BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= O60563 (726 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 6GZH-B nrPDB 1500 0.0 2PK2-A nrPDB 602 e-172 3MIA-B nrPDB 572 e-163 2IVX-A nrPDB 452 e-127 4NST-B nrPDB 151 1e-36 4F7N-B nrPDB 64 2e-10 3DDQ-B nrPDB 38 0.019 1QZF-A nrPDB 36 0.063 1ZP2-A nrPDB 35 0.15 5T5H-u nrPDB 32 0.93 1YFM-A nrPDB 31 1.6 1KXU-A nrPDB 31 1.6 5X6O-G nrPDB 30 2.8 4RM4-A nrPDB 30 5.3 3TR4-A nrPDB 30 5.3 >6GZH-B nrPDB Length = 726 Score = 1500 bits (3884), Expect = 0.0, Method: Compositional matrix adjust. Identities = 723/726 (99%), Positives = 724/726 (99%) Query: 1 MEGERKNNNKRWYFTREQLENSPSRRFGVDPDKELSYRQQAANLLQDMGQRLNVSQLTIN 60 MEGERKNNNKRWYFTREQLENSPSRRFGVDPDKELSYRQQAANLLQDMGQRLNVSQLTIN Sbjct: 1 MEGERKNNNKRWYFTREQLENSPSRRFGVDPDKELSYRQQAANLLQDMGQRLNVSQLTIN 60 Query: 61 TAIVYMHRFYMIQSFTQFPGNSVAPAALFLAAKVEEQPKKLEHVIKVAHTCLHPQESLPD 120 TAIVYMHRFYMIQSFT+FPGNSVAPAALFLAAKVE QPKKLEHVIKVAHTCLHPQESLPD Sbjct: 61 TAIVYMHRFYMIQSFTRFPGNSVAPAALFLAAKVEGQPKKLEHVIKVAHTCLHPQESLPD 120 Query: 121 TRSEAYLQQVQDLVILESIILQTLGFELTIDHPHTHVVKCTQLVRASKDLAQTSYFMATN 180 TRSEAYLQQVQDLVILESIILQTLGFELTIDHPHTHVVKCTQLVRASKDLAQTSYFMATN Sbjct: 121 TRSEAYLQQVQDLVILESIILQTLGFELTIDHPHTHVVKCTQLVRASKDLAQTSYFMATN 180 Query: 181 SLHLTTFSLQYTPPVVACVCIHLACKWSNWEIPVSTDGKHWWEYVDATVTLELLDELTHE 240 SLHLTTFSLQYTPPVVACVCIHLACKWSNWEIPVSTDGKHWWEYVDATVTLELLDELTHE Sbjct: 181 SLHLTTFSLQYTPPVVACVCIHLACKWSNWEIPVSTDGKHWWEYVDATVTLELLDELTHE 240 Query: 241 FLQILEKTPNRLKRIWNWRACEAAKKTKADDRGTDEKTSEQTILNMISQSSSDTTIAGLM 300 LQILEKTPNRLKRIWNWRACEAAKKTKADDRGTDEKTSEQTILNMISQSSSDTTIAGLM Sbjct: 241 LLQILEKTPNRLKRIWNWRACEAAKKTKADDRGTDEKTSEQTILNMISQSSSDTTIAGLM 300 Query: 301 SMSTSTTSAVPSLPVSEESSSNLTSVEMLPGKRWLSSQPSFKLEPTQGHRTSENLALTGV 360 SMSTSTTSAVPSLPVSEESSSNLTSVEMLPGKRWLSSQPSFKLEPTQGHRTSENLALTGV Sbjct: 301 SMSTSTTSAVPSLPVSEESSSNLTSVEMLPGKRWLSSQPSFKLEPTQGHRTSENLALTGV 360 Query: 361 DHSLPQDGSNAFISQKQNSKSVPSAKVSLKEYRAKHAEELAAQKRQLENMEANVKSQYAY 420 DHSLPQDGSNAFISQKQNSKSVPSAKVSLKEYRAKHAEELAAQKRQLENMEANVKSQYAY Sbjct: 361 DHSLPQDGSNAFISQKQNSKSVPSAKVSLKEYRAKHAEELAAQKRQLENMEANVKSQYAY 420 Query: 421 AAQNLLSHHDSHSSVILKMPIEGSENPERPFLEKADKTALKMRIPVAGGDKAASSKPEEI 480 AAQNLLSHHDSHSSVILKMPIEGSENPERPFLEKADKTALKMRIPVAGGDKAASSKPEEI Sbjct: 421 AAQNLLSHHDSHSSVILKMPIEGSENPERPFLEKADKTALKMRIPVAGGDKAASSKPEEI 480 Query: 481 KMRIKVHAAADKHNSVEDSVTKSREHKEKHKTHPSNHHHHHNHHSHKHSHSQLPVGTGNK 540 KMRIKVHAAADKHNSVEDSVTKSREHKEKHKTHPSNHHHHHNHHSHKHSHSQLPVGTGNK Sbjct: 481 KMRIKVHAAADKHNSVEDSVTKSREHKEKHKTHPSNHHHHHNHHSHKHSHSQLPVGTGNK 540 Query: 541 RPGDPKHSSQTSNLAHKTYSLSSSFSSSSSTRKRGPSEETGGAVFDHPAKIAKSTKSSSL 600 RPGDPKHSSQTSNLAHKTYSLSSSFSSSSSTRKRGPSEETGGAVFDHPAKIAKSTKSSSL Sbjct: 541 RPGDPKHSSQTSNLAHKTYSLSSSFSSSSSTRKRGPSEETGGAVFDHPAKIAKSTKSSSL 600 Query: 601 NFSFPSLPTMGQMPGHSSDTSGLSFSQPSCKTRVPHSKLDKGPTGANGHNTTQTIDYQDT 660 NFSFPSLPTMGQMPGHSSDTSGLSFSQPSCKTRVPHSKLDKGPTGANGHNTTQTIDYQDT Sbjct: 601 NFSFPSLPTMGQMPGHSSDTSGLSFSQPSCKTRVPHSKLDKGPTGANGHNTTQTIDYQDT 660 Query: 661 VNMLHSLLSAQGVQPTQPTAFEFVRPYSDYLNPRSGGISSRSGNTDKPRPPPLPSEPPPP 720 VNMLHSLLSAQGVQPTQPTAFEFVRPYSDYLNPRSGGISSRSGNTDKPRPPPLPSEPPPP Sbjct: 661 VNMLHSLLSAQGVQPTQPTAFEFVRPYSDYLNPRSGGISSRSGNTDKPRPPPLPSEPPPP 720 Query: 721 LPPLPK 726 LPPLPK Sbjct: 721 LPPLPK 726 >2PK2-A nrPDB Length = 358 Score = 602 bits (1553), Expect = e-172, Method: Compositional matrix adjust. Identities = 280/281 (99%), Positives = 281/281 (100%) Query: 1 MEGERKNNNKRWYFTREQLENSPSRRFGVDPDKELSYRQQAANLLQDMGQRLNVSQLTIN 60 MEGERKNNNKRWYFTREQLENSPSRRFGVDPDKELSYRQQAANLLQDMGQRLNVSQLTIN Sbjct: 1 MEGERKNNNKRWYFTREQLENSPSRRFGVDPDKELSYRQQAANLLQDMGQRLNVSQLTIN 