BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= O44249 (685 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 3HHS-B nrPDB 1434 0.0 3HHS-A nrPDB 677 0.0 3IXV-A nrPDB 500 e-141 1NOL-A nrPDB 482 e-136 1HC1-A nrPDB 288 5e-78 3GWJ-A nrPDB 171 1e-42 5OAR-B nrPDB 33 0.51 5W3V-B nrPDB 32 1.3 2P3X-A nrPDB 31 1.6 5ZYP-A nrPDB 31 1.8 4LOG-A nrPDB 30 2.6 6E31-A nrPDB 30 2.8 3TCA-A nrPDB 30 3.2 5ZRD-A nrPDB 30 3.8 2GL8-A nrPDB 30 4.2 3SF6-A nrPDB 30 4.9 >3HHS-B nrPDB Length = 684 Score = 1434 bits (3712), Expect = 0.0, Method: Compositional matrix adjust. Identities = 684/684 (100%), Positives = 684/684 (100%) Query: 2 TDAKNNLLYFFDRPNEPCFMQKGEDKVVFEIPDHYYPDKYKSLSNTLSNRFGNEATKRIP 61 TDAKNNLLYFFDRPNEPCFMQKGEDKVVFEIPDHYYPDKYKSLSNTLSNRFGNEATKRIP Sbjct: 1 TDAKNNLLYFFDRPNEPCFMQKGEDKVVFEIPDHYYPDKYKSLSNTLSNRFGNEATKRIP 60 Query: 62 IRNITLPNLEVPMQLPYNDQFSLFVPKHRTMAAKLIDIFMGMRDVEDLQSVCSYCQLRIN 121 IRNITLPNLEVPMQLPYNDQFSLFVPKHRTMAAKLIDIFMGMRDVEDLQSVCSYCQLRIN Sbjct: 61 IRNITLPNLEVPMQLPYNDQFSLFVPKHRTMAAKLIDIFMGMRDVEDLQSVCSYCQLRIN 120 Query: 122 PYMFNYCLSVAILHRPDTKGLSIPTFAETFPDKFMDSKVFLRAREVSNVVISGSRMPVNV 181 PYMFNYCLSVAILHRPDTKGLSIPTFAETFPDKFMDSKVFLRAREVSNVVISGSRMPVNV Sbjct: 121 PYMFNYCLSVAILHRPDTKGLSIPTFAETFPDKFMDSKVFLRAREVSNVVISGSRMPVNV 180 Query: 182 PINYTANTTEPEQRVAYFREDIGINLHHWHWHLVYPFDSADRSIVNKDRRGELFYYMHQQ 241 PINYTANTTEPEQRVAYFREDIGINLHHWHWHLVYPFDSADRSIVNKDRRGELFYYMHQQ Sbjct: 181 PINYTANTTEPEQRVAYFREDIGINLHHWHWHLVYPFDSADRSIVNKDRRGELFYYMHQQ 240 Query: 242 IIGRYNVERMCNGLPQVKPFSDFSAPIEEGYFPKLDSQVASRTWPPRFAGSVFRNLDRTV 301 IIGRYNVERMCNGLPQVKPFSDFSAPIEEGYFPKLDSQVASRTWPPRFAGSVFRNLDRTV Sbjct: 241 IIGRYNVERMCNGLPQVKPFSDFSAPIEEGYFPKLDSQVASRTWPPRFAGSVFRNLDRTV 300 Query: 302 DQVKIDVRKLFTWRDQFLEAIQKMAIKMPNGRELPLDEVTGIDMLGNLMESSIISPNRGY 361 DQVKIDVRKLFTWRDQFLEAIQKMAIKMPNGRELPLDEVTGIDMLGNLMESSIISPNRGY Sbjct: 301 DQVKIDVRKLFTWRDQFLEAIQKMAIKMPNGRELPLDEVTGIDMLGNLMESSIISPNRGY 360 Query: 362 YGDLHNMGHVFAAYTHDPDHRHLEQFGVMGDSATAMRDPFFYRWHRFVDDVFNIYKEKLT 421 YGDLHNMGHVFAAYTHDPDHRHLEQFGVMGDSATAMRDPFFYRWHRFVDDVFNIYKEKLT Sbjct: 361 YGDLHNMGHVFAAYTHDPDHRHLEQFGVMGDSATAMRDPFFYRWHRFVDDVFNIYKEKLT 420 Query: 422 PYTNERLDFPGVRVSSVGIEGARPNTLRTLWQQSTVELGRGLDFTPRGSVLARFTHLQHD 481 PYTNERLDFPGVRVSSVGIEGARPNTLRTLWQQSTVELGRGLDFTPRGSVLARFTHLQHD Sbjct: 421 PYTNERLDFPGVRVSSVGIEGARPNTLRTLWQQSTVELGRGLDFTPRGSVLARFTHLQHD 480 Query: 482 EFQYVIEVNNTTGGNLMGTVRIFMAPKVDDNGQPMSFNKQRRLMIELDKFSQALRPGTNT 541 EFQYVIEVNNTTGGNLMGTVRIFMAPKVDDNGQPMSFNKQRRLMIELDKFSQALRPGTNT Sbjct: 481 EFQYVIEVNNTTGGNLMGTVRIFMAPKVDDNGQPMSFNKQRRLMIELDKFSQALRPGTNT 540 Query: 542 IRRRSVDSSVTIPYERTFRNQSERPGDPGTAGAAEFDFCGCGWPHHMLIPKGTAQGYPVV 601 IRRRSVDSSVTIPYERTFRNQSERPGDPGTAGAAEFDFCGCGWPHHMLIPKGTAQGYPVV Sbjct: 541 IRRRSVDSSVTIPYERTFRNQSERPGDPGTAGAAEFDFCGCGWPHHMLIPKGTAQGYPVV 600 Query: 602 LFVMISNWNNDRIEQDLVGSCNDAASYCGIRDRKYPDKQAMGYPFDRKMANDAATLSDFL 661 LFVMISNWNNDRIEQDLVGSCNDAASYCGIRDRKYPDKQAMGYPFDRKMANDAATLSDFL Sbjct: 601 LFVMISNWNNDRIEQDLVGSCNDAASYCGIRDRKYPDKQAMGYPFDRKMANDAATLSDFL 660 Query: 662 RPNMAVRDCSIQFSDTTVERGQQG 685 RPNMAVRDCSIQFSDTTVERGQQG Sbjct: 661 RPNMAVRDCSIQFSDTTVERGQQG 684 >3HHS-A nrPDB Length = 694 Score = 677 bits (1748), Expect = 0.0, Method: Compositional matrix adjust. Identities = 333/682 (48%), Positives = 459/682 (67%), Gaps = 20/682 (2%) Query: 11 FFDRPNEPCFMQKGEDKVVFEIPDHYYPDKYKSLSNTLSNRFGNE--ATKRIPIRNI-TL 67 +DRP EP KGEDKV+FE+ + + +Y + L+NRFG+E +++I ++N+ + Sbjct: 10 LYDRPGEPMINTKGEDKVLFELTEQFLTPEYANNGLELNNRFGDEEEVSRKIILKNLDKI 69 Query: 68 PNLEVPMQLPYNDQFSLFVPKHRTMAAKLIDIFMGMRD--VEDLQSVCSYCQLRINPYMF 125 P QLP + FSLF+P H+ MA ++ID+ M + + +++L S C Y ++ +NP +F Sbjct: 70 PEFPKAKQLPNDADFSLFLPSHQEMANEVIDVLMSVTENQLQELLSTCVYARINLNPQLF 129 Query: 126 NYCLSVAILHRPDTKGLSIPTFAETFPDKFMDSKVFLRAREVSNVV-ISGSRMPVNVPIN 184 NYC +VAI+HR DT + + +AE FP KF+DS+VF +ARE + V+ + R P+ +P + Sbjct: 130 NYCYTVAIMHRRDTGKVRVQNYAEIFPAKFLDSQVFTQAREAAAVIPKTIPRTPIIIPRD 189 Query: 185 YTANTTEPEQRVAYFREDIGINLHHWHWHLVYPFDSADRSIVNKDRRGELFYYMHQQIIG 244 YTA E E R+AY+RED+GINLHHWHWHLVYPF ++D IV KDRRGELF+YMHQQII Sbjct: 190 YTATDLEEEHRLAYWREDLGINLHHWHWHLVYPFSASDEKIVAKDRRGELFFYMHQQIIA 249 Query: 245 RYNVERMCNGLPQVKPFSDFSAPIEEGYFPKLDSQVASRTWPPRFAGSVFRNLDRTVDQV 304 RYN ER+CN L +VK FSD+ PI E Y+PKLDS ++R WPPR AG +++L R VD + Sbjct: 250 RYNCERLCNSLKRVKKFSDWREPIPEAYYPKLDSLTSARGWPPRQAGMRWQDLKRPVDGL 309 Query: 305 KIDVRKLFTWRDQFLEAIQKMAIKMPNGRELPLDEVTGIDMLGNLMESSIISPNRGYYGD 364 + + + +R EAI + +P+ LD IDMLGN+ME+S++SPNR YG Sbjct: 310 NVTIDDMERYRRNIEEAIATGNVILPDKSTKKLD----IDMLGNMMEASVLSPNRDLYGS 365 Query: 365 LHNMGHVFAAYTHDPDHRHLEQFGVMGDSATAMRDPFFYRWHRFVDDVFNIYKE---KLT 421 +HN H F+AY HDP+HR+LE FGV+ D AT MRDPFFYR H +VDD+F +KE + Sbjct: 366 IHNNMHSFSAYMHDPEHRYLESFGVIADEATTMRDPFFYRVHAWVDDIFQSFKEAPHNVR 