BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= O74499 (113 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 3SWN-C nrPDB 226 1e-60 6QX9-67 nrPDB 116 2e-27 6ASO-G nrPDB 94 1e-20 6AH0-d nrPDB 55 6e-09 3JB9-J nrPDB 52 5e-08 5LJ3-g nrPDB 49 6e-07 1JBM-A nrPDB 48 1e-06 1TH7-A nrPDB 47 1e-06 6AH0-z nrPDB 47 1e-06 3PGG-A nrPDB 47 2e-06 6ASO-C nrPDB 47 2e-06 4M75-A nrPDB 46 4e-06 4C8Q-A nrPDB 45 5e-06 3JCR-3 nrPDB 43 3e-05 4EMG-A nrPDB 42 4e-05 4M75-G nrPDB 42 5e-05 1I8F-A nrPDB 42 7e-05 5ZWM-s nrPDB 41 1e-04 4C8Q-D nrPDB 40 2e-04 6QX9-1b nrPDB 40 2e-04 6ASO-D nrPDB 40 2e-04 6AH0-t nrPDB 39 4e-04 4M77-E nrPDB 39 5e-04 3JB9-E nrPDB 39 7e-04 6QW6-4e nrPDB 35 0.008 6QDV-e nrPDB 34 0.011 5GMK-i nrPDB 34 0.012 1LJO-A nrPDB 34 0.014 3JB9-H nrPDB 31 0.11 4EMK-A nrPDB 31 0.14 3SWN-A nrPDB 30 0.19 5LQW-b nrPDB 30 0.20 3V4O-A nrPDB 29 0.39 3SWN-B nrPDB 29 0.54 5MQF-a nrPDB 28 1.0 6J6Q-g nrPDB 28 1.1 3OPO-A nrPDB 27 1.5 4C8Q-B nrPDB 27 1.7 5VSU-B nrPDB 27 1.8 5GM6-g nrPDB 27 1.8 4N0A-C nrPDB 27 1.8 4MJ1-A nrPDB 27 2.2 6GG0-1 nrPDB 27 2.3 3T51-B nrPDB 27 2.3 3JB9-G nrPDB 26 3.2 4WZJ-C nrPDB 26 4.4 6FES-A nrPDB 25 5.1 2OKV-A nrPDB 25 6.7 5XJU-A nrPDB 25 7.1 3CQF-A nrPDB 25 9.0 1YII-A nrPDB 25 9.4 2A1X-A nrPDB 25 9.5 >3SWN-C nrPDB Length = 117 Score = 226 bits (577), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 113/113 (100%), Positives = 113/113 (100%) Query: 1 MSSLQKRPGPGNSSQPTERPRKESILDLSRYQDQRIQATFTGGRQITGILKGFDQLMNLV 60 MSSLQKRPGPGNSSQPTERPRKESILDLSRYQDQRIQATFTGGRQITGILKGFDQLMNLV Sbjct: 5 MSSLQKRPGPGNSSQPTERPRKESILDLSRYQDQRIQATFTGGRQITGILKGFDQLMNLV 64 Query: 61 LDDVEEQLRNPEDGKLTGAIRKLGLVVVRGTTLVLIAPMDGSEEIPNPFVQAE 113 LDDVEEQLRNPEDGKLTGAIRKLGLVVVRGTTLVLIAPMDGSEEIPNPFVQAE Sbjct: 65 LDDVEEQLRNPEDGKLTGAIRKLGLVVVRGTTLVLIAPMDGSEEIPNPFVQAE 117 >6QX9-67 nrPDB Length = 103 Score = 116 bits (290), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 58/97 (59%), Positives = 74/97 (76%), Gaps = 1/97 (1%) Query: 18 ERPRKESILDLSRYQDQRIQATFTGGRQITGILKGFDQLMNLVLDDVEEQLRNPED-GKL 76 E+ +KESILDLS+Y D+ I+ F GGR+ +GILKGFD L+NLVLD E +R+P+D KL Sbjct: 5 EKKKKESILDLSKYIDKTIRVKFQGGREASGILKGFDPLLNLVLDGTIEYMRDPDDQYKL 64 Query: 77 TGAIRKLGLVVVRGTTLVLIAPMDGSEEIPNPFVQAE 113 T R+LGLVV RGT++VLI P DG E IPNPF+Q + Sbjct: 65 TEDTRQLGLVVCRGTSVVLICPQDGMEAIPNPFIQQQ 101 >6ASO-G nrPDB Length = 115 Score = 94.4 bits (233), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 46/98 (46%), Positives = 66/98 (67%), Gaps = 4/98 (4%) Query: 10 PGNSSQPTERPRKESILDLSRYQDQRIQATFTGGRQITGILKGFDQLMNLVLDDVEEQLR 69 P + E P++E+ILDL++Y+D +I+ GG+ + G+LKG+DQLMNLVLDD E + Sbjct: 12 PQQQRKKFEGPKREAILDLAKYKDSKIRVKLMGGKLVIGVLKGYDQLMNLVLDDTVEYMS 71 Query: 70 NPEDGKLTGAI----RKLGLVVVRGTTLVLIAPMDGSE 103 NP+D T I RKLGL V+RGT LV ++ +GS+ Sbjct: 72 NPDDENNTELISKNARKLGLTVIRGTILVSLSSAEGSD 109 >6AH0-d nrPDB Length = 76 Score = 55.1 bits (131), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 23/74 (31%), Positives = 44/74 (59%), Gaps = 7/74 (9%) Query: 27 DLSRYQDQRIQATFTGGRQITGILKGFDQLMNLVLDDVEEQLRNPEDGKLTGAIRKLGLV 86 +L ++ D+++ GGR + GIL+GFD MNLV+D+ E +G +G+V Sbjct: 8 ELKKFMDKKLSLKLNGGRHVQGILRGFDPFMNLVIDECVEM-------ATSGQQNNIGMV 60 Query: 87 VVRGTTLVLIAPMD 100 V+RG +++++ ++ Sbjct: 61 VIRGNSIIMLEALE 74 >3JB9-J nrPDB Length = 77 Score = 52.0 bits (123), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 24/74 (32%), Positives = 45/74 (60%), Gaps = 7/74 (9%) Query: 27 DLSRYQDQRIQATFTGGRQITGILKGFDQLMNLVLDDVEEQLRNPEDGKLTGAIRKLGLV 86 DL +Y D+++ G R++ G+L+G+D +N+VL+D E+ K+ G K+G V Sbjct: 8 DLKKYLDRQVFVQLNGSRKVYGVLRGYDIFLNIVLEDSIEE-------KVDGEKVKIGSV 60 Query: 87 VVRGTTLVLIAPMD 100 +RG ++++I +D Sbjct: 61 AIRGNSVIMIETLD 74 >5LJ3-g nrPDB Length = 77 Score = 48.5 bits (114), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 6/76 (7%) Query: 27 DLSRYQDQRIQATFTGGRQITGILKGFDQLMNLVLDDVEEQLRNPEDGKLTGAIRKLGL- 85 +L +Y D++I G R++ GIL+G+D +N+VLDD E N ED +LGL Sbjct: 6 ELKKYMDKKILLNINGSRKVAGILRGYDIFLNVVLDDAMEI--NGED---PANNHQLGLQ 60 Query: 86 VVVRGTTLVLIAPMDG 101 V+RG +++ + +D Sbjct: 61 TVIRGNSIISLEALDA 76 >1JBM-A nrPDB Length = 86 Score = 47.8 bits (112), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 27/58 (46%), Positives = 37/58 (63%), Gaps = 7/58 (12%) Query: 40 FTGGRQITGILKGFDQLMNLVLDDVEEQLRNPEDGKLTGAIRKLGLVVVRGTTLVLIA 97 G R+ G+LK FD MNLVL+D EE EDG++T R+LG V++RG +V I+ Sbjct: 30 LKGDREFRGVLKSFDLHMNLVLNDAEE----LEDGEVT---RRLGTVLIRGDNIVYIS 80 >1TH7-A nrPDB Length = 81 Score = 47.4 bits (111), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 26/75 (34%), Positives = 44/75 (58%), Gaps = 7/75 (9%) Query: 28 LSRYQDQRIQATFTGGRQITGILKGFDQLMNLVLDDVEEQLRNPEDGKLTGAIRKLGLVV 87 L+ + + G +++ G+L+ +DQ MNLVL D EE +++ GK KLG +V Sbjct: 14 LAESLNNLVLVKLKGNKEVRGMLRSYDQHMNLVLSDSEE-IQSDGSGK------KLGTIV 66 Query: 88 VRGTTLVLIAPMDGS 102 +RG ++LI+P+ S Sbjct: 67 IRGDNVILISPLQTS 81 >6AH0-z nrPDB Length = 96 Score = 47.4 bits (111), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 3/73 (4%) Query: 28 LSRYQDQRIQATFTGGRQITGILKGFDQLMNLVLDDVEEQLRNPEDGKLTGAIRKLGLVV 87 L Y ++ + + GR I G LKGFDQ +NL+LD+ E++ + G LGL + Sbjct: 5 LENYINRTVAVITSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVV---LGLYI 61 Query: 88 VRGTTLVLIAPMD 100 VRG + +I +D Sbjct: 62 VRGDNVAVIGEID 74 >3PGG-A nrPDB Length = 121 Score = 47.0 bits (110), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 26/92 (28%), Positives = 49/92 (53%), Gaps = 4/92 (4%) Query: 10 PGNSSQPTERPRKESILD----LSRYQDQRIQATFTGGRQITGILKGFDQLMNLVLDDVE 65 P N SQ + +I+ + + RI G ++ +G+L+GFD+ +N+VLDDV+ Sbjct: 11 PANKSQGGSNQKGGNIILPLALIDKCIGNRIYVVMKGDKEFSGVLRGFDEYVNMVLDDVQ 70 Query: 66 EQLRNPEDGKLTGAIRKLGLVVVRGTTLVLIA 97 E ++ ++G +KL V+V +L++ Sbjct: 71 EYGFKADEEDISGGNKKLKRVMVNRLETILLS 102 >6ASO-C nrPDB Length = 97 Score = 46.6 bits (109), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 29/88 (32%), Positives = 47/88 (53%), Gaps = 5/88 (5%) Query: 23 ESILDLSRYQ-DQRIQATFTGGRQITGILKGFDQLMNLVLDDVEEQLRNPEDGKLTGAIR 81 E+ LDL + D+R+ G R + G L+ FD N+VL D E + + +L+ + R Sbjct: 2 ETPLDLLKLNLDERVYIKLRGARTLVGTLQAFDSHCNIVLSDAVETIYQLNNEELSESER 61 Query: 82 KLGLVVVRGTTLVLIAP----MDGSEEI 105 + +V +RG T+ LI+ DG+ EI Sbjct: 62 RCEMVFIRGDTVTLISTPSEDDDGAVEI 89 >4M75-A nrPDB Length = 144 Score = 45.8 bits (107), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 23/72 (31%), Positives = 40/72 (55%), Gaps = 2/72 (2%) Query: 33 DQRIQATFTGGRQITGILKGFDQLMNLVLDDVEEQLRNPEDGKLTGAIRKLGLVVVRGTT 92 D++I GR + G+L+ FDQ NL+L D E++ E+ K R G+ ++RG Sbjct: 23 DRKIFVLLRDGRMLFGVLRTFDQYANLILQDCVERIYFSEENKYAEEDR--GIFMIRGEN 80 Query: 93 LVLIAPMDGSEE 104 +V++ +D +E Sbjct: 81 VVMLGEVDIDKE 92 >4C8Q-A nrPDB Length = 101 Score = 45.4 bits (106), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 