BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= O55028 (412 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 4DZY-A nrPDB 836 0.0 3CRK-A nrPDB 167 1e-41 2Q8F-A nrPDB 162 3e-40 2E0A-A nrPDB 159 3e-39 1Y8N-A nrPDB 153 1e-37 4U7O-A nrPDB 41 0.001 3SL2-A nrPDB 37 0.017 4I5S-A nrPDB 33 0.29 3D36-A nrPDB 31 0.97 5L3Q-B nrPDB 30 1.5 3L72-A nrPDB 30 1.8 1LVB-A nrPDB 29 4.2 1XRE-A nrPDB 28 5.9 5XX1-A nrPDB 28 6.5 6AZR-A nrPDB 28 7.0 2OG6-A nrPDB 28 7.0 2P22-C nrPDB 28 8.7 >4DZY-A nrPDB Length = 418 Score = 836 bits (2159), Expect = 0.0, Method: Compositional matrix adjust. Identities = 406/412 (98%), Positives = 409/412 (99%) Query: 1 MILTSVLGSGPRSWSSLWPLLGSSLSLRARSTSATDTHHVELARERSKTVTSFYNQSAID 60 MILTSVLGSGPRS SSLWPLLGSSLSLR RSTSATDTHHVELARERSKTVTSFYNQSAID Sbjct: 1 MILTSVLGSGPRSGSSLWPLLGSSLSLRVRSTSATDTHHVELARERSKTVTSFYNQSAID 60 Query: 61 VAAEKPSVRLTPTMMLYSGRSQDGSHLLKSGRYLQQELPVRIAHRIKGFRSLPFIIGCNP 120 V AEKPSVRLTPTMMLYSGRSQDGSHLLKSGRYLQQELPVRIAHRIKGFRSLPFIIGCNP Sbjct: 61 VVAEKPSVRLTPTMMLYSGRSQDGSHLLKSGRYLQQELPVRIAHRIKGFRSLPFIIGCNP 120 Query: 121 TILHVHELYIRAFQKLTDFPPIKDQADEAQYCQLVRQLLDDHKDVVTLLAEGLRESRKHI 180 TILHVHELYIRAFQKLTDFPPIKDQADEAQYCQLVRQLLDDHKDVVTLLAEGLRESRKHI Sbjct: 121 TILHVHELYIRAFQKLTDFPPIKDQADEAQYCQLVRQLLDDHKDVVTLLAEGLRESRKHI 180 Query: 181 QDEKLVRYFLDKTLTSRLGIRMLATHHLALHEDKPDFVGIICTRLSPKKIIEKWVDFARR 240 +DEKLVRYFLDKTLTSRLGIRMLATHHLALHEDKPDFVGIICTRLSPKKIIEKWVDFARR Sbjct: 181 EDEKLVRYFLDKTLTSRLGIRMLATHHLALHEDKPDFVGIICTRLSPKKIIEKWVDFARR 240 Query: 241 LCEHKYGNAPRVRINGHVAARFPFIPMPLDYILPELLKNAMRATMESHLDTPYNVPDVVI 300 LCEHKYGNAPRVRINGHVAARFPFIPMPLDYILPELLKNAMRATMESHLDTPYNVPDVVI Sbjct: 241 LCEHKYGNAPRVRINGHVAARFPFIPMPLDYILPELLKNAMRATMESHLDTPYNVPDVVI 300 Query: 301 TIANNDIDLIIRISDRGGGIAHKDLDRVMDYHFTTAEASTQDPRINPLFGHLDMHSGGQS 360 TIANND+DLIIRISDRGGGIAHKDLDRVMDYHFTTAEASTQDPRI+PLFGHLDMHSGGQS Sbjct: 301 TIANNDVDLIIRISDRGGGIAHKDLDRVMDYHFTTAEASTQDPRISPLFGHLDMHSGGQS 360 Query: 361 GPMHGFGFGLPTSRAYAEYLGGSLQLQSLQGIGTDVYLRLRHIDGREESFRI 412 GPMHGFGFGLPTSRAYAEYLGGSLQLQSLQGIGTDVYLRLRHIDGREESFRI Sbjct: 361 GPMHGFGFGLPTSRAYAEYLGGSLQLQSLQGIGTDVYLRLRHIDGREESFRI 412 >3CRK-A nrPDB Length = 407 Score = 167 bits (422), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 111/338 (32%), Positives = 173/338 (51%), Gaps = 37/338 (10%) Query: 90 SGRYLQQELPVRIAHRIKGFRSLPFIIGCNPTILHVHELYIRAFQKLTDFPPIKDQADEA 149 S +L+QELPVR+A+ +K LP + P++ V Y+++ + +F KD D Sbjct: 49 SFTFLRQELPVRLANIMKEINLLPDRVLSTPSVQLVQSWYVQSLLDIMEFLD-KDPEDHR 107 Query: 150 QYCQLVRQLL---DDHKDVVTLLAEGLRESRKHIQDEKL----VRYFLDKTLTSRLGIRM 202 Q L+ + H DVV +A+G+ E + D+ + ++YFLD+ SR+ IRM Sbjct: 108 TLSQFTDALVTIRNRHNDVVPTMAQGVLEYKDTYGDDPVSNQNIQYFLDRFYLSRISIRM 167 Query: 203 LATHHLALHEDK-----PDFVGIICTRLSPKKIIEKWVDFARRLCEHKYGNAPRVRI--- 254 L H + + P +G I S +++ D A+ LC+ Y +P + I Sbjct: 168 LINQHTLIFDGSTNPAHPKHIGSIDPNCSVSDVVKDAYDMAKLLCDKYYMASPDLEIQEV 227 Query: 255 ---NGHVAARFPFIPMPLDYILPELLKNAMRATMESHLDTPYNVPDVVITIANNDIDLII 311 N ++P L ++L EL KNAMRAT+ESH ++ +P + I +A + DL I Sbjct: 228 NATNATQPIHMVYVPSHLYHMLFELFKNAMRATVESH-ESSLTLPPIKIMVALGEEDLSI 286 Query: 312 RISDRGGGIAHKDLDRVMDYHFTTAEASTQDPRINPLFGHLDMHSGGQSGPMHGFGFGLP 371 ++SDRGGG+ + ++R+ Y ++TA P P G P+ GFG+GLP Sbjct: 287 KMSDRGGGVPLRKIERLFSYMYSTA------PTPQP---------GTGGTPLAGFGYGLP 331 Query: 372 TSRAYAEYLGGSLQLQSLQGIGTD--VYLRLRHIDGRE 407 SR YA+Y G LQL S++G GTD +YL+ D E Sbjct: 332 ISRLYAKYFQGDLQLFSMEGFGTDAVIYLKALSTDSVE 369 >2Q8F-A nrPDB Length = 407 Score = 162 bits (409), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 113/341 (33%), Positives = 182/341 (53%), Gaps = 46/341 (13%) Query: 93 YLQQELPVRIAHRIKGFRSLPFIIGCNPTILHVHELYIRAFQKLTDFPPIKDQADE---- 148 +L+QELPVR+A+ +K LP + P++ V YI++ Q+L DF KD++ E Sbjct: 49 FLRQELPVRLANIMKEISLLPDNLLRTPSVQLVQSWYIQSLQELLDF---KDKSAEDAKA 105 Query: 149 -AQYCQLVRQLLDDHKDVVTLLAEGLRESRKHIQDEKL----VRYFLDKTLTSRLGIRML 203 + V ++ + H DV+ +A+G+ E ++ + + V+YFLD+ SR+ IRML Sbjct: 106 IYDFTDTVIRIRNRHNDVIPTMAQGVIEYKESFGVDPVTSQNVQYFLDRFYMSRISIRML 165 Query: 204 ATHHLALHEDKPD-------FVGIICTRLSPKKIIEKWVDFARRLCEHKYGNAPRVRING 256 H L K +G I + ++I+ + ARRLC+ Y N+P + + Sbjct: 166 LNQHSLLFGGKGKGSPSHRKHIGSINPNCNVLEVIKDGYENARRLCDLYYINSPELELE- 224 Query: 257 HVAARFP-------FIPMPLDYILPELLKNAMRATMESHLDTPYNVP-DVVITIANNDID 308 + A+ P ++P L +++ EL KNAMRATME H + P V +T+ N D Sbjct: 225 ELNAKSPGQPIQVVYVPSHLYHMVFELFKNAMRATMEHHANRGVYPPIQVHVTLGNED-- 282 Query: 309 LIIRISDRGGGIAHKDLDRVMDYHFTTAEASTQDPRINPLFGHLDMHSGGQSGPMHGFGF 368 L +++SDRGGG+ + +DR+ +Y ++TA PR+ ++ P+ GFG+ Sbjct: 283 LTVKMSDRGGGVPLRKIDRLFNYMYSTAPR----PRV----------ETSRAVPLAGFGY 328 Query: 369 GLPTSRAYAEYLGGSLQLQSLQGIGTD--VYLRLRHIDGRE 