BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= O60568 (738 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 6FXY-A nrPDB 1484 0.0 6AX6-A nrPDB 154 9e-38 3SV0-A nrPDB 31 1.5 2A5H-A nrPDB 30 2.9 3UGS-B nrPDB 30 4.3 4LXF-A nrPDB 30 4.5 4C7D-A nrPDB 29 6.0 1Y7E-A nrPDB 29 6.9 4AWE-A nrPDB 29 7.6 1V2X-A nrPDB 29 7.9 3NI8-A nrPDB 29 9.1 1OJ6-A nrPDB 29 9.3 >6FXY-A nrPDB Length = 718 Score = 1484 bits (3842), Expect = 0.0, Method: Compositional matrix adjust. Identities = 714/715 (99%), Positives = 715/715 (100%) Query: 24 ASDRPRGRDPVNPEKLLVITVATAETEGYLRFLRSAEFFNYTVRTLGLGEEWRGGDVART 83 +SDRPRGRDPVNPEKLLVITVATAETEGYLRFLRSAEFFNYTVRTLGLGEEWRGGDVART Sbjct: 1 SSDRPRGRDPVNPEKLLVITVATAETEGYLRFLRSAEFFNYTVRTLGLGEEWRGGDVART 60 Query: 84 VGGGQKVRWLKKEMEKYADREDMIIMFVDSYDVILAGSPTELLKKFVQSGSRLLFSAESF 143 VGGGQKVRWLKKEMEKYADREDMIIMFVDSYDVILAGSPTELLKKFVQSGSRLLFSAESF Sbjct: 61 VGGGQKVRWLKKEMEKYADREDMIIMFVDSYDVILAGSPTELLKKFVQSGSRLLFSAESF 120 Query: 144 CWPEWGLAEQYPEVGTGKRFLNSGGFIGFATTIHQIVRQWKYKDDDDDQLFYTRLYLDPG 203 CWPEWGLAEQYPEVGTGKRFLNSGGFIGFATTIHQIVRQWKYKDDDDDQLFYTRLYLDPG Sbjct: 121 CWPEWGLAEQYPEVGTGKRFLNSGGFIGFATTIHQIVRQWKYKDDDDDQLFYTRLYLDPG 180 Query: 204 LREKLSLNLDHKSRIFQNLNGALDEVVLKFDRNRVRIRNVAYDTLPIVVHGNGPTKLQLN 263 LREKLSLNLDHKSRIFQNLNGALDEVVLKFDRNRVRIRNVAYDTLPIVVHGNGPTKLQLN Sbjct: 181 LREKLSLNLDHKSRIFQNLNGALDEVVLKFDRNRVRIRNVAYDTLPIVVHGNGPTKLQLN 240 Query: 264 YLGNYVPNGWTPEGGCGFCNQDRRTLPGGQPPPRVFLAVFVEQPTPFLPRFLQRLLLLDY 323 YLGNYVPNGWTPEGGCGFCNQDRRTLPGGQPPPRVFLAVFVEQPTPFLPRFLQRLLLLDY Sbjct: 241 YLGNYVPNGWTPEGGCGFCNQDRRTLPGGQPPPRVFLAVFVEQPTPFLPRFLQRLLLLDY 300 Query: 324 PPDRVTLFLHNNEVFHEPHIADSWPQLQDHFSAVKLVGPEEALSPGEARDMAMDLCRQDP 383 PPDRVTLFLHNNEVFHEPHIADSWPQLQDHFSAVKLVGPEEALSPGEARDMAMDLCRQDP Sbjct: 301 PPDRVTLFLHNNEVFHEPHIADSWPQLQDHFSAVKLVGPEEALSPGEARDMAMDLCRQDP 360 Query: 384 ECEFYFSLDADAVLTNLQTLRILIEENRKVIAPMLSRHGKLWSNFWGALSPDEYYARSED 443 ECEFYFSLDADAVLTNLQTLRILIEENRKVIAPMLSRHGKLWSNFWGALSPDEYYARSED Sbjct: 361 ECEFYFSLDADAVLTNLQTLRILIEENRKVIAPMLSRHGKLWSNFWGALSPDEYYARSED 420 Query: 444 YVELVQRKRVGVWNVPYISQAYVIRGDTLRMELPQRDVFSGSDTDPDMAFCKSFRDKGIF 503 YVELVQRKRVGVWNVPYISQAYVIRGDTLRMELPQRDVFSGSDTDPDMAFCKSFRDKGIF Sbjct: 421 YVELVQRKRVGVWNVPYISQAYVIRGDTLRMELPQRDVFSGSDTDPDMAFCKSFRDKGIF 480 Query: 504 LHLSNQHEFGRLLATSRYDTEHLHPDLWQIFDNPVDWKEQYIHENYSRALEGEGIVEQPC 563 LHLSNQHEFGRLLATSRYDTEHLHPDLWQIFDNPVDWKEQYIHENYSRALEGEGIVEQPC