60 Query: 61 TAIVYMHRFYMIQSFTQFPGNSVAPAALFLAAKVEEQPKKLEHVIKVAHTCLHPQESLPD 120 TAIVYMHRFYMIQSFT+FPGNSVAPAALFLAAKVEEQPKKLEHVIKVAHTCLHPQESLPD Sbjct: 61 TAIVYMHRFYMIQSFTRFPGNSVAPAALFLAAKVEEQPKKLEHVIKVAHTCLHPQESLPD 120 Query: 121 TRSEAYLQQVQDLVILESIILQTLGFELTIDHPHTHVVKCTQLVRASKDLAQTSYFMATN 180 TRSEAYLQQVQDLVILESIILQTLGFELTIDHPHTHVVKCTQLVRASKDLAQTSYFMATN Sbjct: 121 TRSEAYLQQVQDLVILESIILQTLGFELTIDHPHTHVVKCTQLVRASKDLAQTSYFMATN 180 Query: 181 SLHLTTFSLQYTPPVVACVCIHLACKWSNWEIPVSTDGKHWWEYVDATVTLELLDELTHE 240 SLHLTTFSLQYTPPVVACVCIHLACKWSNWEIPVSTDGKHWWEYVDATVTLELLDELTHE Sbjct: 181 SLHLTTFSLQYTPPVVACVCIHLACKWSNWEIPVSTDGKHWWEYVDATVTLELLDELTHE 240 Query: 241 FLQILEKTPNRLKRIWNWRACEAAKKTKADDRGTDEKTSEQ 281 FLQILEKTPNRLKRIWNWRACEAAKKTKADDRGTDEKTSEQ Sbjct: 241 FLQILEKTPNRLKRIWNWRACEAAKKTKADDRGTDEKTSEQ 281 >3MIA-B nrPDB Length = 266 Score = 572 bits (1474), Expect = e-163, Method: Compositional matrix adjust. Identities = 266/266 (100%), Positives = 266/266 (100%) Query: 1 MEGERKNNNKRWYFTREQLENSPSRRFGVDPDKELSYRQQAANLLQDMGQRLNVSQLTIN 60 MEGERKNNNKRWYFTREQLENSPSRRFGVDPDKELSYRQQAANLLQDMGQRLNVSQLTIN Sbjct: 1 MEGERKNNNKRWYFTREQLENSPSRRFGVDPDKELSYRQQAANLLQDMGQRLNVSQLTIN 60 Query: 61 TAIVYMHRFYMIQSFTQFPGNSVAPAALFLAAKVEEQPKKLEHVIKVAHTCLHPQESLPD 120 TAIVYMHRFYMIQSFTQFPGNSVAPAALFLAAKVEEQPKKLEHVIKVAHTCLHPQESLPD Sbjct: 61 TAIVYMHRFYMIQSFTQFPGNSVAPAALFLAAKVEEQPKKLEHVIKVAHTCLHPQESLPD 120 Query: 121 TRSEAYLQQVQDLVILESIILQTLGFELTIDHPHTHVVKCTQLVRASKDLAQTSYFMATN 180 TRSEAYLQQVQDLVILESIILQTLGFELTIDHPHTHVVKCTQLVRASKDLAQTSYFMATN Sbjct: 121 TRSEAYLQQVQDLVILESIILQTLGFELTIDHPHTHVVKCTQLVRASKDLAQTSYFMATN 180 Query: 181 SLHLTTFSLQYTPPVVACVCIHLACKWSNWEIPVSTDGKHWWEYVDATVTLELLDELTHE 240 SLHLTTFSLQYTPPVVACVCIHLACKWSNWEIPVSTDGKHWWEYVDATVTLELLDELTHE Sbjct: 181 SLHLTTFSLQYTPPVVACVCIHLACKWSNWEIPVSTDGKHWWEYVDATVTLELLDELTHE 240 Query: 241 FLQILEKTPNRLKRIWNWRACEAAKK 266 FLQILEKTPNRLKRIWNWRACEAAKK Sbjct: 241 FLQILEKTPNRLKRIWNWRACEAAKK 266 >2IVX-A nrPDB Length = 257 Score = 452 bits (1164), Expect = e-127, Method: Compositional matrix adjust. Identities = 210/254 (82%), Positives = 230/254 (90%) Query: 11 RWYFTREQLENSPSRRFGVDPDKELSYRQQAANLLQDMGQRLNVSQLTINTAIVYMHRFY 70 RW+FTREQLEN+PSRR GV+ DKELS RQQAANL+Q+MGQRLNVSQLTINTAIVYMHRFY Sbjct: 4 RWFFTREQLENTPSRRCGVEADKELSCRQQAANLIQEMGQRLNVSQLTINTAIVYMHRFY 63 Query: 71 MIQSFTQFPGNSVAPAALFLAAKVEEQPKKLEHVIKVAHTCLHPQESLPDTRSEAYLQQV 130 M SFT+F N ++ ALFLAAKVEEQ +KLEHVIKVAH CLHP E L DT+ +AYLQQ Sbjct: 64 MHHSFTKFNKNIISSTALFLAAKVEEQARKLEHVIKVAHACLHPLEPLLDTKCDAYLQQT 123 Query: 131 QDLVILESIILQTLGFELTIDHPHTHVVKCTQLVRASKDLAQTSYFMATNSLHLTTFSLQ 190 ++LVILE+I+LQTLGFE+TI+HPHT VVKCTQLVRASKDLAQTSYFMATNSLHLTTF LQ Sbjct: 124 RELVILETIMLQTLGFEITIEHPHTDVVKCTQLVRASKDLAQTSYFMATNSLHLTTFCLQ 183 Query: 191 YTPPVVACVCIHLACKWSNWEIPVSTDGKHWWEYVDATVTLELLDELTHEFLQILEKTPN 250 Y P V+ACVCIHLACKWSNWEIPVSTDGKHWWEYVD TVTLELLDELTHEFLQILEKTPN Sbjct: 184 YKPTVIACVCIHLACKWSNWEIPVSTDGKHWWEYVDPTVTLELLDELTHEFLQILEKTPN 243 Query: 251 RLKRIWNWRACEAA 264 RLK+I NWRA +AA Sbjct: 244 RLKKIRNWRANQAA 257 >4NST-B nrPDB Length = 268 Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 82/242 (33%), Positives = 136/242 (56%), Gaps = 17/242 (7%) Query: 12 WYFTREQLENSPSRRFGVDPDKELSYRQQAANLLQDMGQRLNVSQLTINTAIVYMHRFYM 71 WY+ ++ L ++PS+ G+DP E YR++ A + D+G RL + T+ T I+Y HRFYM Sbjct: 25 WYWDKKDLAHTPSQLEGLDPATEARYRREGARFIFDVGTRLGLHYDTLATGIIYFHRFYM 84 Query: 72 IQSFTQFPGNSVAPAALFLAAKVEEQPKKLEHVIKVAHTCLHPQE--SLPDTRSEAYLQQ 129 SF QFP LFLA KVEE PKK + +IK A + L+ + D E Sbjct: 85 FHSFKQFPRYVTGACCLFLAGKVEETPKKCKDIIKTARSLLNDVQFGQFGDDPKE----- 139 Query: 130 