407 GLP SR YA+Y G L+L SL+G GTD +Y++ D E Sbjct: 329 GLPISRLYAQYFQGDLKLYSLEGYGTDAVIYIKALSTDSIE 369 >2E0A-A nrPDB Length = 394 Score = 159 bits (401), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 101/334 (30%), Positives = 168/334 (50%), Gaps = 33/334 (9%) Query: 90 SGRYLQQELPVRIAHRIKGFRSLPFIIGCNPTILHVHELYIRAFQKLTDF--PPIKDQAD 147 S +L+QELPVR+A+ +K LP + ++ V YI++ L +F DQ Sbjct: 36 SFAFLRQELPVRLANILKEIDILPTQLVNTSSVQLVKSWYIQSLMDLVEFHEKSPDDQKA 95 Query: 148 EAQYCQLVRQLLDDHKDVVTLLAEGLRESRKHIQDEKL----VRYFLDKTLTSRLGIRML 203 + + + ++ + H +VV +A+G+ E + + + ++YFLD+ +R+ RML Sbjct: 96 LSDFVDTLIKVRNRHHNVVPTMAQGIIEYKDACTVDPVTNQNLQYFLDRFYMNRISTRML 155 Query: 204 ATHHLALHED----KPDFVGIICTRLSPKKIIEKWVDFARRLCEHKYGNAPRVRINGHVA 259 H+ + D P +G I +++ + +R LC+ Y ++P +++ V Sbjct: 156 MNQHILIFSDSQTGNPSHIGSIDPNCDVVAVVQDAFECSRMLCDQYYLSSPELKLT-QVN 214 Query: 260 ARFP-------FIPMPLDYILPELLKNAMRATMESHLDTPYNVPDVVITIANNDIDLIIR 312 +FP ++P L ++L EL KNAMRAT+E + P P VI + + DL I+ Sbjct: 215 GKFPDQPIHIVYVPSHLHHMLFELFKNAMRATVEHQENQPSLTPIEVIVVLGKE-DLTIK 273 Query: 313 ISDRGGGIAHKDLDRVMDYHFTTAEASTQDPRINPLFGHLDMHSGGQSGPMHGFGFGLPT 372 ISDRGGG+ + +DR+ Y ++TA D ++ P+ GFG+GLP Sbjct: 274 ISDRGGGVPLRIIDRLFSYTYSTAPTPVMD--------------NSRNAPLAGFGYGLPI 319 Query: 373 SRAYAEYLGGSLQLQSLQGIGTDVYLRLRHIDGR 406 SR YA+Y G L L SL G GTD + L+ + Sbjct: 320 SRLYAKYFQGDLNLYSLSGYGTDAIIYLKALSSE 353 >1Y8N-A nrPDB Length = 419 Score = 153 bits (386), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 99/336 (29%), Positives = 174/336 (51%), Gaps = 35/336 (10%) Query: 93 YLQQELPVRIAHRIKGFRSLPFIIGCNPTILHVHELYIRAFQKLTDFPPIKDQADEA--Q 150 +L++ELPVR+A+ ++ LP + P++ V Y+++F +L ++ + + Sbjct: 61 FLRKELPVRLANTMREVNLLPDNLLNRPSVGLVQSWYMQSFLELLEYENKSPEDPQVLDN 120 Query: 151 YCQLVRQLLDDHKDVVTLLAEGLRESRKHIQDEKLV----RYFLDKTLTSRLGIRMLATH 206 + Q++ ++ + H DVV +A+G+ E ++ + + +YFLD+ T+R+ RML Sbjct: 121 FLQVLIKVRNRHNDVVPTMAQGVIEYKEKFGFDPFISTNIQYFLDRFYTNRISFRMLINQ 180 Query: 207 HLAL-----HEDKPDFVGIICTRLSPKKIIEKWVDFARRLCEHKYGNAPRVRINGHVAAR 261 H L + P +G I + +++ + A+ LCE Y AP + + A+ Sbjct: 181 HTLLFGGDTNPVHPKHIGSIDPTCNVADVVKDAYETAKMLCEQYYLVAPELEVE-EFNAK 239 Query: 262 FP-------FIPMPLDYILPELLKNAMRATMESHLDTPYNVPDVVITIANNDIDLIIRIS 314 P ++P L ++L EL KN+MRAT+E + D P V + DL I+IS Sbjct: 240 APDKPIQVVYVPSHLFHMLFELFKNSMRATVELYEDRKEGYPAVKTLVTLGKEDLSIKIS 299 Query: 315 DRGGGIAHKDLDRVMDYHFTTAEASTQDPRINPLFGHLDMHSGGQSGPMHGFGFGLPTSR 374 D GGG+ + +DR+ +Y ++TA + +P ++ P+ GFG+GLP SR Sbjct: 300 DLGGGVPLRKIDRLFNYMYSTAPRPSLEP--------------TRAAPLAGFGYGLPISR 345 Query: 375 AYAEYLGGSLQLQSLQGIGTDVYLRLRHIDGREESF 410 YA Y G L+L S++G+GTD + L+ + ESF Sbjct: 346 LYARYFQGDLKLYSMEGVGTDAVIYLKALSS--ESF 379 >4U7O-A nrPDB Length = 277 Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust. Identities = 28/92 (30%), Positives = 40/92 (43%), Gaps = 20/92 (21%) Query: 309 LIIRISDRGGGIAHKDLDRVMDYHFTTAEASTQDPRINPLFGHLDMHSGGQSGPMHGFGF 368 +II ISD+G GI DL V D F +A +S G G Sbjct: 189 VIISISDQGLGIPRADLGHVFDRFFRVDKA--------------------RSRAQGGTGL 228 Query: 369 GLPTSRAYAEYLGGSLQLQSLQGIGTDVYLRL 400 GL S+ + LGG + + S++G G+ Y+ L Sbjct: 229 GLAISKEVVQMLGGRIWVDSVEGKGSTFYISL 260 >3SL2-A nrPDB Length = 177 Score = 37.0 bits (84), Expect = 0.017, Method: Compositional matrix adjust. Identities = 24/102 (23%), Positives = 44/102 (43%), Gaps = 20/102 (19%) Query: 309 LIIRISDRGGGIAHKDLDRVMDYHFTTAEASTQDPRINPLFGHLDMHSGGQSGPMHGFGF 368 L I + D G GI KD+++V D + +A T+ + G G Sbjct: 78 LYISVKDEGIGIPKKDVEKVFDRFYRVDKARTR--------------------KLGGTGL 117 Query: 369 GLPTSRAYAEYLGGSLQLQSLQGIGTDVYLRLRHIDGREESF 410 GL ++ + GG + S++G GT + L + + +E+ + Sbjct: 118 GLAIAKEMVQAHGGDIWADSIEGKGTTITFTLPYKEEQEDDW 159 >4I5S-A nrPDB Length = 450 Score = 32.7 bits (73), Expect = 0.29, Method: Compositional matrix adjust. Identities = 31/126 (24%), Positives = 50/126 (39%), Gaps = 34/126 (26%) Query: 272 ILPELLKNAMRATMESHLDTPYNVPD---VVITIANNDIDLIIRISDRGGGIAHKDLDRV 328 ++ +L NA++ + PD V IT+ D LI+ ISD+G GI KDL + Sbjct: 331 VIDNILNNAIKYS-----------PDGGKVTITMQTTDTQLILSISDQGLGIPKKDLPLI 379 Query: 329 MDYHFTTAEASTQDPRINPLFGHLDMHSGGQSGPMHGFGFGLPTSRAYAEYLGGSLQLQS 388 D + +A +S G G GL ++ + G + S Sbjct: 380 FDRFYRVDKA--------------------RSRAQGGTGLGLAIAKEIVKQHKGFIWANS 419 Query: 389 LQGIGT 394 +G G+ Sbjct: 420 EEGEGS 425 >3D36-A nrPDB Length = 244 Score = 31.2 bits (69), Expect = 0.97, Method: Compositional matrix adjust. Identities = 31/112 (27%), Positives = 53/112 (47%), Gaps = 12/112 (10%) Query: 224 RLSPKKIIEKWVDFARRLCEHKYGNAPRVRINGHVAARFPFIPMPLDYILPELLKNAMRA 283 +L+ K IE+ +D R L N V I +A PF + + L N M+ Sbjct: 83 KLNVKLEIERVIDILRPL-----ANMSCVDIQATLA---PFSVIGEREKFRQCLLNVMKN 134 Query: 284 TMESHLDTPYNVPDVVITIANNDIDLIIRISDRGGGIAHKDLDRVMDYHFTT 335 +E+ + V ++I N + +IRI+D G G+ + L+R+ + +FTT Sbjct: 135 AIEAMPNG--GTLQVYVSIDNGRV--LIRIADTGVGMTKEQLERLGEPYFTT 182 >5L3Q-B nrPDB Length = 638 Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust. Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 1/53 (1%) Query: 213 DKPDFVGIICTRLSPKKIIEKWVDFARRLCEHKYGNAPRVRINGHVAARFPFI 265 + PD V + L + +++ V F R L +H PR+ I+G V +F I Sbjct: 542 NTPDLVLFVGEALVGNEAVDQLVKFNRALADHSMAQTPRL-IDGIVLTKFDTI 593 >3L72-A nrPDB Length = 446 Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust. Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 14/60 (23%) Query: 275 ELLKNAMRATMESHLDTPYNVPDVVITIANNDIDLIIRISDRGGGIAHKDLDRVMDYHFT 334 E +K+ RA + S++DT + P +V+ A GGI+HK+L HF+ Sbjct: 172 ENIKHLTRADLASYIDTHFKAPRMVLAAA--------------GGISHKELVDAARQHFS 217 >1LVB-A nrPDB Length = 243 Score = 28.9 bits (63), Expect = 4.2, Method: Compositional matrix adjust. Identities = 25/81 (30%), Positives = 39/81 (48%), Gaps = 9/81 (11%) Query: 336 AEASTQDPR-INPL---FGHLDMHSGGQSGPMHGFGFG--LPTSRAYAEYLGGSLQLQSL 389 E+ + PR NP+ HL S G + ++G GFG + T++ G+L +QSL Sbjct: 8 GESLFKGPRDYNPISSTICHLTNESDGHTTSLYGIGFGPFIITNKHLFRRNNGTLLVQSL 67 Query: 390 QG---IGTDVYLRLRHIDGRE 407 G + L+ IDGR+ Sbjct: 68 HGVFKVKNTTTLQQHLIDGRD 88 >1XRE-A nrPDB Length = 217 Score = 28.5 bits (62), Expect = 5.9, Method: Compositional matrix adjust. Identities = 11/23 (47%), Positives = 17/23 (73%) Query: 313 ISDRGGGIAHKDLDRVMDYHFTT 335 +S RGGG + D+ +V+DY+F T Sbjct: 99 MSPRGGGEPNGDVAKVIDYYFNT 121 >5XX1-A nrPDB Length = 756 Score = 28.1 bits (61), Expect = 6.5, Method: Compositional matrix adjust. Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 3/45 (6%) Query: 343 PRINPLFGHLDMHSGGQSGPMHGFGFGL---PTSRAYAEYLGGSL 384 P N L + D+H + P H G G P+ R Y +Y G +L Sbjct: 142 PLFNALMKYSDIHEYSWAAPGHQGGVGFTKTPSGRFYHDYYGENL 186 >6AZR-A nrPDB Length = 259 Score = 28.1 bits (61), Expect = 7.0, Method: Compositional matrix adjust. Identities = 27/138 (19%), Positives = 57/138 (41%), Gaps = 24/138 (17%) Query: 265 IPMPLD-YILPELLKNAMRATMESHLD-TPYNVPD--VVITIANNDIDLIIRISDRGGGI 320 +P P++ YI P ++ + + + + + + PD V + + D ++I + D G GI Sbjct: 127 VPCPVEAYIDPTRIRQVLLNLLNNGVKYSKKDAPDKYVKVILDEKDGGVLIIVEDNGIGI 186 Query: 321 AHKDLDRVMDYHFTTAEASTQDPRINPLFGHLDMHSGGQSGPMHGFGFGLPTSRAYAEYL 380 DR+ + + + T + + G G GL ++ E Sbjct: 187 PDHAKDRIFEQFYRVDSSLTYE--------------------VPGTGLGLAITKEIVELH 226 Query: 381 GGSLQLQSLQGIGTDVYL 398 GG + ++S G G+ ++ Sbjct: 227 GGRIWVESEVGKGSRFFV 244 >2OG6-A nrPDB Length = 357 Score = 28.1 bits (61), Expect = 7.0, Method: Compositional matrix adjust. Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 1/30 (3%) Query: 199 GIRMLATHHL-ALHEDKPDFVGIICTRLSP 227 G +L H+ A HE +PDFV ++C R P Sbjct: 172 GSTLLTFHNENAFHEHRPDFVMLLCLRADP 201 >2P22-C nrPDB Length = 192 Score = 27.7 bits (60), Expect = 8.7, Method: Compositional matrix adjust. Identities = 25/62 (40%), Positives = 27/62 (43%), Gaps = 3/62 (4%) Query: 115 IIGCNPTILHVHELYIRAFQKLTDFPPIKDQADEAQYCQLVRQLLDDH--KDVVTLLAEG 172 II T H ELY+ F LTDF K A Q+ QL D H KD V L E Sbjct: 43 IIDLIQTHRHQLELYVTKFNPLTDFAG-KIHAFRDQFKQLEENFEDLHEQKDKVQALLEN 101 Query: 173 LR 174 R Sbjct: 102 AR 103 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 4DZY-A nrPDB 687 0.0 1Y8N-A nrPDB 442 e-124 2Q8F-A nrPDB 435 e-122 3CRK-A nrPDB 432 e-121 2E0A-A nrPDB 432 e-121 4U7O-A nrPDB 92 5e-19 Sequences not found previously or not previously below threshold: 3SL2-A nrPDB 74 1e-13 4I5S-A nrPDB 70 2e-12 6AZR-A nrPDB 60 2e-09 4GCZ-A nrPDB 44 1e-04 4JPB-A nrPDB 44 1e-04 1I5D-A nrPDB 41 7e-04 4XIV-A nrPDB 41 9e-04 3JA6-C nrPDB 40 0.001 4PL9-A nrPDB 39 0.006 4Q20-A nrPDB 37 0.015 6DK7-A nrPDB 36 0.026 3D36-A nrPDB 35 0.040 5M4A-A nrPDB 34 0.17 5JTA-A nrPDB 34 0.18 6BLK-C nrPDB 33 0.21 5IDM-A nrPDB 33 0.22 5IDJ-A nrPDB 33 0.26 6BJC-T nrPDB 32 0.73 3LED-A nrPDB 31 1.0 1Y7W-A nrPDB 31 1.1 1ID0-A nrPDB 31 1.1 4XEM-A nrPDB 30 1.8 2Q2E-B nrPDB 30 2.5 1XRE-A nrPDB 29 2.9 5WMM-A nrPDB 29 3.1 5D6H-A nrPDB 29 4.1 5LQS-A nrPDB 29 4.5 4P7A-A nrPDB 29 5.9 3BDK-A nrPDB 28 8.6 1UB7-A nrPDB 28 9.3 >4DZY-A nrPDB Length = 418 Score = 687 bits (1773), Expect = 0.0, Method: Composition-based stats. Identities = 406/412 (98%), Positives = 409/412 (99%) Query: 1 MILTSVLGSGPRSWSSLWPLLGSSLSLRARSTSATDTHHVELARERSKTVTSFYNQSAID 60 MILTSVLGSGPRS SSLWPLLGSSLSLR RSTSATDTHHVELARERSKTVTSFYNQSAID Sbjct: 1 MILTSVLGSGPRSGSSLWPLLGSSLSLRVRSTSATDTHHVELARERSKTVTSFYNQSAID 60 Query: 61 VAAEKPSVRLTPTMMLYSGRSQDGSHLLKSGRYLQQELPVRIAHRIKGFRSLPFIIGCNP 120 