Sbjct: 481 LHLSNQHEFGRLLATSRYDTEHLHPDLWQIFDNPVDWKEQYIHENYSRALEGEGIVEQPC 540 Query: 564 PDVYWFPLLSEQMCDELVAEMEHYGQWSGGRHEDSRLAGGYENVPTVDIHMKQVGYEDQW 623 PDVYWFPLLSEQMCDELVAEMEHYGQWSGGRHEDSRLAGGYENVPTVDIHMKQVGYEDQW Sbjct: 541 PDVYWFPLLSEQMCDELVAEMEHYGQWSGGRHEDSRLAGGYENVPTVDIHMKQVGYEDQW 600 Query: 624 LQLLRTYVGPMTESLFPGYHTKARAVMNFVVRYRPDEQPSLRPHHDSSTFTLNVALNHKG 683 LQLLRTYVGPMTESLFPGYHTKARAVMNFVVRYRPDEQPSLRPHHDSSTFTLNVALNHKG Sbjct: 601 LQLLRTYVGPMTESLFPGYHTKARAVMNFVVRYRPDEQPSLRPHHDSSTFTLNVALNHKG 660 Query: 684 LDYEGGGCRFLRYDCVISSPRKGWALLHPGRLTHYHEGLPTTWGTRYIMVSFVDP 738 LDYEGGGCRFLRYDCVISSPRKGWALLHPGRLTHYHEGLPTTWGTRYIMVSFVDP Sbjct: 661 LDYEGGGCRFLRYDCVISSPRKGWALLHPGRLTHYHEGLPTTWGTRYIMVSFVDP 715 >6AX6-A nrPDB Length = 235 Score = 154 bits (390), Expect = 9e-38, Method: Compositional matrix adjust. Identities = 83/217 (38%), Positives = 122/217 (56%), Gaps = 9/217 (4%) Query: 528 PDLWQIFDNPV---DWKEQYIHENYSRALEG--EGIVEQPCPDVYWFPLLSEQMCDELVA 582 P ++D P +W+++Y+H + L+ + + C DVY FPL + C E++ Sbjct: 21 PTEVTLYDLPTRKEEWEKKYLHPEFLSHLQNFKDFDYTEICNDVYSFPLFTPAFCKEVIE 80 Query: 583 EMEHYGQWSGG--RHEDSRLAGGYENVPTVDIHMKQVGYEDQWLQLLRTYVGPMTESLFP 640 M+ WS G + D R+ GG E+ PT D + +VG + QW ++ YV P L+ Sbjct: 81 VMDKANLWSKGGDSYFDPRI-GGVESYPTQDTQLYEVGLDKQWHYVVFNYVAPFVRHLYN 139 Query: 641 GYHTKARAVMNFVVRYRPDEQPSLRPHHDSSTFTLNVALNHKGLDYEGGGCRFLRYDCVI 700 Y TK + FVV+Y + Q L PHHDSST+TLN+ALN G +Y GGC F+R+ + Sbjct: 140 NYKTK-DINLAFVVKYDMERQSELAPHHDSSTYTLNIALNEYGKEYTAGGCEFIRHKFIW 198 Query: 701 SSPRKGWALLHPGRLTHYHEGLPTTWGTRYIMVSFVD 737 + G+A +H G+L YH LP T G RYI+VSFV+ Sbjct: 199 QGQKVGYATIHAGKLLAYHRALPITSGKRYILVSFVN 235 >3SV0-A nrPDB Length = 483 Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust. Identities = 38/154 (24%), Positives = 58/154 (37%), Gaps = 23/154 (14%) Query: 156 EVGTGKRFLNSGGFIGFATTIHQIVRQWKYKDDDDDQLFYTRLYLDPGLREKLSLNLDHK 215 +V T L G FA+ H R ++ DD D + RL+ D +RE + Sbjct: 232 KVATSIEALCRGYPTEFASYFH-YCRSLRF-DDKPDYSYLKRLFRDLFIREGFQFDY--- 286 Query: 216 SRIFQNLNGALDEVVLKFDRNRVRIRNVAYDTLPIVVHGNGPTKLQLNYLGNYVPNGWTP 275 D +LK+ ++++ A V HG GP+ L L N +G Sbjct: 287 ---------VFDWTILKYQQSQI-----ASAPPRAVGHGAGPSGLAPPALQNDRQSGVDE 332 Query: 276 EGGCGFCNQDRRTLPGGQPPPRVFLAVFVEQPTP 309 G+ + DRR PPP + +Q P Sbjct: 333 GRTSGWSSMDRRR----APPPIASVGTLAKQKAP 362 >2A5H-A nrPDB Length = 416 Score = 30.4 bits (67), Expect = 2.9, Method: Compositional matrix adjust. Identities = 23/89 (25%), Positives = 35/89 (39%), Gaps = 11/89 (12%) Query: 325 PDRVTLFLHNNEVFHEPHIADSWPQLQDHFSAVKLVGPEEALSPGEARDMAMDLCRQDPE 384 PDRV L I D H + + G + P E D A+D R P+ Sbjct: 114 PDRVLLL-----------ITDMCSMYCRHCTRRRFAGQSDDSMPMERIDKAIDYIRNTPQ 162 Query: 385 CEFYFSLDADAVLTNLQTLRILIEENRKV 413 DA+L + +TL +I + R++ Sbjct: 163 VRDVLLSGGDALLVSDETLEYIIAKLREI 191 >3UGS-B nrPDB Length = 225 Score = 30.0 bits (66), Expect = 4.3, Method: Composition-based stats. Identities = 12/27 (44%), Positives = 19/27 (70%) Query: 218 IFQNLNGALDEVVLKFDRNRVRIRNVA 244 IF+ L+ LDE + KF++N VR+R + Sbjct: 74 IFELLDRCLDEALEKFEKNNVRLRAIG 100 >4LXF-A nrPDB Length = 620 Score = 29.6 bits (65), Expect = 4.5, Method: Compositional matrix adjust. Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 9/85 (10%) Query: 230 VLKFDRNRVRIRNVAYDTLP---IVVHGNGPTKLQLNYLGNY----VPNGWTPEGGCGF- 281 +L DRN++ + +LP ++ +G+ + +LG+ +P WTP+ GF Sbjct: 407 LLDNDRNQIELFTALLLSLPGSPVLYYGDEIGMGDVIWLGDRDGVRIPMQWTPDRNAGFS 466 Query: 282 -CNQDRRTLPGGQPPPRVFLAVFVE 305 N R LP Q P + AV VE Sbjct: 467 TANPGRLYLPPSQDPVYGYQAVNVE 491 >4C7D-A nrPDB Length = 494 Score = 29.3 bits (64), Expect = 6.0, Method: Compositional matrix adjust. Identities = 39/148 (26%), Positives = 55/148 (37%), Gaps = 35/148 (23%) Query: 248 LPIVVHGNGPTKLQLNYLGNYVPNGWTPEGGCGFCNQDRRTLPG---GQPPPRVFLAVFV 304 LP+ HG+G +L+L G Y G+ + G R G G R L V Sbjct: 58 LPVTSHGHGGIRLRLAE-GPYGDEGYRLDSGREGVTITARKAAGLFHGVQTLRQLLPAAV 116 Query: 305 E----QPTPFL---------PRFLQRLLLLDYPP------------DRVTLFLHNNEVFH 339 E QP P+L PR+ R +LD DRV L+ +N H Sbjct: 117 EKDSAQPGPWLVAGGTIEDTPRYAWRSAMLDVSRHFFSVDEVKRYIDRVALYKYNKLHLH 176 Query: 340 EPH------IADSWPQLQDHFSAVKLVG 361 DSWP+L + + ++ G Sbjct: 177 ISDDQGWRLAIDSWPRLATYGGSTEVGG 204 >1Y7E-A nrPDB Length = 458 Score = 29.3 bits (64), Expect = 6.9, Method: Compositional matrix adjust. Identities = 17/42 (40%), Positives = 22/42 (52%) Query: 45 ATAETEGYLRFLRSAEFFNYTVRTLGLGEEWRGGDVARTVGG 86 A AE Y+R L + + V TLG EE GG VA+ + G Sbjct: 377 ADAELVSYIRQLLNKNNIAWQVATLGKVEEGGGGTVAKFLAG 418 >4AWE-A nrPDB Length = 387 Score = 28.9 bits (63), Expect = 7.6, Method: Compositional matrix adjust. Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 5/48 (10%) Query: 503 FLHLSNQHEFGRLLATSRYD--TEHLHPDLWQIFDNPVDWKEQYIHEN 548 F + ++ +F R L D T HL+PD W ++W Q+IH++ Sbjct: 242 FYNGADGGDFDRELGLRNVDFGTMHLYPDWWS---KSIEWSNQWIHDH 286 >1V2X-A nrPDB Length = 194 Score = 28.9 bits (63), Expect = 7.9, Method: Compositional matrix adjust. Identities = 28/116 (24%), Positives = 49/116 (42%), Gaps = 10/116 (8%) Query: 138 FSAESFCWPEWGLAEQYPEVGTGKRFLNSGGFIGFATTIHQIVRQWKYKD--DDDDQLFY 195 F+ S +W +P++ RFL GF +AT + + R ++ D LF Sbjct: 63 FNETSGGSHKWVYLRVHPDLHEAFRFLKERGFTVYATALREDARDFREVDYTKPTAVLFG 122 Query: 196 TRLYLDPGLREKLSLNLDHKSRI-----FQNLNGALDEVVLKFDRNRVRIRNVAYD 246 + G+ E+ D +I Q+LN ++ V+ F+ R R++ YD Sbjct: 123 AEKW---GVSEEALALADGAIKIPMLGMVQSLNVSVAAAVILFEAQRQRLKAGLYD 175 >3NI8-A nrPDB Length = 158 Score = 28.9 bits (63), Expect = 9.1, Method: Composition-based stats. Identities = 19/41 (46%), Positives = 25/41 (60%), Gaps = 4/41 (9%) Query: 150 LAEQYPEVGTGKRFLNSGGFIGFATTI---HQIVRQWKYKD 187 LAE +VG GK L SG +G T I H+IV +WK++D Sbjct: 52 LAEVDLKVG-GKFSLFSGSILGEFTEITKPHKIVEKWKFRD 91 >1OJ6-A nrPDB Length = 151 Score = 28.9 bits (63), Expect = 9.3, Method: Compositional matrix adjust. Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 2/47 (4%) Query: 314 FLQRLLLLDYPPDRVTLFLHNNEVFHEPHIADSWPQLQDHFSAVKLV 360 RL L+ PD + LF +N F P + S P+ DH V LV Sbjct: 27 LFARLFALE--PDLLPLFQYNGRQFSSPEDSLSSPEFLDHIRKVMLV 71 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 6FXY-A nrPDB 1499 0.0 6AX6-A nrPDB 348 4e-96 Sequences not found previously or not previously below threshold: 3SV0-A nrPDB 33 0.44 5UM0-A nrPDB 31 1.4 4Q1A-A nrPDB 31 1.9 3PGJ-A nrPDB 31 2.2 4LXF-A nrPDB 30 2.7 2A30-A nrPDB 30 2.9 3UGS-B nrPDB 30 3.6 5YHS-A nrPDB 30 3.6 1OJ6-A nrPDB 30 3.7 3O8N-A nrPDB 29 6.5 4C7D-A nrPDB 29 7.0 3OEC-A nrPDB 29 7.3 2IUW-A nrPDB 29 7.3 CONVERGED! >6FXY-A nrPDB Length = 718 Score = 1499 bits (3881), Expect = 0.0, Method: Composition-based stats. Identities = 714/715 (99%), Positives = 715/715 (100%) Query: 24 ASDRPRGRDPVNPEKLLVITVATAETEGYLRFLRSAEFFNYTVRTLGLGEEWRGGDVART 83 +SDRPRGRDPVNPEKLLVITVATAETEGYLRFLRSAEFFNYTVRTLGLGEEWRGGDVART Sbjct: 1 SSDRPRGRDPVNPEKLLVITVATAETEGYLRFLRSAEFFNYTVRTLGLGEEWRGGDVART 60 Query: 84 VGGGQKVRWLKKEMEKYADREDMIIMFVDSYDVILAGSPTELLKKFVQSGSRLLFSAESF 143 VGGGQKVRWLKKEMEKYADREDMIIMFVDSYDVILAGSPTELLKKFVQSGSRLLFSAESF Sbjct: 61 VGGGQKVRWLKKEMEKYADREDMIIMFVDSYDVILAGSPTELLKKFVQSGSRLLFSAESF 120 Query: 144 CWPEWGLAEQYPEVGTGKRFLNSGGFIGFATTIHQIVRQWKYKDDDDDQLFYTRLYLDPG 203 CWPEWGLAEQYPEVGTGKRFLNSGGFIGFATTIHQIVRQWKYKDDDDDQLFYTRLYLDPG