VQDLVILESIILQTLGFELTIDHPHTHVVKCTQLVRASKD----LAQTSYFMATNSLHLT 185 ++++LE I+LQT+ F+L ++HP+ ++K + ++ K+ L Q ++ +SL T Sbjct: 140 --EVMVLERILLQTIKFDLQVEHPYQFLLKYAKQLKGDKNKIQKLVQMAWTFVNDSL-CT 196 Query: 186 TFSLQYTPPVVACVCIHLACKWSNWEIPVSTDG---KHWWEYVDATVTLELLDELTHEFL 242 T SLQ+ P ++A ++LA + +EI T + WWE V +++L+++ H+ L Sbjct: 197 TLSLQWEPEIIAVAVMYLAGRLCKFEIQEWTSKPMYRRWWEQFVQDVPVDVLEDICHQIL 256 Query: 243 QI 244 + Sbjct: 257 DL 258 >4F7N-B nrPDB Length = 287 Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 53/209 (25%), Positives = 97/209 (46%), Gaps = 12/209 (5%) Query: 43 NLLQDMGQRLNVSQLTINTAIVYMHRFYMIQSFTQFPGNSVAPAALFLAAKVEE-QPKKL 101 N++Q +G+ L + Q I TA VY RFY S +AP +FLA+KVEE Sbjct: 50 NVIQALGEHLKLRQQVIATATVYFKRFYARYSLKSIDPVLMAPTCVFLASKVEEFGVVSN 109 Query: 102 EHVIKVAHTCLHPQESLPDTRSEAYLQQVQDLVILESIILQTLGFELTIDHPHTHVVKCT 161 +I A + L + S + Y ++ ++ E +L+ + L + HP+ +++ Sbjct: 110 TRLIAAATSVLKTRFSYAFPKEFPY--RMNHILECEFYLLELMDCCLIVYHPYRPLLQYV 167 Query: 162 QLVRASKDLAQTSYFMATNSLHLTTFSLQYTPPVVACVCIHLACKWSNWEIPVSTDGKHW 221 Q + +D+ + N + T L Y P ++A C+H+AC + D + W Sbjct: 168 QDM-GQEDMLLPLAWRIVNDTYRTDLCLLYPPFMIALACLHVAC------VVQQKDARQW 220 Query: 222 WEYVDATVTLELLDELTHEFLQILEKTPN 250 + + +V +E + E+ L++ E+ N Sbjct: 221 --FAELSVDMEKILEIIRVILKLYEQWKN 247 >3DDQ-B nrPDB Length = 269 Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust. Identities = 44/178 (24%), Positives = 77/178 (43%), Gaps = 22/178 (12%) Query: 31 PDKELSYRQQAANLLQDMGQRLNVSQLTINTAIVYMHRFYMIQSFTQFPGNSVAPAALFL 90 PD S R + L ++G+ + T++ A+ Y+ RF S + V AA+ L Sbjct: 34 PDITNSMRAILVDWLVEVGEEYKLQNETLHLAVNYIDRFLSSMSVLRGKLQLVGTAAMLL 93 Query: 91 AAKVEE-QPKKLEHVIKVAHTCLHPQESLPDTRSEAYLQQVQDLVILESIILQTLGFEL- 148 A+K EE P ++ + + DT ++ + ++ +E ++L+ L F+L Sbjct: 94 ASKFEEIYPPEVAEFVYITD----------DTYTK------KQVLRMEHLVLKVLAFDLA 137 Query: 149 --TIDHPHTHVVKCTQLVRASKDLAQTSYFMATNSLHLTTFSLQYTPPVVACVCIHLA 204 TI+ T Q A+ + + F+ SL L+Y P V+A HLA Sbjct: 138 APTINQFLTQYFLHQQ--PANCKVESLAMFLGELSLIDADPYLKYLPSVIAAAAFHLA 193 >1QZF-A nrPDB Length = 521 Score = 35.8 bits (81), Expect = 0.063, Method: Compositional matrix adjust. Identities = 27/87 (31%), Positives = 43/87 (49%), Gaps = 2/87 (2%) Query: 3 GERKNNNKRWYFTREQLENSPSRRFGVDPDKELSYRQQAANLLQDMGQRLNVSQLTINTA 62 G RK N R F +E++ N+PS RFG + E Y + +L++ R N + ++ + Sbjct: 208 GIRKMGN-RHKFPKEEIYNTPSIRFGRE-HYEFQYLDLLSRVLENGAYRENRTGISTYSI 265 Query: 63 IVYMHRFYMIQSFTQFPGNSVAPAALF 89 M RF M +SF VA ++F Sbjct: 266 FGQMMRFDMRESFPLLTTKKVAIRSIF 292 >1ZP2-A nrPDB Length = 235 Score = 34.7 bits (78), Expect = 0.15, Method: Composition-based stats. Identities = 30/114 (26%), Positives = 53/114 (46%), Gaps = 13/114 (11%) Query: 44 LLQDMGQRLNVSQLTINTAIVYMHRFYMIQSFTQ--FPGNSVAPAALFLAAKVEEQPKKL 101 ++Q G RL + Q + TAIV + R YM++ + F ++ ++L+ KVEE P + Sbjct: 34 VVQTFGDRLRLRQRVLATAIVLLRR-YMLKKNEEKGFSLEALVATCIYLSCKVEECPVHI 92 Query: 102 EHVIKVAHTCLHPQESLPDTRSEAYLQQVQDLVILESIILQTLGFELTIDHPHT 155 + A+ SL S + + ++ E I+ L L + HP+T Sbjct: 93 RTICNEANDLW----SLKVKLSRSNISEI------EFEIISVLDAFLIVHHPYT 136 >5T5H-u nrPDB Length = 254 Score = 32.0 bits (71), Expect = 0.93, Method: Compositional matrix adjust. Identities = 18/54 (33%), Positives = 33/54 (61%), Gaps = 2/54 (3%) Query: 263 AAKKTKADDRGTDEKTS-EQTILNM-ISQSSSDTTIAGLMSMSTSTTSAVPSLP 314 +A +TKADD+G DEK + IL++ ++++++ + G+M + AVP P Sbjct: 125 SAVRTKADDQGDDEKRFPFKAILDVGLARTTTGARVFGVMKGAVDGGLAVPHRP 178 >1YFM-A nrPDB Length = 488 Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust. Identities = 20/69 (28%), Positives = 37/69 (53%), Gaps = 5/69 (7%) Query: 81 NSVAPAALFLAAKVEEQPKKLEHVIKVAHTCLHPQESLPDTRSE---AYLQQVQDLVILE 