BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= O60234 (142 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 4JD2-H nrPDB 279 4e-76 3L50-A nrPDB 278 5e-76 1V6F-A nrPDB 234 9e-63 5YNR-A nrPDB 115 9e-27 5IVU-A nrPDB 43 5e-05 1F7S-A nrPDB 42 9e-05 2W0I-A nrPDB 40 4e-04 1CNU-A nrPDB 40 5e-04 2XFA-A nrPDB 38 0.002 5BJS-A nrPDB 32 0.12 5L6W-C nrPDB 29 0.79 1QPV-A nrPDB 29 0.85 5YU8-H nrPDB 28 1.1 5ICU-A nrPDB 28 1.2 3NEM-A nrPDB 27 2.5 3JB9-R nrPDB 27 3.5 1ND4-A nrPDB 27 3.6 5ENQ-A nrPDB 25 8.0 3M4P-A nrPDB 25 9.9 >4JD2-H nrPDB Length = 142 Score = 279 bits (713), Expect = 4e-76, Method: Compositional matrix adjust. Identities = 133/142 (93%), Positives = 138/142 (97%) Query: 1 MSDSLVVCEVDPELTEKLRKFRFRKETDNAAIIMKVDKDRQMVVLEEEFQNISPEELKME 60 MSDSLVVCEVDPEL E LRKFRFRKET+NAAIIMKVDKDRQMVVLE+E QNISPEELK+E Sbjct: 1 MSDSLVVCEVDPELKETLRKFRFRKETNNAAIIMKVDKDRQMVVLEDELQNISPEELKLE 60 Query: 61 LPERQPRFVVYSYKYVHDDGRVSYPLCFIFSSPVGCKPEQQMMYAGSKNRLVQTAELTKV 120 LPERQPRFVVYSYKYVHDDGRVSYPLCFIFSSPVGCKPEQQMMYAGSKNRLVQTAELTKV Sbjct: 61 LPERQPRFVVYSYKYVHDDGRVSYPLCFIFSSPVGCKPEQQMMYAGSKNRLVQTAELTKV 120 Query: 121 FEIRTTDDLTEAWLQEKLSFFR 142 FEIRTTDDLTE WL+EKL+FFR Sbjct: 121 FEIRTTDDLTETWLKEKLAFFR 142 >3L50-A nrPDB Length = 136 Score = 278 bits (712), Expect = 5e-76, Method: Compositional matrix adjust. Identities = 134/135 (99%), Positives = 135/135 (100%) Query: 6 VVCEVDPELTEKLRKFRFRKETDNAAIIMKVDKDRQMVVLEEEFQNISPEELKMELPERQ 65 +VCEVDPELTEKLRKFRFRKETDNAAIIMKVDKDRQMVVLEEEFQNISPEELKMELPERQ Sbjct: 2 MVCEVDPELTEKLRKFRFRKETDNAAIIMKVDKDRQMVVLEEEFQNISPEELKMELPERQ 61 Query: 66 PRFVVYSYKYVHDDGRVSYPLCFIFSSPVGCKPEQQMMYAGSKNRLVQTAELTKVFEIRT 125 PRFVVYSYKYVHDDGRVSYPLCFIFSSPVGCKPEQQMMYAGSKNRLVQTAELTKVFEIRT Sbjct: 62 PRFVVYSYKYVHDDGRVSYPLCFIFSSPVGCKPEQQMMYAGSKNRLVQTAELTKVFEIRT 121 Query: 126 TDDLTEAWLQEKLSF 140 TDDLTEAWLQEKLSF Sbjct: 122 TDDLTEAWLQEKLSF 136 >1V6F-A nrPDB Length = 151 Score = 234 bits (597), Expect = 9e-63, Method: Compositional matrix adjust. Identities = 110/135 (81%), Positives = 123/135 (91%) Query: 5 LVVCEVDPELTEKLRKFRFRKETDNAAIIMKVDKDRQMVVLEEEFQNISPEELKMELPER 64 LVVC+V +L EKLRKFRFRKET NAAIIMK+DKD ++VVL+EE + +SP+ELK ELPER Sbjct: 11 LVVCDVAEDLVEKLRKFRFRKETHNAAIIMKIDKDERLVVLDEELEGVSPDELKDELPER 70 Query: 65 QPRFVVYSYKYVHDDGRVSYPLCFIFSSPVGCKPEQQMMYAGSKNRLVQTAELTKVFEIR 124 QPRF+VYSYKY HDDGRVSYPLCFIFSSPVGCKPEQQMMYAGSKN+LVQTAELTKVFEIR Sbjct: 71 QPRFIVYSYKYQHDDGRVSYPLCFIFSSPVGCKPEQQMMYAGSKNKLVQTAELTKVFEIR 130 Query: 125 TTDDLTEAWLQEKLS 139 T+DLTE WL+EKL Sbjct: 131 NTEDLTEEWLREKLG 145 >5YNR-A nrPDB Length = 140 Score = 115 bits (287), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 55/137 (40%), Positives = 84/137 (61%) Query: 1 MSDSLVVCEVDPELTEKLRKFRFRKETDNAAIIMKVDKDRQMVVLEEEFQNISPEELKME 60 M+ SL +C + + E L+KFRF K T A+I+K+D++ + E+ + S EE K E Sbjct: 3 MTSSLTICSIPDGVKEDLKKFRFSKSTTMNALILKIDRESHELQSEQLLNDCSIEEFKEE 62 Query: 61 LPERQPRFVVYSYKYVHDDGRVSYPLCFIFSSPVGCKPEQQMMYAGSKNRLVQTAELTKV 120 LP +QPRF++ S+ H D R+SYP+ I+ P G PE QM+YAGS+N +V ++K Sbjct: 63 LPSQQPRFILLSWCKKHSDERISYPMLLIYYCPNGSSPELQMLYAGSRNFIVNECHVSKN 122 Query: 121 FEIRTTDDLTEAWLQEK 137 EIR D++ + L+ K Sbjct: 123 TEIRDIDEIDDELLESK 139 >5IVU-A nrPDB Length = 141 Score = 42.7 bits (99), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 29/98 (29%), Positives = 52/98 (53%), Gaps = 4/98 (4%) Query: 32 IIMKVDKDRQMVVLEEEFQNISPEELKMELPERQPRFVVYSYKYVHDDGRVS-YPLCFIF 90 II ++K+ + +E+ ++ + +LPE + R+ VY +Y ++G L F+ Sbjct: 29 IIFHLNKENTEIAVEKSSDSVDYDNFLADLPEDECRWAVYDLEYEKEEGAGKRNKLTFVS 88 Query: 91 SSPVGCKPEQQMMYAGSKNRLVQTAELTKV-FEIRTTD 127 +P K +Q+M