Sbjct: 121 CWPEWGLAEQYPEVGTGKRFLNSGGFIGFATTIHQIVRQWKYKDDDDDQLFYTRLYLDPG 180 Query: 204 LREKLSLNLDHKSRIFQNLNGALDEVVLKFDRNRVRIRNVAYDTLPIVVHGNGPTKLQLN 263 LREKLSLNLDHKSRIFQNLNGALDEVVLKFDRNRVRIRNVAYDTLPIVVHGNGPTKLQLN Sbjct: 181 LREKLSLNLDHKSRIFQNLNGALDEVVLKFDRNRVRIRNVAYDTLPIVVHGNGPTKLQLN 240 Query: 264 YLGNYVPNGWTPEGGCGFCNQDRRTLPGGQPPPRVFLAVFVEQPTPFLPRFLQRLLLLDY 323 YLGNYVPNGWTPEGGCGFCNQDRRTLPGGQPPPRVFLAVFVEQPTPFLPRFLQRLLLLDY Sbjct: 241 YLGNYVPNGWTPEGGCGFCNQDRRTLPGGQPPPRVFLAVFVEQPTPFLPRFLQRLLLLDY 300 Query: 324 PPDRVTLFLHNNEVFHEPHIADSWPQLQDHFSAVKLVGPEEALSPGEARDMAMDLCRQDP 383 PPDRVTLFLHNNEVFHEPHIADSWPQLQDHFSAVKLVGPEEALSPGEARDMAMDLCRQDP Sbjct: 301 PPDRVTLFLHNNEVFHEPHIADSWPQLQDHFSAVKLVGPEEALSPGEARDMAMDLCRQDP 360 Query: 384 ECEFYFSLDADAVLTNLQTLRILIEENRKVIAPMLSRHGKLWSNFWGALSPDEYYARSED 443 ECEFYFSLDADAVLTNLQTLRILIEENRKVIAPMLSRHGKLWSNFWGALSPDEYYARSED Sbjct: 361 ECEFYFSLDADAVLTNLQTLRILIEENRKVIAPMLSRHGKLWSNFWGALSPDEYYARSED 420 Query: 444 YVELVQRKRVGVWNVPYISQAYVIRGDTLRMELPQRDVFSGSDTDPDMAFCKSFRDKGIF 503 YVELVQRKRVGVWNVPYISQAYVIRGDTLRMELPQRDVFSGSDTDPDMAFCKSFRDKGIF Sbjct: 421 YVELVQRKRVGVWNVPYISQAYVIRGDTLRMELPQRDVFSGSDTDPDMAFCKSFRDKGIF 480 Query: 504 LHLSNQHEFGRLLATSRYDTEHLHPDLWQIFDNPVDWKEQYIHENYSRALEGEGIVEQPC 563 LHLSNQHEFGRLLATSRYDTEHLHPDLWQIFDNPVDWKEQYIHENYSRALEGEGIVEQPC Sbjct: 481 LHLSNQHEFGRLLATSRYDTEHLHPDLWQIFDNPVDWKEQYIHENYSRALEGEGIVEQPC 540 Query: 564 PDVYWFPLLSEQMCDELVAEMEHYGQWSGGRHEDSRLAGGYENVPTVDIHMKQVGYEDQW 623 PDVYWFPLLSEQMCDELVAEMEHYGQWSGGRHEDSRLAGGYENVPTVDIHMKQVGYEDQW Sbjct: 541 PDVYWFPLLSEQMCDELVAEMEHYGQWSGGRHEDSRLAGGYENVPTVDIHMKQVGYEDQW 600 Query: 624 LQLLRTYVGPMTESLFPGYHTKARAVMNFVVRYRPDEQPSLRPHHDSSTFTLNVALNHKG 683 LQLLRTYVGPMTESLFPGYHTKARAVMNFVVRYRPDEQPSLRPHHDSSTFTLNVALNHKG Sbjct: 601 LQLLRTYVGPMTESLFPGYHTKARAVMNFVVRYRPDEQPSLRPHHDSSTFTLNVALNHKG 660 Query: 684 LDYEGGGCRFLRYDCVISSPRKGWALLHPGRLTHYHEGLPTTWGTRYIMVSFVDP 738 LDYEGGGCRFLRYDCVISSPRKGWALLHPGRLTHYHEGLPTTWGTRYIMVSFVDP Sbjct: 661 LDYEGGGCRFLRYDCVISSPRKGWALLHPGRLTHYHEGLPTTWGTRYIMVSFVDP 715 >6AX6-A nrPDB Length = 235 Score = 348 bits (894), Expect = 4e-96, Method: Composition-based stats. Identities = 83/217 (38%), Positives = 122/217 (56%), Gaps = 9/217 (4%) Query: 528 PDLWQIFDNPV---DWKEQYIHENYSRALEG--EGIVEQPCPDVYWFPLLSEQMCDELVA 582 P ++D P +W+++Y+H + L+ + + C DVY FPL + C E++ Sbjct: 21 PTEVTLYDLPTRKEEWEKKYLHPEFLSHLQNFKDFDYTEICNDVYSFPLFTPAFCKEVIE 