137 N + P L +E + K+ +H++K+ T H Q++ P T + Y+QQV++ + Sbjct: 183 NELIPELTNLKNALEAKSKEFDHIVKIGRT--HLQDATPLTLGQEFSGYVQQVENGIQRV 240 Query: 138 SIILQTLGF 146 + L+TL F Sbjct: 241 AHSLKTLSF 249 >1KXU-A nrPDB Length = 333 Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust. Identities = 13/39 (33%), Positives = 20/39 (51%) Query: 58 TINTAIVYMHRFYMIQSFTQFPGNSVAPAALFLAAKVEE 96 + TA +Y RFY+ S ++ + FLA KV+E Sbjct: 89 VVGTACMYFKRFYLNNSVMEYHPRIIMLTCAFLACKVDE 127 >5X6O-G nrPDB Length = 747 Score = 30.4 bits (67), Expect = 2.8, Method: Compositional matrix adjust. Identities = 15/49 (30%), Positives = 30/49 (61%), Gaps = 2/49 (4%) Query: 363 SLPQDGSNAFISQKQNSKSVPSAKVSLKEYRAKHAEELAAQKRQLENME 411 S+ +D N +++ K++ + KV+ E + KH +ELA K++L+ +E Sbjct: 76 SMLRDKINFLNIEREKEKNIQAVKVN--ELQVKHLQELAKLKQELQKLE 122 >4RM4-A nrPDB Length = 396 Score = 29.6 bits (65), Expect = 5.3, Method: Compositional matrix adjust. Identities = 18/63 (28%), Positives = 32/63 (50%) Query: 426 LSHHDSHSSVILKMPIEGSENPERPFLEKADKTALKMRIPVAGGDKAASSKPEEIKMRIK 485 + + S +++ P + SE E+ FLE+ DK ++ AG + +KPE+ + I Sbjct: 155 MEQFKAWSDLLVSTPKDKSEEAEKAFLEERDKCEEELAAFFAGIIEEKRNKPEQDIISIL 214 Query: 486 VHA 488 V A Sbjct: 215 VEA 217 >3TR4-A nrPDB Length = 178 Score = 29.6 bits (65), Expect = 5.3, Method: Composition-based stats. Identities = 13/34 (38%), Positives = 20/34 (58%) Query: 233 LLDELTHEFLQILEKTPNRLKRIWNWRACEAAKK 266 LLD ++H F + + PN+ ++ W EAAKK Sbjct: 132 LLDAISHFFERYKDLEPNKWAKVKGWEDKEAAKK 165 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 6GZH-B nrPDB 1352 0.0 2PK2-A nrPDB 530 e-151 3MIA-B nrPDB 492 e-139 2IVX-A nrPDB 446 e-125 4NST-B nrPDB 346 3e-95 4F7N-B nrPDB 281 8e-76 Sequences not found previously or not previously below threshold: 1ZP2-A nrPDB 81 2e-15 1KXU-A nrPDB 72 1e-12 3DDQ-B nrPDB 57 3e-08 3QHW-B nrPDB 54 2e-07 2W99-A nrPDB 35 0.11 1QZF-A nrPDB 34 0.18 5T5H-u nrPDB 33 0.37 4RM4-A nrPDB 32 0.64 5X6O-G nrPDB 32 1.0 5BUO-A nrPDB 32 1.3 5OMD-A nrPDB 31 2.2 6FF7-0 nrPDB 29 7.3 >6GZH-B nrPDB Length = 726 Score = 1352 bits (3500), Expect = 0.0, Method: Composition-based stats. Identities = 723/726 (99%), Positives = 724/726 (99%) Query: 1 MEGERKNNNKRWYFTREQLENSPSRRFGVDPDKELSYRQQAANLLQDMGQRLNVSQLTIN 60 MEGERKNNNKRWYFTREQLENSPSRRFGVDPDKELSYRQQAANLLQDMGQRLNVSQLTIN Sbjct: 1 MEGERKNNNKRWYFTREQLENSPSRRFGVDPDKELSYRQQAANLLQDMGQRLNVSQLTIN 60 Query: 61 TAIVYMHRFYMIQSFTQFPGNSVAPAALFLAAKVEEQPKKLEHVIKVAHTCLHPQESLPD 120 TAIVYMHRFYMIQSFT+FPGNSVAPAALFLAAKVE QPKKLEHVIKVAHTCLHPQESLPD Sbjct: 61 TAIVYMHRFYMIQSFTRFPGNSVAPAALFLAAKVEGQPKKLEHVIKVAHTCLHPQESLPD 120 Query: 121 TRSEAYLQQVQDLVILESIILQTLGFELTIDHPHTHVVKCTQLVRASKDLAQTSYFMATN 180 TRSEAYLQQVQDLVILESIILQTLGFELTIDHPHTHVVKCTQLVRASKDLAQTSYFMATN Sbjct: 121 TRSEAYLQQVQDLVILESIILQTLGFELTIDHPHTHVVKCTQLVRASKDLAQTSYFMATN 180 Query: 181 SLHLTTFSLQYTPPVVACVCIHLACKWSNWEIPVSTDGKHWWEYVDATVTLELLDELTHE 240 SLHLTTFSLQYTPPVVACVCIHLACKWSNWEIPVSTDGKHWWEYVDATVTLELLDELTHE Sbjct: 181 SLHLTTFSLQYTPPVVACVCIHLACKWSNWEIPVSTDGKHWWEYVDATVTLELLDELTHE 240 Query: 241 FLQILEKTPNRLKRIWNWRACEAAKKTKADDRGTDEKTSEQTILNMISQSSSDTTIAGLM 300 LQILEKTPNRLKRIWNWRACEAAKKTKADDRGTDEKTSEQTILNMISQSSSDTTIAGLM Sbjct: 241 LLQILEKTPNRLKRIWNWRACEAAKKTKADDRGTDEKTSEQTILNMISQSSSDTTIAGLM 300 Query: 301 SMSTSTTSAVPSLPVSEESSSNLTSVEMLPGKRWLSSQPSFKLEPTQGHRTSENLALTGV 360 SMSTSTTSAVPSLPVSEESSSNLTSVEMLPGKRWLSSQPSFKLEPTQGHRTSENLALTGV Sbjct: 301 SMSTSTTSAVPSLPVSEESSSNLTSVEMLPGKRWLSSQPSFKLEPTQGHRTSENLALTGV 360 Query: 361 DHSLPQDGSNAFISQKQNSKSVPSAKVSLKEYRAKHAEELAAQKRQLENMEANVKSQYAY 420 DHSLPQDGSNAFISQKQNSKSVPSAKVSLKEYRAKHAEELAAQKRQLENMEANVKSQYAY