLTVSEAKILIETVLAQRARETNGEIPMTDVMKKTVA 60 E++D+ ++ E + LIE+ + D + K +A Sbjct: 3 LEDKDLRSIQEVRNLIESANKAQKELAAMSQQQIDTIVKAIA 44 >3I47-A nrPDB Length = 268 Score = 25.9 bits (55), Expect = 6.4, Method: Composition-based stats. Identities = 15/85 (17%), Positives = 28/85 (32%), Gaps = 7/85 (8%) Query: 51 MTDVMKKTVAYFNVFARFKTAEATYACERILGNRFHKFERAQLGTLCCEDAEEARTLIPS 110 +V T AY + + +L +Q+ E + ++ L Sbjct: 165 SAEVFDATRAYSLNLV-----QHCVPDDTLLEFTLK--YASQISNNAPEAVKNSKQLAQY 217 Query: 111 LANKIDDQNLQGILDELSTLRKFQD 135 +ANK D+ L L ++ D Sbjct: 218 VANKKIDEELVRYTASLIAHKRVSD 242 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.303 0.128 0.313 Lambda K H 0.267 0.0396 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 4,074,144 Number of Sequences: 36641 Number of extensions: 120253 Number of successful extensions: 379 Number of sequences better than 10.0: 18 Number of HSP's better than 10.0 without gapping: 23 Number of HSP's successfully gapped in prelim test: 12 Number of HSP's that attempted gapping in prelim test: 330 Number of HSP's gapped (non-prelim): 40 length of query: 135 length of database: 10,336,785 effective HSP length: 87 effective length of query: 48 effective length of database: 7,149,018 effective search space: 343152864 effective search space used: 343152864 T: 11 A: 40 X1: 16 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.9 bits) S2: 53 (25.1 bits)