YA SK+ L + LT + EI+ TD Sbjct: 89 WAPDSAKMKQKMAYASSKDILRRA--LTGIAVEIQGTD 124 >1F7S-A nrPDB Length = 139 Score = 42.0 bits (97), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 31/112 (27%), Positives = 57/112 (50%), Gaps = 2/112 (1%) Query: 17 KLRKFRFRKETDNAAIIMKVDKDRQMVVLEEEFQNISP-EELKMELPERQPRFVVYSYKY 75 KLR + + + I+ K+++ ++ VV+E+ Q I EE LP + R+ +Y + + Sbjct: 15 KLRFLELKAKRTHRFIVYKIEEKQKQVVVEKVGQPIQTYEEFAACLPADECRYAIYDFDF 74 Query: 76 VHDDGRVSYPLCFIFSSPVGCKPEQQMMYAGSKNRLVQTAELTKVFEIRTTD 127 V + + FI P K +M+YA SK+R + + +V E++ TD Sbjct: 75 VTAENCQKSKIFFIAWCPDIAKVRSKMIYASSKDRFKRELDGIQV-ELQATD 125 >2W0I-A nrPDB Length = 135 Score = 39.7 bits (91), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 33/118 (27%), Positives = 61/118 (51%), Gaps = 17/118 (14%) Query: 32 IIMKVDKDRQMVVLEEEFQNISPEELKMELPERQPR----FVVYSYKYVHDDGRVSYPLC 87 I MK+D +R+ + E + P ++ +LP R PR + + YK+ H+ G + Sbjct: 23 IQMKLDLERETI----ELVHTEPTDVA-QLPSRVPRDAARYHFFLYKHTHE-GDPLESVV 76 Query: 88 FIFSSP-VGCKPEQQMMYAGSKNRLVQTA------ELTKVFEIRTTDDLTEAWLQEKL 138 FI+S P C +++M+Y+ K+RL+ + E+ K EI +LT +L +++ Sbjct: 77 FIYSMPGYKCSIKERMLYSSCKSRLLDSVEQDFHLEIAKKIEIGDGAELTAEFLDDEV 134 >1CNU-A nrPDB Length = 137 Score = 39.7 bits (91), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 26/97 (26%), Positives = 51/97 (52%), Gaps = 3/97 (3%) Query: 32 IIMKVDKDRQMVVLEE-EFQNISPEELKMELPERQPRFVVYSYKYVHDDGRVSYPLCFIF 90 + K++ VV+E N + E+ K +LPER R+ ++ Y++ D G+ + + FI Sbjct: 25 VTFKMNASNTEVVVEHVGGPNATYEDFKSQLPERDCRYAIFDYEFQVDGGQRN-KITFIL 83 Query: 91 SSPVGCKPEQQMMYAGSKNRLVQTAELTKVFEIRTTD 127 +P + +MMY +K+ + + +V E++ TD Sbjct: 84 WAPDSAPIKSKMMYTSTKDSIKKKLVGIQV-EVQATD 119 >2XFA-A nrPDB Length = 148 Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust. Identities = 32/117 (27%), Positives = 60/117 (51%), Gaps = 9/117 (7%) Query: 22 RFRKETDNAAIIMKVDKDRQMVV--LEEEFQNISPEELKM----ELPERQPRFVVYSYKY 75 R + + N II K++ ++VV LE + + S + + M L + R+++ Sbjct: 22 RLKVKHLNKYIIYKIENLEKIVVDVLEHDMELTSLDNIIMRIKNNLKNTECRYIIADMPI 81 Query: 76 VHDDGRVSYPLCFIFSSPVGCKPEQQMMYAGSKNRLVQTAELTKVFE-IRTTDDLTE 131 +G + + FIF SP KP+++M+YA SK LV+ ++ +F+ + T D+ E Sbjct: 82 PTPEGVLRDRIYFIFWSPGLSKPKEKMLYAASKESLVR--KINGIFKSLEITCDINE 136 >5BJS-A nrPDB Length = 605 Score = 31.6 bits (70), Expect = 0.12, Method: Composition-based stats. Identities = 31/90 (34%), Positives = 38/90 (42%), Gaps = 17/90 (18%) Query: 41 QMVVLEEEFQNISP--EELKMELPERQPRFVVYS-YKYVHDDGRVSYPLCFIFS------ 91 Q LE FQ P + + ELP + F+ YKY+ DDG VS L F Sbjct: 29 QFEKLEVLFQGPMPASDSAEWELPRLRTSFIFQDDYKYLGDDGSVSQDLAEFFDVKFYPY 88 Query: 92 SPVGCKPEQQMMYAGSKN-----RLVQTAE 116 SP G P + A SK RL QT + Sbjct: 89 SPPGAPP---VFAATSKKHAVICRLTQTTD 115 >5L6W-C nrPDB Length = 167 Score = 28.9 bits (63), Expect = 0.79, Method: Compositional matrix adjust. Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 1/51 (1%) Query: 61 LPERQPRFVVYSYKYVHDDGRVSYPLCFIFSSPVGCKPEQQMMYAGSKNRL 111 LP++ R+ +Y Y + + L FIF +P + +M+YA SK+ + Sbjct: 76 LPDKDCRYALYDATYETKESK-KEDLVFIFWAPESAPLKSKMIYASSKDAI 125 >1QPV-A nrPDB Length = 143 Score = 28.9 bits (63), Expect = 0.85, Method: Compositional matrix adjust. Identities = 20/82 (24%), Positives = 41/82 (50%), Gaps = 3/82 (3%) Query: 32 IIMKVDKDRQMVVLEEEFQNISPEELKMELPERQPRFVVYSYKY--VHDDGRVSYPLCFI 89 I+ ++ + +V++E + S + +LPE + +Y ++Y ++G+ S + F Sbjct: 28 ILFGLNDAKTEIVVKETSTDPSYDAFLEKLPENDCLYAIYDFEYEINGNEGKRS-KIVFF 86 Query: 90 FSSPVGCKPEQQMMYAGSKNRL 111 SP +M+YA SK+ L Sbjct: 87 TWSPDTAPVRSKMVYASSKDAL 108 >5YU8-H nrPDB Length = 166 Score = 28.5 bits (62), Expect = 1.1, Method: Compositional matrix adjust. Identities = 21/81 (25%), Positives = 39/81 (48%), Gaps = 3/81 (3%) Query: 61 LPERQPRFVVYSYKYVHDDGRVSYPLCFIFSSPVGCKPEQQMMYAGSKNRLVQT-AELTK 119 LP R+ +Y Y + + L FIF +P + +M+YA SK+ + + + Sbjct: 75 LPLNDCRYALYDATYETKESK-KEDLVFIFWAPESAPLKSKMIYASSKDAIKKKFTGIKH 133 Query: 120 VFEIRTTDDLTE-AWLQEKLS 139 +++ DD+ + + L EKL Sbjct: 134 EWQVNGLDDIKDRSTLGEKLG 154 >5ICU-A nrPDB Length = 102 Score = 28.5 bits (62), Expect = 1.2, Method: Compositional matrix adjust. Identities = 19/69 (27%), Positives = 32/69 (46%), Gaps = 1/69 (1%) Query: 15 TEKLRKFRFRKETDNA-AIIMKVDKDRQMVVLEEEFQNISPEELKMELPERQPRFVVYSY 73 + KL K RF + A + I +D ++VV + Q P EL ++ PE V + Sbjct: 18 SPKLVKLRFGGGVEPAYSSISILDSTGKLVVEGAKGQADKPRELTLDAPELAVGSYVVKF 77 Query: 74 KYVHDDGRV 82 + + DG + Sbjct: 78 RVLSSDGHI 86 >3NEM-A nrPDB Length = 438 Score = 27.3 bits (59), Expect = 2.5, Method: Compositional matrix adjust. Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 10/64 (15%) Query: 70 VYSYKYVHDDGRVSYPLCFIFSSPVGCKPEQQMMYAGSKNRLVQTAELTKVFEIRTTDDL 129 ++ KY +D F+ SP K Q+M A +R+ + A + + E TT L Sbjct: 175 LFPMKYFEED-------AFLAQSPQLYK---QIMMASGLDRVYEIAPIFRAEEHNTTRHL 224 Query: 130 TEAW 133 EAW Sbjct: 225 NEAW 228 >3JB9-R nrPDB Length = 674 Score = 26.6 bits (57), Expect = 3.5, Method: Compositional matrix adjust. Identities = 13/27 (48%), Positives = 17/27 (62%) Query: 10 VDPELTEKLRKFRFRKETDNAAIIMKV 36 V PE+T LR RF +E NAA + +V Sbjct: 200 VHPEVTNWLRWARFEEECGNAANVRQV 226 >1ND4-A nrPDB Length = 264 Score = 26.6 bits (57), Expect = 3.6, Method: Compositional matrix adjust. Identities = 18/61 (29%), Positives = 26/61 (42%), Gaps = 10/61 (16%) Query: 6 VVCEVDPELTEKLRKFRFRKETDNAAIIMKVDKDRQMVVLEEEFQNISPEELKMELPERQ 65 C D + ++ + R R E VD+D L+EE Q ++P EL L R Sbjct: 129 ATCPFDHQAKHRIERARTRMEAG------LVDQDD----LDEEHQGLAPAELFARLKARM 178 Query: 66 P 66 P Sbjct: 179 P 179 >5ENQ-A nrPDB Length = 609 Score = 25.4 bits (54), Expect = 8.0, Method: Composition-based stats. Identities = 12/39 (30%), Positives = 19/39 (48%) Query: 102 MMYAGSKNRLVQTAELTKVFEIRTTDDLTEAWLQEKLSF 140 +MY S + T ++T FE T D+ + +Q KL Sbjct: 37 LMYMSSNSDSTGTVQITLTFESGTDADIAQVQVQNKLQL 75 >3M4P-A nrPDB Length = 456 Score = 25.4 bits (54), Expect = 9.9, Method: Compositional matrix adjust. Identities = 18/66 (27%), Positives = 34/66 (51%), Gaps = 5/66 (7%) Query: 39 DRQMVVLEEEFQNISPEELKMELPERQPRFVVYS--YKYVHDDGRVSYPLCFIFSSPVGC 96 D M V ++ + ++P ++LP R + + Y+ KY +D G ++ F + + Sbjct: 273 DNVMAVHGDKIRKMNPH---LKLPTRPFKRMTYADAIKYCNDHGILNKDKPFEYGEDISE 329 Query: 97 KPEQQM 102 KPE+QM Sbjct: 330 KPERQM 335 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 4JD2-H nrPDB 198 8e-52 3L50-A nrPDB 187 2e-48 1V6F-A nrPDB 183 2e-47 5YNR-A nrPDB 164 2e-41 1F7S-A nrPDB 125 9e-30 1CNU-A nrPDB 114 1e-26 5IVU-A nrPDB 112 8e-26 2XFA-A nrPDB 107 3e-24 2W0I-A nrPDB 89 5e-19 Sequences not found previously or not previously below threshold: 2I2Q-A nrPDB 92 1e-19 1QPV-A nrPDB 82 7e-17 2D8B-A nrPDB 77 3e-15 2L72-A nrPDB 77 4e-15 2MOT-A nrPDB 76 4e-15 1AK7-A nrPDB 74 2e-14 3DAW-B nrPDB 74 2e-14 2HD7-A nrPDB 74 3e-14 2LJ8-A nrPDB 72 1e-13 5L6W-C nrPDB 70 3e-13 5YU8-H nrPDB 68 1e-12 2LXX-A nrPDB 68 1e-12 2MV2-A nrPDB 67 3e-12 2KVK-A nrPDB 62 1e-10 2MP4-A nrPDB 59 7e-10 1M4J-A nrPDB 53 5e-08 2VAC-A nrPDB 47 3e-06 3Q2B-A nrPDB 37 0.002 1HQZ-1 nrPDB 27 2.6 5A9Q-7 nrPDB 27 2.7 2Z4U-A nrPDB 26 6.3 >4JD2-H nrPDB Length = 142 Score = 198 bits (503), Expect = 8e-52, Method: Composition-based stats. Identities = 133/142 (93%), Positives = 138/142 (97%) Query: 1 MSDSLVVCEVDPELTEKLRKFRFRKETDNAAIIMKVDKDRQMVVLEEEFQNISPEELKME 60 MSDSLVVCEVDPEL