Sbjct: 361 DHSLPQDGSNAFISQKQNSKSVPSAKVSLKEYRAKHAEELAAQKRQLENMEANVKSQYAY 420 Query: 421 AAQNLLSHHDSHSSVILKMPIEGSENPERPFLEKADKTALKMRIPVAGGDKAASSKPEEI 480 AAQNLLSHHDSHSSVILKMPIEGSENPERPFLEKADKTALKMRIPVAGGDKAASSKPEEI Sbjct: 421 AAQNLLSHHDSHSSVILKMPIEGSENPERPFLEKADKTALKMRIPVAGGDKAASSKPEEI 480 Query: 481 KMRIKVHAAADKHNSVEDSVTKSREHKEKHKTHPSNHHHHHNHHSHKHSHSQLPVGTGNK 540 KMRIKVHAAADKHNSVEDSVTKSREHKEKHKTHPSNHHHHHNHHSHKHSHSQLPVGTGNK Sbjct: 481 KMRIKVHAAADKHNSVEDSVTKSREHKEKHKTHPSNHHHHHNHHSHKHSHSQLPVGTGNK 540 Query: 541 RPGDPKHSSQTSNLAHKTYSLSSSFSSSSSTRKRGPSEETGGAVFDHPAKIAKSTKSSSL 600 RPGDPKHSSQTSNLAHKTYSLSSSFSSSSSTRKRGPSEETGGAVFDHPAKIAKSTKSSSL Sbjct: 541 RPGDPKHSSQTSNLAHKTYSLSSSFSSSSSTRKRGPSEETGGAVFDHPAKIAKSTKSSSL 600 Query: 601 NFSFPSLPTMGQMPGHSSDTSGLSFSQPSCKTRVPHSKLDKGPTGANGHNTTQTIDYQDT 660 NFSFPSLPTMGQMPGHSSDTSGLSFSQPSCKTRVPHSKLDKGPTGANGHNTTQTIDYQDT Sbjct: 601 NFSFPSLPTMGQMPGHSSDTSGLSFSQPSCKTRVPHSKLDKGPTGANGHNTTQTIDYQDT 660 Query: 661 VNMLHSLLSAQGVQPTQPTAFEFVRPYSDYLNPRSGGISSRSGNTDKPRPPPLPSEPPPP 720 VNMLHSLLSAQGVQPTQPTAFEFVRPYSDYLNPRSGGISSRSGNTDKPRPPPLPSEPPPP Sbjct: 661 VNMLHSLLSAQGVQPTQPTAFEFVRPYSDYLNPRSGGISSRSGNTDKPRPPPLPSEPPPP 720 Query: 721 LPPLPK 726 LPPLPK Sbjct: 721 LPPLPK 726 >2PK2-A nrPDB Length = 358 Score = 530 bits (1365), Expect = e-151, Method: Composition-based stats. Identities = 280/281 (99%), Positives = 281/281 (100%) Query: 1 MEGERKNNNKRWYFTREQLENSPSRRFGVDPDKELSYRQQAANLLQDMGQRLNVSQLTIN 60 MEGERKNNNKRWYFTREQLENSPSRRFGVDPDKELSYRQQAANLLQDMGQRLNVSQLTIN Sbjct: 1 MEGERKNNNKRWYFTREQLENSPSRRFGVDPDKELSYRQQAANLLQDMGQRLNVSQLTIN 60 Query: 61 TAIVYMHRFYMIQSFTQFPGNSVAPAALFLAAKVEEQPKKLEHVIKVAHTCLHPQESLPD 120 TAIVYMHRFYMIQSFT+FPGNSVAPAALFLAAKVEEQPKKLEHVIKVAHTCLHPQESLPD Sbjct: 61 TAIVYMHRFYMIQSFTRFPGNSVAPAALFLAAKVEEQPKKLEHVIKVAHTCLHPQESLPD 120 Query: 121 TRSEAYLQQVQDLVILESIILQTLGFELTIDHPHTHVVKCTQLVRASKDLAQTSYFMATN 180 TRSEAYLQQVQDLVILESIILQTLGFELTIDHPHTHVVKCTQLVRASKDLAQTSYFMATN Sbjct: 121 TRSEAYLQQVQDLVILESIILQTLGFELTIDHPHTHVVKCTQLVRASKDLAQTSYFMATN 180 Query: 181 SLHLTTFSLQYTPPVVACVCIHLACKWSNWEIPVSTDGKHWWEYVDATVTLELLDELTHE 240 SLHLTTFSLQYTPPVVACVCIHLACKWSNWEIPVSTDGKHWWEYVDATVTLELLDELTHE Sbjct: 181 SLHLTTFSLQYTPPVVACVCIHLACKWSNWEIPVSTDGKHWWEYVDATVTLELLDELTHE 240 Query: 241 FLQILEKTPNRLKRIWNWRACEAAKKTKADDRGTDEKTSEQ 281 FLQILEKTPNRLKRIWNWRACEAAKKTKADDRGTDEKTSEQ Sbjct: 241 FLQILEKTPNRLKRIWNWRACEAAKKTKADDRGTDEKTSEQ 281 >3MIA-B nrPDB Length = 266 Score = 492 bits (1267), Expect = e-139, Method: Composition-based stats. Identities = 266/266 (100%), Positives = 266/266 (100%) Query: 1 MEGERKNNNKRWYFTREQLENSPSRRFGVDPDKELSYRQQAANLLQDMGQRLNVSQLTIN 60 MEGERKNNNKRWYFTREQLENSPSRRFGVDPDKELSYRQQAANLLQDMGQRLNVSQLTIN Sbjct: 1 MEGERKNNNKRWYFTREQLENSPSRRFGVDPDKELSYRQQAANLLQDMGQRLNVSQLTIN 60 Query: 61 TAIVYMHRFYMIQSFTQFPGNSVAPAALFLAAKVEEQPKKLEHVIKVAHTCLHPQESLPD 120 TAIVYMHRFYMIQSFTQFPGNSVAPAALFLAAKVEEQPKKLEHVIKVAHTCLHPQESLPD Sbjct: 61 TAIVYMHRFYMIQSFTQFPGNSVAPAALFLAAKVEEQPKKLEHVIKVAHTCLHPQESLPD 120 Query: 121 TRSEAYLQQVQDLVILESIILQTLGFELTIDHPHTHVVKCTQLVRASKDLAQTSYFMATN 180 TRSEAYLQQVQDLVILESIILQTLGFELTIDHPHTHVVKCTQLVRASKDLAQTSYFMATN Sbjct: 121 TRSEAYLQQVQDLVILESIILQTLGFELTIDHPHTHVVKCTQLVRASKDLAQTSYFMATN 180 Query: 181 SLHLTTFSLQYTPPVVACVCIHLACKWSNWEIPVSTDGKHWWEYVDATVTLELLDELTHE 240 SLHLTTFSLQYTPPVVACVCIHLACKWSNWEIPVSTDGKHWWEYVDATVTLELLDELTHE Sbjct: 181 SLHLTTFSLQYTPPVVACVCIHLACKWSNWEIPVSTDGKHWWEYVDATVTLELLDELTHE 240 Query: 241 FLQILEKTPNRLKRIWNWRACEAAKK 266 FLQILEKTPNRLKRIWNWRACEAAKK Sbjct: 241 FLQILEKTPNRLKRIWNWRACEAAKK 266 >2IVX-A nrPDB Length = 257 Score = 446 bits (1147), Expect = e-125, Method: Composition-based