80 Query: 583 EMEHYGQWSGG--RHEDSRLAGGYENVPTVDIHMKQVGYEDQWLQLLRTYVGPMTESLFP 640 M+ WS G + D R+ GG E+ PT D + +VG + QW ++ YV P L+ Sbjct: 81 VMDKANLWSKGGDSYFDPRI-GGVESYPTQDTQLYEVGLDKQWHYVVFNYVAPFVRHLYN 139 Query: 641 GYHTKARAVMNFVVRYRPDEQPSLRPHHDSSTFTLNVALNHKGLDYEGGGCRFLRYDCVI 700 Y TK + FVV+Y + Q L PHHDSST+TLN+ALN G +Y GGC F+R+ + Sbjct: 140 NYKTK-DINLAFVVKYDMERQSELAPHHDSSTYTLNIALNEYGKEYTAGGCEFIRHKFIW 198 Query: 701 SSPRKGWALLHPGRLTHYHEGLPTTWGTRYIMVSFVD 737 + G+A +H G+L YH LP T G RYI+VSFV+ Sbjct: 199 QGQKVGYATIHAGKLLAYHRALPITSGKRYILVSFVN 235 >3SV0-A nrPDB Length = 483 Score = 33.0 bits (74), Expect = 0.44, Method: Composition-based stats. Identities = 38/154 (24%), Positives = 58/154 (37%), Gaps = 23/154 (14%) Query: 156 EVGTGKRFLNSGGFIGFATTIHQIVRQWKYKDDDDDQLFYTRLYLDPGLREKLSLNLDHK 215 +V T L G FA+ H R ++ DD D + RL+ D +RE + Sbjct: 232 KVATSIEALCRGYPTEFASYFH-YCRSLRF-DDKPDYSYLKRLFRDLFIREGFQFDY--- 286 Query: 216 SRIFQNLNGALDEVVLKFDRNRVRIRNVAYDTLPIVVHGNGPTKLQLNYLGNYVPNGWTP 275 D +LK+ ++++ A V HG GP+ L L N +G Sbjct: 287 ---------VFDWTILKYQQSQI-----ASAPPRAVGHGAGPSGLAPPALQNDRQSGVDE 332 Query: 276 EGGCGFCNQDRRTLPGGQPPPRVFLAVFVEQPTP 309 G+ + DRR PPP + +Q P Sbjct: 333 GRTSGWSSMDRRR----APPPIASVGTLAKQKAP 362 >5UM0-A nrPDB Length = 235 Score = 31.5 bits (70), Expect = 1.4, Method: Composition-based stats. Identities = 31/137 (22%), Positives = 58/137 (42%), Gaps = 14/137 (10%) Query: 145 WPEWGLAEQ-YPEVGTGKRFLNSGGF---IGFATTIHQIVRQWKYKDDDDDQLFYTRLYL 200 W + L+EQ E + L G+ I F + + + ++ ++ DQLF ++ Sbjct: 30 WRDVKLSEQGLAEAAAAGKKLKENGYEFDIAFTSVLTRAIKTCNIVLEESDQLFVPQI-- 87 Query: 201 DPGLREKLSLNLDHKSRIFQNLNGALDEVVLKFDRNRVRIRNVAYDTLPIVVHGNGPTKL 260 + LN H R+ Q L+ + K+ +VRI +YDTLP ++ + Sbjct: 88 -----KTWRLNERHYGRL-QGLDK--KQTAEKYGDEQVRIWRRSYDTLPPLLDKDDAFSA 139 Query: 261 QLNYLGNYVPNGWTPEG 277 + ++P P+G Sbjct: 140 HKDRRYAHLPADVVPDG 156 >4Q1A-A nrPDB Length = 280 Score = 31.1 bits (69), Expect = 1.9, Method: Composition-based stats. Identities = 11/45 (24%), Positives = 27/45 (60%), Gaps = 4/45 (8%) Query: 515 LLATSRYDTEHLHPDLWQIFDNPVDWKEQYIHENYSRALEGEGIV 559 + A++ Y++E ++ W I+ + DW ++ + ++LE +GI+ Sbjct: 156 IFASNLYESESMNETEWTIYQDWHDW----MNNQFGQSLELDGII 196 >3PGJ-A nrPDB Length = 302 Score = 30.7 bits (68), Expect = 2.2, Method: Composition-based stats. Identities = 20/91 (21%), Positives = 38/91 (41%), Gaps = 8/91 (8%) Query: 529 