BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= O60502 (916 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 5M7S-A nrPDB 1905 0.0 2XSA-A nrPDB 243 4e-64 5MI4-A nrPDB 174 1e-43 5ENQ-A nrPDB 36 0.094 5AKR-A nrPDB 31 2.8 4ATG-A nrPDB 31 2.9 2Y1A-A nrPDB 30 3.2 3RIW-A nrPDB 30 4.0 3JVN-A nrPDB 30 4.8 >5M7S-A nrPDB Length = 916 Score = 1905 bits (4934), Expect = 0.0, Method: Compositional matrix adjust. Identities = 916/916 (100%), Positives = 916/916 (100%) Query: 1 MVQKESQATLEERESELSSNPAASAGASLEPPAAPAPGEDNPAGAGGAAVAGAAGGARRF 60 MVQKESQATLEERESELSSNPAASAGASLEPPAAPAPGEDNPAGAGGAAVAGAAGGARRF Sbjct: 1 MVQKESQATLEERESELSSNPAASAGASLEPPAAPAPGEDNPAGAGGAAVAGAAGGARRF 60 Query: 61 LCGVVEGFYGRPWVMEQRKELFRRLQKWELNTYLYAPKDDYKHRMFWREMYSVEEAEQLM 120 LCGVVEGFYGRPWVMEQRKELFRRLQKWELNTYLYAPKDDYKHRMFWREMYSVEEAEQLM Sbjct: 61 LCGVVEGFYGRPWVMEQRKELFRRLQKWELNTYLYAPKDDYKHRMFWREMYSVEEAEQLM 120 Query: 121 TLISAAREYEIEFIYAISPGLDITFSNPKEVSTLKRKLDQVSQFGCRSFALLFDDIDHNM 180 TLISAAREYEIEFIYAISPGLDITFSNPKEVSTLKRKLDQVSQFGCRSFALLFDDIDHNM Sbjct: 121 TLISAAREYEIEFIYAISPGLDITFSNPKEVSTLKRKLDQVSQFGCRSFALLFDDIDHNM 180 Query: 181 CAADKEVFSSFAHAQVSITNEIYQYLGEPETFLFCPTEYCGTFCYPNVSQSPYLRTVGEK 240 CAADKEVFSSFAHAQVSITNEIYQYLGEPETFLFCPTEYCGTFCYPNVSQSPYLRTVGEK Sbjct: 181 CAADKEVFSSFAHAQVSITNEIYQYLGEPETFLFCPTEYCGTFCYPNVSQSPYLRTVGEK 240 Query: 241 LLPGIEVLWTGPKVVSKEIPVESIEEVSKIIKRAPVIWDNIHANDYDQKRLFLGPYKGRS 300 LLPGIEVLWTGPKVVSKEIPVESIEEVSKIIKRAPVIWDNIHANDYDQKRLFLGPYKGRS Sbjct: 241 LLPGIEVLWTGPKVVSKEIPVESIEEVSKIIKRAPVIWDNIHANDYDQKRLFLGPYKGRS 300 Query: 301 TELIPRLKGVLTNPNCEFEANYVAIHTLATWYKSNMNGVRKDVVMTDSEDSTVSIQIKLE 360 TELIPRLKGVLTNPNCEFEANYVAIHTLATWYKSNMNGVRKDVVMTDSEDSTVSIQIKLE Sbjct: 301 TELIPRLKGVLTNPNCEFEANYVAIHTLATWYKSNMNGVRKDVVMTDSEDSTVSIQIKLE 360 Query: 361 NEGSDEDIETDVLYSPQMALKLALTEWLQEFGVPHQYSSRQVAHSGAKASVVDGTPLVAA 420 NEGSDEDIETDVLYSPQMALKLALTEWLQEFGVPHQYSSRQVAHSGAKASVVDGTPLVAA Sbjct: 361 NEGSDEDIETDVLYSPQMALKLALTEWLQEFGVPHQYSSRQVAHSGAKASVVDGTPLVAA 420 Query: 421 PSLNATTVVTTVYQEPIMSQGAALSGEPTTLTKEEEKKQPDEEPMDMVVEKQEETDHKND 480 PSLNATTVVTTVYQEPIMSQGAALSGEPTTLTKEEEKKQPDEEPMDMVVEKQEETDHKND Sbjct: 421 PSLNATTVVTTVYQEPIMSQGAALSGEPTTLTKEEEKKQPDEEPMDMVVEKQEETDHKND 480 Query: 481 NQILSEIVEAKMAEELKPMDTDKESIAESKSPEMSMQEDCISDIAPMQTDEQTNKEQFVP 540 NQILSEIVEAKMAEELKPMDTDKESIAESKSPEMSMQEDCISDIAPMQTDEQTNKEQFVP Sbjct: 481 NQILSEIVEAKMAEELKPMDTDKESIAESKSPEMSMQEDCISDIAPMQTDEQTNKEQFVP 540 Query: 541 GPNEKPLYTAEPVTLEDLQLLADLFYLPYEHGPKGAQMLREFQWLRANSSVVSVNCKGKD 600 GPNEKPLYTAEPVTLEDLQLLADLFYLPYEHGPKGAQMLREFQWLRANSSVVSVNCKGKD Sbjct: 541 GPNEKPLYTAEPVTLEDLQLLADLFYLPYEHGPKGAQMLREFQWLRANSSVVSVNCKGKD 600 Query: 601 SEKIEEWRSRAAKFEEMCGLVMGMFTRLSNCANRTILYDMYSYVWDIKSIMSMVKSFVQW 660 SEKIEEWRSRAAKFEEMCGLVMGMFTRLSNCANRTILYDMYSYVWDIKSIMSMVKSFVQW Sbjct: 601 SEKIEEWRSRAAKFEEMCGLVMGMFTRLSNCANRTILYDMYSYVWDIKSIMSMVKSFVQW 660 Query: 661 LGCRSHSSAQFLIGDQEPWAFRGGLAGEFQRLLPIDGANDLFFQPPPLTPTSKVYTIRPY 720 LGCRSHSSAQFLIGDQEPWAFRGGLAGEFQRLLPIDGANDLFFQPPPLTPTSKVYTIRPY