425 Query: 422 PYTNERLDFPGVRVSSVGIE--GARPNTLRTLWQQSTVELGRGLDFTPRGSVLARFTHLQ 479 PY+ +L+ PGV+V+SV +E G + N L T W QS V L +GLDF+ RG V ARFTHL Sbjct: 426 PYSRSQLENPGVQVTSVAVESAGGQQNVLNTFWMQSDVNLSKGLDFSDRGPVYARFTHLN 485 Query: 480 HDEFQYVIEVNNTTGGNLMGTVRIFMAPKVDDNGQPMSFNKQRRLMIELDKFSQALRPGT 539 H F+YVI+ NNT TVRIF+APK D+ P + + QR++ IE+D+F L G Sbjct: 486 HRPFRYVIKANNTASAR-RTTVRIFIAPKTDERNLPWALSDQRKMFIEMDRFVVPLSAGE 544 Query: 540 NTIRRRSVDSSVTIPYERTFRNQSERPGDPGTAGAAEFDFCGCGWPHHMLIPKGTAQGYP 599 NTI R+S +SS+TIP+E+TFR+ S + DP + A F++CGCGWP HML+PKGT G Sbjct: 545 NTITRQSTESSLTIPFEQTFRDLSIQGSDPRRSELAAFNYCGCGWPQHMLVPKGTVGGVA 604 Query: 600 VVLFVMISNWNNDRIEQ--DLVGSCNDAASYCGIRDRKYPDKQAMGYPFDRKMANDAATL 657 LFVM+SN+ D+IEQ SC +A+ +CG++D+KYPD + MGYPFDR +N A + Sbjct: 605 YQLFVMLSNYELDKIEQPDGRELSCVEASMFCGLKDKKYPDARPMGYPFDRP-SNSATNI 663 Query: 658 SDF-LRPNMAVRDCSIQFSDTT 678 DF NM ++D I+ SD T Sbjct: 664 EDFSAMSNMGLQDIVIKLSDVT 685 >3IXV-A nrPDB Length = 626 Score = 500 bits (1287), Expect = e-141, Method: Compositional matrix adjust. Identities = 262/605 (43%), Positives = 363/605 (60%), Gaps = 25/605 (4%) Query: 76 LPYNDQFSLFVPKHRTMAAKLIDIFMGMRDVEDLQSVCSYCQLRINPYMFNYCLSVAILH 135 LP FS F +H A +L G +D D +C + +N MF Y +SVA+LH Sbjct: 39 LPRGTLFSCFHARHLAEATELYVALYGAKDFNDFIHLCEQARQIVNEGMFVYAVSVAVLH 98 Query: 136 RPDTKGLSIPTFAETFPDKFMDSKVFLRA-REVSNVVISGSRMPVNVPINYTANTTEPEQ 194 R D KG+++P E FPD+F+ ++ RA +E SN + + V T N +PE Sbjct: 99 REDCKGITVPPIQEVFPDRFVPAETINRANKEASN---HPDQQSIVVEAEETGNILDPEY 155 Query: 195 RVAYFREDIGINLHHWHWHLVYPFDSADRSIV--NKDRRGELFYYMHQQIIGRYNVERMC 252 +++YFREDIGIN HHWHWH+VYP + + +++ KDR+GELF+YMHQQ+ RY+ ER+ Sbjct: 156 KLSYFREDIGINAHHWHWHIVYPA-TWNPTVMGKEKDRKGELFFYMHQQMCARYDSERLS 214 Query: 253 NGLPQVKPFSDFSAPIEEGYFPKLDSQVASRTWPPRFAGSVFRNLDRTVDQVKIDVRKLF 312 NGL ++ PF +F P+E GY P L S V+ + R G +L +DV+ + Sbjct: 215 NGLQRMIPFHNFDEPLE-GYAPHLTSLVSGLQYASRPEGYSIHDLS------DVDVQDMV 267 Query: 313 TWRDQFLEAIQKMAIKMPNGRELPLDEVTGIDMLGNLMESSIISPNRGYYGDLHNMGHVF 372 WR++ L+AI I + ++PLD G D+LG+++ESS S N YYG LHN GHV Sbjct: 268 RWRERILDAINMHYIVDKDNNKIPLDIEHGTDILGDIIESSDESKNVEYYGSLHNWGHVM 327 Query: 373 AAYTHDPDHRHLEQFGVMGDSATAMRDPFFYRWHRFVDDVFNIYKEKLTPYTNERLDFPG 432 A DPDHR E GVM D++T++RDP FYRWHRF+D++F +K+ PYT E L FPG Sbjct: 328 MANITDPDHRFQENPGVMSDTSTSLRDPIFYRWHRFIDNIFQEHKKSFHPYTKEELSFPG 387 Query: 433 VRVSSVGIEGARPNTLRTLWQQSTVELGRGLDFTPRGSVLARFTHLQHDEFQYVIEVNNT 492 V V V I N + TL ++S +EL G++F SV ++ HL H+ F Y I V N Sbjct: 388 VEVVGVSINSKTANVITTLIKESLLELSHGINFGTDQSVKVKYHHLDHEPFTYNIVVENN 447 Query: 493 TGGNLMGTVRIFMAPKVDDNGQPMSFNKQRRLMIELDKFSQALRPGTNTIRRRSVDSSVT 552 +G TVRIF+APK D+ + ++QRRL IELDKF L PG NTI R DSSVT Sbjct: 448 SGAEKHSTVRIFLAPKYDELNNKLEPDEQRRLFIELDKFFYTLTPGKNTIVRNHQDSSVT 507 Query: 553 IPYERTFRNQSERPGDPGTAGAAEFDFCGCGWPHHMLIPKGTAQGYPVVLFVMISNWNND 612 I RTF ++ G ++C CGWP HMLIP+G+ +G LFVM+++ + D Sbjct: 508 ISKVRTF----DQLGAGEGVSEDSTEYCSCGWPEHMLIPRGSHKGMEFELFVMLTDHDED 563 Query: 613 RI---EQDLVGSCNDAASYCGIRDRKYPDKQAMGYPFDRKMANDAATLSDFLRPNMAVRD 669 + ++ V C+DA SYCG RD +YPDK+AMG+PFDRK+ +A T ++FL PNM + D Sbjct: 564 TVAGLSENAV--CSDAVSYCGARDDRYPDKKAMGFPFDRKI--EARTAAEFLTPNMGLTD 619 Query: 670 CSIQF 674 I+F Sbjct: 620 IKIKF 624 >1NOL-A nrPDB Length = 628 Score = 482 bits (1240), Expect = e-136, Method: Compositional matrix adjust. Identities = 242/596 (40%), Positives = 351/596 (58%), Gaps = 14/596 (2%) Query: 82 FSLFVPKHRTMAAKLIDIFMGMRDVEDLQSVCSYCQLRINPYMFNYCLSVAILHRPDTKG 141 FS F P H A L ++F D D + + +N +F + VA+LHR D KG Sbjct: 46 FSCFHPDHLEEARHLYEVFWEAGDFNDFIEIAKEARTFVNEGLFAFAAEVAVLHRDDCKG 105 Query: 142 LSIPTFAETFPDKFMDSKVFLRAREVSNVVISGSRMPVNVPINYTANTTEPEQRVAYFRE 201 L +P E FPDKF+ S A + ++V P+ V + T N +PE R+AY+RE Sbjct: 106 LYVPPVQEIFPDKFIPSAAINEAFKKAHVRPEFDESPILVDVQDTGNILDPEYRLAYYRE 165 Query: 202 DIGINLHHWHWHLVYPFDSADRSI-VNKDRRGELFYYMHQQIIGRYNVERMCNGLPQVKP 260 D+GIN HHWHWHLVYP + KDR+GELFYYMHQQ+ RY+ ER+ NG+ ++ P Sbjct: 166 DVGINAHHWHWHLVYPSTWNPKYFGKKKDRKGELFYYMHQQMCARYDCERLSNGMHRMLP 225 Query: 261 FSDFSAPIEEGYFPKLDSQVASRTWPPRFAGSVFRNLDRTVDQVKIDVRKLFTWRDQFLE 320 F++F P+ GY P L + + + PR G R+L I++ ++ R++ L+ Sbjct: 226 FNNFDEPLA-GYAPHLTHVASGKYYSPRPDGLKLRDLG------DIEISEMVRMRERILD 278 Query: 321 AIQKMAIKMPNGRELPLDEVTGIDMLGNLMESSIISPNRGYYGDLHNMGHVFAAYTHDPD 380 +I + +G LDE+ G D+LG L+ESS S N YYG+LHN GHV A HDPD Sbjct: 279 SIHLGYVISEDGSHKTLDELHGTDILGALVESSYESVNHEYYGNLHNWGHVTMARIHDPD 338 Query: 381 HRHLEQFGVMGDSATAMRDPFFYRWHRFVDDVFNIYKEKLTPYTNERLDFPGVRVSSVGI 440 R E+ GVM D++T++RDP FY WHRF+D++F+ YK L PY ++ L+FP ++V V + Sbjct: 339 GRFHEEPGVMSDTSTSLRDPIFYNWHRFIDNIFHEYKNTLKPYDHDVLNFPDIQVQDVTL 398 Query: 441 EGARPNTLRTLWQQSTVELGRGLDFTPRGSVLARFTHLQHDEFQYVIEVNNTTGGNLMGT 500 N + T ++ +EL G++ S+ AR+ HL H+ F Y + V N + + T Sbjct: 399 HARVDNVVHTFMREQELELKHGINPGNARSIKARYYHLDHEPFSYAVNVQNNSASDKHAT 458 Query: 501 VRIFMAPKVDDNGQPMSFNKQRRLMIELDKFSQALRPGTNTIRRRSVDSSVTIPYERTFR 560 VRIF+APK D+ G + ++ RR IELDKF L PG NT+ R S+DSSVT+ ++ TF Sbjct: 459 VRIFLAPKYDELGNEIKADELRRTAIELDKFKTDLHPGKNTVVRHSLDSSVTLSHQPTFE 518 Query: 561 NQSERPGDPGTAGAAEFDFCGCGWPHHMLIPKGTAQGYPVVLFVMISNWNNDRIEQDLVG 620 + G + ++C CGWP H+L+PKG +G LFVM+++W+ D+++ Sbjct: 519 DLLHGVG----LNEHKSEYCSCGWPSHLLVPKGNIKGMEYHLFVMLTDWDKDKVDGSESV 574 Query: 621 SCNDAASYCGIRDRKYPDKQAMGYPFDRKMANDAATLSDFLRPNMAVRDCSIQFSD 676 +C DA SYCG RD KYPDK+ MG+PFDR + + +SDFL NM ++D I+F + Sbjct: 575 ACVDAVSYCGARDHKYPDKKPMGFPFDRPIHTEH--ISDFLTNNMFIKDIKIKFHE 628 >1HC1-A nrPDB Length = 657 Score = 288 bits (737), Expect = 5e-78, Method: Compositional matrix adjust. Identities = 181/576 (31%), Positives = 285/576 (49%), Gaps = 18/576 (3%) Query: 82 FSLFVPKHRTMAAKLIDIFMGMRDVEDLQSVCSYCQLRINPYMFNYCLSVAILHRPDTKG 141 +SLF + R A L + ++ +S +Y + R+N F Y L V+++H G Sbjct: 72 YSLFNTRQRKEALMLFAVLNQCKEWYCFRSNAAYFRERMNEGEFVYALYVSVIHSKLGDG 131 Query: 142 LSIPTFAETFPDKFMDSKVFLRAREVSNVVISGSRMPVNVPINYTANTTEPEQRVAYFRE 201 + +P + P F +S+V +A ++ P +++T EQRVAYF E Sbjct: 132 IVLPPLYQITPHMFTNSEVIDKAYSAKM-----TQKPGTFNVSFTGTKKNREQRVAYFGE 186 Query: 202 DIGINLHHWHWHLVYPFDSADRSIVNKDRRGELFYYMHQQIIGRYNVERMCNGLPQVKPF 261 DIG+N+HH WH+ +PF D + DR+GELF+++H Q+ R++ ER+ N L V Sbjct: 187 DIGMNIHHVTWHMDFPFWWEDSYGYHLDRKGELFFWVHHQLTARFDFERLSNWLDPVDEL 246 Query: 262 SDFSAPIEEGYFPKLDSQVASRTWPPRFAGSVFRNLDRTVDQVKIDVRKLFTWRDQFLEA 321 + I EG+ P L S +P R F ++D V L + EA Sbjct: 247 H-WDRIIREGFAP-LTSYKYGGEFPVRPDNIHFEDVDGVAH-----VHDLEITESRIHEA 299 Query: 322 IQKMAIKMPNGRELPLDEVTGIDMLGNLMESSIISPNRGYYGDLHNMGHVFAAYTHDPDH 381 I I +G + + + GI++LG+++ESS S N YYG LHN HV DP Sbjct: 300 IDHGYITDSDGHTIDIRQPKGIELLGDIIESSKYSSNVQYYGSLHNTAHVMLGRQGDPHG 359 Query: 382 RHLEQFGVMGDSATAMRDPFFYRWHRFVDDVFNIYKEKLTPYTNERLDFPGVRVSSVGIE 441 + GVM TA RDP F+R H+++D++F + + PYT++ L+F G+ V+ V I+ Sbjct: 360 KFNLPPGVMEHFETATRDPSFFRLHKYMDNIFKKHTDSFPPYTHDNLEFSGMVVNGVAID 419 Query: 442 GARPNTLRTLWQQSTVELGRGLDFTPRGSVLARFTHLQHDEFQYVIEVNNTTGGNLMGTV 501 G T +Q S + + + AR L H+EF Y I ++N G + T Sbjct: 420 GELI-TFFDEFQYSLINAVDSGENIEDVEINARVHRLNHNEFTYKITMSNNNDGERLATF 478 Query: 502 RIFMAPKVDDNGQPMSFNKQRRLMIELDKFSQALRPGTNTIRRRSVDSSVTIPYERTFRN 561 RIF+ P D+NG ++ ++ R IELDKF Q + G TI R S DSSVT+P +F++ Sbjct: 479 RIFLCPIEDNNGITLTLDEARWFCIELDKFFQKVPSGPETIERSSKDSSVTVPDMPSFQS 538 Query: 562 QSERPGDPGTAGAAEFDFCG----CGWPHHMLIPKGTAQGYPVVLFVMISNWNNDRIEQD 617 E+ D G + D CG P ML+PK +G L+V +++ + D + Sbjct: 539 LKEQ-ADNAVNGGHDLDLSAYERSCGIPDRMLLPKSKPEGMEFNLYVAVTDGDKDTEGHN 597 Query: 618 LVGSCNDAASYCGIRDRKYPDKQAMGYPFDRKMAND 653 + CG+ YPD + +GYP +R++ ++ Sbjct: 598 GGHDYGGTHAQCGVHGEAYPDNRPLGYPLERRIPDE 633 >3GWJ-A nrPDB Length = 674 Score = 171 bits (432), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 156/631 (24%), Positives = 282/631 (44%), Gaps = 78/631 (12%) Query: 76 LPYNDQFSLFVPKHRTMAAKLIDIFMGMRDVEDLQSVCSYCQLRINPYMFNYCLSVAILH 135 LP ++FS+F K R A L +F +D + ++ ++ +N F Y +AI+ Sbjct: 69 LPKYNEFSVFHDKLRDEAIALFHLFYYAKDFDTFYKSAAFARVHLNQGQFLYAYYIAIIQ 128 Query: 136 RPDTKGLSIPTFAETFPDKF--MDSKVFLRAREVSNVVISGSRMPVNVPI---------- 183 R DT G+ +P E +P+ F +D+ + ++ N +I+ V I Sbjct: 129 RKDTYGIVLPAPYEIYPELFVNIDTTYKMFRTKMQNGLIN-PEAAVEYGIVKEDNHYVYY 187 Query: 184 -NYTANTT--EPEQRVAYFREDIGINLHHWHWHLVYPF-DSADRSIVNKDRRGELFYYMH 239 NY+ T EQR+AYF EDIG+N +++ +H+ PF +A++ K+RRGE+++Y + Sbjct: 188 SNYSNAITYYNEEQRLAYFTEDIGLNAYYFFFHIHLPFWWTAEKYGNLKERRGEMYHYFY 247 Query: 240 QQIIGRYNVERMCNGLPQVKPFSDFSAPIEEGYFPKLDSQVASRTWPPRFAGSVFRNLDR 299 Q++ RY ER+ NGL + FS +S P++ G++P L S + P F N+ Sbjct: 248 DQLLTRYYFERLTNGLGTIPEFSWYS-PVKTGHYPLLTSYYTPFSQRPNFY-----NVHS 301 Query: 300 TVDQVKIDVRKLFTWRDQFLEAIQKMAIKMPNGRELPLDEVTGIDMLGNLMESSIISPNR 359 + KI R L + + F++A+QK + G+ + L++ +GN + + Sbjct: 302 EENYEKI--RFLDAYENYFVQALQKGVFE-GFGQTIYLNDSKANSFVGNYWQDNADLYGE 358 Query: 360 GYYGDLHNMGHVFAAYTHDPDHRHLEQFGVMGDS----ATAMRDPFFYRWHRFVDDVFNI 415 D + A + +++ M + T++RDP FY+ + + FN Sbjct: 359 EVTKDYQRSYEIVARQVLGAAPKPFDKYTFMPSALDFYQTSLRDPTFYQLYNRIIGYFNQ 418 Query: 416 YKEKLTPYTNERLDFPGVRVSSVGIEGARPNTLRTLWQQSTVELGRGLDFTPRGSVLARF 475 +K+ L P++ E+L F V + + L T ++ + + F + ++ Sbjct: 419 FKQYLEPHSQEKLHF-----VGVKVNNVVVDKLVTFFEYYDFDATNTV-FLTEEELKTKY 472 Query: 476 TH--------LQHDEFQYVIEVNNTTGGNLMGTVRIFMAPKVDDNGQPMSFNKQRRLMIE 527 H L H F I++ + V+IFM PK ++NG P++ E Sbjct: 473 PHNLKVRQPRLNHQPFNINIDIKADVATD--AVVKIFMGPKYNENGFPITLENDWMKFFE 530 Query: 528 LDKFSQALRPGTNTIRRRSVDSSV----TIPYERTFRNQSERPGDPGTAGAAEFDFC-GC 582 +D F+ + PG NTI R S + + ++P ++ + G FD Sbjct: 531 MDWFTHKITPGQNTIVRNSNEFVIFKEDSLPSTELYKLLEK--------GKVPFDMSEDF 582 Query: 