V AEKPSVRLTPTMMLYSGRSQDGSHLLKSGRYLQQELPVRIAHRIKGFRSLPFIIGCNP Sbjct: 61 VVAEKPSVRLTPTMMLYSGRSQDGSHLLKSGRYLQQELPVRIAHRIKGFRSLPFIIGCNP 120 Query: 121 TILHVHELYIRAFQKLTDFPPIKDQADEAQYCQLVRQLLDDHKDVVTLLAEGLRESRKHI 180 TILHVHELYIRAFQKLTDFPPIKDQADEAQYCQLVRQLLDDHKDVVTLLAEGLRESRKHI Sbjct: 121 TILHVHELYIRAFQKLTDFPPIKDQADEAQYCQLVRQLLDDHKDVVTLLAEGLRESRKHI 180 Query: 181 QDEKLVRYFLDKTLTSRLGIRMLATHHLALHEDKPDFVGIICTRLSPKKIIEKWVDFARR 240 +DEKLVRYFLDKTLTSRLGIRMLATHHLALHEDKPDFVGIICTRLSPKKIIEKWVDFARR Sbjct: 181 EDEKLVRYFLDKTLTSRLGIRMLATHHLALHEDKPDFVGIICTRLSPKKIIEKWVDFARR 240 Query: 241 LCEHKYGNAPRVRINGHVAARFPFIPMPLDYILPELLKNAMRATMESHLDTPYNVPDVVI 300 LCEHKYGNAPRVRINGHVAARFPFIPMPLDYILPELLKNAMRATMESHLDTPYNVPDVVI Sbjct: 241 LCEHKYGNAPRVRINGHVAARFPFIPMPLDYILPELLKNAMRATMESHLDTPYNVPDVVI 300 Query: 301 TIANNDIDLIIRISDRGGGIAHKDLDRVMDYHFTTAEASTQDPRINPLFGHLDMHSGGQS 360 TIANND+DLIIRISDRGGGIAHKDLDRVMDYHFTTAEASTQDPRI+PLFGHLDMHSGGQS Sbjct: 301 TIANNDVDLIIRISDRGGGIAHKDLDRVMDYHFTTAEASTQDPRISPLFGHLDMHSGGQS 360 Query: 361 GPMHGFGFGLPTSRAYAEYLGGSLQLQSLQGIGTDVYLRLRHIDGREESFRI 412 GPMHGFGFGLPTSRAYAEYLGGSLQLQSLQGIGTDVYLRLRHIDGREESFRI Sbjct: 361 GPMHGFGFGLPTSRAYAEYLGGSLQLQSLQGIGTDVYLRLRHIDGREESFRI 412 >1Y8N-A nrPDB Length = 419 Score = 442 bits (1136), Expect = e-124, Method: Composition-based stats. Identities = 100/339 (29%), Positives = 174/339 (51%), Gaps = 35/339 (10%) Query: 90 SGRYLQQELPVRIAHRIKGFRSLPFIIGCNPTILHVHELYIRAFQKLTDFPPIKDQADEA 149 S +L++ELPVR+A+ ++ LP + P++ V Y+++F +L ++ + + Sbjct: 58 SYMFLRKELPVRLANTMREVNLLPDNLLNRPSVGLVQSWYMQSFLELLEYENKSPEDPQV 117 Query: 150 --QYCQLVRQLLDDHKDVVTLLAEGLRESRKHIQDEKLV----RYFLDKTLTSRLGIRML 203 + Q++ ++ + H DVV +A+G+ E ++ + + +YFLD+ T+R+ RML Sbjct: 118 LDNFLQVLIKVRNRHNDVVPTMAQGVIEYKEKFGFDPFISTNIQYFLDRFYTNRISFRML 177 Query: 204 ATHHLALHED-----KPDFVGIICTRLSPKKIIEKWVDFARRLCEHKYGNAPRVRINGHV 258 H L P +G I + +++ + A+ LCE Y AP + + Sbjct: 178 INQHTLLFGGDTNPVHPKHIGSIDPTCNVADVVKDAYETAKMLCEQYYLVAPELEVE-EF 236 Query: 259 AARFP-------FIPMPLDYILPELLKNAMRATMESHLDTPYNVPDVVITIANNDIDLII 311 A+ P ++P L ++L EL KN+MRAT+E + D P V + DL I Sbjct: 237 NAKAPDKPIQVVYVPSHLFHMLFELFKNSMRATVELYEDRKEGYPAVKTLVTLGKEDLSI 296 Query: 312 RISDRGGGIAHKDLDRVMDYHFTTAEASTQDPRINPLFGHLDMHSGGQSGPMHGFGFGLP 371 +ISD GGG+ + +DR+ +Y ++TA + +P ++ P+ GFG+GLP Sbjct: 297 KISDLGGGVPLRKIDRLFNYMYSTAPRPSLEP--------------TRAAPLAGFGYGLP 342 Query: 372 TSRAYAEYLGGSLQLQSLQGIGTDVYLRLRHIDGREESF 410 SR YA Y G L+L S++G+GTD + L+ + ESF Sbjct: 343 ISRLYARYFQGDLKLYSMEGVGTDAVIYLKALSS--ESF 379 >2Q8F-A nrPDB Length = 407 Score = 435 bits (1118), Expect = e-122, Method: Composition-based stats. Identities = 107/340 (31%), Positives = 176/340 (51%), Gaps = 38/340 (11%) Query: 90 SGRYLQQELPVRIAHRIKGFRSLPFIIGCNPTILHVHELYIRAFQKLTDFPPIK--DQAD 147 S +L+QELPVR+A+ +K LP + P++ V YI++ Q+L DF D Sbjct: 46 SFMFLRQELPVRLANIMKEISLLPDNLLRTPSVQLVQSWYIQSLQELLDFKDKSAEDAKA 105 Query: 148 EAQYCQLVRQLLDDHKDVVTLLAEGLRESRKHIQDEKL----VRYFLDKTLTSRLGIRML 203 + V ++ + H DV+ +A+G+ E ++ + + V+YFLD+ SR+ IRML Sbjct: 106 IYDFTDTVIRIRNRHNDVIPTMAQGVIEYKESFGVDPVTSQNVQYFLDRFYMSRISIRML 165 Query: 204 ATHHLALHEDKP-------DFVGIICTRLSPKKIIEKWVDFARRLCEHKYGNAPRVRING 256 H L K +G I + ++I+ + ARRLC+ Y N+P + + Sbjct: 166 LNQHSLLFGGKGKGSPSHRKHIGSINPNCNVLEVIKDGYENARRLCDLYYINSPELELE- 224 Query: 257 HVAARFP-------FIPMPLDYILPELLKNAMRATMESHLDTPYNVPDVVITIANNDIDL 309 + A+ P ++P L +++ EL KNAMRATME H + P + + + + DL Sbjct: 225 ELNAKSPGQPIQVVYVPSHLYHMVFELFKNAMRATMEHHANRGV-YPPIQVHVTLGNEDL 283 Query: 310 IIRISDRGGGIAHKDLDRVMDYHFTTAEASTQDPRINPLFGHLDMHSGGQSGPMHGFGFG 369 +++SDRGGG+ + +DR+ +Y ++TA + ++ P+ GFG+G Sbjct: 284 TVKMSDRGGGVPLRKIDRLFNYMYSTAPRPRVE--------------TSRAVPLAGFGYG 329 Query: 370 LPTSRAYAEYLGGSLQLQSLQGIGTD--VYLRLRHIDGRE 407 LP SR YA+Y G L+L SL+G GTD +Y++ D E Sbjct: 330 LPISRLYAQYFQGDLKLYSLEGYGTDAVIYIKALSTDSIE 369 >3CRK-A nrPDB Length = 407 Score = 432 bits (1111), Expect = e-121, Method: Composition-based stats. Identities = 108/338 (31%), Positives = 171/338 (50%), Gaps = 37/338 (10%) Query: 90 SGRYLQQELPVRIAHRIKGFRSLPFIIGCNPTILHVHELYIRAFQKLTDFPPIKDQADEA 149 S +L+QELPVR+A+ +K LP + P++ V Y+++ + +F KD D Sbjct: 49 SFTFLRQELPVRLANIMKEINLLPDRVLSTPSVQLVQSWYVQSLLDIMEFLD-KDPEDHR 107 Query: 150 ---QYCQLVRQLLDDHKDVVTLLAEGLRESRKHIQDEKL----VRYFLDKTLTSRLGIRM 202 Q+ + + + H DVV +A+G+ E + D+ + ++YFLD+ SR+ IRM Sbjct: 108 TLSQFTDALVTIRNRHNDVVPTMAQGVLEYKDTYGDDPVSNQNIQYFLDRFYLSRISIRM 167 Query: 203 LATHHLALHED-----KPDFVGIICTRLSPKKIIEKWVDFARRLCEHKYGNAPRVRI--- 254 L H + + P +G I S +++ D A+ LC+ Y +P + I Sbjct: 168 LINQHTLIFDGSTNPAHPKHIGSIDPNCSVSDVVKDAYDMAKLLCDKYYMASPDLEIQEV 227 Query: 255 ---NGHVAARFPFIPMPLDYILPELLKNAMRATMESHLDTPYNVPDVVITIANNDIDLII 311 N ++P L ++L EL KNAMRAT+ESH + +P + I +A + DL I Sbjct: 228 NATNATQPIHMVYVPSHLYHMLFELFKNAMRATVESHE-SSLTLPPIKIMVALGEEDLSI 286 Query: 312 RISDRGGGIAHKDLDRVMDYHFTTAEASTQDPRINPLFGHLDMHSGGQSGPMHGFGFGLP 371 ++SDRGGG+ + ++R+ Y ++TA G P+ GFG+GLP Sbjct: 287 KMSDRGGGVPLRKIERLFSYMYSTAPTP---------------QPGTGGTPLAGFGYGLP 331 Query: 372 TSRAYAEYLGGSLQLQSLQGIGTD--VYLRLRHIDGRE 407 SR YA+Y G LQL S++G GTD +YL+ D E Sbjct: 332 ISRLYAKYFQGDLQLFSMEGFGTDAVIYLKALSTDSVE 369 >2E0A-A nrPDB Length = 394 Score = 432 bits (1110), Expect = e-121, Method: Composition-based stats. Identities = 101/334 (30%), Positives = 167/334 (50%), Gaps = 33/334 (9%) Query: 90 SGRYLQQELPVRIAHRIKGFRSLPFIIGCNPTILHVHELYIRAFQKLTDF--PPIKDQAD 147 S +L+QELPVR+A+ +K LP + ++ V YI++ L +F DQ Sbjct: 36 SFAFLRQELPVRLANILKEIDILPTQLVNTSSVQLVKSWYIQSLMDLVEFHEKSPDDQKA 95 Query: 148 EAQYCQLVRQLLDDHKDVVTLLAEGLRESRKHIQDEKL----VRYFLDKTLTSRLGIRML 203 + + + ++ + H +VV +A+G+ E + + + ++YFLD+ +R+ RML Sbjct: 96 LSDFVDTLIKVRNRHHNVVPTMAQGIIEYKDACTVDPVTNQNLQYFLDRFYMNRISTRML 155 Query: 204 ATHHLALHED----KPDFVGIICTRLSPKKIIEKWVDFARRLCEHKYGNAPRVRINGHVA 259 H+ + D P +G I +++ + +R LC+ Y ++P +++ V Sbjct: 156 MNQHILIFSDSQTGNPSHIGSIDPNCDVVAVVQDAFECSRMLCDQYYLSSPELKLT-QVN 214 Query: 260 ARFP-------FIPMPLDYILPELLKNAMRATMESHLDTPYNVPDVVITIANNDIDLIIR 312 +FP ++P L ++L EL KNAMRAT+E + P P VI + DL I+ Sbjct: 215 GKFPDQPIHIVYVPSHLHHMLFELFKNAMRATVEHQENQPSLTPIEVIVV-LGKEDLTIK 273 Query: 313 ISDRGGGIAHKDLDRVMDYHFTTAEASTQDPRINPLFGHLDMHSGGQSGPMHGFGFGLPT 372 ISDRGGG+ + +DR+ Y ++TA D ++ P+ GFG+GLP Sbjct: 274 ISDRGGGVPLRIIDRLFSYTYSTAPTPVMD--------------NSRNAPLAGFGYGLPI 319 Query: 373 SRAYAEYLGGSLQLQSLQGIGTDVYLRLRHIDGR 406 SR YA+Y G L L SL G GTD + L+ + Sbjct: 320 SRLYAKYFQGDLNLYSLSGYGTDAIIYLKALSSE 353 >4U7O-A nrPDB Length = 277 Score = 91.7 bits (226), Expect = 5e-19, Method: Composition-based stats. Identities = 35/136 (25%), Positives = 53/136 (38%), Gaps = 24/136 (17%) Query: 275 ELLKNAMRATMESHLDTPYNVPDVVITIANNDIDLIIRISDRGGGIAHKDLDRVMDYHFT 334 ++L N M ++ D V + +II ISD+G GI DL V D F Sbjct: 159 QVLDNIMNNAIKYSPDGGV----VTCRLLETHNQVIISISDQGLGIPRADLGHVFDRFFR 214 Query: 335 TAEASTQDPRINPLFGHLDMHSGGQSGPMHGFGFGLPTSRAYAEYLGGSLQLQSLQGIGT 394 +A +S G G GL S+ + LGG + + S++G G+ Sbjct: 215 VDKA--------------------RSRAQGGTGLGLAISKEVVQMLGGRIWVDSVEGKGS 254 Query: 395 DVYLRLRHIDGREESF 410 Y+ L + EE Sbjct: 255 TFYISLPYEPYEEEDL 270 >3SL2-A nrPDB Length = 177 Score = 74.4 bits (181), Expect = 1e-13, Method: Composition-based stats. Identities = 24/111 (21%), Positives = 47/111 (42%), Gaps = 20/111 (18%) Query: 300 ITIANNDIDLIIRISDRGGGIAHKDLDRVMDYHFTTAEASTQDPRINPLFGHLDMHSGGQ 359 I + + L I + D G GI KD+++V D + +A + Sbjct: 69 IDVNEEEELLYISVKDEGIGIPKKDVEKVFDRFYRVDKA--------------------R 108 Query: 360 SGPMHGFGFGLPTSRAYAEYLGGSLQLQSLQGIGTDVYLRLRHIDGREESF 410 + + G G GL ++ + GG + S++G GT + L + + +E+ + Sbjct: 109 TRKLGGTGLGLAIAKEMVQAHGGDIWADSIEGKGTTITFTLPYKEEQEDDW 159 >4I5S-A nrPDB Length = 450 Score = 69.7 bits (169), Expect = 2e-12, Method: Composition-based stats. Identities = 30/130 (23%), Positives = 50/130 (38%), Gaps = 24/130 (18%) Query: 275 ELLKNAMRATMESHLDTPYNVPD----VVITIANNDIDLIIRISDRGGGIAHKDLDRVMD 330 E+ + M +++ L+ V IT+ D LI+ ISD+G GI KDL + D Sbjct: 322 EIDTDKMTQVIDNILNNAIKYSPDGGKVTITMQTTDTQLILSISDQGLGIPKKDLPLIFD 381 Query: 331 YHFTTAEASTQDPRINPLFGHLDMHSGGQSGPMHGFGFGLPTSRAYAEYLGGSLQLQSLQ 390 + +A +S G G GL ++ + G + S + Sbjct: 382 RFYRVDKA--------------------RSRAQGGTGLGLAIAKEIVKQHKGFIWANSEE 421 Query: 391 GIGTDVYLRL 400 G G+ + L Sbjct: 422 GEGSTFTIVL 431 >6AZR-A nrPDB Length = 259 Score = 60.1 bits (144), Expect = 2e-09, Method: Composition-based stats. Identities = 32/177 (18%), Positives = 62/177 (35%), Gaps = 26/177 (14%) Query: 224 RLSPKKIIEKWVDFARRLCEHKYGNAPRVRINGHVAARFPFIPMPLDYILPELLKNAMRA 283 ++ ++E V+ + N N P + +L LL N ++ Sbjct: 96 KVDLCDLVESAVNAIKEFASSHNVNV-LFESNVPCPVEAYIDPTRIRQVLLNLLNNGVKY 154 Query: 284 TMESHLDTPYNVPDVVITIANNDIDLIIRISDRGGGIAHKDLDRVMDYHFTTAEASTQDP 343 S D P V + + D ++I + D G GI DR+ + + + T + Sbjct: 155 ---SKKDAPDKY--VKVILDEKDGGVLIIVEDNGIGIPDHAKDRIFEQFYRVDSSLTYE- 208 Query: 344 RINPLFGHLDMHSGGQSGPMHGFGFGLPTSRAYAEYLGGSLQLQSLQGIGTDVYLRL 400 + G G GL ++ E GG + ++S G G+ ++ + Sbjct: 209 -------------------VPGTGLGLAITKEIVELHGGRIWVESEVGKGSRFFVWI 246 >4GCZ-A nrPDB Length = 385 Score = 44.3 bits (103), Expect = 1e-04, Method: Composition-based stats. Identities = 30/140 (21%), Positives = 44/140 (31%), Gaps = 31/140 (22%) Query: 269 LDYILPELLKNAMRATMESHLDTPYNVPDVVITIANNDIDLIIRISDRGGGIAHKDLDRV 328 + +L L +NA+ A +S VV D + + +SD G G + + Sbjct: 