E LRKFRFRKET+NAAIIMKVDKDRQMVVLE+E QNISPEELK+E Sbjct: 1 MSDSLVVCEVDPELKETLRKFRFRKETNNAAIIMKVDKDRQMVVLEDELQNISPEELKLE 60 Query: 61 LPERQPRFVVYSYKYVHDDGRVSYPLCFIFSSPVGCKPEQQMMYAGSKNRLVQTAELTKV 120 LPERQPRFVVYSYKYVHDDGRVSYPLCFIFSSPVGCKPEQQMMYAGSKNRLVQTAELTKV Sbjct: 61 LPERQPRFVVYSYKYVHDDGRVSYPLCFIFSSPVGCKPEQQMMYAGSKNRLVQTAELTKV 120 Query: 121 FEIRTTDDLTEAWLQEKLSFFR 142 FEIRTTDDLTE WL+EKL+FFR Sbjct: 121 FEIRTTDDLTETWLKEKLAFFR 142 >3L50-A nrPDB Length = 136 Score = 187 bits (474), Expect = 2e-48, Method: Composition-based stats. Identities = 134/135 (99%), Positives = 135/135 (100%) Query: 6 VVCEVDPELTEKLRKFRFRKETDNAAIIMKVDKDRQMVVLEEEFQNISPEELKMELPERQ 65 +VCEVDPELTEKLRKFRFRKETDNAAIIMKVDKDRQMVVLEEEFQNISPEELKMELPERQ Sbjct: 2 MVCEVDPELTEKLRKFRFRKETDNAAIIMKVDKDRQMVVLEEEFQNISPEELKMELPERQ 61 Query: 66 PRFVVYSYKYVHDDGRVSYPLCFIFSSPVGCKPEQQMMYAGSKNRLVQTAELTKVFEIRT 125 PRFVVYSYKYVHDDGRVSYPLCFIFSSPVGCKPEQQMMYAGSKNRLVQTAELTKVFEIRT Sbjct: 62 PRFVVYSYKYVHDDGRVSYPLCFIFSSPVGCKPEQQMMYAGSKNRLVQTAELTKVFEIRT 121 Query: 126 TDDLTEAWLQEKLSF 140 TDDLTEAWLQEKLSF Sbjct: 122 TDDLTEAWLQEKLSF 136 >1V6F-A nrPDB Length = 151 Score = 183 bits (465), Expect = 2e-47, Method: Composition-based stats. Identities = 110/135 (81%), Positives = 123/135 (91%) Query: 5 LVVCEVDPELTEKLRKFRFRKETDNAAIIMKVDKDRQMVVLEEEFQNISPEELKMELPER 64 LVVC+V +L EKLRKFRFRKET NAAIIMK+DKD ++VVL+EE + +SP+ELK ELPER Sbjct: 11 LVVCDVAEDLVEKLRKFRFRKETHNAAIIMKIDKDERLVVLDEELEGVSPDELKDELPER 70 Query: 65 QPRFVVYSYKYVHDDGRVSYPLCFIFSSPVGCKPEQQMMYAGSKNRLVQTAELTKVFEIR 124 QPRF+VYSYKY HDDGRVSYPLCFIFSSPVGCKPEQQMMYAGSKN+LVQTAELTKVFEIR Sbjct: 71 QPRFIVYSYKYQHDDGRVSYPLCFIFSSPVGCKPEQQMMYAGSKNKLVQTAELTKVFEIR 130 Query: 125 TTDDLTEAWLQEKLS 139 T+DLTE WL+EKL Sbjct: 131 NTEDLTEEWLREKLG 145 >5YNR-A nrPDB Length = 140 Score = 164 bits (414), Expect = 2e-41, Method: Composition-based stats. Identities = 55/137 (40%), Positives = 84/137 (61%) Query: 1 MSDSLVVCEVDPELTEKLRKFRFRKETDNAAIIMKVDKDRQMVVLEEEFQNISPEELKME 60 M+ SL +C + + E L+KFRF K T A+I+K+D++ + E+ + S EE K E Sbjct: 3 MTSSLTICSIPDGVKEDLKKFRFSKSTTMNALILKIDRESHELQSEQLLNDCSIEEFKEE 62 Query: 61 LPERQPRFVVYSYKYVHDDGRVSYPLCFIFSSPVGCKPEQQMMYAGSKNRLVQTAELTKV 120 LP +QPRF++ S+ H D R+SYP+ I+ P G PE QM+YAGS+N +V ++K Sbjct: 63 LPSQQPRFILLSWCKKHSDERISYPMLLIYYCPNGSSPELQMLYAGSRNFIVNECHVSKN 122 Query: 121 FEIRTTDDLTEAWLQEK 137 EIR D++ + L+ K Sbjct: 123 TEIRDIDEIDDELLESK 139 >1F7S-A nrPDB Length = 139 Score = 125 bits (313), Expect = 9e-30, Method: Composition-based stats. Identities = 31/112 (27%), Positives = 57/112 (50%), Gaps = 2/112 (1%) Query: 17 KLRKFRFRKETDNAAIIMKVDKDRQMVVLEEEFQNIS-PEELKMELPERQPRFVVYSYKY 75 KLR + + + I+ K+++ ++ VV+E+ Q I EE LP + R+ +Y + + Sbjct: 15 KLRFLELKAKRTHRFIVYKIEEKQKQVVVEKVGQPIQTYEEFAACLPADECRYAIYDFDF 74 Query: 76 VHDDGRVSYPLCFIFSSPVGCKPEQQMMYAGSKNRLVQTAELTKVFEIRTTD 127 V + + FI P K +M+YA SK+R + + +V E++ TD Sbjct: 75 VTAENCQKSKIFFIAWCPDIAKVRSKMIYASSKDRFKRELDGIQV-ELQATD 125 >1CNU-A nrPDB Length = 137 Score = 114 bits (286), Expect = 1e-26, Method: Composition-based stats. Identities = 28/122 (22%), Positives = 60/122 (49%), Gaps = 5/122 (4%) Query: 19 RKFRFRKETDNAAIIMKVDKDRQMVVLEE-EFQNISPEELKMELPERQPRFVVYSYKYVH 77 + + + + K++ VV+E N + E+ K +LPER R+ ++ Y++ Sbjct: 12 KFNELKLGHQHRYVTFKMNASNTEVVVEHVGGPNATYEDFKSQLPERDCRYAIFDYEFQV 71 Query: 78 DDGRVSYPLCFIFSSPVGCKPEQQMMYAGSKNRLVQTAELTKVFEIRTTD--DLTEAWLQ 135 D G+ + FI +P + +MMY +K+ + + +V E++ TD +++E + Sbjct: 72 DGGQ-RNKITFILWAPDSAPIKSKMMYTSTKDSIKKKLVGIQV-EVQATDAAEISEDAVS 129 Query: 136 EK 137 E+ Sbjct: 130 ER 131 >5IVU-A nrPDB Length = 141 Score = 112 bits (279), Expect = 8e-26, Method: Composition-based stats. Identities = 32/126 (25%), Positives = 60/126 (47%), Gaps = 4/126 (3%) Query: 3 DSLVVCEVDPELTEKLRKFRFRKETDNAAIIMKVDKDRQMVVLEEEFQNISPEELKMELP 62 SL ++ E ++ + K+ II ++K+ + +E+ ++ + +LP Sbjct: 2 TSLSGVTLNDACVETYQQLKLGKK--LKYIIFHLNKENTEIAVEKSSDSVDYDNFLADLP 59 Query: 63 ERQPRFVVYSYKYVHDDGRVS-YPLCFIFSSPVGCKPEQQMMYAGSKNRLVQTAELTKVF 121 E + R+ VY +Y ++G L F+ +P K +Q+M YA SK+ L + V Sbjct: 60 EDECRWAVYDLEYEKEEGAGKRNKLTFVSWAPDSAKMKQKMAYASSKDILRRALTGIAV- 118 Query: 122 EIRTTD 127 EI+ TD Sbjct: 119 EIQGTD 124 >2XFA-A nrPDB Length = 148 Score = 107 bits (266), Expect = 3e-24, Method: Composition-based stats. Identities = 32/117 (27%), Positives = 60/117 (51%), Gaps = 9/117 (7%) Query: 22 RFRKETDNAAIIMKVDKDRQMVV--LEEEFQNISPEELKM----ELPERQPRFVVYSYKY 75 R + + N II K++ ++VV LE + + S + + M L + R+++ Sbjct: 22 RLKVKHLNKYIIYKIENLEKIVVDVLEHDMELTSLDNIIMRIKNNLKNTECRYIIADMPI 81 Query: 76 VHDDGRVSYPLCFIFSSPVGCKPEQQMMYAGSKNRLVQTAELTKVFE-IRTTDDLTE 131 +G + + FIF SP KP+++M+YA SK LV+ ++ +F+ + T D+ E Sbjct: 82 PTPEGVLRDRIYFIFWSPGLSKPKEKMLYAASKESLVR--KINGIFKSLEITCDINE 136 >2I2Q-A nrPDB Length = 137 Score = 91.7 bits (226), Expect = 1e-19, Method: Composition-based stats. Identities = 27/119 (22%), Positives = 59/119 (49%), Gaps = 4/119 (3%) Query: 9 EVDPELTEKLRKFRFRKETDNAAIIMKVDKDRQMVVLEEEFQNISPEELKMELPERQPRF 68 +V PE E ++ + K ++ K++ + +V+E++ + + +LPE+ R+ Sbjct: 7 KVSPECLEAFQELKLGKS--LRYVVFKMNDTKTEIVVEKKSTDKDFDTFLGDLPEKDCRY 64 Query: 69 VVYSYKYVHDDGRVSYPLCFIFSSPVGCKPEQQMMYAGSKNRLVQTAELTKVFEIRTTD 127 +Y +++ +G V + FI SP + +M+Y+ SK+ L + +I+ TD Sbjct: 65 AIYDFEFNLGEG-VRNKIIFISWSPDVAPIKSKMVYSSSKDTLRRAFTGIG-TDIQATD 121 >2W0I-A nrPDB Length = 135 Score = 89.4 bits (220), Expect = 5e-19, Method: Composition-based stats. Identities = 36/134 (26%), Positives = 66/134 (49%), Gaps = 17/134 (12%) Query: 16 EKLRKFRFRKETDNAAIIMKVDKDRQMVVLEEEFQNISPEELKMELPERQPR----FVVY 71 E R + K+ I MK+D +R+ + E + P ++ +LP R PR + + Sbjct: 7 EAQRALQQLKQKMVNYIQMKLDLERETI----ELVHTEPTDVA-QLPSRVPRDAARYHFF 61 Query: 72 SYKYVHDDGRVSYPLCFIFSSP-VGCKPEQQMMYAGSKNRLVQT------AELTKVFEIR 124 YK+ H +G + FI+S P C +++M+Y+ K+RL+ + E+ K EI Sbjct: 62 LYKHTH-EGDPLESVVFIYSMPGYKCSIKERMLYSSCKSRLLDSVEQDFHLEIAKKIEIG 120 Query: 125 TTDDLTEAWLQEKL 138 +LT +L +++ Sbjct: 121 DGAELTAEFLDDEV 134 >1QPV-A nrPDB Length = 143 Score = 82.4 bits (202), Expect = 7e-17, Method: Composition-based stats. Identities = 23/119 (19%), Positives = 48/119 (40%), Gaps = 4/119 (3%) Query: 10 VDPELTEKLRKFRFRKETDNAAIIMKVDKDRQMVVLEEEFQNISPEELKMELPERQPRFV 69 V E + K+ I+ ++ + +V++E + S + +LPE + Sbjct: 8 VADESLTAFNDLKLGKKY--KFILFGLNDAKTEIVVKETSTDPSYDAFLEKLPENDCLYA 65 Query: 70 VYSYKYVHDDGRVS-YPLCFIFSSPVGCKPEQQMMYAGSKNRLVQTAELTKVFEIRTTD 127 +Y ++Y + + F SP +M+YA SK+ L + +++ TD Sbjct: 66 IYDFEYEINGNEGKRSKIVFFTWSPDTAPVRSKMVYASSKDALRRALNGVS-TDVQGTD 123 >2D8B-A nrPDB Length = 166 Score = 77.0 bits (188), Expect = 3e-15, Method: Composition-based stats. Identities = 27/124 (21%), Positives = 61/124 (49%), Gaps = 10/124 (8%) Query: 22 RFRKETDNAAIIMKVDKDRQMVVLEEEFQNISPEELKMELPERQPRFVVYSYKYVHDDGR 81 + K+ N + +++D + ++L +N +L +P+ R+ + YK+ H +G Sbjct: 39 KLSKKQLN-YVQLEIDIKNETIILANT-ENTELRDLPKRIPKDSARYHFFLYKHSH-EGD 95 Query: 82 VSYPLCFIFSSP-VGCKPEQQMMYAGSKNRLVQ------TAELTKVFEIRTTDDLTEAWL 134 + FI+S P C ++M+Y+ K+ L++ ++ + EI D+LT +L Sbjct: 96 YLESVVFIYSMPGYTCSIRERMLYSSCKSPLLEIVERQLQMDVIRKIEIDNGDELTADFL 155 Query: 135 QEKL 138 +++ Sbjct: 156 YDEV 159 >2L72-A nrPDB Length = 139 Score = 76.6 bits (187), Expect = 4e-15, Method: Composition-based stats. Identities = 20/107 (18%), Positives = 41/107 (38%), Gaps = 12/107 (11%) Query: 19 RKFRFRKETDNAAIIMKVDKDRQMVVLEEEFQNISPEELKMELPERQPRFVVYSYKYVHD 78 R + I+ K+ + +V+E++ + + +E + LP RF VY Sbjct: 35 RFNELKIRKTVKWIVFKI--ENTKIVVEKDGKG-NADEFRGALPANDCRFGVYD------ 85 Query: 79 DGRVSYPLCFIFSSPVGCKPEQQMMYAGSKNRLVQTAELTKVFEIRT 125 + F+ P + +M YA SK+ L++ + + Sbjct: 86 ---CGNKIQFVLWCPDNAPVKPRMTYASSKDALLKKLDGATAVALEA 129 >2MOT-A nrPDB Length = 118 Score = 76.3 bits (186), Expect = 4e-15, Method: Composition-based stats. Identities = 20/107 (18%), Positives = 41/107 (38%), Gaps = 12/107 (11%) Query: 19 RKFRFRKETDNAAIIMKVDKDRQMVVLEEEFQNISPEELKMELPERQPRFVVYSYKYVHD 78 R + I+ K+ + +V+E++ + + +E + LP RF VY Sbjct: 14 RFNELKIRKTVKWIVFKI--ENTKIVVEKDGKG-NADEFRGALPANDCRFGVYD------ 64 Query: 79 DGRVSYPLCFIFSSPVGCKPEQQMMYAGSKNRLVQTAELTKVFEIRT 125 + F+ P + +M YA SK+ L++ + + Sbjct: 65 ---CGNKIQFVLWCPDNAPVKPRMTYASSKDALLKKLDGATAVALEA 108 >1AK7-A nrPDB Length = 174 Score = 74.0 bits (180), Expect = 2e-14, Method: Composition-based stats. Identities = 30/134 (22%), Positives = 58/134 (43%), Gaps = 5/134 (3%) Query: 8 CEVDPELTEKLRKFRFRKETDNAAIIMKVDKDRQMVVLEEEFQNISP-EELKMELPERQP 66 C E+ ++ + F D II V++ ++++V + P + LPE+ Sbjct: 32 CSTPEEIKKRKKAVIFCLSADKKCII--VEEGKEILVGDVGVTITDPFKHFVGMLPEKDC 89 Query: 67 RFVVYSYKYVHDDGRVSYPLCFIFSSPVGCKPEQQMMYAGSKNRLVQTAELTK-VFEIRT 125 R+ +Y + + R L F +P + +M+YA SK+ + + + K + Sbjct: 90 RYALYDASFETKESR-KEELMFFLWAPELAPLKSKMIYASSKDAIKKKFQGIKHECQANG 148 Query: 126 TDDLTEAWLQEKLS 139 +DL A + EKL Sbjct: 149 PEDLNRACIAEKLG 162 >3DAW-B nrPDB Length = 164 Score = 74.0 bits (180), Expect = 2e-14, Method: Composition-based stats. Identities = 27/124 (21%), Positives = 61/124 (49%), Gaps = 10/124 (8%) Query: 22 RFRKETDNAAIIMKVDKDRQMVVLEEEFQNISPEELKMELPERQPRFVVYSYKYVHDDGR 81 + K+ N + +++D + ++L +N +L +P+ R+ + YK+ H +G Sbjct: 34 KLSKKQLN-YVQLEIDIKNETIILANT-ENTELRDLPKRIPKDSARYHFFLYKHSH-EGD 90 Query: 82 VSYPLCFIFSSP-VGCKPEQQMMYAGSKNRLVQ------TAELTKVFEIRTTDDLTEAWL 134 + FI+S P C ++M+Y+ K+ L++ ++ + EI D+LT +L Sbjct: 91 YLESVVFIYSMPGYTCSIRERMLYSSCKSPLLEIVERQLQMDVIRKIEIDNGDELTADFL 150 Query: 135 QEKL 138 +++ Sbjct: 151 YDEV 154 >2HD7-A nrPDB Length = 142 Score = 73.6 bits (179), Expect = 3e-14, Method: Composition-based stats. Identities = 27/124 (21%), Positives = 61/124 (49%), Gaps = 10/124 (8%) Query: 22 RFRKETDNAAIIMKVDKDRQMVVLEEEFQNISPEELKMELPERQPRFVVYSYKYVHDDGR 81 + K+ N + +++D + ++L +N +L +P+ R+ + YK+ H +G Sbjct: 18 KLSKKQLN-YVQLEIDIKNETIILANT-ENTELRDLPKRIPKDSARYHFFLYKHSH-EGD 74 Query: 82 VSYPLCFIFSSP-VGCKPEQQMMYAGSKNRLVQ------TAELTKVFEIRTTDDLTEAWL 134 + FI+S P C ++M+Y+ K+ L++ ++ + EI D+LT +L Sbjct: 75 YLESVVFIYSMPGYTCSIRERMLYSSCKSPLLEIVERQLQMDVIRKIEIDNGDELTADFL 134 Query: 135 QEKL 138 +++ Sbjct: 135 YDEV 138 >2LJ8-A nrPDB Length = 144 Score = 71.6 bits (174), Expect = 1e-13, Method: Composition-based stats. Identities = 23/130 (17%), Positives = 50/130 (38%), Gaps = 4/130 (3%) Query: 9 EVDPELTEKLRKFRFRKETDNAAIIMKVDKDRQMVVLEEEFQNISPEELKMELPERQPRF 68 V E L R +K +IM + + + V + + ++ + + P + Sbjct: 15 SVADECVTALNDLRHKKS---RYVIMHIVDQKSIAVKTIGERGANFDQFIEAIDKNVPCY 71 Query: 69 VVYSYKYVHDDGRVSYPLCFIFSSPVGCKPEQQMMYAGSKNRLVQTAELTKVFEIRTTDD 128 + ++Y +DG L I +P P +M+Y+ S++ LV + + + Sbjct: 72 AAFDFEYTTNDG-PRDKLILISWNPDSGAPRTKMLYSSSRDALVPLTQGFQGIQANDASG 130 Query: 129 LTEAWLQEKL 138 L + K+ Sbjct: 131 LDFEEISRKV 140 >5L6W-C nrPDB Length = 167 Score = 70.1 bits (170), Expect = 3e-13, Method: Composition-based stats. Identities = 23/121 (19%), Positives = 51/121 (42%), Gaps = 7/121 (5%) Query: 9 EVDPELTEKLRKFRFRKETDNAAIIMKVDKDRQMVVLEEEFQNIS--PEELKMELPERQP 