583 GW-PHHMLIPKGTAQGYPVVLFVMISNWNNDRIEQDLVGSCNDAASYCGIRDRKYPDKQA 641 G+ P +++P+GT G+P V + + + + Y ++ D + Sbjct: 583 GYLPKRLMLPRGTKGGFPFQFVVFVYPFE---------STTKNLTPY----EKFMIDNKP 629 Query: 642 MGYPFDRKMANDAATLSDFLRPNMAVRDCSI 672 +GYPFDR + S F +PN+ RD S+ Sbjct: 630 LGYPFDRPVDT-----SCFKQPNIFFRDVSV 655 >5OAR-B nrPDB Length = 499 Score = 32.7 bits (73), Expect = 0.51, Method: Compositional matrix adjust. Identities = 22/79 (27%), Positives = 36/79 (45%), Gaps = 5/79 (6%) Query: 123 YMFNYCLSVAILHRPDTKGLSIPTFAETFPDKFMDSKVFLRAREVSNVVISGSRMPVNVP 182 Y +++ L++ G + P + E D + S + RA ++ +V SG+R Sbjct: 392 YDYDFTLNLTETQAKHIIGATAPLWGEQVDDINVSSMFWPRAAALAELVWSGNR-----D 446 Query: 183 INYTANTTEPEQRVAYFRE 201 N TTE QR+ FRE Sbjct: 447 ANGNKRTTEMTQRILNFRE 465 >5W3V-B nrPDB Length = 215 Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust. Identities = 18/38 (47%), Positives = 24/38 (63%), Gaps = 1/38 (2%) Query: 511 DNGQPMSFNKQRRLMIELDKFSQALRPGTNTIRRRSVD 548 D+ +P SFN +L ELDK SQA++ I+ RSVD Sbjct: 152 DHKEPPSFNPSEKLK-ELDKNSQAIKRRLERIKSRSVD 188 >2P3X-A nrPDB Length = 339 Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust. Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 7/52 (13%) Query: 366 HNMGHVFAAYTHDPDHRHLEQFGVMGDSATAMRDPFFYRWHRFVDDVFNIYK 417 HN+ H + P MG+ TA RDP F+ H VD ++NI+K Sbjct: 239 HNIVHKWTGLADKPSED-------MGNFYTAGRDPIFFGHHANVDRMWNIWK 283 >5ZYP-A nrPDB Length = 390 Score = 30.8 bits (68), Expect = 1.8, Method: Compositional matrix adjust. Identities = 24/101 (23%), Positives = 39/101 (38%), Gaps = 12/101 (11%) Query: 288 RFAGSVFRNLDRTVDQVKIDVRKLFTWRDQFLEAIQKMAIKMPNGR----ELPLDEVTGI 343 A VF+N +R + TW L Q ++++ EL L + G Sbjct: 80 EMALDVFQNSERA------SLHTFLTWAHLNLAKGQSLSVETKEHELTQAELNLKDAIGF 133 Query: 344 D--MLGNLMESSIISPNRGYYGDLHNMGHVFAAYTHDPDHR 382 D +GN++ + + RG+Y +F H DHR Sbjct: 134 DPTWIGNMLATVELYYQRGHYDKALETSDLFVKSIHAEDHR 174 >4LOG-A nrPDB Length = 574 Score = 30.4 bits (67), Expect = 2.6, Method: Compositional matrix adjust. Identities = 12/45 (26%), Positives = 24/45 (53%), Gaps = 1/45 (2%) Query: 110 QSVCSYCQLRINPYMFNYCLSVAILHRPDTKGLSIPTFAETFPDK 154 +++ + L ++P F C+ +L +P+T+GL P E D+ Sbjct: 463 ETISRFRALAVDPTEFA-CMKALVLFKPETRGLKDPEHVEALQDQ 506 >6E31-A nrPDB Length = 359 Score = 30.4 bits (67), Expect = 2.8, Method: Compositional matrix adjust. Identities = 26/113 (23%), Positives = 46/113 (40%), Gaps = 19/113 (16%) Query: 13 DRPNEPCFMQKGEDKVVFEIPDHYYPDKYKSLSNTLSNRFGNEATKRIPIR------NIT 66 D N+ F++K E VF+ P ++Y D N +N N K + +I Sbjct: 175 DTENKVLFLEKEERYAVFKNPQNFYLDNKGKKENKETNEKMNAKNKEYLLEESFCGTSII 234 Query: 67 LPNLEVPMQLPYNDQFS-------------LFVPKHRTMAAKLIDIFMGMRDV 106 +P LE + L + + S +VPK +T ++ + F+ +V Sbjct: 235 VPELEGALYLKEDGKKSWKRRYFLLRASGIYYVPKGKTKTSRDLACFIQFENV 287 >3TCA-A nrPDB Length = 291 Score = 30.0 bits (66), Expect = 3.2, Method: Compositional matrix adjust. Identities = 26/113 (23%), Positives = 46/113 (40%), Gaps = 19/113 (16%) Query: 13 DRPNEPCFMQKGEDKVVFEIPDHYYPDKYKSLSNTLSNRFGNEATKRIPIR------NIT 66 D N+ F++K E VF+ P ++Y D N +N N K + +I Sbjct: 107 DTENKVLFLEKEERYAVFKNPQNFYLDNKGKKENKETNEKMNAKNKEYLLEESFCGTSII 166 Query: 67 LPNLEVPMQLPYNDQFS-------------LFVPKHRTMAAKLIDIFMGMRDV 106 +P LE + L + + S +VPK +T ++ + F+ +V Sbjct: 167 VPELEGALYLKEDGKKSWKRRYFLLRASGIYYVPKGKTKTSRDLACFIQFENV 219 >5ZRD-A nrPDB Length = 549 Score = 30.0 bits (66), Expect = 3.8, Method: Compositional matrix adjust. Identities = 21/53 (39%), Positives = 31/53 (58%), Gaps = 6/53 (11%) Query: 388 GVMGDSATAMRDPFFYRWHRFVDDVFNIYKEKLTPYTNERLD----FPGVRVS 436 G MG++ TA DP F+ H VD +F ++ +K T +T +RLD +PG S Sbjct: 302 GDMGENNTAGMDPIFFFHHCNVDRMFWVW-QKQTGHT-DRLDIIRNYPGTNAS 352 >2GL8-A nrPDB Length = 241 Score = 29.6 bits (65), Expect = 4.2, Method: Compositional matrix adjust. Identities = 13/27 (48%), Positives = 16/27 (59%) Query: 128 CLSVAILHRPDTKGLSIPTFAETFPDK 154 CL +L PD KGLS P+ ET +K Sbjct: 148 CLRAIVLFNPDAKGLSNPSEVETLREK 174 >3SF6-A nrPDB Length = 403 Score = 29.6 bits (65), Expect = 4.9, Method: Compositional matrix adjust. Identities = 14/39 (35%), Positives = 21/39 (53%) Query: 140 KGLSIPTFAETFPDKFMDSKVFLRAREVSNVVISGSRMP 178 +G +PT F + SK+ LRA S +V+ G R+P Sbjct: 202 RGFVVPTDTPGFTANTIKSKMSLRASVTSELVLDGVRLP 240 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 3HHS-B nrPDB 1062 0.0 3HHS-A nrPDB 931 0.0 1NOL-A nrPDB 851 0.0 3IXV-A nrPDB 848 0.0 1HC1-A nrPDB 749 0.0 3GWJ-A nrPDB 610 e-175 Sequences not found previously or not previously below threshold: 6HQJ-A nrPDB 43 6e-04 6ELS-A nrPDB 38 0.015 4PO6-A nrPDB 34 0.18 4Z13-A nrPDB 33 0.38 3AIW-A nrPDB 33 0.46 2P3X-A nrPDB 33 0.52 4Z0Z-A nrPDB 32 0.69 6GGJ-A nrPDB 32 1.3 5DDZ-A nrPDB 30 2.5 5SV3-B nrPDB 30 2.9 5E2H-A nrPDB 30 3.3 3I4X-A