stats. Identities = 210/256 (82%), Positives = 231/256 (90%) Query: 9 NKRWYFTREQLENSPSRRFGVDPDKELSYRQQAANLLQDMGQRLNVSQLTINTAIVYMHR 68 + RW+FTREQLEN+PSRR GV+ DKELS RQQAANL+Q+MGQRLNVSQLTINTAIVYMHR Sbjct: 2 SSRWFFTREQLENTPSRRCGVEADKELSCRQQAANLIQEMGQRLNVSQLTINTAIVYMHR 61 Query: 69 FYMIQSFTQFPGNSVAPAALFLAAKVEEQPKKLEHVIKVAHTCLHPQESLPDTRSEAYLQ 128 FYM SFT+F N ++ ALFLAAKVEEQ +KLEHVIKVAH CLHP E L DT+ +AYLQ Sbjct: 62 FYMHHSFTKFNKNIISSTALFLAAKVEEQARKLEHVIKVAHACLHPLEPLLDTKCDAYLQ 121 Query: 129 QVQDLVILESIILQTLGFELTIDHPHTHVVKCTQLVRASKDLAQTSYFMATNSLHLTTFS 188 Q ++LVILE+I+LQTLGFE+TI+HPHT VVKCTQLVRASKDLAQTSYFMATNSLHLTTF Sbjct: 122 QTRELVILETIMLQTLGFEITIEHPHTDVVKCTQLVRASKDLAQTSYFMATNSLHLTTFC 181 Query: 189 LQYTPPVVACVCIHLACKWSNWEIPVSTDGKHWWEYVDATVTLELLDELTHEFLQILEKT 248 LQY P V+ACVCIHLACKWSNWEIPVSTDGKHWWEYVD TVTLELLDELTHEFLQILEKT Sbjct: 182 LQYKPTVIACVCIHLACKWSNWEIPVSTDGKHWWEYVDPTVTLELLDELTHEFLQILEKT 241 Query: 249 PNRLKRIWNWRACEAA 264 PNRLK+I NWRA +AA Sbjct: 242 PNRLKKIRNWRANQAA 257 >4NST-B nrPDB Length = 268 Score = 346 bits (887), Expect = 3e-95, Method: Composition-based stats. Identities = 82/250 (32%), Positives = 139/250 (55%), Gaps = 17/250 (6%) Query: 12 WYFTREQLENSPSRRFGVDPDKELSYRQQAANLLQDMGQRLNVSQLTINTAIVYMHRFYM 71 WY+ ++ L ++PS+ G+DP E YR++ A + D+G RL + T+ T I+Y HRFYM Sbjct: 25 WYWDKKDLAHTPSQLEGLDPATEARYRREGARFIFDVGTRLGLHYDTLATGIIYFHRFYM 84 Query: 72 IQSFTQFPGNSVAPAALFLAAKVEEQPKKLEHVIKVAHTCLHPQE--SLPDTRSEAYLQQ 129 SF QFP LFLA KVEE PKK + +IK A + L+ + D E Sbjct: 85 FHSFKQFPRYVTGACCLFLAGKVEETPKKCKDIIKTARSLLNDVQFGQFGDDPKE----- 139 Query: 130 VQDLVILESIILQTLGFELTIDHPHTHVVKCTQLVRASKD----LAQTSYFMATNSLHLT 185 ++++LE I+LQT+ F+L ++HP+ ++K + ++ K+ L Q ++ +SL T Sbjct: 140 --EVMVLERILLQTIKFDLQVEHPYQFLLKYAKQLKGDKNKIQKLVQMAWTFVNDSL-CT 196 Query: 186 TFSLQYTPPVVACVCIHLACKWSNWEIPVSTDG---KHWWEYVDATVTLELLDELTHEFL 242 T SLQ+ P ++A ++LA + +EI T + WWE V +++L+++ H+ L Sbjct: 197 TLSLQWEPEIIAVAVMYLAGRLCKFEIQEWTSKPMYRRWWEQFVQDVPVDVLEDICHQIL 256 Query: 243 QILEKTPNRL 252 + + ++ Sbjct: 257 DLYSQGKQQM 266 >4F7N-B nrPDB Length = 287 Score = 281 bits (718), Expect = 8e-76, Method: Composition-based stats. Identities = 58/244 (23%), Positives = 108/244 (44%), Gaps = 17/244 (6%) Query: 11 RWYFTREQLENSPSRRFGVDPDKELSYRQQA---ANLLQDMGQRLNVSQLTINTAIVYMH 67 +W ++ L R+ + E Y + N++Q +G+ L + Q I TA VY Sbjct: 17 QWILDKQDLLK--ERQKDLKFLSEEEYWKLQIFFTNVIQALGEHLKLRQQVIATATVYFK 74 Query: 68 RFYMIQSFTQFPGNSVAPAALFLAAKVEE-QPKKLEHVIKVAHTCLHPQESLPDTRSEAY 126 RFY S +AP +FLA+KVEE +I A + L + S + Y Sbjct: 75 RFYARYSLKSIDPVLMAPTCVFLASKVEEFGVVSNTRLIAAATSVLKTRFSYAFPKEFPY 134 Query: 127 LQQVQDLVILESIILQTLGFELTIDHPHTHVVKCTQLVRASKDLAQTSYFMATNSLHLTT 186 ++ ++ E +L+ + L + HP+ +++ Q + +D+ + N + T Sbjct: 135 --RMNHILECEFYLLELMDCCLIVYHPYRPLLQYVQDM-GQEDMLLPLAWRIVNDTYRTD 191 Query: 187 FSLQYTPPVVACVCIHLACKWSNWEIPVSTDGKHWWEYVDATVTLELLDELTHEFLQILE 246 L Y P ++A C+H+AC + D + W + + +V +E + E+ L++ E Sbjct: 192 LCLLYPPFMIALACLHVAC------VVQQKDARQW--FAELSVDMEKILEIIRVILKLYE 243 Query: 247 KTPN 250 + N Sbjct: 244 QWKN 247 >1ZP2-A nrPDB Length = 235 Score = 81.0 bits (198), Expect = 2e-15, Method: Composition-based stats. Identities = 42/212 (19%), Positives = 85/212 (40%), Gaps = 22/212 (10%) Query: 13 YFTREQLENS--PSRRFGVDP---DKELSYRQQAANLLQDMGQRLNVSQLTINTAIVYMH 67 Y+ QL + ++P K+ Y+ + ++Q G RL + Q + TAIV + Sbjct: 1 YWASSQLTQLFLSTDLESLEPTCLSKDTIYQWK---VVQTFGDRLRLRQRVLATAIVLLR 57 Query: 68 RFYMIQSFTQ-FPGNSVAPAALFLAAKVEEQPKKLEHVIKVAHTCLHPQESLPDTRSEAY 126 R+ + ++ + F ++ ++L+ KVEE P + + A+ + L Sbjct: 58 RYMLKKNEEKGFSLEALVATCIYLSCKVEECPVHIRTICNEANDLWSLKVKLS------- 110 Query: 