Sbjct: 661 LGCRSHSSAQFLIGDQEPWAFRGGLAGEFQRLLPIDGANDLFFQPPPLTPTSKVYTIRPY 720 Query: 721 FPKDEASVYKICREMYDDGVGLPFQSQPDLIGDKLVGGLLSLSLDYCFVLEDEDGICGYA 780 FPKDEASVYKICREMYDDGVGLPFQSQPDLIGDKLVGGLLSLSLDYCFVLEDEDGICGYA Sbjct: 721 FPKDEASVYKICREMYDDGVGLPFQSQPDLIGDKLVGGLLSLSLDYCFVLEDEDGICGYA 780 Query: 781 LGTVDVTPFIKKCKISWIPFMQEKYTKPNGDKELSEAEKIMLSFHEEQEVLPETFLANFP 840 LGTVDVTPFIKKCKISWIPFMQEKYTKPNGDKELSEAEKIMLSFHEEQEVLPETFLANFP Sbjct: 781 LGTVDVTPFIKKCKISWIPFMQEKYTKPNGDKELSEAEKIMLSFHEEQEVLPETFLANFP 840 Query: 841 SLIKMDIHKKVTDPSVAKSMMACLLSSLKANGSRGAFCEVRPDDKRILEFYSKLGCFEIA 900 SLIKMDIHKKVTDPSVAKSMMACLLSSLKANGSRGAFCEVRPDDKRILEFYSKLGCFEIA Sbjct: 841 SLIKMDIHKKVTDPSVAKSMMACLLSSLKANGSRGAFCEVRPDDKRILEFYSKLGCFEIA 900 Query: 901 KMEGFPKDVVILGRSL 916 KMEGFPKDVVILGRSL Sbjct: 901 KMEGFPKDVVILGRSL 916 >2XSA-A nrPDB Length = 447 Score = 243 bits (619), Expect = 4e-64, Method: Compositional matrix adjust. Identities = 113/271 (41%), Positives = 167/271 (61%) Query: 61 LCGVVEGFYGRPWVMEQRKELFRRLQKWELNTYLYAPKDDYKHRMFWREMYSVEEAEQLM 120 L GV+EGFYGR W ++R + + +NTY+Y PKDD R WR Y +L Sbjct: 2 LTGVIEGFYGRDWRRDERATVMDWIAAAGMNTYIYGPKDDVHVRARWRVPYDAAGLARLT 61 Query: 121 TLISAAREYEIEFIYAISPGLDITFSNPKEVSTLKRKLDQVSQFGCRSFALLFDDIDHNM 180 L AA + F +++P LD+T+S+P++ + L ++DQ+++ G R+ LLFDDI + Sbjct: 62 ELRDAAAARGMVFYVSLAPCLDVTYSDPQDRAALLARVDQLARAGLRNLVLLFDDIPSVL 121 Query: 181 CAADKEVFSSFAHAQVSITNEIYQYLGEPETFLFCPTEYCGTFCYPNVSQSPYLRTVGEK 240 AD+ F SFA AQ ++N + ++L +FCPTEYCG + S YL+ +G Sbjct: 122 PEADRHRFDSFAEAQADLSNMVLRHLRGAGHVVFCPTEYCGRMAGGDPRGSAYLQRLGST 181 Query: 241 LLPGIEVLWTGPKVVSKEIPVESIEEVSKIIKRAPVIWDNIHANDYDQKRLFLGPYKGRS 300 L P I++ WTGP++VS+EI + V ++++R PVIWDN HANDYD +R+F GP GRS Sbjct: 182 LDPAIDIFWTGPEIVSEEIVAAHLAAVGEVLRRRPVIWDNFHANDYDIRRVFAGPLGGRS 241 Query: 301 TELIPRLKGVLTNPNCEFEANYVAIHTLATW 331 +++P + G +TNPN E EAN+ AIHT + Sbjct: 242 RDILPLVAGWITNPNNEAEANFPAIHTTGAY 272 Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 31/139 (22%), Positives = 60/139 (43%), Gaps = 9/139 (6%) Query: 558 LQLLADLFYLPYEHGPKGAQMLREFQWLRANSSVVSVNCKGKDSEKIEEWRSRAAKFEEM 617 + LL DLF+ P+ GP+ ++L LRA +V + WR+ ++ Sbjct: 309 VALLCDLFWQPFALGPETTRILSA---LRAALTV------PRPDPSDPAWRAALEDLRDL 359 Query: 618 CGLVMGMFTRLSNCANRTILYDMYSYVWDIKSIMSMVKSFVQWLGCRSHSSAQFLIGDQE 677 + +FT ++ NR + + ++Y+W+ + + + ++ WL A F D+ Sbjct: 360 KRRINKLFTLMTEIENRDLFHTFHNYLWEAQEEVGHLVAYCDWLDEAPPPGAVFPATDRI 419 Query: 678 PWAFRGGLAGEFQRLLPID 696 +R G Q +L D Sbjct: 420 HNFYRRGFGVAVQDILQRD 438 >5MI4-A nrPDB Length = 727 Score = 174 bits (442), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 100/270 (37%), Positives = 151/270 (55%), Gaps = 11/270 (4%) Query: 63 GVVEGFYGRPWVMEQRKELFRRLQKWELNTYLYAPKDD-YKHRMFWREMYSVEEAEQLMT 121 GVVEGFYG PW + R + K ++NTY+Y PKDD Y WR Y +EA QL Sbjct: 142 GVVEGFYGTPWSHQARLSQLKFYGKNKMNTYIYGPKDDPYHSAPNWRLPYPDKEAAQLQE 201 Query: 122 LISAAREYEIEFIYAISPGLDITFSNPKEVSTLKRKLDQVSQFGCRSFALLFDDIDHNMC 181 L++ A E E++F++AI PG DI + N ++ L K +++ Q G RSFA+ FDDI Sbjct: 202 LVAVANENEVDFVWAIHPGQDIKW-NKEDRDLLLAKFEKMYQLGVRSFAVFFDDISGEGT 260 Query: 182 AADKEVFSSFAHAQVSITNEIYQYLGEPETFLFCPTEYCGTFCYPNVSQSPYLRTVGEKL 241 K+ A I + Q + + CPTEY ++ PN + YL T+G+KL Sbjct: 261 NPQKQ-----AELLNYIDEKFAQVKPDINQLVMCPTEYNKSWSNPNGN---YLTTLGDKL 312 Query: 242 LPGIEVLWTGPKVVSKEIPVESIEEVSKIIKRAPVIWDNIHANDYDQKRLFLGPYKGRST 301 P I+++WTG +V+S +I + I +++ IKR IW N +DY + L LGP G T Sbjct: 313 NPSIQIMWTGDRVIS-DITRDGISWINERIKRPAYIWWNFPVSDYVRDHLLLGPVYGNDT 371 Query: 302 ELIPRLKGVLTNPNCEFEANYVAIHTLATW 331 + + G +TNP E++ +AI+++A++ Sbjct: 372 TIAKEMSGFVTNPMEHAESSKIAIYSVASY 401 >5ENQ-A nrPDB Length = 609 Score = 35.8 bits (81), Expect = 0.094, Method: Compositional matrix adjust. Identities = 27/75 (36%), Positives = 43/75 (57%), Gaps = 3/75 (4%) Query: 327 TLATWYKSNMNGVRKDVVMTDSEDSTVSIQIKLENE-GSDEDI-ETDVLYSPQMALKLAL 384 T+ + NMNG+ + M+ + DST ++QI L E G+D DI + V Q+A+ L L Sbjct: 22 TVTQVIEQNMNGIDNLMYMSSNSDSTGTVQITLTFESGTDADIAQVQVQNKLQLAMPL-L 80 Query: 385 TEWLQEFGVPHQYSS 399 + +Q+ GV + SS Sbjct: 81 PQEVQQQGVSVEKSS 95 >5AKR-A nrPDB Length = 378 Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust. Identities = 27/69 (39%), Positives = 32/69 (46%), Gaps = 10/69 (14%) Query: 678 PWAFRGGLAGEFQRLLPIDGANDLFFQPPPLTPTSKVYTIRP---YFPKDEASVYK---I 731 PW G+ G +LP DG D QP LT K+Y + Y PKDEA YK Sbjct: 181 PWHVTSGMNGAIM-VLPRDGLKDEKGQP--LT-YDKIYYVGEQDFYVPKDEAGNYKKYET 236 Query: 732 CREMYDDGV 740 E Y+D V Sbjct: 237 PGEAYEDAV 245 >4ATG-A nrPDB Length = 196 Score = 30.8 bits (68), Expect = 2.9, Method: Compositional matrix adjust. Identities = 33/145 (22%), Positives = 57/145 (39%), Gaps = 22/145 (15%) Query: 198 ITNEIYQYLGEPETFLFCPTEYCGTFCYPNVSQSPYLRTVGEKLLPGIEVLWTGPKVVSK 257 I+ I + E E C Y +V PYL ++LP + G +V Sbjct: 49 ISELILKSFKEAEVLKTCIALYFSLIKNKHVFIDPYL----HQILPSLLTCVIGKSIVDD 104 Query: 258 EIPVESIEEVSKIIKRAPVIWDNIHANDYDQKRLFLGPYKGRSTELIPRLKGVLTNPNCE 317 ++ S + V I YD + YK + ++ LKGV +PN Sbjct: 105 DVRKMSADIVKYI---------------YDT---YSRSYKTLAPRVLKTLKGVWMDPNRS 146 Query: 318 FEANYVAIHTLATWYKSNMNGVRKD 342 ++ Y A++ L+ K+ +N V ++ Sbjct: 147 EDSQYGALYCLSILSKNVVNTVIRE 171 >2Y1A-A nrPDB Length = 340 Score = 30.4 bits (67), Expect = 3.2, Method: Compositional matrix adjust. Identities = 27/69 (39%), Positives = 32/69 (46%), Gaps = 10/69 (14%) Query: 678 PWAFRGGLAGEFQRLLPIDGANDLFFQPPPLTPTSKVYTIRP---YFPKDEASVYK---I 731 PW G+ G +LP DG D QP LT K+Y + Y PKDEA YK Sbjct: 143 PWHVTSGMNGAIM-VLPRDGLKDEKGQP--LT-YDKIYYVGEQDFYVPKDEAGNYKKYET 198 Query: 732 CREMYDDGV 740 E Y+D V Sbjct: 199 PGEAYEDAV 207 >3RIW-A nrPDB Length = 271 Score = 30.4 bits (67), Expect = 4.0, Method: Compositional matrix adjust. Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 3/59 (5%) Query: 104 RMFWREMYSVEEAEQLMTLISAAREYEIEFIYAISPGLDITFSNPKEVSTLKRKLDQVS 162 R+ W E S + ++ + SA+ ++ E +YA + GLDI K + TLK+K Q+S Sbjct: 32 RLAWHEAASYDCFKKDGSPNSASMRFKPECLYAGNKGLDIP---RKALETLKKKYPQIS 87 >3JVN-A nrPDB Length = 166 Score = 30.0 bits (66), Expect = 4.8, Method: Compositional matrix adjust. Identities = 19/60 (31%), Positives = 30/60 (50%) Query: 836 LANFPSLIKMDIHKKVTDPSVAKSMMACLLSSLKANGSRGAFCEVRPDDKRILEFYSKLG 895 L ++ ++ I K+ VA+ +M + LK G + F EV +K LEFY+K G Sbjct: 85 LVMMATIDELYIEKEYRREGVAEQLMMRIEQELKDYGVKEIFVEVWDFNKGALEFYNKQG 144 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 5M7S-A nrPDB 1796 0.0 2XSA-A nrPDB 456 e-128 5MI4-A nrPDB 419 e-117 Sequences not found previously or not previously below threshold: 5ENQ-A nrPDB 39 0.011 4ATG-A nrPDB 35 0.20 6HTS-H nrPDB 34 0.30 2I1J-A nrPDB 32 0.86 4ZRX-A nrPDB 32 1.2 1CPT-A nrPDB 32 1.2 5CI9-A nrPDB 32 1.3 3JVN-A nrPDB 30 4.0 3IS0-X nrPDB 30 5.0 1IM2-A nrPDB 30 6.4 5GAD-l nrPDB 30 6.6 2YUH-A nrPDB 29 7.1 2B20-A nrPDB 29 7.3 CONVERGED! >5M7S-A nrPDB Length = 916 Score = 1796 bits (4651), Expect = 0.0, Method: Composition-based stats. Identities = 916/916 (100%), Positives = 916/916 (100%) Query: 1 MVQKESQATLEERESELSSNPAASAGASLEPPAAPAPGEDNPAGAGGAAVAGAAGGARRF 60 MVQKESQATLEERESELSSNPAASAGASLEPPAAPAPGEDNPAGAGGAAVAGAAGGARRF Sbjct: 1 MVQKESQATLEERESELSSNPAASAGASLEPPAAPAPGEDNPAGAGGAAVAGAAGGARRF 60 Query: 61 LCGVVEGFYGRPWVMEQRKELFRRLQKWELNTYLYAPKDDYKHRMFWREMYSVEEAEQLM 120 LCGVVEGFYGRPWVMEQRKELFRRLQKWELNTYLYAPKDDYKHRMFWREMYSVEEAEQLM Sbjct: 61 LCGVVEGFYGRPWVMEQRKELFRRLQKWELNTYLYAPKDDYKHRMFWREMYSVEEAEQLM 120 Query: 121 TLISAAREYEIEFIYAISPGLDITFSNPKEVSTLKRKLDQVSQFGCRSFALLFDDIDHNM 180 TLISAAREYEIEFIYAISPGLDITFSNPKEVSTLKRKLDQVSQFGCRSFALLFDDIDHNM Sbjct: 121 TLISAAREYEIEFIYAISPGLDITFSNPKEVSTLKRKLDQVSQFGCRSFALLFDDIDHNM 180 Query: 181 CAADKEVFSSFAHAQVSITNEIYQYLGEPETFLFCPTEYCGTFCYPNVSQSPYLRTVGEK 240 CAADKEVFSSFAHAQVSITNEIYQYLGEPETFLFCPTEYCGTFCYPNVSQSPYLRTVGEK Sbjct: 181 CAADKEVFSSFAHAQVSITNEIYQYLGEPETFLFCPTEYCGTFCYPNVSQSPYLRTVGEK 240 Query: 241 LLPGIEVLWTGPKVVSKEIPVESIEEVSKIIKRAPVIWDNIHANDYDQKRLFLGPYKGRS 300 LLPGIEVLWTGPKVVSKEIPVESIEEVSKIIKRAPVIWDNIHANDYDQKRLFLGPYKGRS Sbjct: 241 LLPGIEVLWTGPKVVSKEIPVESIEEVSKIIKRAPVIWDNIHANDYDQKRLFLGPYKGRS 300 Query: 301 TELIPRLKGVLTNPNCEFEANYVAIHTLATWYKSNMNGVRKDVVMTDSEDSTVSIQIKLE 360 TELIPRLKGVLTNPNCEFEANYVAIHTLATWYKSNMNGVRKDVVMTDSEDSTVSIQIKLE Sbjct: 301 TELIPRLKGVLTNPNCEFEANYVAIHTLATWYKSNMNGVRKDVVMTDSEDSTVSIQIKLE 360 Query: 361 NEGSDEDIETDVLYSPQMALKLALTEWLQEFGVPHQYSSRQVAHSGAKASVVDGTPLVAA 420 NEGSDEDIETDVLYSPQMALKLALTEWLQEFGVPHQYSSRQVAHSGAKASVVDGTPLVAA Sbjct: 361 NEGSDEDIETDVLYSPQMALKLALTEWLQEFGVPHQYSSRQVAHSGAKASVVDGTPLVAA 420 Query: 421 PSLNATTVVTTVYQEPIMSQGAALSGEPTTLTKEEEKKQPDEEPMDMVVEKQEETDHKND 480 PSLNATTVVTTVYQEPIMSQGAALSGEPTTLTKEEEKKQPDEEPMDMVVEKQEETDHKND Sbjct: 421 PSLNATTVVTTVYQEPIMSQGAALSGEPTTLTKEEEKKQPDEEPMDMVVEKQEETDHKND 480 Query: 481 NQILSEIVEAKMAEELKPMDTDKESIAESKSPEMSMQEDCISDIAPMQTDEQTNKEQFVP 540 NQILSEIVEAKMAEELKPMDTDKESIAESKSPEMSMQEDCISDIAPMQTDEQTNKEQFVP Sbjct: 481 NQILSEIVEAKMAEELKPMDTDKESIAESKSPEMSMQEDCISDIAPMQTDEQTNKEQFVP 540 Query: 541 GPNEKPLYTAEPVTLEDLQLLADLFYLPYEHGPKGAQMLREFQWLRANSSVVSVNCKGKD 600 GPNEKPLYTAEPVTLEDLQLLADLFYLPYEHGPKGAQMLREFQWLRANSSVVSVNCKGKD