269 IQQVLVNLFRNALEAMAQSQRRE-----LVVTNTPAADDMIEVEVSDTGSGFQDDVIPNL 323 Query: 329 MDYHFTTAEASTQDPRINPLFGHLDMHSGGQSGPMHGFGFGLPTSRAYAEYLGGSLQLQS 388 FTT + G G GL SR+ E GG + +S Sbjct: 324 FQTFFTTKDT--------------------------GMGVGLSISRSIIEAHGGRMWAES 357 Query: 389 LQGIGTDVYLRLRHIDGREE 408 G L D E Sbjct: 358 NASGGATFRFTLPAADENLE 377 >4JPB-A nrPDB Length = 319 Score = 43.9 bits (102), Expect = 1e-04, Method: Composition-based stats. Identities = 30/134 (22%), Positives = 57/134 (42%), Gaps = 6/134 (4%) Query: 273 LPELLKNAMRATMESHLDT-PYNVPDVVITIAN---NDIDLIIRISDRGGGIAHKDLDR- 327 L LL+NA+ +E + P + I + +++I + D G GI + + R Sbjct: 52 LLHLLRNAIDHGIEPKEERIAKGKPPIGTLILSARHEGNNVVIEVEDDGRGIDKEKIIRK 111 Query: 328 -VMDYHFTTAEASTQDPRINPLFGHLDMHSGGQSGPMHGFGFGLPTSRAYAEYLGGSLQL 386 + ++A+T + F + + + G G G+ + E L GS+ + Sbjct: 112 AIEKGLIDESKAATLSDQEILNFLVPGFSTKEKVSEVSGRGVGMDVVKNVVESLNGSISI 171 Query: 387 QSLQGIGTDVYLRL 400 +S + GT V +RL Sbjct: 172 ESEKDKGTKVTIRL 185 >1I5D-A nrPDB Length = 191 Score = 41.2 bits (95), Expect = 7e-04, Method: Composition-based stats. Identities = 31/138 (22%), Positives = 57/138 (41%), Gaps = 13/138 (9%) Query: 273 LPELLKNAMRATMESHLDT-PYNVPDVVITIAN---NDIDLIIRISDRGGGIAHKDLDR- 327 L LL+NA+ +E + P + I + +++I + D G GI + + R Sbjct: 54 LLHLLRNAIDHGIEPKEERIAKGKPPIGTLILSARHEGNNVVIEVEDDGRGIDKEKIIRK 113 Query: 328 -----VMDYHFTTAEASTQDPRINPLFGHLDMHSGGQSGPMHGFGFGLPTSRAYAEYLGG 382 ++D + A+ D I + + + G G G+ + E L G Sbjct: 114 AIEKGLID---ESKAATLSDQEILNFLFVPGFSTKEKVSEVSGRGVGMDVVKNVVESLNG 170 Query: 383 SLQLQSLQGIGTDVYLRL 400 S+ ++S + GT V +RL Sbjct: 171 SISIESEKDKGTKVTIRL 188 >4XIV-A nrPDB Length = 252 Score = 41.2 bits (95), Expect = 9e-04, Method: Composition-based stats. Identities = 31/138 (22%), Positives = 57/138 (41%), Gaps = 13/138 (9%) Query: 273 LPELLKNAMRATMESHLDT-PYNVPDVVITIAN---NDIDLIIRISDRGGGIAHKDLDR- 327 L LL+NA+ +E + P + I + +++I + D G GI + + R Sbjct: 115 LLHLLRNAIDHGIEPKEERIAKGKPPIGTLILSARHEGNNVVIEVEDDGRGIDKEKIIRK 174 Query: 328 -----VMDYHFTTAEASTQDPRINPLFGHLDMHSGGQSGPMHGFGFGLPTSRAYAEYLGG 382 ++D + A+ D I + + + G G G+ + E L G Sbjct: 175 AIEKGLID---ESKAATLSDQEILNFLFVPGFSTKEKVSEVSGRGVGMDVVKNVVESLNG 231 Query: 383 SLQLQSLQGIGTDVYLRL 400 S+ ++S + GT V +RL Sbjct: 232 SISIESEKDKGTKVTIRL 249 >3JA6-C nrPDB Length = 379 Score = 40.5 bits (93), Expect = 0.001, Method: Composition-based stats. Identities = 31/138 (22%), Positives = 57/138 (41%), Gaps = 13/138 (9%) Query: 273 LPELLKNAMRATMESHLDT-PYNVPDVVITIAN---NDIDLIIRISDRGGGIAHKDLDR- 327 L LL+NA+ +E + P + I + +++I + D G GI + + R Sbjct: 111 LLHLLRNAIDHGIEPKEERIAKGKPPIGTLILSARHEGNNVVIEVEDDGRGIDKEKIIRK 170 Query: 328 -----VMDYHFTTAEASTQDPRINPLFGHLDMHSGGQSGPMHGFGFGLPTSRAYAEYLGG 382 ++D + A+ D I + + + G G G+ + E L G Sbjct: 171 AIEKGLID---ESKAATLSDQEILNFLFVPGFSTKEKVSEVSGRGVGMDVVKNVVESLNG 227 Query: 383 SLQLQSLQGIGTDVYLRL 400 S+ ++S + GT V +RL Sbjct: 228 SMGIESEKDKGTKVTIRL 245 >4PL9-A nrPDB Length = 183 Score = 38.5 bits (88), Expect = 0.006, Method: Composition-based stats. Identities = 18/97 (18%), Positives = 36/97 (37%), Gaps = 21/97 (21%) Query: 297 DVVITIANNDIDLIIRISDRGGGIAHKDLDRVMDYHFTTAEASTQDPRINPLFGHLDMHS 356 D + + L +++ D G GI +D+ ++ T +T Sbjct: 89 DFFVVPTGSHFYLRVKVKDSGAGINPQDIPKIFTKFAQTQSLAT---------------- 132 Query: 357 GGQSGPMHGFGFGLPTSRAYAEYLGGSLQLQSLQGIG 393 G G GL S+ + + G++ ++S G+G Sbjct: 133 ----RSSGGSGLGLAISKRFVNLMEGNIWIES-DGLG 164 >4Q20-A nrPDB Length = 268 Score = 37.0 bits (84), Expect = 0.015, Method: Composition-based stats. Identities = 27/134 (20%), Positives = 43/134 (32%), Gaps = 38/134 (28%) Query: 269 LDYILPELLKNAMRATMESHLDTPYNVPDVVITIANNDI--DLIIRISDRGGGIAHKDLD 326 L L L++NA+R T P +T++ ++ + +SD G G+ Sbjct: 156 LAQTLDHLVENALRQT----------PPGGRVTLSARRALGEVRLDVSDTGRGVPFHVQA 205 Query: 327 RVMDYHFTTAEASTQDPRINPLFGHLDMHSGGQSGPMHGFGFGLPTSRAYAEYLGGSLQL 386 + D G G GL +A E GG + L Sbjct: 206 HIFDRFV--------------------------GRDRGGPGLGLALVKALVELHGGWVAL 239 Query: 387 QSLQGIGTDVYLRL 400 +S G G+ L Sbjct: 240 ESEPGNGSTFTCHL 253 >6DK7-A nrPDB Length = 227 Score = 36.2 bits (82), Expect = 0.026, Method: Composition-based stats. Identities = 38/183 (20%), Positives = 62/183 (33%), Gaps = 42/183 (22%) Query: 226 SPKKIIEKWVDFARRLCEHKYGNAPRVRINGHVAARFPFI----PMPLDYILPELLKNAM 281 +IE +D R E + R+ + + P + P L ++ LL NA Sbjct: 74 DLNALIEDCLDIFRVKAEQQ-----RIELISFTQPQVPRVIGGDPTRLRQVVLSLLDNAF 128 Query: 282 RATMESHLDTPYNVPDVVITIANNDIDLIIRISDRG----GGIAHKDLDRVMDYHFTTAE 337 + T E +I L++ + D+G IA +D D Sbjct: 129 KQTEE------------------GEILLVVALDDQGETPRLRIAVQDSGHPFD------- 163 Query: 338 ASTQDPRINPLFGHLDMHSGGQSGPMHGFGFGLPTSRAYAEYLGGSLQLQSLQGIGTDVY 