127 LQQVQDLVILESIILQTLGFELTIDHPHTHVVKCTQL-VRASKDLAQTSYFMATNSLHLT 185 ++ +E I+ L L + HP+T + + + K L + N + + Sbjct: 111 ---RSNISEIEFEIISVLDAFLIVHHPYTSLEQAFHDGIINQKQL--EFAWSIVNDSYAS 165 Query: 186 TFSLQYTPPVVACVCIHLACKWSNWEIPVSTD 217 + L P +A + ++C IP D Sbjct: 166 SLCLMAHPHQLAYAALLISCCNDENTIPKLLD 197 >1KXU-A nrPDB Length = 333 Score = 71.7 bits (174), Expect = 1e-12, Method: Composition-based stats. Identities = 48/240 (20%), Positives = 94/240 (39%), Gaps = 34/240 (14%) Query: 58 TINTAIVYMHRFYMIQSFTQFPGNSVAPAALFLAAKVEEQPKKLEHVIKVAHTCLHPQES 117 + TA +Y RFY+ S ++ + FLA KV+E PQ Sbjct: 89 VVGTACMYFKRFYLNNSVMEYHPRIIMLTCAFLACKVDEFNVS------------SPQF- 135 Query: 118 LPDTRSEAYLQQ--VQDLVILESIILQTLGFELTIDHPHTHVVKCTQLVRA------SKD 169 + + R Q+ ++ ++ E +++Q L F L + +P+ ++ + + Sbjct: 136 VGNLRESPLGQEKALEQILEYELLLIQQLNFHLIVHNPYRPFEGFLIDLKTRYPILENPE 195 Query: 170 LAQTSYFMATNSLHLTTFSLQYTPPVVACVCIHLACKWSNWEIPVSTDGKHWWEYVDATV 229 + + + N + LT L YTP +A I + S G Y+ ++ Sbjct: 196 ILRKTADDFLNRIALTDAYLLYTPSQIALTAILSSA---------SRAGITMESYLSESL 246 Query: 230 TLELLDELTHEFLQILEKTPNRLKRIWNWRACEAAKKTKADDRGTDEKTSEQTILNMISQ 289 L+ + L I++ N +K+ R+ E A + +R S + LN+I++ Sbjct: 247 MLKENRTCLSQLLDIMKSMRNLVKKYEPPRSEEVAVLKQKLERC----HSAELALNVITK 302 >3DDQ-B nrPDB Length = 269 Score = 56.7 bits (135), Expect = 3e-08, Method: Composition-based stats. Identities = 49/230 (21%), Positives = 89/230 (38%), Gaps = 30/230 (13%) Query: 30 DPDKELSYRQQAANLLQDMGQRLNVSQLTINTAIVYMHRFYMIQSFTQFPGNSVAPAALF 89 PD S R + L ++G+ + T++ A+ Y+ RF S + V AA+ Sbjct: 33 QPDITNSMRAILVDWLVEVGEEYKLQNETLHLAVNYIDRFLSSMSVLRGKLQLVGTAAML 92 Query: 90 LAAKVEEQPKKLEHVIKVAHTCLHPQE--SLPDTRSEAYLQQVQDLVILESIILQTLGFE 147 LA+K EE ++P E + Y ++ ++ +E ++L+ L F+ Sbjct: 93 LASKFEE---------------IYPPEVAEFVYITDDTYTKK--QVLRMEHLVLKVLAFD 135 Query: 148 LTIDHPHTHVVKC-TQLVRASKDLAQTSYFMATNSLHLTTFSLQYTPPVVACVCIHLACK 206 L + + + A+ + + F+ SL L+Y P V+A HLA Sbjct: 136 LAAPTINQFLTQYFLHQQPANCKVESLAMFLGELSLIDADPYLKYLPSVIAAAAFHLA-- 193 Query: 207 WSNWEIPVSTDGKHWWEYVDATV--TLELLDELTHEFLQILEKTPNRLKR 254 + G+ W E + TLE L + Q + P ++ Sbjct: 194 ------LYTVTGQSWPESLVQKTGYTLETLKPCLLDLHQTYLRAPQHAQQ 237 >3QHW-B nrPDB Length = 261 Score = 54.4 bits (129), Expect = 2e-07, Method: Composition-based stats. Identities = 47/230 (20%), Positives = 88/230 (38%), Gaps = 30/230 (13%) Query: 30 DPDKELSYRQQAANLLQDMGQRLNVSQLTINTAIVYMHRFYMIQSFTQFPGNSVAPAALF 89 PD S R + L ++G+ + T++ A+ Y+ RF S + V AA+ Sbjct: 32 QPDITNSMRAILVDWLVEVGEEYKLQNETLHLAVNYIDRFLSSMSVLRGKLQLVGTAAML 91 Query: 90 LAAKVEEQPKKLEHVIKVAHTCLHPQE--SLPDTRSEAYLQQVQDLVILESIILQTLGFE 147 LA+K EE ++P E + Y ++ ++ +E ++L+ L F+ Sbjct: 92 LASKFEE---------------IYPPEVAEFVYITDDTYSKK--QVLRMEHLVLKVLAFD 134 Query: 148 LTIDHPHTHVVKCTQLVRASKDLAQTSYFMATN-SLHLTTFSLQYTPPVVACVCIHLACK 206 L + + + ++ + ++ SL L+Y P ++A HLA Sbjct: 135 LAAPTVNQFLTQYFLHLQPANCKVESLAMFLGELSLIDADPYLKYLPSLIAGAAFHLA-- 192 Query: 207 WSNWEIPVSTDGKHWWEYVDATV--TLELLDELTHEFLQILEKTPNRLKR 254 + G+ W E + TLE L + Q K P ++ Sbjct: 193 ------LYTVTGQSWPESLAQQTGYTLESLKPCLVDLHQTYLKAPQHAQQ 236 >2W99-A nrPDB Length = 271 Score = 35.1 bits (79), Expect = 0.11, Method: Composition-based stats. Identities = 11/62 (17%), Positives = 28/62 (45%) Query: 36 SYRQQAANLLQDMGQRLNVSQLTINTAIVYMHRFYMIQSFTQFPGNSVAPAALFLAAKVE 95 S R+ A + ++ + + A+ Y+ RF ++ + + +F+A+K++ Sbjct: 55 SMRKIVATWMLEVCEEQKCEEEVFPLAMNYLDRFLSLEPVKKSRLQLLGATCMFVASKMK 114 Query: 96 EQ 97 E Sbjct: 115 ET 116 >1QZF-A nrPDB Length = 521 Score = 34.3 bits (77), Expect = 0.18, Method: Composition-based stats. Identities = 27/87 (31%), Positives = 43/87 (49%), Gaps = 