Sbjct: 541 GPNEKPLYTAEPVTLEDLQLLADLFYLPYEHGPKGAQMLREFQWLRANSSVVSVNCKGKD 600 Query: 601 SEKIEEWRSRAAKFEEMCGLVMGMFTRLSNCANRTILYDMYSYVWDIKSIMSMVKSFVQW 660 SEKIEEWRSRAAKFEEMCGLVMGMFTRLSNCANRTILYDMYSYVWDIKSIMSMVKSFVQW Sbjct: 601 SEKIEEWRSRAAKFEEMCGLVMGMFTRLSNCANRTILYDMYSYVWDIKSIMSMVKSFVQW 660 Query: 661 LGCRSHSSAQFLIGDQEPWAFRGGLAGEFQRLLPIDGANDLFFQPPPLTPTSKVYTIRPY 720 LGCRSHSSAQFLIGDQEPWAFRGGLAGEFQRLLPIDGANDLFFQPPPLTPTSKVYTIRPY Sbjct: 661 LGCRSHSSAQFLIGDQEPWAFRGGLAGEFQRLLPIDGANDLFFQPPPLTPTSKVYTIRPY 720 Query: 721 FPKDEASVYKICREMYDDGVGLPFQSQPDLIGDKLVGGLLSLSLDYCFVLEDEDGICGYA 780 FPKDEASVYKICREMYDDGVGLPFQSQPDLIGDKLVGGLLSLSLDYCFVLEDEDGICGYA Sbjct: 721 FPKDEASVYKICREMYDDGVGLPFQSQPDLIGDKLVGGLLSLSLDYCFVLEDEDGICGYA 780 Query: 781 LGTVDVTPFIKKCKISWIPFMQEKYTKPNGDKELSEAEKIMLSFHEEQEVLPETFLANFP 840 LGTVDVTPFIKKCKISWIPFMQEKYTKPNGDKELSEAEKIMLSFHEEQEVLPETFLANFP Sbjct: 781 LGTVDVTPFIKKCKISWIPFMQEKYTKPNGDKELSEAEKIMLSFHEEQEVLPETFLANFP 840 Query: 841 SLIKMDIHKKVTDPSVAKSMMACLLSSLKANGSRGAFCEVRPDDKRILEFYSKLGCFEIA 900 SLIKMDIHKKVTDPSVAKSMMACLLSSLKANGSRGAFCEVRPDDKRILEFYSKLGCFEIA Sbjct: 841 SLIKMDIHKKVTDPSVAKSMMACLLSSLKANGSRGAFCEVRPDDKRILEFYSKLGCFEIA 900 Query: 901 KMEGFPKDVVILGRSL 916 KMEGFPKDVVILGRSL Sbjct: 901 KMEGFPKDVVILGRSL 916 >2XSA-A nrPDB Length = 447 Score = 456 bits (1174), Expect = e-128, Method: Composition-based stats. Identities = 113/271 (41%), Positives = 167/271 (61%) Query: 61 LCGVVEGFYGRPWVMEQRKELFRRLQKWELNTYLYAPKDDYKHRMFWREMYSVEEAEQLM 120 L GV+EGFYGR W ++R + + +NTY+Y PKDD R WR Y +L Sbjct: 2 LTGVIEGFYGRDWRRDERATVMDWIAAAGMNTYIYGPKDDVHVRARWRVPYDAAGLARLT 61 Query: 121 TLISAAREYEIEFIYAISPGLDITFSNPKEVSTLKRKLDQVSQFGCRSFALLFDDIDHNM 180 L AA + F +++P LD+T+S+P++ + L ++DQ+++ G R+ LLFDDI + Sbjct: 62 ELRDAAAARGMVFYVSLAPCLDVTYSDPQDRAALLARVDQLARAGLRNLVLLFDDIPSVL 121 Query: 181 CAADKEVFSSFAHAQVSITNEIYQYLGEPETFLFCPTEYCGTFCYPNVSQSPYLRTVGEK 240 AD+ F SFA AQ ++N + ++L +FCPTEYCG + S YL+ +G Sbjct: 122 PEADRHRFDSFAEAQADLSNMVLRHLRGAGHVVFCPTEYCGRMAGGDPRGSAYLQRLGST 181 Query: 241 LLPGIEVLWTGPKVVSKEIPVESIEEVSKIIKRAPVIWDNIHANDYDQKRLFLGPYKGRS 300 L P I++ WTGP++VS+EI + V ++++R PVIWDN HANDYD +R+F GP GRS Sbjct: 182 LDPAIDIFWTGPEIVSEEIVAAHLAAVGEVLRRRPVIWDNFHANDYDIRRVFAGPLGGRS 241 Query: 301 TELIPRLKGVLTNPNCEFEANYVAIHTLATW 331 +++P + G +TNPN E EAN+ AIHT + Sbjct: 242 RDILPLVAGWITNPNNEAEANFPAIHTTGAY 272 Score = 223 bits (569), Expect = 2e-58, Method: Composition-based stats. Identities = 31/139 (22%), Positives = 60/139 (43%), Gaps = 9/139 (6%) Query: 558 LQLLADLFYLPYEHGPKGAQMLREFQWLRANSSVVSVNCKGKDSEKIEEWRSRAAKFEEM 617 + LL DLF+ P+ GP+ ++L LRA +V + WR+ ++ Sbjct: 309 VALLCDLFWQPFALGPETTRILSA---LRAALTV------PRPDPSDPAWRAALEDLRDL 359 Query: 618 CGLVMGMFTRLSNCANRTILYDMYSYVWDIKSIMSMVKSFVQWLGCRSHSSAQFLIGDQE 677 + +FT ++ NR + + ++Y+W+ + + + ++ WL A F D+ Sbjct: 360 KRRINKLFTLMTEIENRDLFHTFHNYLWEAQEEVGHLVAYCDWLDEAPPPGAVFPATDRI 419 Query: 678 PWAFRGGLAGEFQRLLPID 696 +R G Q +L D Sbjct: 420 HNFYRRGFGVAVQDILQRD 438 >5MI4-A nrPDB Length = 727 Score = 419 bits (1077), Expect = e-117, Method: Composition-based stats. Identities = 100/270 (37%), Positives = 151/270 (55%), Gaps = 11/270 (4%) Query: 63 GVVEGFYGRPWVMEQRKELFRRLQKWELNTYLYAPKDD-YKHRMFWREMYSVEEAEQLMT 121 GVVEGFYG PW + R + K ++NTY+Y PKDD Y WR Y +EA QL Sbjct: 142 GVVEGFYGTPWSHQARLSQLKFYGKNKMNTYIYGPKDDPYHSAPNWRLPYPDKEAAQLQE 201 Query: 122 LISAAREYEIEFIYAISPGLDITFSNPKEVSTLKRKLDQVSQFGCRSFALLFDDIDHNMC 181 L++ A E E++F++AI PG DI + N ++ L K +++ Q G RSFA+ FDDI Sbjct: 202 LVAVANENEVDFVWAIHPGQDIKW-NKEDRDLLLAKFEKMYQLGVRSFAVFFDDISGEGT 260 Query: 182 AADKEVFSSFAHAQVSITNEIYQYLGEPETFLFCPTEYCGTFCYPNVSQSPYLRTVGEKL 241 K+ A I + Q + + CPTEY ++ PN + YL T+G+KL Sbjct: 261 NPQKQ-----AELLNYIDEKFAQVKPDINQLVMCPTEYNKSWSNPNGN---YLTTLGDKL 312 Query: 242 LPGIEVLWTGPKVVSKEIPVESIEEVSKIIKRAPVIWDNIHANDYDQKRLFLGPYKGRST 301 P I+++WTG +V+S +I + I +++ IKR IW N +DY + L LGP G T Sbjct: 313 NPSIQIMWTGDRVIS-DITRDGISWINERIKRPAYIWWNFPVSDYVRDHLLLGPVYGNDT 371 Query: 302 ELIPRLKGVLTNPNCEFEANYVAIHTLATW 331 + + G +TNP E++ +AI+++A++ Sbjct: 372 TIAKEMSGFVTNPMEHAESSKIAIYSVASY 401 >5ENQ-A nrPDB Length = 609 Score = 38.9 bits (89), Expect = 0.011, Method: Composition-based stats. Identities = 27/75 (36%), Positives = 43/75 (57%), Gaps = 3/75 (4%) Query: 327 TLATWYKSNMNGVRKDVVMTDSEDSTVSIQIKLENE-GSDEDI-ETDVLYSPQMALKLAL 384 T+ + NMNG+ + M+ + DST ++QI L E G+D DI + V Q+A+ L L Sbjct: 22 TVTQVIEQNMNGIDNLMYMSSNSDSTGTVQITLTFESGTDADIAQVQVQNKLQLAMPL-L 80 Query: 385 TEWLQEFGVPHQYSS 399 + +Q+ GV + SS Sbjct: 81 PQEVQQQGVSVEKSS 95 >4ATG-A nrPDB Length = 196 Score = 34.7 bits (78), Expect = 0.20, Method: Composition-based stats. Identities = 34/146 (23%), Positives = 59/146 (40%), Gaps = 22/146 (15%) Query: 197 SITNEIYQYLGEPETFLFCPTEYCGTFCYPNVSQSPYLRTVGEKLLPGIEVLWTGPKVVS 256 I+ I + E E C Y +V PYL ++LP + G +V Sbjct: 48 HISELILKSFKEAEVLKTCIALYFSLIKNKHVFIDPYLH----QILPSLLTCVIGKSIVD 103 Query: 257 KEIPVESIEEVSKIIKRAPVIWDNIHANDYDQKRLFLGPYKGRSTELIPRLKGVLTNPNC 316 ++ S + I+K I+D Y + L P ++ LKGV +PN Sbjct: 104 DDVRKMS----ADIVK---YIYDT-----YSRSYKTLAP------RVLKTLKGVWMDPNR 145 Query: 317 EFEANYVAIHTLATWYKSNMNGVRKD 342 ++ Y A++ L+ K+ +N V ++ Sbjct: 146 SEDSQYGALYCLSILSKNVVNTVIRE 171 >6HTS-H nrPDB Length = 607 Score = 33.9 bits (76), Expect = 0.30, Method: Composition-based stats. Identities = 37/168 (22%), Positives = 68/168 (40%), Gaps = 39/168 (23%) Query: 453 KEEEKKQPDEEPMDMVVEKQEETDHKNDNQILSEIVEAKM--AEELK--------PMDTD 502 + EEK Q D+E +D ++ QE + +Q ++E M EEL+ ++ Sbjct: 312 RREEKLQLDQERLDRLLYVQELLEDGQMDQFHKALIELNMDSPEELQSYIQKLSIAVEQA 371 Query: 503 KESIAES-------------KSPEMSMQEDCISDIAPMQTDEQTNKEQFVPGPNEKPLYT 549 K+ I ++ ++P++ E + D+ M + E+ PG EKP+ T Sbjct: 372 KQKILQAEVNLEVDVVDSKPETPDLEQLEPSLEDVESMNDFDPLFSEE-TPGV-EKPVTT 429 Query: 550 AEPVTLEDLQLLADLF------------YLPYEHGPKGAQMLREFQWL 585 +PV +L LF + P G + A + Q++ Sbjct: 430 VQPVF--NLAAYHQLFVGTERIRAPEIIFQPSLIGEEQAGIAETLQYI 475 >2I1J-A nrPDB Length = 575 Score = 32.4 bits (72), Expect = 0.86, Method: Composition-based stats. Identities = 23/102 (22%), Positives = 47/102 (46%), Gaps = 3/102 (2%) Query: 456 EKKQPDEEPMDMVVEKQEETDHKNDNQILSEIVEAKMAEELKPMDTDKESIAESKSPEMS 515 EKKQ +E D + + QEE + N + ++ + ++ E+L+ + KE + E + E+ Sbjct: 334 EKKQ--QEYQDRLRQMQEEMERSQANLLEAQDMILRLEEQLRQLQAAKEEL-EQRQNELQ 390 Query: 516 MQEDCISDIAPMQTDEQTNKEQFVPGPNEKPLYTAEPVTLED 557 + + M+ E+ E + E+ + V L+D Sbjct: 391 AMMQRLEETKNMEAAERQKLEDEIRAKQEEVSRIQQEVELKD 432 >4ZRX-A nrPDB Length = 586 Score = 32.0 bits (71), Expect = 1.2, Method: Composition-based stats. Identities = 15/89 (16%), Positives = 35/89 (39%), Gaps = 3/89 (3%) Query: 110 MYSVEEAEQLMTLISAAREYEIEFIYAISP---GLDITFSNPKEVSTLKRKLDQVSQFGC 166 + + + + L +A +Y+++F +SP + +P+ R+L ++ Sbjct: 118 PWKNGQGDVVKELRAACDKYDMKFGVYLSPWDRNAECYGDSPRYNDFFIRQLTELLTNYG 177 Query: 167 RSFALLFDDIDHNMCAADKEVFSSFAHAQ 195 + FD + K+V+ A Q Sbjct: 178 EVHEVWFDGANGEGPNGKKQVYDWDAFYQ 206 >1CPT-A nrPDB Length = 428 Score = 32.0 bits (71), Expect = 1.2, Method: Composition-based stats. Identities = 40/187 (21%), Positives = 62/187 (33%), Gaps = 27/187 (14%) Query: 578 MLREFQWLRANSSVVSVNCKGKDSEKIEEWRS-RAAKFEEMCGLVMGMFTRLSNCANRTI 636 + F+WLR + + +G D W + + A ++ G G+F SN I Sbjct: 27 IYPAFKWLRDEQPLAMAHIEGYD----PMWIATKHADVMQI-GKQPGLF---SNAEGSEI 78 Query: 637 LYDMYSYVWDIKSIMSMVKSFVQWLGCRSHSSAQFLIGDQEPWA-----------FRGGL 685 LYD + + ++SI + L + G W R Sbjct: 79 LYDQNNEAF-MRSISGGCPHVIDSLTSMDPPTHTAYRGLTLNWFQPASIRKLEENIRRIA 137 Query: 686 AGEFQRLLPIDGANDLFFQPPPLTPTSKVYTIRPYFPKDEASVYKICREMY------DDG 739 QRLL DG D P V T DE + K+ ++ + + Sbjct: 138 QASVQRLLDFDGECDFMTDCALYYPLHVVMTALGVPEDDEPLMLKLTQDFFGVHEPDEQA 197 Query: 740 VGLPFQS 746 V P QS Sbjct: 198 VAAPRQS 204 >5CI9-A nrPDB Length = 346 Score = 32.0 bits (71), Expect = 1.3, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 3/60 (5%) Query: 142 DITFSNPKEVSTLKRKLDQVSQFGCRS--FALLFDDIDHNMCAADKEVFSSF-AHAQVSI 198 D+ + P+++S + Q G + L DD + N C DKE+ +SF AQV + Sbjct: 82 DVRGNLPQDLSVWIDPFEVSYQIGEKGPVKVLYVDDNNENGCELDKEIKNSFNPEAQVFM 141 >3JVN-A nrPDB Length = 166 Score = 30.5 bits (67), Expect = 4.0, Method: Composition-based stats. Identities = 20/63 (31%), Positives = 31/63 (49%) Query: 836 LANFPSLIKMDIHKKVTDPSVAKSMMACLLSSLKANGSRGAFCEVRPDDKRILEFYSKLG 895 L ++ ++ I K+ VA+ +M + LK G + F EV +K LEFY+K G Sbjct: 85 LVMMATIDELYIEKEYRREGVAEQLMMRIEQELKDYGVKEIFVEVWDFNKGALEFYNKQG 144 Query: 896 CFE 898 E Sbjct: 145 LNE 147 >3IS0-X nrPDB Length = 429 Score = 30.1 bits (66), Expect = 5.0, Method: Composition-based stats. Identities = 35/175 (20%), Positives = 61/175 (34%), Gaps = 24/175 (13%) Query: 202 IYQYLGEPETFLFCPTEYCGTFCYPNVSQSPYLRTVGEKLLPGIEVLWTGPKVVSKE-IP 260 + Q +F T Y + T+ KL I+ VV + Sbjct: 1 MAQSGRNVNHLVFANTSY--EILGGGKKYNQVFMTMDGKLKIKID-YTVDDSVVEGDYFT 57 Query: 261 VESIEEVSKIIKRAPVIWDNIHANDYDQKRLFLGPYKGRSTELIPRLKGVLTNPNCEFEA 320 V+ + + R P +NIH D + + + +G Y TN Sbjct: 58 VDFGKYIHPGTSRKPYRVNNIH--DANGRTIAIGSYDS------------ATNTAKYTFT 103 Query: 321 