nrPDB 29 5.5 4QLO-A nrPDB 29 5.7 4V6U-AE nrPDB 29 5.9 6EKK-A nrPDB 29 6.8 5CE9-A nrPDB 29 6.9 >3HHS-B nrPDB Length = 684 Score = 1062 bits (2745), Expect = 0.0, Method: Composition-based stats. Identities = 684/684 (100%), Positives = 684/684 (100%) Query: 2 TDAKNNLLYFFDRPNEPCFMQKGEDKVVFEIPDHYYPDKYKSLSNTLSNRFGNEATKRIP 61 TDAKNNLLYFFDRPNEPCFMQKGEDKVVFEIPDHYYPDKYKSLSNTLSNRFGNEATKRIP Sbjct: 1 TDAKNNLLYFFDRPNEPCFMQKGEDKVVFEIPDHYYPDKYKSLSNTLSNRFGNEATKRIP 60 Query: 62 IRNITLPNLEVPMQLPYNDQFSLFVPKHRTMAAKLIDIFMGMRDVEDLQSVCSYCQLRIN 121 IRNITLPNLEVPMQLPYNDQFSLFVPKHRTMAAKLIDIFMGMRDVEDLQSVCSYCQLRIN Sbjct: 61 IRNITLPNLEVPMQLPYNDQFSLFVPKHRTMAAKLIDIFMGMRDVEDLQSVCSYCQLRIN 120 Query: 122 PYMFNYCLSVAILHRPDTKGLSIPTFAETFPDKFMDSKVFLRAREVSNVVISGSRMPVNV 181 PYMFNYCLSVAILHRPDTKGLSIPTFAETFPDKFMDSKVFLRAREVSNVVISGSRMPVNV Sbjct: 121 PYMFNYCLSVAILHRPDTKGLSIPTFAETFPDKFMDSKVFLRAREVSNVVISGSRMPVNV 180 Query: 182 PINYTANTTEPEQRVAYFREDIGINLHHWHWHLVYPFDSADRSIVNKDRRGELFYYMHQQ 241 PINYTANTTEPEQRVAYFREDIGINLHHWHWHLVYPFDSADRSIVNKDRRGELFYYMHQQ Sbjct: 181 PINYTANTTEPEQRVAYFREDIGINLHHWHWHLVYPFDSADRSIVNKDRRGELFYYMHQQ 240 Query: 242 IIGRYNVERMCNGLPQVKPFSDFSAPIEEGYFPKLDSQVASRTWPPRFAGSVFRNLDRTV 301 IIGRYNVERMCNGLPQVKPFSDFSAPIEEGYFPKLDSQVASRTWPPRFAGSVFRNLDRTV Sbjct: 241 IIGRYNVERMCNGLPQVKPFSDFSAPIEEGYFPKLDSQVASRTWPPRFAGSVFRNLDRTV 300 Query: 302 DQVKIDVRKLFTWRDQFLEAIQKMAIKMPNGRELPLDEVTGIDMLGNLMESSIISPNRGY 361 DQVKIDVRKLFTWRDQFLEAIQKMAIKMPNGRELPLDEVTGIDMLGNLMESSIISPNRGY Sbjct: 301 DQVKIDVRKLFTWRDQFLEAIQKMAIKMPNGRELPLDEVTGIDMLGNLMESSIISPNRGY 360 Query: 362 YGDLHNMGHVFAAYTHDPDHRHLEQFGVMGDSATAMRDPFFYRWHRFVDDVFNIYKEKLT 421 YGDLHNMGHVFAAYTHDPDHRHLEQFGVMGDSATAMRDPFFYRWHRFVDDVFNIYKEKLT Sbjct: 361 YGDLHNMGHVFAAYTHDPDHRHLEQFGVMGDSATAMRDPFFYRWHRFVDDVFNIYKEKLT 420 Query: 422 PYTNERLDFPGVRVSSVGIEGARPNTLRTLWQQSTVELGRGLDFTPRGSVLARFTHLQHD 481 PYTNERLDFPGVRVSSVGIEGARPNTLRTLWQQSTVELGRGLDFTPRGSVLARFTHLQHD Sbjct: 421 PYTNERLDFPGVRVSSVGIEGARPNTLRTLWQQSTVELGRGLDFTPRGSVLARFTHLQHD 480 Query: 482 EFQYVIEVNNTTGGNLMGTVRIFMAPKVDDNGQPMSFNKQRRLMIELDKFSQALRPGTNT 541 EFQYVIEVNNTTGGNLMGTVRIFMAPKVDDNGQPMSFNKQRRLMIELDKFSQALRPGTNT Sbjct: 481 EFQYVIEVNNTTGGNLMGTVRIFMAPKVDDNGQPMSFNKQRRLMIELDKFSQALRPGTNT 540 Query: 542 IRRRSVDSSVTIPYERTFRNQSERPGDPGTAGAAEFDFCGCGWPHHMLIPKGTAQGYPVV 601 IRRRSVDSSVTIPYERTFRNQSERPGDPGTAGAAEFDFCGCGWPHHMLIPKGTAQGYPVV Sbjct: 541 IRRRSVDSSVTIPYERTFRNQSERPGDPGTAGAAEFDFCGCGWPHHMLIPKGTAQGYPVV 600 Query: 602 LFVMISNWNNDRIEQDLVGSCNDAASYCGIRDRKYPDKQAMGYPFDRKMANDAATLSDFL 661 LFVMISNWNNDRIEQDLVGSCNDAASYCGIRDRKYPDKQAMGYPFDRKMANDAATLSDFL Sbjct: 601 LFVMISNWNNDRIEQDLVGSCNDAASYCGIRDRKYPDKQAMGYPFDRKMANDAATLSDFL 660 Query: 662 RPNMAVRDCSIQFSDTTVERGQQG 685 RPNMAVRDCSIQFSDTTVERGQQG Sbjct: 661 RPNMAVRDCSIQFSDTTVERGQQG 684 >3HHS-A nrPDB Length = 694 Score = 931 bits (2406), Expect = 0.0, Method: Composition-based stats. Identities = 333/682 (48%), Positives = 459/682 (67%), Gaps = 20/682 (2%) Query: 11 FFDRPNEPCFMQKGEDKVVFEIPDHYYPDKYKSLSNTLSNRFGNE--ATKRIPIRNI-TL 67 +DRP EP KGEDKV+FE+ + + +Y + L+NRFG+E +++I ++N+ + Sbjct: 10 LYDRPGEPMINTKGEDKVLFELTEQFLTPEYANNGLELNNRFGDEEEVSRKIILKNLDKI 69 Query: 68 PNLEVPMQLPYNDQFSLFVPKHRTMAAKLIDIFMGMRD--VEDLQSVCSYCQLRINPYMF 125 P QLP + FSLF+P H+ MA ++ID+ M + + +++L S C Y ++ +NP +F Sbjct: 70 PEFPKAKQLPNDADFSLFLPSHQEMANEVIDVLMSVTENQLQELLSTCVYARINLNPQLF 129 Query: 126 NYCLSVAILHRPDTKGLSIPTFAETFPDKFMDSKVFLRAREVSNVVI-SGSRMPVNVPIN 184 NYC +VAI+HR DT + + +AE FP KF+DS+VF +ARE + V+ + R P+ +P + Sbjct: 130 NYCYTVAIMHRRDTGKVRVQNYAEIFPAKFLDSQVFTQAREAAAVIPKTIPRTPIIIPRD 189 Query: 185 YTANTTEPEQRVAYFREDIGINLHHWHWHLVYPFDSADRSIVNKDRRGELFYYMHQQIIG 244 YTA E E R+AY+RED+GINLHHWHWHLVYPF ++D IV KDRRGELF+YMHQQII Sbjct: 190 YTATDLEEEHRLAYWREDLGINLHHWHWHLVYPFSASDEKIVAKDRRGELFFYMHQQIIA 249 Query: 245 RYNVERMCNGLPQVKPFSDFSAPIEEGYFPKLDSQVASRTWPPRFAGSVFRNLDRTVDQV 304 RYN ER+CN L +VK FSD+ PI E Y+PKLDS ++R WPPR AG +++L R VD + Sbjct: 250 RYNCERLCNSLKRVKKFSDWREPIPEAYYPKLDSLTSARGWPPRQAGMRWQDLKRPVDGL 309 Query: 305 KIDVRKLFTWRDQFLEAIQKMAIKMPNGRELPLDEVTGIDMLGNLMESSIISPNRGYYGD 364 + + + +R EAI + +P+ LD IDMLGN+ME+S++SPNR YG Sbjct: 310 NVTIDDMERYRRNIEEAIATGNVILPDKSTKKLD----IDMLGNMMEASVLSPNRDLYGS 365 Query: 365 LHNMGHVFAAYTHDPDHRHLEQFGVMGDSATAMRDPFFYRWHRFVDDVFNIYKE---KLT 421 +HN H F+AY HDP+HR+LE FGV+ D AT MRDPFFYR H +VDD+F +KE + Sbjct: 366 IHNNMHSFSAYMHDPEHRYLESFGVIADEATTMRDPFFYRVHAWVDDIFQSFKEAPHNVR 425 Query: 422 PYTNERLDFPGVRVSSVGIE--GARPNTLRTLWQQSTVELGRGLDFTPRGSVLARFTHLQ 479 PY+ +L+ PGV+V+SV +E G + N L T W QS V L +GLDF+ RG V ARFTHL Sbjct: 426 PYSRSQLENPGVQVTSVAVESAGGQQNVLNTFWMQSDVNLSKGLDFSDRGPVYARFTHLN 485 Query: 480 HDEFQYVIEVNNTTGGNLMGTVRIFMAPKVDDNGQPMSFNKQRRLMIELDKFSQALRPGT 539 H F+YVI+ NNT TVRIF+APK D+ P + + QR++ IE+D+F L G Sbjct: 486 