2/87 (2%) Query: 3 GERKNNNKRWYFTREQLENSPSRRFGVDPDKELSYRQQAANLLQDMGQRLNVSQLTINTA 62 G RK N R F +E++ N+PS RFG + E Y + +L++ R N + ++ + Sbjct: 208 GIRKMGN-RHKFPKEEIYNTPSIRFGRE-HYEFQYLDLLSRVLENGAYRENRTGISTYSI 265 Query: 63 IVYMHRFYMIQSFTQFPGNSVAPAALF 89 M RF M +SF VA ++F Sbjct: 266 FGQMMRFDMRESFPLLTTKKVAIRSIF 292 >5T5H-u nrPDB Length = 254 Score = 33.2 bits (74), Expect = 0.37, Method: Composition-based stats. Identities = 18/54 (33%), Positives = 33/54 (61%), Gaps = 2/54 (3%) Query: 263 AAKKTKADDRGTDEKTSE-QTILNM-ISQSSSDTTIAGLMSMSTSTTSAVPSLP 314 +A +TKADD+G DEK + IL++ ++++++ + G+M + AVP P Sbjct: 125 SAVRTKADDQGDDEKRFPFKAILDVGLARTTTGARVFGVMKGAVDGGLAVPHRP 178 >4RM4-A nrPDB Length = 396 Score = 32.4 bits (72), Expect = 0.64, Method: Composition-based stats. Identities = 18/56 (32%), Positives = 30/56 (53%) Query: 433 SSVILKMPIEGSENPERPFLEKADKTALKMRIPVAGGDKAASSKPEEIKMRIKVHA 488 S +++ P + SE E+ FLE+ DK ++ AG + +KPE+ + I V A Sbjct: 162 SDLLVSTPKDKSEEAEKAFLEERDKCEEELAAFFAGIIEEKRNKPEQDIISILVEA 217 >5X6O-G nrPDB Length = 747 Score = 32.0 bits (71), Expect = 1.0, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 31/53 (58%), Gaps = 2/53 (3%) Query: 363 SLPQDGSNAFISQKQNSKSVPSAKVSLKEYRAKHAEELAAQKRQLENMEANVK 415 S+ +D N +++ K++ + KV+ E + KH +ELA K++L+ +E K Sbjct: 76 SMLRDKINFLNIEREKEKNIQAVKVN--ELQVKHLQELAKLKQELQKLEDEKK 126 >5BUO-A nrPDB Length = 342 Score = 31.6 bits (70), Expect = 1.3, Method: Composition-based stats. Identities = 26/126 (20%), Positives = 49/126 (38%), Gaps = 7/126 (5%) Query: 202 HLACKWSNWEIPVSTDGKHWWEYVD--ATVTLELLDELTHEFLQ----ILEKTPNRLKRI 255 H+ + D +H ++ + V + ++ + + I E+ L + Sbjct: 121 HVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQIRSQVMTHLRVIYERMNQSLSLL 180 Query: 256 WNWRACEAAKKTKADDRGTDEKT-SEQTILNMISQSSSDTTIAGLMSMSTSTTSAVPSLP 314 +N A + + D+ E+ S+ + NMIS+ LM T T + V LP Sbjct: 181 YNVPAVAEEIQDEVDELLQKEQNYSDDVLANMISEPRISYGNDALMPSLTETKTTVELLP 240 Query: 315 VSEESS 320 V+ E S Sbjct: 241 VNGEFS 246 >5OMD-A nrPDB Length = 66 Score = 30.9 bits (68), Expect = 2.2, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 31/53 (58%), Gaps = 2/53 (3%) Query: 363 SLPQDGSNAFISQKQNSKSVPSAKVSLKEYRAKHAEELAAQKRQLENMEANVK 415 S+ +D N +++ K++ + KV+ E + KH +ELA K++L+ +E K Sbjct: 6 SMLRDKINFLNIEREKEKNIQAVKVN--ELQVKHLQELAKLKQELQKLEDEKK 56 >6FF7-0 nrPDB Length = 396 Score = 28.9 bits (63), Expect = 7.3, Method: Composition-based stats. Identities = 20/84 (23%), Positives = 30/84 (35%), Gaps = 3/84 (3%) Query: 463 RIPVAGGDKAA---SSKPEEIKMRIKVHAAADKHNSVEDSVTKSREHKEKHKTHPSNHHH 519 R P +KA+ S P + R H+ ED + RE ++ + H Sbjct: 75 RSPPKKKNKASGRRSKSPRSKRNRSPHHSTVKVKQEREDHPRRGREDRQHREPSEQEHRR 134 Query: 520 HHNHHSHKHSHSQLPVGTGNKRPG 543 N +H T N+RPG Sbjct: 135 ARNSDRDRHRGHSHQRRTSNERPG 158 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.302 0.127 0.368 Lambda K H 0.267 0.0383 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 27,654,592 Number of Sequences: 36641 Number of extensions: 1181712 Number of successful extensions: 48574 Number of sequences better than 10.0: 321 Number of HSP's better than 10.0 without gapping: 539 Number of HSP's successfully gapped in prelim test: 133 Number of HSP's that attempted gapping in prelim test: 42676 Number of HSP's gapped (non-prelim): 4190 length of query: 726 length of database: 10,336,785 effective HSP length: 104 effective length of query: 622 effective length of database: 6,526,121 effective search space: 4059247262 effective search space used: 4059247262 T: 11 A: 40 X1: 16 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.2 bits) S2: 63 (29.0 bits)