DLWQIFDNPVDWKEQ-YIHENYSRALEGEGIVEQPCPDVYWFPLLSEQM-------CDEL 580 D + +F NP++ + +IH ++R + I C V F ++ C+ Sbjct: 30 DQYAVFGNPINHSKSPFIHTLFARQTQQSMIYTAQCVPVDGFTEAAKHFFAQGGRGCNVT 89 Query: 581 VAEMEHYGQWSGGRHEDSRLAGGYENVPTVD 611 V E +++ E +RLAG + +D Sbjct: 90 VPFKEEAYRFADRLTERARLAGAVNTLKKLD 120 >4LXF-A nrPDB Length = 620 Score = 30.3 bits (67), Expect = 2.7, Method: Composition-based stats. Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 9/85 (10%) Query: 230 VLKFDRNRVRIRNVAYDTLP---IVVHGNGPTKLQLNYLGNY----VPNGWTPEGGCGF- 281 +L DRN++ + +LP ++ +G+ + +LG+ +P WTP+ GF Sbjct: 407 LLDNDRNQIELFTALLLSLPGSPVLYYGDEIGMGDVIWLGDRDGVRIPMQWTPDRNAGFS 466 Query: 282 -CNQDRRTLPGGQPPPRVFLAVFVE 305 N R LP Q P + AV VE Sbjct: 467 TANPGRLYLPPSQDPVYGYQAVNVE 491 >2A30-A nrPDB Length = 248 Score = 30.3 bits (67), Expect = 2.9, Method: Composition-based stats. Identities = 11/45 (24%), Positives = 27/45 (60%), Gaps = 4/45 (8%) Query: 515 LLATSRYDTEHLHPDLWQIFDNPVDWKEQYIHENYSRALEGEGIV 559 + A++ Y++E ++ W I+ + DW ++ + ++LE +GI+ Sbjct: 124 IFASNLYESECMNETEWTIYQDWHDW----MNNQFGQSLELDGII 164 >3UGS-B nrPDB Length = 225 Score = 29.9 bits (66), Expect = 3.6, Method: Composition-based stats. Identities = 12/27 (44%), Positives = 19/27 (70%) Query: 218 IFQNLNGALDEVVLKFDRNRVRIRNVA 244 IF+ L+ LDE + KF++N VR+R + Sbjct: 74 IFELLDRCLDEALEKFEKNNVRLRAIG 100 >5YHS-A nrPDB Length = 475 Score = 29.9 bits (66), Expect = 3.6, Method: Composition-based stats. Identities = 11/55 (20%), Positives = 19/55 (34%), Gaps = 2/55 (3%) Query: 569 FPLLSEQMCDELVAEMEHYGQWSGGRHEDSRLAGGYENVPTVDIHMKQVGYEDQW 623 P S E + H ++ + D L G Y + +K+ G+ W Sbjct: 222 LPAYSVDDQKENIQAANHANEYETYWYYDPILKGEYPSYVVQ--QLKEKGWTPNW 274 >1OJ6-A nrPDB Length = 151 Score = 29.9 bits (66), Expect = 3.7, Method: Composition-based stats. Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 2/44 (4%) Query: 317 RLLLLDYPPDRVTLFLHNNEVFHEPHIADSWPQLQDHFSAVKLV 360 RL L+ PD + LF +N F P + S P+ DH V LV Sbjct: 30 RLFALE--PDLLPLFQYNGRQFSSPEDSLSSPEFLDHIRKVMLV 71 >3O8N-A nrPDB Length = 762 Score = 29.2 bits (64), Expect = 6.5, Method: Composition-based stats. Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 3/57 (5%) Query: 235 RNRVRIRNVAYDTLPIVVHG-NGPTKLQLNYLGNYVPNGWTPEGGCGFCNQDRRTLP 290 R+ VRI + + + +V G GP K Q+ G GWT +GG + +RTLP Sbjct: 420 RSTVRIGLIQGNRVLVVHDGFEGPAKGQIEEAGWSYVGGWTGQGGSKLGS--KRTLP 474 >4C7D-A nrPDB Length = 494 Score = 29.2 bits (64), Expect = 7.0, Method: Composition-based stats. Identities = 39/148 (26%), Positives = 55/148 (37%), Gaps = 35/148 (23%) Query: 248 LPIVVHGNGPTKLQLNYLGNYVPNGWTPEGGCGFCNQDRRTLPG---GQPPPRVFLAVFV 304 LP+ HG+G +L+L G Y G+ + G R G G R L V Sbjct: 58 LPVTSHGHGGIRLRLAE-GPYGDEGYRLDSGREGVTITARKAAGLFHGVQTLRQLLPAAV 116 Query: 305 E----QPTPFL---------PRFLQRLLLLDYPP------------DRVTLFLHNNEVFH 339 E QP P+L PR+ R +LD DRV L+ +N H Sbjct: 117 EKDSAQPGPWLVAGGTIEDTPRYAWRSAMLDVSRHFFSVDEVKRYIDRVALYKYNKLHLH 176 Query: 340 EPH------IADSWPQLQDHFSAVKLVG 361 DSWP+L + + ++ G Sbjct: 177 ISDDQGWRLAIDSWPRLATYGGSTEVGG 204 >3OEC-A nrPDB Length = 317 Score = 29.2 bits (64), Expect = 7.3, Method: Composition-based stats. Identities = 15/43 (34%), Positives = 26/43 (60%), Gaps = 6/43 (13%) Query: 374 MAMDLCRQDPECEFYFSLDADAVLTNL-QTLRILIEENRKVIA 415 +A+DLCRQ P ++ A L +T+R++ E+ R++IA Sbjct: 74 VAIDLCRQQPNLDY-----AQGSPEELKETVRLVEEQGRRIIA 111 >2IUW-A nrPDB Length = 238 Score = 29.2 bits (64), Expect = 7.3, Method: Composition-based stats. Identities = 25/131 (19%), Positives = 41/131 (31%), Gaps = 19/131 (14%) Query: 537 PVDWKEQYIHENYSRALEGEGIVEQPCPDVYWFPLLSEQMCDELVAEMEHYGQWSGGRHE 596 P ++ + E + I+EQ C DV W + G ++ Sbjct: 36 PTGVSRVCLYPGFVDVKEADWILEQLCQDVPW---------------KQRTGIREDITYQ 80 Query: 597 DSRLAGGYENVPTVDIHMKQVGYEDQWLQLLRTY---VGPMTESLFPGYHTKARAVMNFV 653 RL Y +P + + W +LRT + T F Sbjct: 81 QPRLTAWYGELPYTYSRI-TMEPNPHWHPVLRTLKNRIEENTGHTFNSLLCNLYRNEKDS 139 Query: 654 VRYRPDEQPSL 664 V + D++PSL Sbjct: 140 VDWHSDDEPSL 150 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.313 0.143 0.461 Lambda K H 0.267 0.0440 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 36,366,886 Number of Sequences: 36641 Number of extensions: 1774884 Number of successful extensions: 3673 Number of sequences better than 10.0: 17 Number of HSP's better than 10.0 without gapping: 9 Number of HSP's successfully gapped in prelim test: 20 Number of HSP's that attempted gapping in prelim test: 3656 Number of HSP's gapped (non-prelim): 29 length of query: 738 length of database: 10,336,785 effective HSP length: 104 effective length of query: 634 effective length of database: 6,526,121 effective search space: 4137560714 effective search space used: 4137560714 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.3 bits) S2: 63 (28.8 bits)