NYVAIHTLATWYKSNMNGVRKDVVMTDSEDSTVSIQIKLENEGSDEDIETDVLYS 375 NYV I+ S ++ K++V TD + V I + + ED +V+++ Sbjct: 104 NYVDIYNNVRGSFSLLSWPFKELVTTDKQSVPVGITV------AGEDYTQNVIFN 152 >1IM2-A nrPDB Length = 444 Score = 29.7 bits (65), Expect = 6.4, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 32/78 (41%), Gaps = 5/78 (6%) Query: 291 LFLGPYKGRSTELIPRLKGVLTNPNCEFEANYVAIHTLATWYKSNMNGVRKDVVMTDSED 350 L +GP TE+ RL + P + EA T + ++ + +D +TDS Sbjct: 54 LMIGPTGVGKTEIARRLAKLANAPFIKVEATK---FTEVGYVGKEVDSIIRD--LTDSAM 108 Query: 351 STVSIQIKLENEGSDEDI 368 V Q +N ED+ Sbjct: 109 KLVRQQEIAKNRARAEDV 126 >5GAD-l nrPDB Length = 497 Score = 29.7 bits (65), Expect = 6.6, Method: Composition-based stats. Identities = 19/90 (21%), Positives = 42/90 (46%), Gaps = 1/90 (1%) Query: 472 QEETDHKNDNQILSEIVEAKMAEELKPMDTDKESIAESKSPEMSMQEDCISDIAPMQTDE 531 ++ET+ +N+ ++ EIV+A+ + +++ A +++ + D + + E Sbjct: 23 EKETEVQNEQPVVEEIVQAQEPVKASEQAVEEQPQAHTEAEAETFAADVVEVTEQVAESE 82 Query: 532 QTNKE-QFVPGPNEKPLYTAEPVTLEDLQL 560 + E + V P T EPV +E +L Sbjct: 83 KAQPEAEVVAQPEPVVEETPEPVAIEREEL 112 >2YUH-A nrPDB Length = 179 Score = 29.3 bits (64), Expect = 7.1, Method: Composition-based stats. Identities = 22/119 (18%), Positives = 40/119 (33%), Gaps = 6/119 (5%) Query: 173 FDDIDHNMCAADKEVFSSFAHAQVSITNEIYQYLGEPETFLFCPTEYCGTFCYPNVSQSP 232 F +++ + ++N + G P T C C P VS S Sbjct: 13 FSNLESQVLEKRASELHQRDVLLTELSNCTVRLYGNPNTLRLTKAHSCKLLCGP-VSTSV 71 Query: 233 YLRTVGEKLLP----GIEVLWTGPKVVSKEIPVESIEEVSKIIKRAPVIWDNIHANDYD 287 +L + +L + + T + ++ +I E I+ AP W + D D Sbjct: 72 FLEDCSDCVLAVACQQLRIHSTKDTRIFLQVTSRAIVEDCSGIQFAPYTW-SYPEIDKD 129 >2B20-A nrPDB Length = 403 Score = 29.3 bits (64), Expect = 7.3, Method: Composition-based stats. Identities = 26/118 (22%), Positives = 47/118 (39%), Gaps = 11/118 (9%) Query: 222 TFCYPNVSQSPYLRTVGEKLLPGIEVLWTGPKVVSKEIPVESIEEVSKIIKRAPVIW--- 278 ++ L L PG W P+ + EIP + I S+ +K + +W Sbjct: 135 SWKGGLGHAVSALEMPQAPLQPG----WDCPQ--APEIPAKEIIWKSERLKNSRRVWIFT 188 Query: 279 -DNIHANDYDQKRLFLGPYKGRSTELIPRLKGVLTNPNCEFEANYVAIHTLATWYKSN 335 ++ A + L G + +S + P L LT+ A YV I + T ++++ Sbjct: 189 TGDVTAEERPLAVLLDGEFWAQSMPVWPVLTS-LTHRQQLPPAVYVLIDAIDTTHRAH 245 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.312 0.131 0.373 Lambda K H 0.267 0.0402 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 36,565,689 Number of Sequences: 36641 Number of extensions: 1527210 Number of successful extensions: 4566 Number of sequences better than 10.0: 28 Number of HSP's better than 10.0 without gapping: 15 Number of HSP's successfully gapped in prelim test: 44 Number of HSP's that attempted gapping in prelim test: 4490 Number of HSP's gapped (non-prelim): 110 length of query: 916 length of database: 10,336,785 effective HSP length: 106 effective length of query: 810 effective length of database: 6,452,839 effective search space: 5226799590 effective search space used: 5226799590 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.4 bits) S2: 64 (29.3 bits)