23/72 (31%), Positives = 40/72 (55%), Gaps = 2/72 (2%) Query: 33 DQRIQATFTGGRQITGILKGFDQLMNLVLDDVEEQLRNPEDGKLTGAIRKLGLVVVRGTT 92 D++I GR + G+L+ FDQ NL+L D E++ E+ K R G+ ++RG Sbjct: 7 DRKIFVLLRDGRMLFGVLRTFDQYANLILQDCVERIYFSEENKYAEEDR--GIFMIRGEN 64 Query: 93 LVLIAPMDGSEE 104 +V++ +D +E Sbjct: 65 VVMLGEVDIDKE 76 >3JCR-3 nrPDB Length = 102 Score = 42.7 bits (99), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 28/80 (35%), Positives = 42/80 (52%), Gaps = 7/80 (8%) Query: 26 LDLSRYQ-DQRIQATFTGGRQITGILKGFDQLMNLVLDDVEEQLRNPEDGKLT------G 78 LDL R D+RI R++ G L +DQ +N++L DVEE + E + T Sbjct: 18 LDLIRLSLDERIYVKMRNDRELRGRLHAYDQHLNMILGDVEETVTTIEIDEETYEEIYKS 77 Query: 79 AIRKLGLVVVRGTTLVLIAP 98 R + ++ VRG +VL+AP Sbjct: 78 TKRNIPMLFVRGDGVVLVAP 97 >4EMG-A nrPDB Length = 93 Score = 42.4 bits (98), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 31/93 (33%), Positives = 47/93 (50%), Gaps = 12/93 (12%) Query: 13 SSQPTERPRKESILDLSRYQ-DQRIQATFTGGRQITGILKGFDQLMNLVLDDVEEQLRNP 71 S+Q P LDL R D+ + G R++ G L +D+ +N+VL D EE + Sbjct: 3 SAQAVAEP-----LDLVRLSLDEIVYVKLRGDRELNGRLHAYDEHLNMVLGDAEEIVTIF 57 Query: 72 ED-----GKLTGAIRK-LGLVVVRGTTLVLIAP 98 +D K IRK ++ VRG +++LIAP Sbjct: 58 DDEETDKDKALKTIRKHYEMLFVRGDSVILIAP 90 >4M75-G nrPDB Length = 122 Score = 42.4 bits (98), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 32/103 (31%), Positives = 45/103 (43%), Gaps = 8/103 (7%) Query: 2 SSLQKRPGPGNSSQPTERPRKESILDLSRYQDQRIQATFTGGRQITGILKGFDQLMNLVL 61 +SL K+ G Q + P + L+ + Q++Q G I GIL D MNL L Sbjct: 14 TSLYKKAGENLYFQGSMLP----LYLLTNAKGQQMQIELKNGEIIQGILTNVDNWMNLTL 69 Query: 62 DDV----EEQLRNPEDGKLTGAIRKLGLVVVRGTTLVLIAPMD 100 +V EE N ED + KL + +RGT + I D Sbjct: 70 SNVTEYSEESAINSEDNAESSKAVKLNEIYIRGTFIKFIKLQD 112 >1I8F-A nrPDB Length = 81 Score = 42.0 bits (97), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 23/58 (39%), Positives = 35/58 (60%), Gaps = 8/58 (13%) Query: 44 RQITGILKGFDQLMNLVLDDVEEQLRNPEDGKLTGAIRKLGLVVVRGTTLVLIAPMDG 101 +I GIL+ FDQ +NL+L+D EE + G + K G +VVRG ++ I+P+ G Sbjct: 32 HEIRGILRSFDQHVNLLLEDAEE--------IIDGNVYKRGTMVVRGENVLFISPVPG 81 >5ZWM-s nrPDB Length = 187 Score = 40.8 bits (94), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 26/78 (33%), Positives = 35/78 (44%), Gaps = 4/78 (5%) Query: 28 LSRYQDQRIQATFTGGRQITGILKGFDQLMNLVLDDV----EEQLRNPEDGKLTGAIRKL 83 L+ + Q++Q G I GIL D MNL L +V EE N ED + KL Sbjct: 7 LTNAKGQQMQIELKNGEIIQGILTNVDNWMNLTLSNVTEYSEESAINSEDNAESSKAVKL 66 Query: 84 GLVVVRGTTLVLIAPMDG 101 + +RGT + I D Sbjct: 67 NEIYIRGTFIKFIKLQDN 84 >4C8Q-D nrPDB Length = 114 Score = 40.4 bits (93), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 26/78 (33%), Positives = 35/78 (44%), Gaps = 4/78 (5%) Query: 28 LSRYQDQRIQATFTGGRQITGILKGFDQLMNLVLDDV----EEQLRNPEDGKLTGAIRKL 83 L+ + Q++Q G I GIL D MNL L +V EE N ED + KL Sbjct: 7 LTNAKGQQMQIELKNGEIIQGILTNVDNWMNLTLSNVTEYSEESAINSEDNAESSKAVKL 66 Query: 84 GLVVVRGTTLVLIAPMDG 101 + +RGT + I D Sbjct: 67 NEIYIRGTFIKFIKLQDN 84 >6QX9-1b nrPDB Length = 240 Score = 40.4 bits (93), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 3/68 (4%) Query: 30 RYQDQRIQATFTGGRQITGILKGFDQLMNLVLDDVEEQLR-NPEDGKLT--GAIRKLGLV 86 ++ D R++ GR G K FD+ MNL+L D +E + P++ K R LGLV Sbjct: 11 QHIDYRMRCILQDGRIFIGTFKAFDKHMNLILCDCDEFRKIKPKNSKQAEREEKRVLGLV 70 Query: 87 VVRGTTLV 94 ++RG LV Sbjct: 71 LLRGENLV 78 >6ASO-D nrPDB Length = 93 Score = 40.0 bits (92), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 26/78 (33%), Positives = 35/78 (44%), Gaps = 4/78 (5%) Query: 28 LSRYQDQRIQATFTGGRQITGILKGFDQLMNLVLDDV----EEQLRNPEDGKLTGAIRKL 83 L+ + Q++Q G I GIL D MNL L +V EE N ED + KL Sbjct: 7 LTNAKGQQMQIELKNGEIIQGILTNVDNWMNLTLSNVTEYSEESAINSEDNAESSKAVKL 66 Query: 84 GLVVVRGTTLVLIAPMDG 101 + +RGT + I D Sbjct: 67 NEIYIRGTFIKFIKLQDN 84 >6AH0-t nrPDB Length = 91 Score = 39.3 bits (90), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 25/87 (28%), Positives = 43/87 (49%), Gaps = 5/87 (5%) Query: 13 SSQPTERPRKESILDL-SRYQDQRIQATFTGGRQITGILKGFDQLMNLVLDDVEEQLRNP 71 ++ T P + L+L + RI ++I G L GFD +N+VL+DV E P Sbjct: 2 AANATTNPSQLLPLELVDKCIGSRIHIVMKSDKEIVGTLLGFDDFVNMVLEDVTEFEITP 61 Query: 72 EDGKLTGAIRKLGLVVVRGTTLVLIAP 98 E ++T KL +++ G + ++ P Sbjct: 62 EGRRIT----KLDQILLNGNNITMLVP 84 >4M77-E nrPDB Length = 93 Score = 38.9 bits (89), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 18/72 (25%), Positives = 38/72 (52%), Gaps = 1/72 (1%) Query: 28 LSRYQDQRIQATFTGGRQITGILKGFDQLMNLVLDDVEEQLRNPED-GKLTGAIRKLGLV 86 + + +Q++ R+ G L GFD +N++L+D E L +PED + ++ G + Sbjct: 12 IDKTINQKVLIVLQSNREFEGTLVGFDDFVNVILEDAVEWLIDPEDESRNEKVMQHHGRM 71 Query: 87 VVRGTTLVLIAP 98 ++ G + ++ P Sbjct: 72 LLSGNNIAILVP 83 >3JB9-E nrPDB Length = 147 Score = 38.5 bits (88), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 27/79 (34%), Positives = 38/79 (48%), Gaps = 9/79 (11%) Query: 33 DQRIQATFTGGRQITGILKGFDQLMNLVLDDVEE----QLRNPEDGKLTGAIRKLGLVVV 88 + + T GR G L FD MNLVL D +E + +N + R LGLV++ Sbjct: 11 NHSLNVTTKDGRTFVGQLLAFDGFMNLVLSDCQEYRHIKKQNVPSNSVYEEKRMLGLVIL 70 Query: 89 RGTTLVLIA-----PMDGS 102 RG +V ++ PMD S Sbjct: 71 RGEFIVSLSVQGPPPMDPS 89 >6QW6-4e nrPDB Length = 92 Score = 34.7 bits (78), Expect = 0.008, Method: Compositional matrix adjust. Identities = 19/52 (36%), Positives = 31/52 (59%), Gaps = 6/52 (11%) Query: 45 QITGILKGFDQLMNLVLDDVEEQLRNPEDGKLTGAIRKLGLVVVRGTTLVLI 96 +I G + GFD+ MNLVLDD E E T + ++LG ++++G + L+ Sbjct: 42 RIEGCIIGFDEYMNLVLDDAE------EIHSKTKSRKQLGRIMLKGDNITLL 87 >6QDV-e nrPDB Length = 81 Score = 34.3 bits (77), Expect = 0.011, Method: Compositional matrix adjust. Identities = 19/52 (36%), Positives = 31/52 (59%), Gaps = 6/52 (11%) Query: 45 QITGILKGFDQLMNLVLDDVEEQLRNPEDGKLTGAIRKLGLVVVRGTTLVLI 96 +I G + GFD+ MNLVLDD E E T + ++LG ++++G + L+ Sbjct: 32 RIEGCIIGFDEYMNLVLDDAE------EIHSKTKSRKQLGRIMLKGDNITLL 77 >5GMK-i nrPDB Length = 94 Score = 34.3 bits (77), Expect = 0.012, Method: Compositional matrix adjust. Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 5/61 (8%) Query: 43 GRQITGILKGFDQLMNLVLDDVEEQLRNPEDGKLTGAIRK---LGLVVVRGTTLVLIAPM 99 G +I G + GFD+ MN+V+D+ E N DGK + K LG ++++G + LI Sbjct: 36 GIRIKGKIVGFDEFMNVVIDEAVEIPVNSADGK--EDVEKGTPLGKILLKGDNITLITSA 93 Query: 100 D 100 D Sbjct: 94 D 94 >1LJO-A nrPDB Length = 77 Score = 34.3 bits (77), Expect = 0.014, Method: Compositional matrix adjust. Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 7/54 (12%) Query: 45 QITGILKGFDQLMNLVLDDVEEQLRNPEDGKLTGAIRKLGLVVVRGTTLVLIAP 98 Q+ G L+G D MNL L N + K +R LG +V+RG +VLI P Sbjct: 28 QLVGKLEGVDDYMNLYLT-------NAMECKGEEKVRSLGEIVLRGNNVVLIQP 74 >3JB9-H nrPDB Length = 84 Score = 31.2 bits (69), Expect = 0.11, Method: Compositional matrix adjust. Identities = 18/56 (32%), Positives = 34/56 (60%), Gaps = 9/56 (16%) Query: 45 QITGILKGFDQLMNLVLDD-VEEQLRNPEDGKLTGAIRKLGLVVVRGTTLVLIAPM 99 ++ G ++GFD+ MN+VLDD V+ +N + R+LG ++++G + LI + Sbjct: 37 RLQGQIRGFDEFMNIVLDDAVQVDAKNNK--------RELGRILLKGDNITLIQAI 84 >4EMK-A nrPDB Length = 94 Score = 30.8 bits (68), Expect = 0.14, Method: Compositional matrix adjust. Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 6/55 (10%) Query: 44 RQITGILKGFDQLMNLVLDDVEEQLRNPEDGKLTGAIRKLGLVVVRGTTLVLIAP 98 R+ G L GFD +N+VL DV E +TG K +++ G + ++ P Sbjct: 41 REFAGTLVGFDDYVNIVLKDVTEY------DTVTGVTEKHSEMLLNGNGMCMLIP 89 >3SWN-A nrPDB Length = 82 Score = 30.4 bits (67), Expect = 0.19, Method: Compositional matrix adjust. Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 6/55 (10%) Query: 44 RQITGILKGFDQLMNLVLDDVEEQLRNPEDGKLTGAIRKLGLVVVRGTTLVLIAP 98 R+ G L GFD +N+VL DV E +TG K +++ G + ++ P Sbjct: 29 REFAGTLVGFDDYVNIVLKDVTEY------DTVTGVTEKHSEMLLNGNGMCMLIP 77 >5LQW-b nrPDB Length = 196 Score = 30.4 bits (67), Expect = 0.20, Method: Compositional matrix adjust. Identities = 27/91 (29%), Positives = 42/91 (46%), Gaps = 19/91 (20%) Query: 33 DQRIQATFTGGRQITGILKGFDQLMNLVLDDVEEQ---------LRNPEDGK------LT 77 D +++ GR G L FD+ MNLVL++ E+ LR +D K + Sbjct: 17 DYKLRVLTQDGRVYIGQLMAFDKHMNLVLNECIEERVPKTQLDKLRPRKDSKDGTTLNIK 76 Query: 78 GAIRKLGLVVVRG----TTLVLIAPMDGSEE 104 R LGL ++RG +T+V P+ +E Sbjct: 77 VEKRVLGLTILRGEQILSTVVEDKPLLSKKE 107 >3V4O-A nrPDB Length = 245 Score = 29.3 bits (64), Expect = 0.39, Method: Compositional matrix adjust. Identities = 24/108 (22%), Positives = 49/108 (45%), Gaps = 13/108 (12%) Query: 8 PGPGNSSQPTERPRKES-----ILDLSRYQDQRIQATFTGGRQITGILKGFDQLMNLVLD 62 PG N Q T++P + I +++ + +++A ++T +L+ D + +LD Sbjct: 2 PGSDNKEQTTDQPLAKDKVALLIGNMNYREHPKLKAPLVDVYELTNLLRQLDFKVVSLLD 61 Query: 63 DVEEQLRNPEDGKLTGAIRKLGLVVVRGTTLVLIAPMDGSEEIPNPFV 110 E ++RN A+ + L++ +G +L G E N F+ Sbjct: 62 LTEYEMRN--------AVDEFLLLLDKGVYGLLYYAGHGYENFGNSFM 101 >3SWN-B nrPDB Length = 77 Score = 28.9 bits (63), Expect = 0.54, Method: Compositional matrix adjust. Identities = 19/73 (26%), Positives = 34/73 (46%), Gaps = 7/73 (9%) Query: 28 LSRYQDQRIQATFTGGRQITGILKGFDQLMNLVLDDVEEQLRNPEDGKLTGAIRKLGLVV 87 L++ +++ + G GIL D MNL L+ EE + +GK T G Sbjct: 11 LNKVIGKKVLIRLSSGVDYKGILSCLDGYMNLALERTEEYV----NGKKTNV---YGDAF 63 Query: 88 VRGTTLVLIAPMD 100 +RG ++ ++ +D Sbjct: 64 IRGNNVLYVSALD 76 >5MQF-a nrPDB Length = 118 Score = 27.7 bits (60), Expect = 1.0, Method: Compositional matrix adjust. Identities = 12/43 (27%), Positives = 25/43 (58%) Query: 24 SILDLSRYQDQRIQATFTGGRQITGILKGFDQLMNLVLDDVEE 66 S+L S + ++ +++ G +K FD+ N+VL++V+E Sbjct: 30 SVLTQSVKNNTQVLINCRNNKKLLGRVKAFDRHCNMVLENVKE 72 >6J6Q-g nrPDB Length = 110 Score = 27.7 bits (60), Expect = 1.1, Method: Compositional matrix adjust. Identities = 12/58 (20%), Positives = 30/58 (51%) Query: 39 TFTGGRQITGILKGFDQLMNLVLDDVEEQLRNPEDGKLTGAIRKLGLVVVRGTTLVLI 96 + +I +K FD+ N+VL++V+E + + R + + +RG +++++ Sbjct: 47 SLRNNHKIIARVKAFDRHCNMVLENVKELWTEKKGKNVINRERFISKLFLRGDSVIVV 104 >3OPO-A nrPDB Length = 413 Score = 27.3 bits (59), Expect = 1.5, Method: Compositional matrix adjust. Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 3/68 (4%) Query: 34 QRIQATFTGGRQITGILKGFD--QLMNLVLDDVEEQLRNPEDGKLTGAI-RKLGLVVVRG 90 Q+IQ FT I G++ FD MN+ D+V +++ + +T AI + +V Sbjct: 202 QKIQTRFTLKAPIDGVITAFDLRAGMNIAKDNVVAKIQGMDPVWVTAAIPESIAWLVKDA 261 Query: 91 TTLVLIAP 98 + L P Sbjct: 262 SQFTLTVP 269 >4C8Q-B nrPDB Length = 105 Score = 27.3 bits (59), Expect = 1.7, Method: Compositional matrix adjust. Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 9/63 (14%) Query: 33 DQRIQATFTGGRQITGILKGFDQLMNLVLDDVE--EQLRNPEDGKLTGAIRKLGLVVVRG 90 DQ + +I G L+ DQ +NL LD++ ++ + P G++R + +RG Sbjct: 22 DQEVVVELKNDIEIKGTLQSVDQFLNLKLDNISCTDEKKYPH----LGSVRN---IFIRG 74 Query: 91 TTL 93 +T+ Sbjct: 75 STV 77 >5VSU-B nrPDB Length = 98 Score = 26.9 bits (58), Expect = 1.8, Method: Compositional matrix adjust. Identities = 20/75 (26%), Positives = 38/75 (50%), Gaps = 12/75 (16%) Query: 24 SILDLSRYQ---DQRIQATFTGGRQITGILKGFDQLMNLVLDDVE--EQLRNPEDGKLTG 78 S+L S ++ DQ + +I G L+ DQ +NL LD++ ++ + P G Sbjct: 3 SMLFFSFFKTLVDQEVVVELKNDIEIKGTLQSVDQFLNLKLDNISCTDEKKYPH----LG 58 Query: 79 AIRKLGLVVVRGTTL 93 ++R + +RG+T+ Sbjct: 59 SVRN---IFIRGSTV 70 >5GM6-g nrPDB Length = 94 Score = 26.9 bits (58), Expect = 1.8, Method: Compositional matrix adjust. Identities = 12/58 (20%), Positives = 30/58 (51%) Query: 39 TFTGGRQITGILKGFDQLMNLVLDDVEEQLRNPEDGKLTGAIRKLGLVVVRGTTLVLI 96 + +I +K FD+ N+VL++V+E + + R + + +RG +++++ Sbjct: 33 SLRNNHKIIARVKAFDRHCNMVLENVKELWTEKKGKNVINRERFISKLFLRGDSVIVV 90 >4N0A-C nrPDB Length = 109 Score = 26.9 bits (58), Expect = 1.8, Method: Compositional matrix adjust. Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 9/63 (14%) Query: 33 DQRIQATFTGGRQITGILKGFDQLMNLVLDDVE--EQLRNPEDGKLTGAIRKLGLVVVRG 90 DQ + +I G L+ DQ +NL LD++ ++ + P G++R + +RG Sbjct: 26 DQEVVVELKNDIEIKGTLQSVDQFLNLKLDNISCTDEKKYPH----LGSVRN---IFIRG 78 Query: 91 TTL 93 +T+ Sbjct: 79 STV 81 >4MJ1-A nrPDB Length = 275 Score = 26.9 bits (58), Expect = 2.2, Method: Compositional matrix adjust. Identities = 13/44 (29%), Positives = 23/44 (52%) Query: 20 PRKESILDLSRYQDQRIQATFTGGRQITGILKGFDQLMNLVLDD 63 P + + D SR ++ R TFTGG + +L + ++LD+ Sbjct: 179 PVECWVPDPSRNENTRYFGTFTGGENVPPVLHVTNTATTVLLDE 222 >6GG0-1 nrPDB Length = 362 Score = 26.6 bits (57), Expect = 2.3, Method: Compositional matrix adjust. Identities = 13/44 (29%), Positives = 23/44 (52%) Query: 20 PRKESILDLSRYQDQRIQATFTGGRQITGILKGFDQLMNLVLDD 63 P + + D SR ++ R TFTGG + +L + ++LD+ Sbjct: 205 PVECWVPDPSRNENTRYFGTFTGGENVPPVLHVTNTATTVLLDE 248 >3T51-B nrPDB Length = 336 Score = 26.6 bits (57), Expect = 2.3, Method: Compositional matrix adjust. Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 3/68 (4%) Query: 34 QRIQATFTGGRQITGILKGFD--QLMNLVLDDVEEQLRNPEDGKLTGAI-RKLGLVVVRG 90 Q+IQ FT I G++ FD MN+ D+V +++ + +T AI + +V Sbjct: 125 QKIQTRFTLKAPIDGVITAFDLRAGMNIAKDNVVAKIQGMDPVWVTAAIPESIAWLVKDA 184 Query: 91 TTLVLIAP 98 + L P Sbjct: 185 SQFTLTVP 192 >3JB9-G nrPDB Length = 115 Score = 26.2 bits (56), Expect = 3.2, Method: Compositional matrix adjust. Identities = 17/61 (27%), Positives = 32/61 (52%), Gaps = 6/61 (9%) Query: 42 GGRQITGILKGFDQLMNLVLDDVEEQL---RNPEDGKLTGAIRK---LGLVVVRGTTLVL 95 +++ +K FD+ N+VL++V+E + GK AI K + + +RG +VL Sbjct: 49 NNKKLLARVKAFDRHSNMVLENVKEMWTEKKRTASGKKGKAINKDRFISKMFLRGDGVVL 108 Query: 96 I 96 + Sbjct: 109 V 109 >4WZJ-C nrPDB Length = 118 Score = 25.8 bits (55), Expect = 4.4, Method: Compositional matrix adjust. Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 1/55 (1%) Query: 28 LSRYQDQRIQATFTGGRQITGILKGFDQLMNLVLDDVEEQLRNPEDGKL-TGAIR 81 L + + + G Q+ G + G D MN L V+ L+N E +L T +IR Sbjct: 7 LMKLSHETVTIELKNGTQVHGTITGVDVSMNTHLKAVKMTLKNREPVQLETLSIR 61 >6FES-A nrPDB Length = 367 Score = 25.4 bits (54), Expect = 5.1, Method: Composition-based stats. Identities = 16/57 (28%), Positives = 26/57 (45%) Query: 27 DLSRYQDQRIQATFTGGRQITGILKGFDQLMNLVLDDVEEQLRNPEDGKLTGAIRKL 83 DL+R A I ++ +L+ V DD++E +NPED + I +L Sbjct: 143 DLARDNGYESVARLARKEIIRAVVDELKELIQNVNDDIKEVEKNPEDMEYWNKIYRL 199 >2OKV-A nrPDB Length = 209 Score = 25.0 bits (53), Expect = 6.7, Method: Compositional matrix adjust. Identities = 14/39 (35%), Positives = 26/39 (66%), Gaps = 2/39 (5%) Query: 34 QRI-QATFT-GGRQITGILKGFDQLMNLVLDDVEEQLRN 70 QR+ +A+ T GG QI+ I +G L+ + L+D +++L + Sbjct: 6 QRVTRASVTVGGEQISAIGRGICVLLGISLEDTQKELEH 44 >5XJU-A nrPDB Length = 82 Score = 25.0 bits (53), Expect = 7.1, Method: Compositional matrix adjust. Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 1/55 (1%) Query: 28 LSRYQDQRIQATFTGGRQITGILKGFDQLMNLVLDDVEEQLRNPEDGKL-TGAIR 81 L + + + G Q+ G + G D MN L V+ L+N E +L T +IR Sbjct: 7 LMKLSHETVTIELKNGTQVHGTITGVDVSMNTHLKAVKMTLKNREPVQLETLSIR 61 >3CQF-A nrPDB Length = 489 Score = 24.6 bits (52), Expect = 9.0, Method: Composition-based stats. Identities = 15/58 (25%), Positives = 29/58 (50%), Gaps = 7/58 (12%) Query: 21 RKESILDLSRYQDQRIQATFT----GG---RQITGILKGFDQLMNLVLDDVEEQLRNP 71 + S+ +Y+D ++TFT GG + K F+++ N++ D+ E +NP Sbjct: 289 KNNSVETSGQYKDIFEESTFTAVVLGGDAKEHNKVVTKDFNEIRNIIKDNAELSFKNP 346 >1YII-A nrPDB Length = 320 Score = 24.6 bits (52), Expect = 9.4, Method: Compositional matrix adjust. Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 4/57 (7%) Query: 33 DQRIQATFTGGRQITGILKGFDQLMNLVLDDVEEQLRNPEDGKLTGAIRKLGLVVVR 89 D+ T G R ++ + + FD+ M + +EE + D + +G + KL L VV+ Sbjct: 189 DEETFITILGTRSVSHLRRVFDKYMTISGFQIEETI----DRETSGDLEKLLLAVVK 241 >2A1X-A nrPDB Length = 308 Score = 24.6 bits (52), Expect = 9.5, Method: Compositional matrix adjust. Identities = 14/42 (33%), Positives = 22/42 (52%) Query: 52 GFDQLMNLVLDDVEEQLRNPEDGKLTGAIRKLGLVVVRGTTL 93 GF + NLV D ++ RN + ++ LGL V+R T+ Sbjct: 35 GFLVIKNLVPDADIQRFRNEFEKICRKEVKPLGLTVMRDVTI 76 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 3SWN-C nrPDB 162 3e-41 6QX9-67 nrPDB 127 8e-31 6ASO-G nrPDB 108 5e-25 3PGG-A nrPDB 100 2e-22 4M75-G nrPDB 98 9e-22 6ASO-C nrPDB 96 4e-21 4M75-A nrPDB 91 1e-19 6AH0-t nrPDB 90 2e-19 4C8Q-A nrPDB 87 1e-18 6AH0-d nrPDB 84 1e-17 3JB9-J nrPDB 82 4e-17 4EMG-A nrPDB 82 4e-17 3JCR-3 nrPDB 82 5e-17 3JB9-E nrPDB 81 1e-16 1TH7-A nrPDB 81 1e-16 6QX9-1b nrPDB 81 2e-16 4M77-E nrPDB 80 2e-16 1I8F-A nrPDB 80 2e-16 5ZWM-s nrPDB 79 3e-16 6AH0-z nrPDB 78 8e-16 4C8Q-D nrPDB 77 1e-15 6ASO-D nrPDB 76 4e-15 1JBM-A nrPDB 74 1e-14 5LJ3-g nrPDB 73 2e-14 Sequences not found previously or not previously below threshold: 3SWN-A nrPDB 66 4e-12 4EMK-A nrPDB 65 7e-12 5MKL-A1 nrPDB 60 2e-10 4XQ3-A nrPDB 59 5e-10 5LQW-b nrPDB 59 7e-10 3SWN-B nrPDB 54 2e-08 6QX9-66 nrPDB 53 3e-08 6QW6-4e nrPDB 53 4e-08 5GMK-i nrPDB 52 5e-08 1LJO-A nrPDB 52 7e-08 5GM6-g nrPDB 52 7e-08 6J6Q-g nrPDB 51 1e-07 3JB9-H nrPDB 50 2e-07 6QDV-e nrPDB 50 3e-07 6QDV-f nrPDB 49 4e-07 5Z58-f nrPDB 49 4e-07 5MQF-a nrPDB 49 6e-07 3JB9-I nrPDB 48 1e-06 1N9R-A nrPDB 47 1e-06 4EMH-A nrPDB 47 2e-06 5VSU-F nrPDB 46 3e-06 3JB9-G nrPDB 46 4e-06 4C8Q-B nrPDB 43 2e-05 5VSU-B nrPDB 43 3e-05 4N0A-C nrPDB 43 4e-05 1M5Q-A nrPDB 41 1e-04 5GMK-m nrPDB 40 3e-04 6QW6-64 nrPDB 40 3e-04 6QX9-62 nrPDB 40 3e-04 4M7D-A nrPDB 38 0.001 5XJU-A nrPDB 37 0.002 4WZJ-C nrPDB 37 0.002 6ASO-H nrPDB 34 0.016 3JB9-F nrPDB 33 0.025 5L0W-A nrPDB 29 0.42 5ES4-B nrPDB 29 0.67 5E6S-B nrPDB 29 0.67 1DBP-A nrPDB 28 0.77 4ZJP-A nrPDB 28 0.85 6ER0-A nrPDB 28 0.94 6OIX-A nrPDB 28 1.0 2O20-A nrPDB 27 1.8 5SZD-A nrPDB 27 1.8 5HS2-A nrPDB 27 1.9 >3SWN-C nrPDB Length = 117 Score = 162 bits (409), Expect = 3e-41, Method: Composition-based stats. Identities = 113/113 (100%), Positives = 113/113 (100%) Query: 1 MSSLQKRPGPGNSSQPTERPRKESILDLSRYQDQRIQATFTGGRQITGILKGFDQLMNLV 60 MSSLQKRPGPGNSSQPTERPRKESILDLSRYQDQRIQATFTGGRQITGILKGFDQLMNLV Sbjct: 5 MSSLQKRPGPGNSSQPTERPRKESILDLSRYQDQRIQATFTGGRQITGILKGFDQLMNLV 64 Query: 61 LDDVEEQLRNPEDGKLTGAIRKLGLVVVRGTTLVLIAPMDGSEEIPNPFVQAE 113 LDDVEEQLRNPEDGKLTGAIRKLGLVVVRGTTLVLIAPMDGSEEIPNPFVQAE Sbjct: 65 LDDVEEQLRNPEDGKLTGAIRKLGLVVVRGTTLVLIAPMDGSEEIPNPFVQAE 117 >6QX9-67 nrPDB Length = 103 Score = 127 bits (320), Expect = 8e-31, Method: Composition-based stats. Identities = 58/97 (59%), Positives = 74/97 (76%), Gaps = 1/97 (1%) Query: 18 ERPRKESILDLSRYQDQRIQATFTGGRQITGILKGFDQLMNLVLDDVEEQLRNPED-GKL 76 E+ +KESILDLS+Y D+ I+ F GGR+ +GILKGFD L+NLVLD E +R+P+D KL Sbjct: 5 EKKKKESILDLSKYIDKTIRVKFQGGREASGILKGFDPLLNLVLDGTIEYMRDPDDQYKL 64 Query: 77 TGAIRKLGLVVVRGTTLVLIAPMDGSEEIPNPFVQAE 113 T R+LGLVV RGT++VLI P DG E IPNPF+Q + Sbjct: 65 TEDTRQLGLVVCRGTSVVLICPQDGMEAIPNPFIQQQ 101 >6ASO-G nrPDB Length = 115 Score = 108 bits (270), Expect = 5e-25, Method: Composition-based stats. Identities = 45/98 (45%), Positives = 65/98 (66%), Gaps = 4/98 (4%) Query: 10 PGNSSQPTERPRKESILDLSRYQDQRIQATFTGGRQITGILKGFDQLMNLVLDDVEEQLR 69 P + E P++E+ILDL++Y+D +I+ GG+ + G+LKG+DQLMNLVLDD E + Sbjct: 12 PQQQRKKFEGPKREAILDLAKYKDSKIRVKLMGGKLVIGVLKGYDQLMNLVLDDTVEYMS 71 Query: 70 NPEDGKLTG----AIRKLGLVVVRGTTLVLIAPMDGSE 103 NP+D T RKLGL V+RGT LV ++ +GS+ Sbjct: 72 NPDDENNTELISKNARKLGLTVIRGTILVSLSSAEGSD 109 >3PGG-A nrPDB Length = 121 Score = 100 bits (248), Expect = 2e-22, Method: Composition-based stats. Identities = 27/106 (25%), Positives = 53/106 (50%), Gaps = 4/106 (3%) Query: 5 QKRPGPGNSSQPTERPRKESILD----LSRYQDQRIQATFTGGRQITGILKGFDQLMNLV 60 P N SQ + +I+ + + RI G ++ +G+L+GFD+ +N+V Sbjct: 6 YMSETPANKSQGGSNQKGGNIILPLALIDKCIGNRIYVVMKGDKEFSGVLRGFDEYVNMV 65 Query: 61 LDDVEEQLRNPEDGKLTGAIRKLGLVVVRGTTLVLIAPMDGSEEIP 106 LDDV+E ++ ++G +KL V+V +L++ + + +P Sbjct: 66 LDDVQEYGFKADEEDISGGNKKLKRVMVNRLETILLSGNNVAMLVP 111 >4M75-G nrPDB Length = 122 Score = 97.9 bits (242), Expect = 9e-22, Method: Composition-based stats. Identities = 32/104 (30%), Positives = 45/104 (43%), Gaps = 8/104 (7%) Query: 2 SSLQKRPGPGNSSQPTERPRKESILDLSRYQDQRIQATFTGGRQITGILKGFDQLMNLVL 61 +SL K+ G Q + P + L+ + Q++Q G I GIL D MNL L Sbjct: 14 TSLYKKAGENLYFQGSMLP----LYLLTNAKGQQMQIELKNGEIIQGILTNVDNWMNLTL 69 Query: 62 DDV----EEQLRNPEDGKLTGAIRKLGLVVVRGTTLVLIAPMDG 101 +V EE N ED + KL + +RGT + I D Sbjct: 70 SNVTEYSEESAINSEDNAESSKAVKLNEIYIRGTFIKFIKLQDN 113 >6ASO-C nrPDB Length = 97 Score = 95.6 bits (236), Expect = 4e-21, Method: Composition-based stats. Identities = 29/88 (32%), Positives = 47/88 (53%), Gaps = 5/88 (5%) Query: 23 ESILDLSRY-QDQRIQATFTGGRQITGILKGFDQLMNLVLDDVEEQLRNPEDGKLTGAIR 81 E+ LDL + D+R+ G R + G L+ FD N+VL D E + + +L+ + R Sbjct: 2 ETPLDLLKLNLDERVYIKLRGARTLVGTLQAFDSHCNIVLSDAVETIYQLNNEELSESER 