66 E+ ++ + F D II+ ++ + +++ + Q + LP++ Sbjct: 25 STPEEVKKRKKAVLFCLSEDKKNIIL---EEGKEILVGDVGQTVDDPYATFVKMLPDKDC 81 Query: 67 RFVVYSYKYVHDDGRVSYPLCFIFSSPVGCKPEQQMMYAGSKNRLVQTAELTKVFEIRTT 126 R+ +Y Y + + L FIF +P + +M+YA SK+ + + K E++ Sbjct: 82 RYALYDATYETKESK-KEDLVFIFWAPESAPLKSKMIYASSKDAIKKKLTGIK-HELQAN 139 Query: 127 D 127 Sbjct: 140 C 140 >5YU8-H nrPDB Length = 166 Score = 68.2 bits (165), Expect = 1e-12, Method: Composition-based stats. Identities = 27/135 (20%), Positives = 57/135 (42%), Gaps = 8/135 (5%) Query: 9 EVDPELTEKLRKFRFRKETDNAAIIMKVDKDRQMVVLEEEFQNIS--PEELKMELPERQP 66 E+ ++ + F D II+ ++ + +++ + + LP Sbjct: 24 STPEEIKKRKKAVLFCLSDDKKQIIV---EEAKQILVGDIGDTVEDPYTAFVKLLPLNDC 80 Query: 67 RFVVYSYKYVHDDGRVSYPLCFIFSSPVGCKPEQQMMYAGSKNRLVQTAELTK-VFEIRT 125 R+ +Y Y + + L FIF +P + +M+YA SK+ + + K +++ Sbjct: 81 RYALYDATYETKESK-KEDLVFIFWAPESAPLKSKMIYASSKDAIKKKFTGIKHEWQVNG 139 Query: 126 TDDLTE-AWLQEKLS 139 DD+ + + L EKL Sbjct: 140 LDDIKDRSTLGEKLG 154 >2LXX-A nrPDB Length = 152 Score = 67.8 bits (164), Expect = 1e-12, Method: Composition-based stats. Identities = 24/129 (18%), Positives = 54/129 (41%), Gaps = 13/129 (10%) Query: 23 FRKETDNAAIIMKVDKDRQMVVLEEEFQ-NISPEELKMELPE-----RQPRFVVYSYKYV 76 + ++ II K+DK+ +V+E+ + N E E+ + ++ R+ + Sbjct: 18 LHNKHQHSYIIFKIDKNDTAIVVEKVGEKNAPYAEFVEEMKKLVEDGKECRYAAVDVEVT 77 Query: 77 H-----DDGRVSYPLCFIFSSPVGCKPEQQMMYAGSKNRLVQTAELTKVFEIRTTD--DL 129 + + F+ P ++M+YA S L + L +F+++ ++ DL Sbjct: 78 VQRQGAEGTSTLNKVIFVQYCPDNAPVRRRMLYASSVRALKASLGLESLFQVQASEMSDL 137 Query: 130 TEAWLQEKL 138 E ++ L Sbjct: 138 DEKSVKSDL 146 >2MV2-A nrPDB Length = 148 Score = 67.0 bits (162), Expect = 3e-12, Method: Composition-based stats. Identities = 25/148 (16%), Positives = 66/148 (44%), Gaps = 16/148 (10%) Query: 1 MSDSLVVCEVDPELTEKLRKFRFRKETDNAAIIMKVDKDRQMVVLEEEFQNISPEELKME 60 M+ + V +V E +K+ + +I + ++Q+ V +N ++ + Sbjct: 1 MASGVTVSDVCKTTYE-----EIKKDKKHRYVIFYIRDEKQIDVETVADRNAEYDQFLED 55 Query: 61 LPE---RQPRFVVYSYKYVH-----DDGRVSYPLCFIFSSPVGCKPEQQMMYAGSKNRLV 112 + + + R+ ++ ++Y+H + L + P K +++M+Y+ S + L Sbjct: 56 IQKCGPGECRYGLFDFEYMHQCQGTSESSKKQKLFLMSWCPDTAKVKKKMLYSSSFDALK 115 Query: 113 QTAELTKVFEIRTTD--DLTEAWLQEKL 138 ++ + + I+ TD + + ++EKL Sbjct: 116 KSLVGVQKY-IQATDLSEASREAVEEKL 142 >2KVK-A nrPDB Length = 144 Score = 61.6 bits (148), Expect = 1e-10, Method: Composition-based stats. Identities = 25/135 (18%), Positives = 58/135 (42%), Gaps = 5/135 (3%) Query: 9 EVDPELTEKLRKFRFRKETDNAAIIMKVDKDRQMVVLEEEFQ-NISPEELKMELPERQPR 67 ++ + + R +K ++M + D + + + E + +++ +LK + +P Sbjct: 7 TLEESVRGAIDDLRMKKS---RYVMMCIGADGKKIEVTEVGERSVNYTDLKEKFSTEKPC 63 Query: 68 FVVYSYKYVHDDGRVSYPLCFIFSSPVGCKPEQQMMYAGSKNRLVQTAELTKVFEIRTTD 127 +V + ++Y +D G L I P +P ++MMY+ S++ L +E + Sbjct: 64 YVAFDFEY-NDAGSKREKLILIQWIPDTARPREKMMYSASRDALSSVSEGYLPIQANDES 122 Query: 128 DLTEAWLQEKLSFFR 142 L + K+ R Sbjct: 123 GLDAEEIIRKVRLHR 137 >2MP4-A nrPDB Length = 165 Score = 58.9 bits (141), Expect = 7e-10, Method: Composition-based stats. Identities = 22/141 (15%), Positives = 55/141 (39%), Gaps = 23/141 (16%) Query: 10 VDPELTEKLRKFRFRKETDNAAIIMKVDKDRQMVVLE-------------EEFQNISPEE 56 VDP++ +K + II K+D+++ +V ++ + ++ Sbjct: 7 VDPDVQTSFQKLS-EGRKEYRYIIFKIDENKVIVEAAVTQDQLGITGDDYDDSSKAAFDK 65 Query: 57 LKMELPER-----QPRFVVYSYKYVHD----DGRVSYPLCFIFSSPVGCKPEQQMMYAGS 107 ++ R R+ V+ +K+ + F+ P G +++M+YA S Sbjct: 66 FVEDVKSRTDNLTDCRYAVFDFKFTCSRVGAGTSKMDKIIFLQICPDGASIKKKMVYASS 125 Query: 108 KNRLVQTAELTKVFEIRTTDD 128 + + K+ + + +D+ Sbjct: 126 AAAIKTSLGTGKILQFQVSDE 146 >1M4J-A nrPDB Length = 142 Score = 52.8 bits (125), Expect = 5e-08, Method: Composition-based stats. Identities = 20/106 (18%), Positives = 44/106 (41%), Gaps = 10/106 (9%) Query: 15 TEKLRKFRFRKETDNAAIIMKVDKDRQMVVLEEEFQNIS-----PEELKMELPER-QPRF 68 +E +++ F + + ++K+ + + +V+ + + L E QP + Sbjct: 10 SEDVKEI-FARARNGKYRLLKISIENEQLVVGSCSPPSDSWEQDYDSFVLPLLEDKQPCY 68 Query: 69 VVYSYKYVHDDGRVSYPLCFIFSSPVGCKPEQQMMYAGSKNRLVQT 114 V++ + G Y FI SP Q+M+YA ++ L + Sbjct: 69 VLFRLDSQNAQG---YEWIFIAWSPDHSHVRQKMLYAATRATLKKE 111 >2VAC-A nrPDB Length = 134 Score = 47.0 bits (110), Expect = 3e-06, Method: Composition-based stats. Identities = 22/106 (20%), Positives = 48/106 (45%), Gaps = 10/106 (9%) Query: 15 TEKLRKFRFRKETDNAAIIMKVDKDRQMVVLEEEFQNI---SPEELKMELP---ERQPRF 68 TE+L++F F K + ++KV + + +VL + + + + LP +QP + Sbjct: 7 TEELKEF-FAKARAGSVRLIKVVIEDEQLVLGASQEPVGRWDQDYDRAVLPLLDAQQPCY 65 Query: 69 VVYSYKYVHDDGRVSYPLCFIFSSPVGCKPEQQMMYAGSKNRLVQT 114 ++Y + G + F+ SP +M+YA ++ + + Sbjct: 66 LLYRLDSQNAQG---FEWLFLAWSPDNSPVRLKMLYAATRATVKKE 108 >3Q2B-A nrPDB Length = 124 Score = 37.4 bits (85), Expect = 0.002, Method: Composition-based stats. Identities = 16/102 (15%), Positives = 33/102 (32%), Gaps = 14/102 (13%) Query: 23 FRKETDNAAIIMKVDKDRQMVVLEEEFQNISPEELKMELP---ERQPRFVVYSYKYVHDD 79 + II + +++ + + + EL + E Q +VV+ Sbjct: 20 MKIRKTCGWIIFVI--QNCEIIIHSKGASTTLTELVQSIDKNNEIQCAYVVFD------- 70 Query: 80 GRVSYPLCFIFSSPVGCKPEQQMMYAGSKNRLVQTAELTKVF 121 + F + +M YA SK +++ E V Sbjct: 71 --AVSKIHFFMYARESSNSRDRMTYASSKQAILKKIEGVNVL 110 >1HQZ-1 nrPDB Length = 141 Score = 27.3 bits (59), Expect = 2.6, Method: Composition-based stats. Identities = 17/96 (17%), Positives = 31/96 (32%), Gaps = 5/96 (5%) Query: 46 EEEFQNISPEELKMELPERQPRFVVYSYKYVHDDGRVSYPLCFIFSSPVGCKPEQQMMYA 105 E E S + E + ++ + V G + I P + + +A Sbjct: 44 EPESTGSSFHDFLQLFDETKVQYGLA---RVSPPGSDVEKIIIIGWCPDSAPLKTRASFA 100 Query: 106 GSKNRLVQTAELTKVFEI--RTTDDLTEAWLQEKLS 139 + + ++ R DDL E L K+S Sbjct: 101 ANFAAVANNLFKGYHVQVTARDEDDLDENELLMKIS 136 >5A9Q-7 nrPDB Length = 360 Score = 27.0 bits (58), Expect = 2.7, Method: Composition-based stats. Identities = 9/50 (18%), Positives = 17/50 (34%), Gaps = 1/50 (2%) Query: 73 YKYVHDDGRVSYPLCFIFSSPVGCKPEQQMMYAGSKNRLVQTAELTKVFE 122 + H+ C I +P + M+ GS + ++FE Sbjct: 153 WSLQHEISCKLSCSC-ISWNPSSSRAHSPMIAVGSDDSSPNAMAKVQIFE 201 >2Z4U-A nrPDB Length = 261 Score = 25.8 bits (55), Expect = 6.3, Method: Composition-based stats. Identities = 11/103 (10%), Positives = 34/103 (33%), Gaps = 6/103 (5%) Query: 28 DNAAIIMKVDKDRQMVVLEEEFQNISPEELKMELPERQPRFVVYSYKYVHDDGRVSYPLC 87 +++K+ + +N +L + R+ +++ + V L Sbjct: 46 TPKYVLVKLQDASSKTITLMLRRNNLYVMGYSDLYNGKCRYHIFNDISSTESTDVENTL- 104 Query: 88 FIFSSPVGCKPEQQMM-YAGSKNRLVQTAELTKVFEIRTTDDL 129 P E++ + Y + L A ++ +++ + Sbjct: 105 ----CPNSNSREKKAINYNSQYSTLQNKAGVSSRSQVQLGIQI 143 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.314 0.133 0.330 Lambda K H 0.267 0.0408 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 4,664,867 Number of Sequences: 36641 Number of extensions: 154703 Number of successful extensions: 521 Number of sequences better than 10.0: 34 Number of HSP's better than 10.0 without gapping: 44 Number of HSP's successfully gapped in prelim test: 17 Number of HSP's that attempted gapping in prelim test: 448 Number of HSP's gapped (non-prelim): 61 length of query: 142 length of database: 10,336,785 effective HSP length: 87 effective length of query: 55 effective length of database: 7,149,018 effective search space: 393195990 effective search space used: 393195990 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.5 bits) S2: 54 (25.4 bits)