HRPFRYVIKANNTASA-RRTTVRIFIAPKTDERNLPWALSDQRKMFIEMDRFVVPLSAGE 544 Query: 540 NTIRRRSVDSSVTIPYERTFRNQSERPGDPGTAGAAEFDFCGCGWPHHMLIPKGTAQGYP 599 NTI R+S +SS+TIP+E+TFR+ S + DP + A F++CGCGWP HML+PKGT G Sbjct: 545 NTITRQSTESSLTIPFEQTFRDLSIQGSDPRRSELAAFNYCGCGWPQHMLVPKGTVGGVA 604 Query: 600 VVLFVMISNWNNDRIEQ--DLVGSCNDAASYCGIRDRKYPDKQAMGYPFDRKMANDAATL 657 LFVM+SN+ D+IEQ SC +A+ +CG++D+KYPD + MGYPFDR +N A + Sbjct: 605 YQLFVMLSNYELDKIEQPDGRELSCVEASMFCGLKDKKYPDARPMGYPFDRP-SNSATNI 663 Query: 658 SDF-LRPNMAVRDCSIQFSDTT 678 DF NM ++D I+ SD T Sbjct: 664 EDFSAMSNMGLQDIVIKLSDVT 685 >1NOL-A nrPDB Length = 628 Score = 851 bits (2198), Expect = 0.0, Method: Composition-based stats. Identities = 243/603 (40%), Positives = 353/603 (58%), Gaps = 14/603 (2%) Query: 75 QLPYNDQFSLFVPKHRTMAAKLIDIFMGMRDVEDLQSVCSYCQLRINPYMFNYCLSVAIL 134 +L FS F P H A L ++F D D + + +N +F + VA+L Sbjct: 39 KLQPGAIFSCFHPDHLEEARHLYEVFWEAGDFNDFIEIAKEARTFVNEGLFAFAAEVAVL 98 Query: 135 HRPDTKGLSIPTFAETFPDKFMDSKVFLRAREVSNVVISGSRMPVNVPINYTANTTEPEQ 194 HR D KGL +P E FPDKF+ S A + ++V P+ V + T N +PE Sbjct: 99 HRDDCKGLYVPPVQEIFPDKFIPSAAINEAFKKAHVRPEFDESPILVDVQDTGNILDPEY 158 Query: 195 RVAYFREDIGINLHHWHWHLVYPFDSADRS-IVNKDRRGELFYYMHQQIIGRYNVERMCN 253 R+AY+RED+GIN HHWHWHLVYP + KDR+GELFYYMHQQ+ RY+ ER+ N Sbjct: 159 RLAYYREDVGINAHHWHWHLVYPSTWNPKYFGKKKDRKGELFYYMHQQMCARYDCERLSN 218 Query: 254 GLPQVKPFSDFSAPIEEGYFPKLDSQVASRTWPPRFAGSVFRNLDRTVDQVKIDVRKLFT 313 G+ ++ PF++F P+ GY P L + + + PR G R+L I++ ++ Sbjct: 219 GMHRMLPFNNFDEPLA-GYAPHLTHVASGKYYSPRPDGLKLRDLG------DIEISEMVR 271 Query: 314 WRDQFLEAIQKMAIKMPNGRELPLDEVTGIDMLGNLMESSIISPNRGYYGDLHNMGHVFA 373 R++ L++I + +G LDE+ G D+LG L+ESS S N YYG+LHN GHV Sbjct: 272 MRERILDSIHLGYVISEDGSHKTLDELHGTDILGALVESSYESVNHEYYGNLHNWGHVTM 331 Query: 374 AYTHDPDHRHLEQFGVMGDSATAMRDPFFYRWHRFVDDVFNIYKEKLTPYTNERLDFPGV 433 A HDPD R E+ GVM D++T++RDP FY WHRF+D++F+ YK L PY ++ L+FP + Sbjct: 332 ARIHDPDGRFHEEPGVMSDTSTSLRDPIFYNWHRFIDNIFHEYKNTLKPYDHDVLNFPDI 391 Query: 434 RVSSVGIEGARPNTLRTLWQQSTVELGRGLDFTPRGSVLARFTHLQHDEFQYVIEVNNTT 493 +V V + N + T ++ +EL G++ S+ AR+ HL H+ F Y + V N + Sbjct: 392 QVQDVTLHARVDNVVHTFMREQELELKHGINPGNARSIKARYYHLDHEPFSYAVNVQNNS 451 Query: 494 GGNLMGTVRIFMAPKVDDNGQPMSFNKQRRLMIELDKFSQALRPGTNTIRRRSVDSSVTI 553 + TVRIF+APK D+ G + ++ RR IELDKF L PG NT+ R S+DSSVT+ Sbjct: 452 ASDKHATVRIFLAPKYDELGNEIKADELRRTAIELDKFKTDLHPGKNTVVRHSLDSSVTL 511 Query: 554 PYERTFRNQSERPGDPGTAGAAEFDFCGCGWPHHMLIPKGTAQGYPVVLFVMISNWNNDR 613 ++ TF + G + ++C CGWP H+L+PKG +G LFVM+++W+ D+ Sbjct: 512 SHQPTFEDLLHGVG----LNEHKSEYCSCGWPSHLLVPKGNIKGMEYHLFVMLTDWDKDK 567 Query: 614 IEQDLVGSCNDAASYCGIRDRKYPDKQAMGYPFDRKMANDAATLSDFLRPNMAVRDCSIQ 673 ++ +C DA SYCG RD KYPDK+ MG+PFDR + + +SDFL NM ++D I+ Sbjct: 568 VDGSESVACVDAVSYCGARDHKYPDKKPMGFPFDRPIHTEH--ISDFLTNNMFIKDIKIK 625 Query: 674 FSD 676 F + Sbjct: 626 FHE 628 >3IXV-A nrPDB Length = 626 Score = 848 bits (2190), Expect = 0.0, Method: Composition-based stats. Identities = 261/603 (43%), Positives = 355/603 (58%), Gaps = 19/603 (3%) Query: 76 LPYNDQFSLFVPKHRTMAAKLIDIFMGMRDVEDLQSVCSYCQLRINPYMFNYCLSVAILH 135 LP FS F +H A +L G +D D +C + +N MF Y +SVA+LH Sbjct: 39 LPRGTLFSCFHARHLAEATELYVALYGAKDFNDFIHLCEQARQIVNEGMFVYAVSVAVLH 98 Query: 136 RPDTKGLSIPTFAETFPDKFMDSKVFLRA-REVSNVVISGSRMPVNVPINYTANTTEPEQ 194 R D KG+++P E FPD+F+ ++ RA +E SN + + V T N +PE Sbjct: 99 REDCKGITVPPIQEVFPDRFVPAETINRANKEASN---HPDQQSIVVEAEETGNILDPEY 155 Query: 195 RVAYFREDIGINLHHWHWHLVYPFDSADR-SIVNKDRRGELFYYMHQQIIGRYNVERMCN 253 +++YFREDIGIN HHWHWH+VYP KDR+GELF+YMHQQ+ RY+ ER+ N Sbjct: 156 KLSYFREDIGINAHHWHWHIVYPATWNPTVMGKEKDRKGELFFYMHQQMCARYDSERLSN 215 Query: 254 GLPQVKPFSDFSAPIEEGYFPKLDSQVASRTWPPRFAGSVFRNLDRTVDQVKIDVRKLFT 313 GL ++ PF +F P+ EGY P L S V+ + R G +L +DV+ + Sbjct: 216 GLQRMIPFHNFDEPL-EGYAPHLTSLVSGLQYASRPEGYSIHDLS------DVDVQDMVR 268 Query: 314 WRDQFLEAIQKMAIKMPNGRELPLDEVTGIDMLGNLMESSIISPNRGYYGDLHNMGHVFA 373 WR++ L+AI I + ++PLD G D+LG+++ESS S N YYG LHN GHV Sbjct: 269 WRERILDAINMHYIVDKDNNKIPLDIEHGTDILGDIIESSDESKNVEYYGSLHNWGHVMM 328 Query: 374 AYTHDPDHRHLEQFGVMGDSATAMRDPFFYRWHRFVDDVFNIYKEKLTPYTNERLDFPGV 433 A DPDHR E GVM D++T++RDP FYRWHRF+D++F +K+ PYT E L FPGV Sbjct: 329 ANITDPDHRFQENPGVMSDTSTSLRDPIFYRWHRFIDNIFQEHKKSFHPYTKEELSFPGV 388 Query: 434 RVSSVGIEGARPNTLRTLWQQSTVELGRGLDFTPRGSVLARFTHLQHDEFQYVIEVNNTT 493 V V I N + TL ++S +EL G++F SV ++ HL H+ F Y I V N + Sbjct: 389 EVVGVSINSKTANVITTLIKESLLELSHGINFGTDQSVKVKYHHLDHEPFTYNIVVENNS 448 Query: 494 GGNLMGTVRIFMAPKVDDNGQPMSFNKQRRLMIELDKFSQALRPGTNTIRRRSVDSSVTI 553 G TVRIF+APK D+ + ++QRRL IELDKF L PG NTI R DSSVTI Sbjct: 449 GAEKHSTVRIFLAPKYDELNNKLEPDEQRRLFIELDKFFYTLTPGKNTIVRNHQDSSVTI 508 Query: 554 PYERTFRNQSERPGDPGTAGAAEFDFCGCGWPHHMLIPKGTAQGYPVVLFVMISNWNNDR 613 RTF ++ G ++C CGWP HMLIP+G+ +G