61 Query: 82 KLGLVVVRGTTLVLIAP----MDGSEEI 105 + +V +RG T+ LI+ DG+ EI Sbjct: 62 RCEMVFIRGDTVTLISTPSEDDDGAVEI 89 >4M75-A nrPDB Length = 144 Score = 90.5 bits (223), Expect = 1e-19, Method: Composition-based stats. Identities = 23/77 (29%), Positives = 41/77 (53%), Gaps = 2/77 (2%) Query: 28 LSRYQDQRIQATFTGGRQITGILKGFDQLMNLVLDDVEEQLRNPEDGKLTGAIRKLGLVV 87 + D++I GR + G+L+ FDQ NL+L D E++ E+ K R G+ + Sbjct: 18 IVSSVDRKIFVLLRDGRMLFGVLRTFDQYANLILQDCVERIYFSEENKYAEEDR--GIFM 75 Query: 88 VRGTTLVLIAPMDGSEE 104 +RG +V++ +D +E Sbjct: 76 IRGENVVMLGEVDIDKE 92 >6AH0-t nrPDB Length = 91 Score = 89.8 bits (221), Expect = 2e-19, Method: Composition-based stats. Identities = 25/87 (28%), Positives = 43/87 (49%), Gaps = 5/87 (5%) Query: 13 SSQPTERPRKESILDL-SRYQDQRIQATFTGGRQITGILKGFDQLMNLVLDDVEEQLRNP 71 ++ T P + L+L + RI ++I G L GFD +N+VL+DV E P Sbjct: 2 AANATTNPSQLLPLELVDKCIGSRIHIVMKSDKEIVGTLLGFDDFVNMVLEDVTEFEITP 61 Query: 72 EDGKLTGAIRKLGLVVVRGTTLVLIAP 98 E ++T KL +++ G + ++ P Sbjct: 62 EGRRIT----KLDQILLNGNNITMLVP 84 >4C8Q-A nrPDB Length = 101 Score = 87.1 bits (214), Expect = 1e-18, Method: Composition-based stats. Identities = 23/77 (29%), Positives = 41/77 (53%), Gaps = 2/77 (2%) Query: 28 LSRYQDQRIQATFTGGRQITGILKGFDQLMNLVLDDVEEQLRNPEDGKLTGAIRKLGLVV 87 + D++I GR + G+L+ FDQ NL+L D E++ E+ K R G+ + Sbjct: 2 IVSSVDRKIFVLLRDGRMLFGVLRTFDQYANLILQDCVERIYFSEENKYAEEDR--GIFM 59 Query: 88 VRGTTLVLIAPMDGSEE 104 +RG +V++ +D +E Sbjct: 60 IRGENVVMLGEVDIDKE 76 >6AH0-d nrPDB Length = 76 Score = 84.4 bits (207), Expect = 1e-17, Method: Composition-based stats. Identities = 24/80 (30%), Positives = 45/80 (56%), Gaps = 7/80 (8%) Query: 21 RKESILDLSRYQDQRIQATFTGGRQITGILKGFDQLMNLVLDDVEEQLRNPEDGKLTGAI 80 K +L ++ D+++ GGR + GIL+GFD MNLV+D+ E +G Sbjct: 2 SKAHPPELKKFMDKKLSLKLNGGRHVQGILRGFDPFMNLVIDECVEMAT-------SGQQ 54 Query: 81 RKLGLVVVRGTTLVLIAPMD 100 +G+VV+RG +++++ ++ Sbjct: 55 NNIGMVVIRGNSIIMLEALE 74 >3JB9-J nrPDB Length = 77 Score = 82.5 bits (202), Expect = 4e-17, Method: Composition-based stats. Identities = 24/74 (32%), Positives = 44/74 (59%), Gaps = 7/74 (9%) Query: 27 DLSRYQDQRIQATFTGGRQITGILKGFDQLMNLVLDDVEEQLRNPEDGKLTGAIRKLGLV 86 DL +Y D+++ G R++ G+L+G+D +N+VL+D E K+ G K+G V Sbjct: 8 DLKKYLDRQVFVQLNGSRKVYGVLRGYDIFLNIVLEDSIE-------EKVDGEKVKIGSV 60 Query: 87 VVRGTTLVLIAPMD 100 +RG ++++I +D Sbjct: 61 AIRGNSVIMIETLD 74 >4EMG-A nrPDB Length = 93 Score = 82.1 bits (201), Expect = 4e-17, Method: Composition-based stats. Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 12/93 (12%) Query: 13 SSQPTERPRKESILDLSRY-QDQRIQATFTGGRQITGILKGFDQLMNLVLDDVEEQLRNP 71 S+Q P LDL R D+ + G R++ G L +D+ +N+VL D EE + Sbjct: 3 SAQAVAEP-----LDLVRLSLDEIVYVKLRGDRELNGRLHAYDEHLNMVLGDAEEIVTIF 57 Query: 72 EDGKLTGAI------RKLGLVVVRGTTLVLIAP 98 +D + + ++ VRG +++LIAP Sbjct: 58 DDEETDKDKALKTIRKHYEMLFVRGDSVILIAP 90 >3JCR-3 nrPDB Length = 102 Score = 82.1 bits (201), Expect = 5e-17, Method: Composition-based stats. Identities = 30/91 (32%), Positives = 44/91 (48%), Gaps = 7/91 (7%) Query: 15 QPTERPRKESILDLSRY-QDQRIQATFTGGRQITGILKGFDQLMNLVLDDVEEQLRNPED 73 Q E LDL R D+RI R++ G L +DQ +N++L DVEE + E Sbjct: 7 QQQTTNTVEEPLDLIRLSLDERIYVKMRNDRELRGRLHAYDQHLNMILGDVEETVTTIEI 66 Query: 74 GKLT------GAIRKLGLVVVRGTTLVLIAP 98 + T R + ++ VRG +VL+AP Sbjct: 67 DEETYEEIYKSTKRNIPMLFVRGDGVVLVAP 97 >3JB9-E nrPDB Length = 147 Score = 80.9 bits (198), Expect = 1e-16, Method: Composition-based stats. Identities = 27/84 (32%), Positives = 38/84 (45%), Gaps = 9/84 (10%) Query: 28 LSRYQDQRIQATFTGGRQITGILKGFDQLMNLVLDDVEEQL----RNPEDGKLTGAIRKL 83 + + + T GR G L FD MNLVL D +E +N + R L Sbjct: 6 MVSLLNHSLNVTTKDGRTFVGQLLAFDGFMNLVLSDCQEYRHIKKQNVPSNSVYEEKRML 65 Query: 84 GLVVVRGTTLVLIA-----PMDGS 102 GLV++RG +V ++ PMD S Sbjct: 66 GLVILRGEFIVSLSVQGPPPMDPS 89 >1TH7-A nrPDB Length = 81 Score = 80.5 bits (197), Expect = 1e-16, Method: Composition-based stats. Identities = 25/75 (33%), Positives = 43/75 (57%), Gaps = 7/75 (9%) Query: 28 LSRYQDQRIQATFTGGRQITGILKGFDQLMNLVLDDVEEQLRNPEDGKLTGAIRKLGLVV 87 L+ + + G +++ G+L+ +DQ MNLVL D EE + G+ +KLG +V Sbjct: 14 LAESLNNLVLVKLKGNKEVRGMLRSYDQHMNLVLSDSEEIQSD-------GSGKKLGTIV 66 Query: 88 VRGTTLVLIAPMDGS 102 +RG ++LI+P+ S Sbjct: 67 IRGDNVILISPLQTS 81 >6QX9-1b nrPDB Length = 240 Score = 80.5 bits (197), Expect = 2e-16, Method: Composition-based stats. Identities = 28/84 (33%), Positives = 42/84 (50%), Gaps = 8/84 (9%) Query: 28 LSRYQDQRIQATFTGGRQITGILKGFDQLMNLVLDDVEEQL-RNPEDGKLT--GAIRKLG 84 + ++ D R++ GR G K FD+ MNL+L D +E P++ K R LG Sbjct: 9 MLQHIDYRMRCILQDGRIFIGTFKAFDKHMNLILCDCDEFRKIKPKNSKQAEREEKRVLG 68 Query: 85 LVVVRGTTLVLIAPMDGSEEIPNP 108 LV++RG LV + + E P P Sbjct: 69 LVLLRGENLVSM-----TVEGPPP 87 >4M77-E nrPDB Length = 93 Score = 80.1 bits (196), Expect = 2e-16, Method: Composition-based stats. Identities = 19/82 (23%), Positives = 40/82 (48%), Gaps = 1/82 (1%) Query: 18 ERPRKESILDLSRYQDQRIQATFTGGRQITGILKGFDQLMNLVLDDVEEQLRNPEDG-KL 76 P + + + +Q++ R+ G L GFD +N++L+D E L +PED + Sbjct: 2 SLPEILPLEVIDKTINQKVLIVLQSNREFEGTLVGFDDFVNVILEDAVEWLIDPEDESRN 61 Query: 77 TGAIRKLGLVVVRGTTLVLIAP 98 ++ G +++ G + ++ P Sbjct: 62 EKVMQHHGRMLLSGNNIAILVP 83 >1I8F-A nrPDB Length = 81 Score = 80.1 bits (196), Expect = 2e-16, Method: Composition-based stats. Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 8/74 (10%) Query: 28 LSRYQDQRIQATFTGGRQITGILKGFDQLMNLVLDDVEEQLRNPEDGKLTGAIRKLGLVV 87 L +++ +I GIL+ FDQ +NL+L+D EE + G + K G +V Sbjct: 16 LQDSIGKQVLVKLRDSHEIRGILRSFDQHVNLLLEDAEEI--------IDGNVYKRGTMV 67 Query: 88 VRGTTLVLIAPMDG 101 VRG ++ I+P+ G Sbjct: 68 VRGENVLFISPVPG 81 >5ZWM-s nrPDB Length = 187 Score = 79.4 bits (194), Expect = 3e-16, Method: Composition-based stats. Identities = 26/81 (32%), Positives = 36/81 (44%), Gaps = 4/81 (4%) Query: 25 ILDLSRYQDQRIQATFTGGRQITGILKGFDQLMNLVLDDV----EEQLRNPEDGKLTGAI 80 + L+ + Q++Q G I GIL D MNL L +V EE N ED + Sbjct: 4 LYLLTNAKGQQMQIELKNGEIIQGILTNVDNWMNLTLSNVTEYSEESAINSEDNAESSKA 63 Query: 81 RKLGLVVVRGTTLVLIAPMDG 101 KL + +RGT + I D Sbjct: 64 VKLNEIYIRGTFIKFIKLQDN 84 >6AH0-z nrPDB Length = 96 Score = 77.8 bits (190), Expect = 8e-16, Method: Composition-based stats. Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 3/73 (4%) Query: 28 LSRYQDQRIQATFTGGRQITGILKGFDQLMNLVLDDVEEQLRNPEDGKLTGAIRKLGLVV 87 L Y ++ + + GR I G LKGFDQ +NL+LD+ E++ + G LGL + Sbjct: 5 LENYINRTVAVITSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGV---EQVVLGLYI 61 Query: 88 VRGTTLVLIAPMD 100 VRG + +I +D Sbjct: 62 VRGDNVAVIGEID 74 >4C8Q-D nrPDB Length = 114 Score = 77.4 bits (189), Expect = 1e-15, Method: Composition-based stats. Identities = 26/81 (32%), Positives = 36/81 (44%), Gaps = 4/81 (4%) Query: 25 ILDLSRYQDQRIQATFTGGRQITGILKGFDQLMNLVLDDV----EEQLRNPEDGKLTGAI 80 + L+ + Q++Q G I GIL D MNL L +V EE N ED + Sbjct: 4 LYLLTNAKGQQMQIELKNGEIIQGILTNVDNWMNLTLSNVTEYSEESAINSEDNAESSKA 63 Query: 81 RKLGLVVVRGTTLVLIAPMDG 101 KL + +RGT + I D Sbjct: 64 VKLNEIYIRGTFIKFIKLQDN 84 >6ASO-D nrPDB Length = 93 Score = 75.9 bits (185), Expect = 4e-15, Method: Composition-based stats. Identities = 26/81 (32%), Positives = 36/81 (44%), Gaps = 4/81 (4%) Query: 25 ILDLSRYQDQRIQATFTGGRQITGILKGFDQLMNLVLDDV----EEQLRNPEDGKLTGAI 80 + L+ + Q++Q G I GIL D MNL L +V EE N ED + Sbjct: 4 LYLLTNAKGQQMQIELKNGEIIQGILTNVDNWMNLTLSNVTEYSEESAINSEDNAESSKA 63 Query: 81 RKLGLVVVRGTTLVLIAPMDG 101 KL + +RGT + I D Sbjct: 64 VKLNEIYIRGTFIKFIKLQDN 84 >1JBM-A nrPDB Length = 86 Score = 74.4 bits (181), Expect = 1e-14, Method: Composition-based stats. Identities = 30/74 (40%), Positives = 42/74 (56%), Gaps = 8/74 (10%) Query: 25 ILD-LSRYQDQRIQATFTGGRQITGILKGFDQLMNLVLDDVEEQLRNPEDGKLTGAIRKL 83 LD L + + G R+ G+LK FD MNLVL+D EE EDG++T R+L Sbjct: 14 PLDALGNSLNSPVIIKLKGDREFRGVLKSFDLHMNLVLNDAEE----LEDGEVT---RRL 66 Query: 84 GLVVVRGTTLVLIA 97 G V++RG +V I+ Sbjct: 67 GTVLIRGDNIVYIS 80 >5LJ3-g nrPDB Length = 77 Score = 73.2 bits (178), Expect = 2e-14, Method: Composition-based stats. Identities = 25/76 (32%), Positives = 44/76 (57%), Gaps = 6/76 (7%) Query: 27 DLSRYQDQRIQATFTGGRQITGILKGFDQLMNLVLDDVEEQLRNPEDGKLTGAIRKLGL- 85 +L +Y D++I G R++ GIL+G+D +N+VLDD E +G+ +LGL Sbjct: 6 ELKKYMDKKILLNINGSRKVAGILRGYDIFLNVVLDDAMEI-----NGEDPANNHQLGLQ 60 Query: 86 VVVRGTTLVLIAPMDG 101 V+RG +++ + +D Sbjct: 61 TVIRGNSIISLEALDA 76 >3SWN-A nrPDB Length = 82 Score = 65.5 bits (158), Expect = 4e-12, Method: Composition-based stats. Identities = 19/76 (25%), Positives = 32/76 (42%), Gaps = 7/76 (9%) Query: 24 SILDL-SRYQDQRIQATFTGGRQITGILKGFDQLMNLVLDDVEEQLRNPEDGKLTGAIRK 82 L+L + + R+ G L GFD +N+VL DV E +TG K Sbjct: 8 LPLELIDKCIGSNLWVIMKSEREFAGTLVGFDDYVNIVLKDVTEY------DTVTGVTEK 61 Query: 83 LGLVVVRGTTLVLIAP 98 +++ G + ++ P Sbjct: 62 HSEMLLNGNGMCMLIP 77 >4EMK-A nrPDB Length = 94 Score = 65.1 bits (157), Expect = 7e-12, Method: Composition-based stats. Identities = 19/76 (25%), Positives = 32/76 (42%), Gaps = 7/76 (9%) Query: 24 SILDL-SRYQDQRIQATFTGGRQITGILKGFDQLMNLVLDDVEEQLRNPEDGKLTGAIRK 82 L+L + + R+ G L GFD +N+VL DV E +TG K Sbjct: 20 LPLELIDKCIGSNLWVIMKSEREFAGTLVGFDDYVNIVLKDVTEY------DTVTGVTEK 73 Query: 83 LGLVVVRGTTLVLIAP 98 +++ G + ++ P Sbjct: 74 HSEMLLNGNGMCMLIP 89 >5MKL-A1 nrPDB Length = 87 Score = 60.1 bits (144), Expect = 2e-10, Method: Composition-based stats. Identities = 21/81 (25%), Positives = 35/81 (43%), Gaps = 6/81 (7%) Query: 18 ERPRKESILD-LSRYQDQRIQATFTGGRQITGILKGFDQLMNLVLDDVEEQLRNPEDGKL 76 + + E+ L L ++ + G + G L+ D MNLVL D E D Sbjct: 1 MQAKIENPLKSLKTALNKIVLVKLKNGEEYVGRLEQSDGTMNLVLKDCTEYREGTSDPVA 60 Query: 77 TGAIRKLGLVVVRGTTLVLIA 97 K G V++RG+ ++ I+ Sbjct: 61 -----KYGRVLIRGSNILFIS 76 >4XQ3-A nrPDB Length = 91 Score = 58.6 bits (140), Expect = 5e-10, Method: Composition-based stats. Identities = 20/81 (24%), Positives = 36/81 (44%), Gaps = 6/81 (7%) Query: 18 ERPRKESILD-LSRYQDQRIQATFTGGRQITGILKGFDQLMNLVLDDVEEQLRNPEDGKL 76 + + E+ L L ++ + G + G L+ D MNLVL D E Sbjct: 5 MQAKVENPLKSLRTAINRIVLVKLKDGSEYIGKLEQTDGTMNLVLRDCTEIR-----EGT 59 Query: 77 TGAIRKLGLVVVRGTTLVLIA 97 + + K G V++RG+ ++ I+ Sbjct: 60 SEPVAKYGRVLIRGSNILFIS 80 >5LQW-b nrPDB Length = 196 Score = 58.6 bits (140), Expect = 7e-10, Method: Composition-based stats. Identities = 23/88 (26%), Positives = 39/88 (44%), Gaps = 15/88 (17%) Query: 28 LSRYQDQRIQATFTGGRQITGILKGFDQLMNLVLDDVEEQ------------LRNPEDG- 74 L+ D +++ GR G L FD+ MNLVL++ E+ ++ +DG Sbjct: 12 LANLIDYKLRVLTQDGRVYIGQLMAFDKHMNLVLNECIEERVPKTQLDKLRPRKDSKDGT 71 Query: 75 --KLTGAIRKLGLVVVRGTTLVLIAPMD 100 + R LGL ++RG ++ D Sbjct: 72 TLNIKVEKRVLGLTILRGEQILSTVVED 99 >3SWN-B nrPDB Length = 77 Score = 53.6 bits (127), Expect = 2e-08, Method: Composition-based stats. Identities = 16/73 (21%), Positives = 30/73 (41%), Gaps = 7/73 (9%) Query: 28 LSRYQDQRIQATFTGGRQITGILKGFDQLMNLVLDDVEEQLRNPEDGKLTGAIRKLGLVV 87 L++ +++ + G GIL D MNL L+ EE + G Sbjct: 11 LNKVIGKKVLIRLSSGVDYKGILSCLDGYMNLALERTEEYV-------NGKKTNVYGDAF 63 Query: 88 VRGTTLVLIAPMD 100 +RG ++ ++ +D Sbjct: 64 IRGNNVLYVSALD 76 >6QX9-66 nrPDB Length = 80 Score = 52.8 bits (125), Expect = 3e-08, Method: Composition-based stats. Identities = 18/80 (22%), Positives = 31/80 (38%), Gaps = 8/80 (10%) Query: 21 RKESILD-LSRYQDQRIQATFTGGRQITGILKGFDQLMNLVLDDVEEQLRNPEDGKLTGA 79 RK++ D L + + + G G+L D MN+ L+ EE + Sbjct: 4 RKQTPSDFLKQIIGRPVVVKLNSGVDYRGVLACLDGYMNIALEQTEEYV-------NGQL 56 Query: 80 IRKLGLVVVRGTTLVLIAPM 99 K G +RG ++ I+ Sbjct: 57 KNKYGDAFIRGNNVLYISTQ 76 >6QW6-4e nrPDB Length = 92 Score = 52.8 bits (125), Expect = 4e-08, Method: Composition-based stats. Identities = 26/97 (26%), Positives = 40/97 (41%), Gaps = 13/97 (13%) Query: 9 GPGNSSQPTERPRKESILDLSRYQDQRIQATF----TGGRQITGILKGFDQLMNLVLDDV 64 G G Q I RY R + +I G + GFD+ MNLVLDD Sbjct: 5 GQGQKVQKVMVQPINLIF---RYLQNRSRIQVWLYEQVNMRIEGCIIGFDEYMNLVLDDA 61 Query: 65 EEQLRNPEDGKLTGAIRKLGLVVVRGTTLVLIAPMDG 101 EE T + ++LG ++++G + L+ + Sbjct: 62 EEIHSK------TKSRKQLGRIMLKGDNITLLQSVSN 92 >5GMK-i nrPDB Length = 94 Score = 52.4 bits (124), Expect = 5e-08, Method: Composition-based stats. Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 1/56 (1%) Query: 46 ITGILKGFDQLMNLVLDDVEEQLRNPEDGKLTGAI-RKLGLVVVRGTTLVLIAPMD 100 I G + GFD+ MN+V+D+ E N DGK LG ++++G + LI D Sbjct: 39 IKGKIVGFDEFMNVVIDEAVEIPVNSADGKEDVEKGTPLGKILLKGDNITLITSAD 94 >1LJO-A nrPDB Length = 77 Score = 51.6 bits (122), Expect = 7e-08, Method: Composition-based stats. Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 8/74 (10%) Query: 28 LSRYQDQRIQATFTGGR-QITGILKGFDQLMNLVLDDVEEQLRNPEDGKLTGAIRKLGLV 86 + + I+ G Q+ G L+G D MNL L + E K +R LG + Sbjct: 10 VKSMVGKIIRVEMKGEENQLVGKLEGVDDYMNLYLTNAMEC-------KGEEKVRSLGEI 62 Query: 87 VVRGTTLVLIAPMD 100 V+RG +VLI P + Sbjct: 63 VLRGNNVVLIQPQE 76 >5GM6-g nrPDB Length = 94 Score = 51.6 bits (122), Expect = 7e-08, Method: Composition-based stats. Identities = 12/61 (19%), Positives = 31/61 (50%) Query: 36 IQATFTGGRQITGILKGFDQLMNLVLDDVEEQLRNPEDGKLTGAIRKLGLVVVRGTTLVL 95 + + +I +K FD+ N+VL++V+E + + R + + +RG ++++ Sbjct: 30 VIISLRNNHKIIARVKAFDRHCNMVLENVKELWTEKKGKNVINRERFISKLFLRGDSVIV 89 Query: 96 I 96 + Sbjct: 90 V 90 >6J6Q-g nrPDB Length = 110 Score = 50.9 bits (120), Expect = 1e-07, Method: Composition-based stats. Identities = 12/61 (19%), Positives = 31/61 (50%) Query: 36 IQATFTGGRQITGILKGFDQLMNLVLDDVEEQLRNPEDGKLTGAIRKLGLVVVRGTTLVL 95 + + +I +K FD+ N+VL++V+E + + R + + +RG ++++ Sbjct: 44 VIISLRNNHKIIARVKAFDRHCNMVLENVKELWTEKKGKNVINRERFISKLFLRGDSVIV 103 Query: 96 I 96 + Sbjct: 104 V 104 >3JB9-H nrPDB Length = 84 Score = 49.7 bits (117), Expect = 2e-07, Method: Composition-based stats. Identities = 21/86 (24%), Positives = 37/86 (43%), Gaps = 8/86 (9%) Query: 15 QPTERPRKESIL-DLSRYQDQRIQATFTGGRQITGILKGFDQLMNLVLDDVEEQLRNPED 73 Q P I L ++ I ++ G ++GFD+ MN+VLDD + Sbjct: 6 QKVMIPPINFIFKLLQQHTPVSIWLFEQTDIRLQGQIRGFDEFMNIVLDDAVQV------ 59 Query: 74 GKLTGAIRKLGLVVVRGTTLVLIAPM 99 R+LG ++++G + LI + Sbjct: 60 -DAKNNKRELGRILLKGDNITLIQAI 84 >6QDV-e nrPDB Length = 81 Score = 49.7 bits (117), Expect = 3e-07, Method: Composition-based stats. Identities = 19/54 (35%), Positives = 31/54 (57%), Gaps = 6/54 (11%) Query: 46 ITGILKGFDQLMNLVLDDVEEQLRNPEDGKLTGAIRKLGLVVVRGTTLVLIAPM 99 I G + GFD+ MNLVLDD EE T + ++LG ++++G + L+ + Sbjct: 33 IEGCIIGFDEYMNLVLDDAEEIHSK------TKSRKQLGRIMLKGDNITLLQSV 80 >6QDV-f nrPDB Length = 72 Score = 49.3 bits (116), Expect = 4e-07, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 7/69 (10%) Query: 28 LSRYQDQRIQATFTGGRQITGILKGFDQLMNLVLDDVEEQLRNPEDGKLTGAIRKLGLVV 87 L+ + + G + G L D MN+ L + EE + DG L+G LG V+ Sbjct: 8 LNGLTGKPVMVKLKWGMEYKGYLVSVDGYMNMQLANTEEYI----DGALSG---HLGEVL 60 Query: 88 VRGTTLVLI 96 +R ++ I Sbjct: 61 IRCNNVLYI 69 >5Z58-f nrPDB Length = 86 Score = 49.3 bits (116), Expect = 4e-07, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 7/69 (10%) Query: 28 LSRYQDQRIQATFTGGRQITGILKGFDQLMNLVLDDVEEQLRNPEDGKLTGAIRKLGLVV 87 L+ + + G + G L D MN+ L + EE + DG L+G LG V+ Sbjct: 11 LNGLTGKPVMVKLKWGMEYKGYLVSVDGYMNMQLANTEEYI----DGALSG---HLGEVL 63 Query: 88 VRGTTLVLI 96 +R ++ I Sbjct: 64 IRCNNVLYI 72 >5MQF-a nrPDB Length = 118 Score = 48.6 bits (114), Expect = 6e-07, Method: Composition-based stats. Identities = 13/72 (18%), Positives = 35/72 (48%), Gaps = 7/72 (9%) Query: 32 QDQRIQATFTGGRQITGILKGFDQLMNLVLDDVEEQ-------LRNPEDGKLTGAIRKLG 84 + ++ +++ G +K FD+ N+VL++V+E + + K R + Sbjct: 38 NNTQVLINCRNNKKLLGRVKAFDRHCNMVLENVKEMWTEVPKSGKGKKKSKPVNKDRYIS 97 Query: 85 LVVVRGTTLVLI 96 + +RG +++++ Sbjct: 98 KMFLRGDSVIVV 109 >3JB9-I nrPDB Length = 78 Score = 47.8 bits (112), Expect = 1e-06, Method: Composition-based stats. Identities = 18/71 (25%), Positives = 31/71 (43%), Gaps = 7/71 (9%) Query: 28 LSRYQDQRIQATFTGGRQITGILKGFDQLMNLVLDDVEEQLRNPEDGKLTGAIRKLGLVV 87 L + + G++ G L+ D MNL L + EE + DG TG LG ++ Sbjct: 12 LQGLIGKPVLVRLKWGQEYKGTLQSVDSYMNLQLLNAEELV----DGVKTGD---LGEIL 64 Query: 88 VRGTTLVLIAP 98 +R ++ + Sbjct: 65 IRCNNVLWVGE 75 >1N9R-A nrPDB Length = 93 Score = 47.4 bits (111), Expect = 1e-06, Method: Composition-based stats. Identities = 15/75 (20%), Positives = 26/75 (34%), Gaps = 8/75 (10%) Query: 28 LSRYQDQRIQATFT-GGRQITGILKGFDQLMNLVLDDVEEQLRNPEDGKLTGAIRKLGLV 86 L + R+ + G L D NL L++ EE + G LG + Sbjct: 26 LKGLVNHRVGVKLKFNSTEYRGTLVSTDNYFNLQLNEAEEFVAGVSHGT-------LGEI 78 Query: 87 VVRGTTLVLIAPMDG 101 +R ++ I + Sbjct: 79 FIRCNNVLYIRELPN 93 >4EMH-A nrPDB Length = 105 Score = 47.0 bits (110), Expect = 2e-06, Method: Composition-based stats. Identities = 16/74 (21%), Positives = 27/74 (36%), Gaps = 6/74 (8%) Query: 27 DLSRYQDQRIQATFTGGRQITGILKGFDQLMNLVLDDVEEQLRNPEDGKLTGAIRKLGLV 86 L+ Q + I G G L+ D MNL L +V + + + +L Sbjct: 20 LLNATQGRPILVELKNGETFNGHLENCDNYMNLTLREVIRTMPDGD------KFFRLPEC 73 Query: 87 VVRGTTLVLIAPMD 100 +RG + + D Sbjct: 74 YIRGNNIKYLRIQD 87 >5VSU-F nrPDB Length = 88 Score = 46.2 bits (108), Expect = 3e-06, Method: Composition-based stats. Identities = 16/72 (22%), Positives = 26/72 (36%), Gaps = 3/72 (4%) Query: 28 LSRYQDQRIQATFTGGRQITGILKGFDQLMNLVLDDVEEQLRNPEDGKLTGAIRKLGLVV 87 LS + + G +G L+ D MN+ L E E + V Sbjct: 18 LSDIIGKTVNVKLASGLLYSGRLESIDGFMNVALSSATEHY---ESNNNKLLNKFNSDVF 74 Query: 88 VRGTTLVLIAPM 99 +RGT ++ I+ Sbjct: 75 LRGTQVMYISEQ 86 >3JB9-G nrPDB Length = 115 Score = 45.9 bits (107), Expect = 4e-06, Method: Composition-based stats. Identities = 15/74 (20%), Positives = 36/74 (48%), Gaps = 6/74 (8%) Query: 35 RIQATFTGGRQITGILKGFDQLMNLVLDDVEE------QLRNPEDGKLTGAIRKLGLVVV 88 ++ +++ +K FD+ N+VL++V+E + + + GK R + + + Sbjct: 42 QVLINCRNNKKLLARVKAFDRHSNMVLENVKEMWTEKKRTASGKKGKAINKDRFISKMFL 101 Query: 89 RGTTLVLIAPMDGS 102 RG +VL+ + + Sbjct: 102 RGDGVVLVVRIPSA 115 >4C8Q-B nrPDB Length = 105 Score = 43.2 bits (100), Expect = 2e-05, Method: Composition-based stats. Identities = 16/68 (23%), Positives = 29/68 (42%), Gaps = 5/68 (7%) Query: 29 SRYQDQRIQATFTGGRQITGILKGFDQLMNLVLDDVEEQLRNPEDGKLTGAIRKLGLVVV 88 DQ + +I G L+ DQ +NL LD+ + D K + + + + Sbjct: 18 KTLVDQEVVVELKNDIEIKGTLQSVDQFLNLKLDN-----ISCTDEKKYPHLGSVRNIFI 72 Query: 89 RGTTLVLI 96 RG+T+ + Sbjct: 73 RGSTVRYV 80 >5VSU-B nrPDB Length = 98 Score = 43.2 bits (100), Expect = 3e-05, Method: Composition-based stats. Identities = 16/68 (23%), Positives = 29/68 (42%), Gaps = 5/68 (7%) Query: 29 SRYQDQRIQATFTGGRQITGILKGFDQLMNLVLDDVEEQLRNPEDGKLTGAIRKLGLVVV 88 DQ + +I G L+ DQ +NL LD+ + D K + + + + Sbjct: 11 KTLVDQEVVVELKNDIEIKGTLQSVDQFLNLKLDN-----ISCTDEKKYPHLGSVRNIFI 65 Query: 89 RGTTLVLI 96 RG+T+ + Sbjct: 66 RGSTVRYV 73 >4N0A-C nrPDB Length = 109 Score = 42.8 bits (99), Expect = 4e-05, Method: Composition-based stats. Identities = 16/68 (23%), Positives = 29/68 (42%), Gaps = 5/68 (7%) Query: 29 SRYQDQRIQATFTGGRQITGILKGFDQLMNLVLDDVEEQLRNPEDGKLTGAIRKLGLVVV 88 DQ + +I G L+ DQ +NL LD+ + D K + + + + Sbjct: 22 KTLVDQEVVVELKNDIEIKGTLQSVDQFLNLKLDN-----ISCTDEKKYPHLGSVRNIFI 76 Query: 89 RGTTLVLI 96 RG+T+ + Sbjct: 77 RGSTVRYV 84 >1M5Q-A nrPDB Length = 130 Score = 41.2 bits (95), Expect = 1e-04, Method: Composition-based stats. Identities = 17/95 (17%), Positives = 31/95 (32%), Gaps = 24/95 (25%) Query: 27 DLSRYQDQRIQATFTGGRQITGILKGFDQLMNLVLD-----------------------D 63 +L+ + +Q + G G+L D +N+VL D Sbjct: 4 ELNNLLGREVQVVLSNGEVYKGVLHAVDNQLNIVLANASNKAGEKFNRVFIMYRYIVHID 63 Query: 64 VEEQLRNPEDGKLTGAIRKLGLV-VVRGTTLVLIA 97 E+ + + G+V + T +VLI Sbjct: 64 STERRIDMREFAKQAEKIFPGMVKYIEETNVVLIG 98 >5GMK-m nrPDB Length = 146 Score = 39.7 bits (91), Expect = 3e-04, Method: Composition-based stats. Identities = 14/63 (22%), Positives = 27/63 (42%) Query: 28 LSRYQDQRIQATFTGGRQITGILKGFDQLMNLVLDDVEEQLRNPEDGKLTGAIRKLGLVV 87 L + +++++ G + G L+ MN +L DV+ L P KL + + Sbjct: 7 LKKLRNEQVTIELKNGTTVWGTLQSVSPQMNAILTDVKLTLPQPRLNKLNSNGIAMASLY 66 Query: 88 VRG 90 + G Sbjct: 67 LTG 69 >6QW6-64 nrPDB Length = 139 Score = 39.7 bits (91), Expect = 3e-04, Method: Composition-based stats. Identities = 15/74 (20%), Positives = 27/74 (36%), Gaps = 6/74 (8%) Query: 27 DLSRYQDQRIQATFTGGRQITGILKGFDQLMNLVLDDVEEQLRNPEDGKLTGAIRKLGLV 86 L Q+ + G G L D MN+ L +V R+ + ++ Sbjct: 6 LLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGD------KFWRMPEC 59 Query: 87 VVRGTTLVLIAPMD 100 +RG+T+ + D Sbjct: 60 YIRGSTIKYLRIPD 73 >6QX9-62 nrPDB Length = 95 Score = 39.7 bits (91), Expect = 3e-04, Method: Composition-based stats. Identities = 14/83 (16%), Positives = 32/83 (38%), Gaps = 7/83 (8%) Query: 29 SRYQDQRIQATFTGGRQITGILKGFDQLMNLVLDDVEEQLRNPEDGKLTGAIRKLGLVVV 88 + + I G L DQ +N+ L D+ + +PE +++ + Sbjct: 8 KSLVGKDVVVELKNDLSICGTLHSVDQYLNIKLTDI--SVTDPEKYPHMLSVKNC---FI 62 Query: 89 RGTTLVLIAPMDGSEEIPNPFVQ 111 RG+ + + ++E+ +Q Sbjct: 63 RGSVVRYVQL--PADEVDTQLLQ 83 >4M7D-A nrPDB Length = 96 Score = 38.2 bits (87), Expect = 0.001, Method: Composition-based stats. Identities = 17/77 (22%), Positives = 32/77 (41%), Gaps = 9/77 (11%) Query: 28 LSRYQDQRIQATFTGGRQITGILKGFDQLMNLVLDDVEEQLRNPEDGKLTGAIRKLGLVV 87 L Y ++R+ G + L GFD+ NL L +V ++ K + Sbjct: 5 LKDYLNKRVVIILVDGESLIASLNGFDKNTNLFLTNVFNRISKEFISKAQ---------L 55 Query: 88 VRGTTLVLIAPMDGSEE 104 +RG+ + L+ +D + Sbjct: 56 LRGSEIALVGLIDAEND 72 >5XJU-A nrPDB Length = 82 Score = 37.0 bits (84), Expect = 0.002, Method: Composition-based stats. Identities = 16/66 (24%), Positives = 27/66 (40%), Gaps = 7/66 (10%) Query: 28 LSRYQDQRIQATFTGGRQITGILKGFDQLMNLVLDDVEEQLRNPEDGKLTGAIRKLGLVV 87 L + + + G Q+ G + G D MN L V+ L+N E +L + Sbjct: 7 LMKLSHETVTIELKNGTQVHGTITGVDVSMNTHLKAVKMTLKNRE-------PVQLETLS 59 Query: 88 VRGTTL 93 +RG + Sbjct: 60 IRGNNI 65 >4WZJ-C nrPDB Length = 118 Score = 37.0 bits (84), Expect = 0.002, Method: Composition-based stats. Identities = 16/66 (24%), Positives = 27/66 (40%), Gaps = 7/66 (10%) Query: 28 LSRYQDQRIQATFTGGRQITGILKGFDQLMNLVLDDVEEQLRNPEDGKLTGAIRKLGLVV 87 L + + + G Q+ G + G D MN L V+ L+N E +L + Sbjct: 7 LMKLSHETVTIELKNGTQVHGTITGVDVSMNTHLKAVKMTLKNRE-------PVQLETLS 59 Query: 88 VRGTTL 93 +RG + Sbjct: 60 IRGNNI 65 >6ASO-H nrPDB Length = 115 Score = 33.9 bits (76), Expect = 0.016, Method: Composition-based stats. Identities = 15/77 (19%), Positives = 31/77 (40%), Gaps = 9/77 (11%) Query: 28 LSRYQDQRIQATFTGGRQITGILKGFDQLMNLVLDDVEEQLRNPEDGKLTGAIRKLGLVV 87 L Y ++R+ G + L GFD+ NL + +V ++ + Sbjct: 5 LKDYLNKRVVIIKVDGECLIASLNGFDKNTNLFITNVFNRI---------SKEFICKAQL 55 Query: 88 VRGTTLVLIAPMDGSEE 104 +RG+ + L+ +D + Sbjct: 56 LRGSEIALVGLIDAEND 72 >3JB9-F nrPDB Length = 117 Score = 33.1 bits (74), Expect = 0.025, Method: Composition-based stats. Identities = 11/66 (16%), Positives = 24/66 (36%), Gaps = 7/66 (10%) Query: 28 LSRYQDQRIQATFTGGRQITGILKGFDQLMNLVLDDVEEQLRNPEDGKLTGAIRKLGLVV 87 L + ++ + G + G + D MN L V+ ++ E + + Sbjct: 7 LMKLTNETVSIELKNGTIVHGTITSVDMQMNTHLKAVKMTVKGRE-------PVPVETLS 59 Query: 88 VRGTTL 93 +RG + Sbjct: 60 IRGNNI 65 >5L0W-A nrPDB Length = 184 Score = 29.3 bits (64), Expect = 0.42, Method: Composition-based stats. Identities = 7/27 (25%), Positives = 11/27 (40%) Query: 2 SSLQKRPGPGNSSQPTERPRKESILDL 28 +SL K+ G Q + R + L Sbjct: 14 TSLYKKAGENLYFQGSHLQRNIYLSLL 40 >5ES4-B nrPDB Length = 727 Score = 28.5 bits (62), Expect = 0.67, Method: Composition-based stats. Identities = 12/50 (24%), Positives = 19/50 (38%), Gaps = 2/50 (4%) Query: 3 SLQKRPGPGNSSQPTERPRKESILDLSRYQD--QRIQATFTGGRQITGIL 50 +L RPG + T R K +DL D + +++ G L Sbjct: 82 TLYLRPGQAAAFNVTFRRAKGYPIDLYYLMDLSYSMLDDLRNVKKLGGDL 131 >5E6S-B nrPDB Length = 510 Score = 28.5 bits (62), Expect = 0.67, Method: Composition-based stats. Identities = 12/50 (24%), Positives = 19/50 (38%), Gaps = 2/50 (4%) Query: 3 SLQKRPGPGNSSQPTERPRKESILDLSRYQD--QRIQATFTGGRQITGIL 50 +L RPG + T R K +DL D + +++ G L Sbjct: 82 TLYLRPGQAAAFNVTFRRAKGYPIDLYYLMDLSYSMLDDLRNVKKLGGDL 131 >1DBP-A nrPDB Length = 271 Score = 28.1 bits (61), Expect = 0.77, Method: Composition-based stats. Identities = 19/86 (22%), Positives = 34/86 (39%), Gaps = 13/86 (15%) Query: 22 KESILDLSRYQDQRIQATFTGGRQITGILKGFDQLMNLVLDDVEEQLRNPEDGKLTGAIR 81 K++I + + + G Q G+ NLV+ D + + Sbjct: 1 KDTIALVVSTLNNPFFVSLKDGAQKEADKLGY----NLVVLDSQ--------NNPAKELA 48 Query: 82 KLGLVVVRGTTLVLIAPMDGSEEIPN 107 + + VRGT ++LI P D S+ + N Sbjct: 49 NVQDLTVRGTKILLINPTD-SDAVDN 73 >4ZJP-A nrPDB Length = 292 Score = 28.1 bits (61), Expect = 0.85, Method: Composition-based stats. Identities = 17/93 (18%), Positives = 30/93 (32%), Gaps = 16/93 (17%) Query: 10 PGNSSQPTERPRKESILDLSRYQDQRIQATFTGGRQITGILKGFDQLMNLVLDDVEEQLR 69 Q +E+I D + G Q G+ LV+ D + Sbjct: 16 ENLYFQSM----QETIALTVSTLDNPFFVSLKDGAQKKATELGY----KLVVLDSQ---- 63 Query: 70 NPEDGKLTGAIRKLGLVVVRGTTLVLIAPMDGS 102 + + + + VRG ++LI P D + Sbjct: 64 ----NDPSKELSNVEDLTVRGAKVLLINPTDSA 92 >6ER0-A nrPDB Length = 127 Score = 28.1 bits (61), Expect = 0.94, Method: Composition-based stats. Identities = 12/56 (21%), Positives = 27/56 (48%) Query: 14 SQPTERPRKESILDLSRYQDQRIQATFTGGRQITGILKGFDQLMNLVLDDVEEQLR 69 S+ E + ++ ++ +++ R+ TG+L D +V D++EQL+ Sbjct: 59 SEKVVSISSEHLEPITPTKNNKVKVILGEDREATGVLLSIDGEDGIVRMDLDEQLK 114 >6OIX-A nrPDB Length = 505 Score = 27.8 bits (60), Expect = 1.0, Method: Composition-based stats. Identities = 11/45 (24%), Positives = 20/45 (44%) Query: 37 QATFTGGRQITGILKGFDQLMNLVLDDVEEQLRNPEDGKLTGAIR 81 + G R I+G+L+ + L++L L D E + + R Sbjct: 398 RLELQGYRVISGLLEIYRPLLSLSLSDFTELVEKERVKRFPIESR 442 >2O20-A nrPDB Length = 332 Score = 27.0 bits (58), Expect = 1.8, Method: Composition-based stats. Identities = 16/82 (19%), Positives = 34/82 (41%), Gaps = 20/82 (24%) Query: 46 ITGILKGFDQLM-----NLVLDDVEEQLRNPEDGKLTGAIRKLGLVVVRGTT-------- 92 I +G D + N++L + + + E T +++ +V G++ Sbjct: 78 FAAITRGVDDIASMYKYNMILANSDNDVEKEEKVLETFLSKQVDGIVYMGSSLDEKIRTS 137 Query: 93 -------LVLIAPMDGSEEIPN 107 +VL+ +DG +EIP+ Sbjct: 138 LKNSRTPVVLVGTIDGDKEIPS 159 >5SZD-A nrPDB Length = 83 Score = 27.0 bits (58), Expect = 1.8, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 23/42 (54%), Gaps = 1/42 (2%) Query: 22 KESILDLSRYQDQRIQATFTGGRQITGILKGFDQLMNLVLDD 63 +ES L+ +R + ++ G ++ G ++ FD ++L+D Sbjct: 9 QESFLNTARKKRVKVSVYLVNGVRLQGRIRSFDLF-TILLED 49 >5HS2-A nrPDB Length = 232 Score = 27.0 bits (58), Expect = 1.9, Method: Composition-based stats. Identities = 5/23 (21%), Positives = 8/23 (34%) Query: 34 QRIQATFTGGRQITGILKGFDQL 56 ++ G I L+ FD Sbjct: 21 NKLFIELKGDPVIIHTLRVFDSH 43 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.302 0.131 0.330 Lambda K H 0.267 0.0401 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 3,974,729 Number of Sequences: 36641 Number of extensions: 127775 Number of successful extensions: 399 Number of sequences better than 10.0: 69 Number of HSP's better than 10.0 without gapping: 112 Number of HSP's successfully gapped in prelim test: 15 Number of HSP's that attempted gapping in prelim test: 243 Number of HSP's gapped (non-prelim): 128 length of query: 113 length of database: 10,336,785 effective HSP length: 79 effective length of query: 34 effective length of database: 7,442,146 effective search space: 253032964 effective search space used: 253032964 T: 11 A: 40 X1: 16 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.3 bits) S2: 52 (24.7 bits)