397 A ++ + D S + G GL +R +GG +QS GT + Sbjct: 164 AKEREALLTAELHSGDFLSASK----LGSHLGLIIARQLVRLMGGEFGIQSGSSQGTTLS 219 Query: 398 LRL 400 L L Sbjct: 220 LTL 222 >3D36-A nrPDB Length = 244 Score = 35.5 bits (80), Expect = 0.040, Method: Composition-based stats. Identities = 27/122 (22%), Positives = 51/122 (41%), Gaps = 29/122 (23%) Query: 279 NAMRATMESHLDTPYNVPDVVITIANNDIDLIIRISDRGGGIAHKDLDRVMDYHFTTAEA 338 N M+ +E+ + V ++I N ++IRI+D G G+ + L+R+ + +FTT Sbjct: 130 NVMKNAIEAMPNGGTL--QVYVSIDNGR--VLIRIADTGVGMTKEQLERLGEPYFTT--- 182 Query: 339 STQDPRINPLFGHLDMHSGGQSGPMHGFGFGLPTSRAYAEYLGGSLQLQSLQGIGTDVYL 398 + G G G+ E + G+++++S GT V + Sbjct: 183 ----------------------KGVKGTGLGMMVVYRIIESMNGTIRIESEIHKGTTVSI 220 Query: 399 RL 400 L Sbjct: 221 YL 222 >5M4A-A nrPDB Length = 603 Score = 33.5 bits (75), Expect = 0.17, Method: Composition-based stats. Identities = 19/103 (18%), Positives = 30/103 (29%), Gaps = 6/103 (5%) Query: 144 DQADEAQYCQLVRQLLDDHKDVVTLLAEGLRESRKHIQDEKLVRYFLDKTLTSRLGIRML 203 E+ + V V L E ++ D K+ LD+ G+R Sbjct: 274 PPETESDHFDTVLLPYASKHGVT------LDEFKQLYNDGKIKEPKLDEFFLHDRGVRES 327 Query: 204 ATHHLALHEDKPDFVGIICTRLSPKKIIEKWVDFARRLCEHKY 246 E ++ I K DF + C+ KY Sbjct: 328 GHDTTYRFEGVCAYLATIDLNSLLYKYEIDIADFIKEFCDDKY 370 >5JTA-A nrPDB Length = 751 Score = 33.5 bits (75), Expect = 0.18, Method: Composition-based stats. Identities = 19/103 (18%), Positives = 30/103 (29%), Gaps = 6/103 (5%) Query: 144 DQADEAQYCQLVRQLLDDHKDVVTLLAEGLRESRKHIQDEKLVRYFLDKTLTSRLGIRML 203 E+ + V V L E ++ D K+ LD+ G+R Sbjct: 422 PPETESDHFDTVLLPYASKHGVT------LDEFKQLYNDGKIKEPKLDEFFLHDRGVRES 475 Query: 204 ATHHLALHEDKPDFVGIICTRLSPKKIIEKWVDFARRLCEHKY 246 E ++ I K DF + C+ KY Sbjct: 476 GHDTTYRFEGVCAYLATIDLNSLLYKYEIDIADFIKEFCDDKY 518 >6BLK-C nrPDB Length = 158 Score = 33.2 bits (74), Expect = 0.21, Method: Composition-based stats. Identities = 21/92 (22%), Positives = 35/92 (38%), Gaps = 26/92 (28%) Query: 313 ISDRGGGIAHKDLDRVMDYHFTTAEASTQDPRINPLFGHLDMHSGGQSGPMHGFGFGLPT 372 I+D+G GI ++ V + F +A A M G G GL Sbjct: 84 ITDQGPGIPPQERHLVFERFFRSASA----------------------RSMPGSGLGLAI 121 Query: 373 SRAYAEYLGGSLQLQ----SLQGIGTDVYLRL 400 + GG+L++ + Q GT +++ L Sbjct: 122 VKQVVLKHGGALRVDYADPAAQPPGTAIHIVL 153 >5IDM-A nrPDB Length = 179 Score = 33.2 bits (74), Expect = 0.22, Method: Composition-based stats. Identities = 19/90 (21%), Positives = 27/90 (30%), Gaps = 24/90 (26%) Query: 311 IRISDRGGGIAHKDLDRVMDYHFTTAEASTQDPRINPLFGHLDMHSGGQSGPMHGFGFGL 370 I +SD G GI + ++ D FTT G G GL Sbjct: 98 IEVSDDGPGIPPDVMGKIFDPFFTTKPVGE------------------------GTGLGL 133 Query: 371 PTSRAYAEYLGGSLQLQSLQGIGTDVYLRL 400 T + G + + S G + L Sbjct: 134 ATVYGIVKQSDGWIHVHSRPNEGAAFRIFL 163 >5IDJ-A nrPDB Length = 242 Score = 32.8 bits (73), Expect = 0.26, Method: Composition-based stats. Identities = 19/90 (21%), Positives = 27/90 (30%), Gaps = 24/90 (26%) Query: 311 IRISDRGGGIAHKDLDRVMDYHFTTAEASTQDPRINPLFGHLDMHSGGQSGPMHGFGFGL 370 I +SD G GI + ++ D FTT G G GL Sbjct: 172 IEVSDDGPGIPPDVMGKIFDPFFTTKPVGE------------------------GTGLGL 207 Query: 371 PTSRAYAEYLGGSLQLQSLQGIGTDVYLRL 400 T + G + + S G + L Sbjct: 208 ATVYGIVKQSDGWIHVHSRPNEGAAFRIFL 237 >6BJC-T nrPDB Length = 747 Score = 31.6 bits (70), Expect = 0.73, Method: Composition-based stats. Identities = 16/86 (18%), Positives = 37/86 (43%), Gaps = 5/86 (5%) Query: 281 MRATMESHLDTPYNVPDVVITIANNDIDLIIRISDRGGGIAHKD----LDRVMDYHFTTA 336 +++T E L+ + V+ + + + +++ G G K + + +D+HF T Sbjct: 207 LKSTEEQELEKSMKMQQEVVEMRKKNEEFK-KLALAGIGQPVKKSVSQVTKSVDFHFRTD 265 Query: 337 EASTQDPRINPLFGHLDMHSGGQSGP 362 E Q P+ + ++ S + P Sbjct: 266 ERIKQHPKNQEEYKEVNFTSELRKHP 291 >3LED-A nrPDB Length = 392 Score = 30.8 bits (68), Expect = 1.0, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 30/64 (46%), Gaps = 7/64 (10%) Query: 139 FPPIKDQADEAQYCQLVRQLLDDHKDVVTLLAEGLRESRKHIQDEKLVRYFLDKTLTSRL 198 +P +D+AD+ V+Q K+VV L++E + E + I + + L + + Sbjct: 267 WPEGRDKADKL----FVQQGRKVFKEVVPLVSEMIIEHAREIGIDP---HGLKRMWLHQA 319 Query: 199 GIRM 202 I M Sbjct: 320 NINM 323 >1Y7W-A nrPDB Length = 291 Score = 30.8 bits (68), Expect = 1.1, Method: Composition-based stats. Identities = 17/75 (22%), Positives = 28/75 (37%), Gaps = 1/75 (1%) Query: 243 EHKYGNAPRVRINGHVAARFPFIPMPLDYILPELLKNAMRATMESHLDTPYNVPDVVITI 302 + N P + I G + P I + L E N + +E H+ P V T Sbjct: 106 DQPAANLPTIEIGGTTKSFVP-IQFHFHHFLSEHTINGIHYPLELHIVMQEQDPADVATA 164 Query: 303 ANNDIDLIIRISDRG 317 I ++ + S+ G Sbjct: 165 QLAVIGIMYKYSENG 179 >1ID0-A nrPDB Length = 152 Score = 30.8 bits (68), Expect = 1.1, Method: Composition-based stats. Identities = 20/93 (21%), Positives = 27/93 (29%), Gaps = 24/93 (25%) Query: 292 PYNVPDVVITIANNDIDLIIRISDRGGGIAHKDLDRVMDYHFTTAEASTQDPRINPLFGH 351 Y + V I+ D L I + D G GI + + D T P Sbjct: 58 KYCLEFVEISARQTDEHLYIVVEDDGPGIPLSKREVIFDRGQRVD---TLRP-------- 106 Query: 352 LDMHSGGQSGPMHGFGFGLPTSRAYAEYLGGSL 384 G G GL +R E G + Sbjct: 107 -------------GQGVGLAVAREITEQYEGKI 126 >4XEM-A nrPDB Length = 475 Score = 30.1 bits (66), Expect = 1.8, Method: Composition-based stats. Identities = 8/16 (50%), Positives = 9/16 (56%) Query: 368 FGLPTSRAYAEYLGGS 383 FG+P R Y Y GG Sbjct: 146 FGIPIERLYVTYFGGD 161 >2Q2E-B nrPDB Length = 621 Score = 29.7 bits (65), Expect = 2.5, Method: Composition-based stats. Identities = 25/119 (21%), Positives = 42/119 (35%), Gaps = 24/119 (20%) Query: 266 PMPLDYILPELLKNAMRATMESHLDTPYNVPDVVITIANNDID-LIIRISDRGGGIAHKD 324 P L + E + NA+ A E+ + +PD+++ + D + + I D G GI + Sbjct: 35 PRSLITTVKEAVDNALDACEEAGI-----LPDILVQVERTGPDYVTVIIEDNGPGIVREQ 89 Query: 325 LDRVMDYHFTTAEASTQDPRINPLFGHLDMHSGGQSGPMHGFGFGLPTSRAYAEYLGGS 383 + +V L H+ QS G G YA+ G Sbjct: 90 IPKVF----------------AKLLYGSRFHALKQSRGQQGIGISAAV--LYAQMTAGR 130 >1XRE-A nrPDB Length = 217 Score = 29.3 bits (64), Expect = 2.9, Method: Composition-based stats. Identities = 11/23 (47%), Positives = 17/23 (73%) Query: 313 ISDRGGGIAHKDLDRVMDYHFTT 335 +S RGGG + D+ +V+DY+F T Sbjct: 99 MSPRGGGEPNGDVAKVIDYYFNT 121 >5WMM-A nrPDB Length = 926 Score = 29.3 bits (64), Expect = 3.1, Method: Composition-based stats. Identities = 13/44 (29%), Positives = 19/44 (43%), Gaps = 5/44 (11%) Query: 156 RQLLDDHKDVVTLLAEGL-RESRKHIQDEKLVRYFLDKTLTSRL 198 L H DV A+GL + + +V+YF D SR+ Sbjct: 607 VSLRCQHADV----ADGLPVKYFDTVILNSVVQYFPDAAYLSRV 646 >5D6H-A nrPDB Length = 243 Score = 28.9 bits (63), Expect = 4.1, Method: Composition-based stats. Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 7/43 (16%) Query: 62 AAEKPSVRLTPTMMLYSGRSQDGSHLLKSGRYLQQELPVRIAH 104 A EK +RLT ++ L G+ Q S R + ELP+R++ Sbjct: 66 AGEKHMLRLTKSVNLPDGKEQ-------SYRLIVDELPIRLSD 101 >5LQS-A nrPDB Length = 305 Score = 28.9 bits (63), Expect = 4.5, Method: Composition-based stats. Identities = 19/93 (20%), Positives = 30/93 (32%), Gaps = 26/93 (27%) Query: 122 ILHVHELYIRAFQKLTDFPPIKDQADE--------------AQYCQLVRQLLD-DHKDVV 166 I+ H I Q + DF Q + + ++L+ D K +V Sbjct: 22 IILAHNFQIPELQDIADFVGDSLQLARKAMELSEKKILFLGVDFMAELVKILNPDKKVIV 81 Query: 167 T-----------LLAEGLRESRKHIQDEKLVRY 188 L E +RE R+ D +V Y Sbjct: 82 PDRSATCPMANRLTPEIIREYREKFPDAPVVLY 114 >4P7A-A nrPDB Length = 348 Score = 28.5 bits (62), Expect = 5.9, Method: Composition-based stats. Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 3/64 (4%) Query: 279 NAMRATMESHLDTPYNVPDVVITIANNDIDLIIRISDRGGGIAHKDLDRVMDYHFTTAEA 338 NA++ +E+ LD V++ +I+I D G GI +DLD V + T+ Sbjct: 31 NAIKEMIENCLDAKSTSIQVIVKEGGLK---LIQIQDNGTGIRKEDLDIVCERFTTSKLQ 87 Query: 339 STQD 342 S +D Sbjct: 88 SFED 91 >3BDK-A nrPDB Length = 386 Score = 27.8 bits (60), Expect = 8.6, Method: Composition-based stats. Identities = 17/85 (20%), Positives = 35/85 (41%), Gaps = 13/85 (15%) Query: 84 GSHLLKSGRYLQQELPVRIAHRIKGFRSLPFIIGCNPTILHV---HELYIRAFQKLTDFP 140 GSH+ S R+ ++ PV ++ +++P + G + V + +L Sbjct: 18 GSHMKMSFRWYGKKDPV----TLEEIKAIPGMQGIVTAVYDVPVGQAWPLENILEL---- 69 Query: 141 PIKDQADEAQYCQLVRQLLDDHKDV 165 K +EA V + + H+D+ Sbjct: 70 --KKMVEEAGLEITVIESIPVHEDI 92 >1UB7-A nrPDB Length = 322 Score = 27.8 bits (60), Expect = 9.3, Method: Composition-based stats. Identities = 21/100 (21%), Positives = 37/100 (37%), Gaps = 6/100 (6%) Query: 275 ELLKNAMR----ATMESHLDTPYNVPDVVITIANNDIDLIIRISDRGGGIAHKDLDRVMD 330 E+ K A+R AT+E+ D+ + + + II + G+ + + +D Sbjct: 213 EVFKFAVRVMNTATLEAIEKAGLTPEDIRLFVPHQANLRIIDAARERLGLPWERVAVNVD 272 Query: 331 YHFTTAEASTQDPRINPLFGHLDMHSGGQSGPMHGFGFGL 370 + T+ AS P G + FG GL Sbjct: 273 RYGNTSTASI--PLALKEAVDAGRIREGDHVLLVSFGAGL 310 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.310 0.130 0.353 Lambda K H 0.267 0.0402 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 16,232,748 Number of Sequences: 36641 Number of extensions: 643519 Number of successful extensions: 1590 Number of sequences better than 10.0: 37 Number of HSP's better than 10.0 without gapping: 29 Number of HSP's successfully gapped in prelim test: 29 Number of HSP's that attempted gapping in prelim test: 1509 Number of HSP's gapped (non-prelim): 58 length of query: 412 length of database: 10,336,785 effective HSP length: 99 effective length of query: 313 effective length of database: 6,709,326 effective search space: 2100019038 effective search space used: 2100019038 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.3 bits) S2: 60 (27.7 bits)