LFVM+++ + D Sbjct: 509 SKVRTF----DQLGAGEGVSEDSTEYCSCGWPEHMLIPRGSHKGMEFELFVMLTDHDEDT 564 Query: 614 IEQ-DLVGSCNDAASYCGIRDRKYPDKQAMGYPFDRKMANDAATLSDFLRPNMAVRDCSI 672 + C+DA SYCG RD +YPDK+AMG+PFDRK+ +A T ++FL PNM + D I Sbjct: 565 VAGLSENAVCSDAVSYCGARDDRYPDKKAMGFPFDRKI--EARTAAEFLTPNMGLTDIKI 622 Query: 673 QFS 675 +F Sbjct: 623 KFH 625 >1HC1-A nrPDB Length = 657 Score = 749 bits (1934), Expect = 0.0, Method: Composition-based stats. Identities = 181/576 (31%), Positives = 285/576 (49%), Gaps = 18/576 (3%) Query: 82 FSLFVPKHRTMAAKLIDIFMGMRDVEDLQSVCSYCQLRINPYMFNYCLSVAILHRPDTKG 141 +SLF + R A L + ++ +S +Y + R+N F Y L V+++H G Sbjct: 72 YSLFNTRQRKEALMLFAVLNQCKEWYCFRSNAAYFRERMNEGEFVYALYVSVIHSKLGDG 131 Query: 142 LSIPTFAETFPDKFMDSKVFLRAREVSNVVISGSRMPVNVPINYTANTTEPEQRVAYFRE 201 + +P + P F +S+V +A ++ P +++T EQRVAYF E Sbjct: 132 IVLPPLYQITPHMFTNSEVIDKAYSAKM-----TQKPGTFNVSFTGTKKNREQRVAYFGE 186 Query: 202 DIGINLHHWHWHLVYPFDSADRSIVNKDRRGELFYYMHQQIIGRYNVERMCNGLPQVKPF 261 DIG+N+HH WH+ +PF D + DR+GELF+++H Q+ R++ ER+ N L V Sbjct: 187 DIGMNIHHVTWHMDFPFWWEDSYGYHLDRKGELFFWVHHQLTARFDFERLSNWLDPVDEL 246 Query: 262 SDFSAPIEEGYFPKLDSQVASRTWPPRFAGSVFRNLDRTVDQVKIDVRKLFTWRDQFLEA 321 + I EG+ P L S +P R F ++D V L + EA Sbjct: 247 H-WDRIIREGFAP-LTSYKYGGEFPVRPDNIHFEDVDGVAH-----VHDLEITESRIHEA 299 Query: 322 IQKMAIKMPNGRELPLDEVTGIDMLGNLMESSIISPNRGYYGDLHNMGHVFAAYTHDPDH 381 I I +G + + + GI++LG+++ESS S N YYG LHN HV DP Sbjct: 300 IDHGYITDSDGHTIDIRQPKGIELLGDIIESSKYSSNVQYYGSLHNTAHVMLGRQGDPHG 359 Query: 382 RHLEQFGVMGDSATAMRDPFFYRWHRFVDDVFNIYKEKLTPYTNERLDFPGVRVSSVGIE 441 + GVM TA RDP F+R H+++D++F + + PYT++ L+F G+ V+ V I+ Sbjct: 360 KFNLPPGVMEHFETATRDPSFFRLHKYMDNIFKKHTDSFPPYTHDNLEFSGMVVNGVAID 419 Query: 442 GARPNTLRTLWQQSTVELGRGLDFTPRGSVLARFTHLQHDEFQYVIEVNNTTGGNLMGTV 501 G T +Q S + + + AR L H+EF Y I ++N G + T Sbjct: 420 GELI-TFFDEFQYSLINAVDSGENIEDVEINARVHRLNHNEFTYKITMSNNNDGERLATF 478 Query: 502 RIFMAPKVDDNGQPMSFNKQRRLMIELDKFSQALRPGTNTIRRRSVDSSVTIPYERTFRN 561 RIF+ P D+NG ++ ++ R IELDKF Q + G TI R S DSSVT+P +F++ Sbjct: 479 RIFLCPIEDNNGITLTLDEARWFCIELDKFFQKVPSGPETIERSSKDSSVTVPDMPSFQS 538 Query: 562 QSERPGDPGTAGAAEFDFC----GCGWPHHMLIPKGTAQGYPVVLFVMISNWNNDRIEQD 617 E+ D G + D CG P ML+PK +G L+V +++ + D + Sbjct: 539 LKEQ-ADNAVNGGHDLDLSAYERSCGIPDRMLLPKSKPEGMEFNLYVAVTDGDKDTEGHN 597 Query: 618 LVGSCNDAASYCGIRDRKYPDKQAMGYPFDRKMAND 653 + CG+ YPD + +GYP +R++ ++ Sbjct: 598 GGHDYGGTHAQCGVHGEAYPDNRPLGYPLERRIPDE 633 >3GWJ-A nrPDB Length = 674 Score = 610 bits (1572), Expect = e-175, Method: Composition-based stats. Identities = 158/631 (25%), Positives = 284/631 (45%), Gaps = 78/631 (12%) Query: 76 LPYNDQFSLFVPKHRTMAAKLIDIFMGMRDVEDLQSVCSYCQLRINPYMFNYCLSVAILH 135 LP ++FS+F K R A L +F +D + ++ ++ +N F Y +AI+ Sbjct: 69 LPKYNEFSVFHDKLRDEAIALFHLFYYAKDFDTFYKSAAFARVHLNQGQFLYAYYIAIIQ 128 Query: 136 RPDTKGLSIPTFAETFPDKF--MDSKVFLRAREVSNVVISGSRMPVNVPI---------- 183 R DT G+ +P E +P+ F +D+ + ++ N +I+ V I Sbjct: 129 RKDTYGIVLPAPYEIYPELFVNIDTTYKMFRTKMQNGLIN-PEAAVEYGIVKEDNHYVYY 187 Query: 184 -NYTANTT--EPEQRVAYFREDIGINLHHWHWHLVYPFDS-ADRSIVNKDRRGELFYYMH 239 NY+ T EQR+AYF EDIG+N +++ +H+ PF A++ K+RRGE+++Y + Sbjct: 188 SNYSNAITYYNEEQRLAYFTEDIGLNAYYFFFHIHLPFWWTAEKYGNLKERRGEMYHYFY 247 Query: 240 QQIIGRYNVERMCNGLPQVKPFSDFSAPIEEGYFPKLDSQVASRTWPPRFAGSVFRNLDR 299 Q++ RY ER+ NGL + FS +S P++ G++P L S + P F N+ Sbjct: 248 DQLLTRYYFERLTNGLGTIPEFSWYS-PVKTGHYPLLTSYYTPFSQRPNFY-----NVHS 301 Query: 300 TVDQVKIDVRKLFTWRDQFLEAIQKMAIKMPNGRELPLDEVTGIDMLGNLMESSIISPNR 359 + KI R L + + F++A+QK + G+ + L++ +GN + + Sbjct: 302 EENYEKI--RFLDAYENYFVQALQKGVFE-GFGQTIYLNDSKANSFVGNYWQDNADLYGE 358 Query: 360 GYYGDLHNMGHVFAAYTHDPDHRHLEQFGVMGDS----ATAMRDPFFYRWHRFVDDVFNI 415 D + A + +++ M + T++RDP FY+ + + FN Sbjct: 359 EVTKDYQRSYEIVARQVLGAAPKPFDKYTFMPSALDFYQTSLRDPTFYQLYNRIIGYFNQ 418 Query: 416 YKEKLTPYTNERLDFPGVRVSSVGIEGARPNTLRTLWQQSTVELGRGLDFTPRGSVLARF 475 +K+ L P++ E+L F GV+V+ + L T ++ + + F + ++ Sbjct: 419 FKQYLEPHSQEKLHFVGVKVN-----NVVVDKLVTFFEYYDFDATNTV-FLTEEELKTKY 472 Query: 476 TH--------LQHDEFQYVIEVNNTTGGNLMGTVRIFMAPKVDDNGQPMSFNKQRRLMIE 527 H L H F I++ + V+IFM PK ++NG P++ E Sbjct: 473 PHNLKVRQPRLNHQPFNINIDIKADVATD--AVVKIFMGPKYNENGFPITLENDWMKFFE 530 Query: 528 LDKFSQALRPGTNTIRRRSVDSSV----TIPYERTFRNQSERPGDPGTAGAAEFDFC-GC 582 +D F+ + PG NTI R S + + ++P ++ + G FD Sbjct: 531 MDWFTHKITPGQNTIVRNSNEFVIFKEDSLPSTELYKLLEK--------GKVPFDMSEDF 582 Query: 583 GW-PHHMLIPKGTAQGYPVVLFVMISNWNNDRIEQDLVGSCNDAASYCGIRDRKYPDKQA 641 G+ P +++P+GT G+P V + + + + Y ++ D + Sbjct: 583 GYLPKRLMLPRGTKGGFPFQFVVFVYPFE---------STTKNLTPY----EKFMIDNKP 629 Query: 642 MGYPFDRKMANDAATLSDFLRPNMAVRDCSI 672 +GYPFDR + S F +PN+ RD S+ Sbjct: 630 LGYPFDRPVDT-----SCFKQPNIFFRDVSV 655 >6HQJ-A nrPDB Length = 506 Score = 42.8 bits (99), Expect = 6e-04, Method: Composition-based stats. Identities = 40/194 (20%), Positives = 71/194 (36%), Gaps = 20/194 (10%) Query: 234 LFYYMHQQIIGRYNVERMCNGLPQVK----PFSDFSAPIEEGYFPKLDSQVASRTWPPRF 289 LF+ H+ + Y ER+ L PF ++ P + P D + R Sbjct: 115 LFFPFHRWYL--YFYERILGSLIDDPTFGLPFWNWDHPKGMRFPPMFDVPGTALYDERRG 172 Query: 290 AGSVFRN-LDRTVDQVKIDVRKLFTWRDQFLEAIQKMAIKMPNGRELPLDEVTGIDMLGN 348 N +D +++ +L + + M ++ PL G LG+ Sbjct: 173 DQIHNGNFIDLGSFGDQVETTQLQLMTNN----LTLMYRQLVTNSPCPLMFFGGPYTLGS 228 Query: 349 LMESSIISPNRGYYGDLHNMGHVFAAYTHD---PDHRHLEQFGVMGDSATAMRDPFFYRW 405 +E++ N H+ H++ PD + + MG+ +A DP FY Sbjct: 229 TVEAAGTVENIP-----HSPVHIWVGTRRGSVLPDGK-ISNGEDMGNFYSAGLDPLFYCH 282 Query: 406 HRFVDDVFNIYKEK 419 H VD ++N +K Sbjct: 283 HSNVDRMWNEWKAT 296 >6ELS-A nrPDB Length = 506 Score = 37.8 bits (86), Expect = 0.015, Method: Composition-based stats. Identities = 38/196 (19%), Positives = 67/196 (34%), Gaps = 35/196 (17%) Query: 234 LFYYMHQQIIGRYNVER----MCNGLPQVKPFSDFSAP----IEEGYF----PKLDSQVA 281 LF+ H+ + Y E+ + N PF ++ +P + Y P D + Sbjct: 113 LFFPFHRYYL--YFFEKILGKLINDPTFALPFWNWDSPAGMPLPAIYADPKSPLYDKLRS 170 Query: 282 SRTWPPRFAGSVFRNLDRTVDQVKIDVRKLFTWRDQFLEAIQKMAIKMPNGRELPLDEVT 341 + PP + + V + L Q + K+ G P Sbjct: 171 ANHQPPTLVDLDYNGTEDNVSKETTINANLKIMYRQMVS--NSKNAKLFFGN--PYRAGD 226 Query: 342 GIDMLGNLMESSIISPNRGYYGDLHNMGHVFAAYTHDPDHRHLEQFGVMGDSATAMRDPF 401 D G +E + +P + GD + + MG+ +A RDP Sbjct: 227 EPDPGGGSIEGTPHAPVHLWTGD-------------NTQPNFED----MGNFYSAGRDPI 269 Query: 402 FYRWHRFVDDVFNIYK 417 F+ H VD +++I+K Sbjct: 270 FFAHHSNVDRMWSIWK 285 >4PO6-A nrPDB Length = 567 Score = 34.3 bits (77), Expect = 0.18, Method: Composition-based stats. Identities = 42/256 (16%), Positives = 79/256 (30%), Gaps = 34/256 (13%) Query: 443 ARPNTLRTLWQQSTVELGRGLDFTPRGSVLARFTHLQHDEFQYVIEVNNTTGGNLMGTVR 502 N + +LW+ ST E S+ F HL H ++ I + + + Sbjct: 139 EFVNDVASLWELSTEEEIHHFKN---ESLGMAFLHLCHLALRHGIPLEEVA---KKTSFK 192 Query: 503 IFMAPKVDDNGQPMSFNKQRRLMIELDKFSQALRPGT-----------NTIRRRSVDSS- 550 + + + S + RL +F + +PG T+ R + Sbjct: 193 DCIPRSFRRHIRQHSALTRLRLRNVFRRFLRDFQPGRLSQQMVMVKYLATLERLAPRFGT 252 Query: 551 --VTIPYERTFRNQSERPGDPGTAGAAEFD---FCGCGWPHHMLIPKGTAQGYPVVLFVM 605 V + + R P +G A D G P H ++ GT G Sbjct: 253 ERVPVCHLRLLAQAEGEPCYIRDSGVAPTDPGPESAAGPPTHEVLVTGT-GGIQW----- 306 Query: 606 ISNWNNDRIEQDLVGSCNDAASYCGIRDRKYPDKQAMGYPFDRKMANDAATLSDFLRPNM 665 + +++ + + +K +A+G P DR A DF Sbjct: 307 -WPVEEEVNKEEGSSGSSGRNPQASLFGKKAKAHKAVGQPADRPREPLWAYFCDFRD--- 362 Query: 666 AVRDCSIQFSDTTVER 681 + ++ ++ R Sbjct: 363 -ITHVVLKEHCVSIHR 377 >4Z13-A nrPDB Length = 520 Score = 33.1 bits (74), Expect = 0.38, Method: Composition-based stats. Identities = 39/203 (19%), Positives = 69/203 (33%), Gaps = 34/203 (16%) Query: 234 LFYYMHQQIIGRYNVERMCNGLPQVKPFS----DFSAP---------IEEGYFPKLDSQV 280 LF+ H+ + Y ER+ L F+ + P + + P D Sbjct: 123 LFFPFHRWYL--YFYERILGSLIDEPNFALPYWKWDEPKGMPISNIFLGDASNPLYDQYR 180 Query: 281 ASRTWPPRFAGSVFRNLDRTV-DQVKIDVRKLFTWRDQFLEAIQKMAIKMPNGRELPLDE 339 + R + D+ + DQ ++ +RD + + G+ + D Sbjct: 181 DANHIEDRIVDLDYDGKDKDIPDQQQVACNLSTVYRDLVRNGVDPTSFFG--GKYVAGDS 238 Query: 340 VTGIDMLGNLMESSIISPNRGYYGDLHNMGHVFAAYTHDPDHRHLEQFGVMGDSATAMRD 399 + S+ S G + +H DP + E MG+ +A D Sbjct: 239 PVANG------DPSVGSVEAGSHTAVHRW-------VGDPTQPNNED---MGNFYSAGYD 282 Query: 400 PFFYRWHRFVDDVFNIYKEKLTP 422 P FY H VD ++ ++KE P Sbjct: 283 PVFYIHHANVDRMWKLWKELRLP 305 >3AIW-A nrPDB Length = 564 Score = 33.1 bits (74), Expect = 0.46, Method: Composition-based stats. Identities = 19/97 (19%), Positives = 35/97 (36%), Gaps = 7/97 (7%) Query: 159 KVFLRAREVSNVVISGSRMPVNVPINYTANTTEPEQRVAYFREDIGINLHHWHWHLVYPF 218 KV+ + S ++ +G+ P I+Y N R GI + WH P Sbjct: 143 KVYRFSISWSRILPNGTGKPNQKGIDYYNNLINSLIRH-------GIVPYVTIWHWDTPQ 195 Query: 219 DSADRSIVNKDRRGELFYYMHQQIIGRYNVERMCNGL 255 D+ D++ Y ++ + +R+ N Sbjct: 196 ALEDKYGGFLDKQIVNDYKYFAELCFQSFGDRVKNWF 232 >2P3X-A nrPDB Length = 339 Score = 32.8 bits (73), Expect = 0.52, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 3/55 (5%) Query: 363 GDLHNMGHVFAAYTHDPDHRHLEQFGVMGDSATAMRDPFFYRWHRFVDDVFNIYK 417 G L + H + E MG+ TA RDP F+ H VD ++NI+K Sbjct: 232 GTLEHAPHNIVHKWTGLADKPSED---MGNFYTAGRDPIFFGHHANVDRMWNIWK 283 >4Z0Z-A nrPDB Length = 350 Score = 32.4 bits (72), Expect = 0.69, Method: Composition-based stats. Identities = 39/203 (19%), Positives = 69/203 (33%), Gaps = 34/203 (16%) Query: 234 LFYYMHQQIIGRYNVERMCNGLPQVKPFS----DFSAP---------IEEGYFPKLDSQV 280 LF+ H+ + Y ER+ L F+ + P + + P D Sbjct: 120 LFFPFHRWYL--YFYERILGSLIDEPNFALPYWKWDEPKGMPISNIFLGDASNPLYDQYR 177 Query: 281 ASRTWPPRFAGSVFRNLDRTV-DQVKIDVRKLFTWRDQFLEAIQKMAIKMPNGRELPLDE 339 + R + D+ + DQ ++ +RD + + G+ + D Sbjct: 178 DANHIEDRIVDLDYDGKDKDIPDQQQVACNLSTVYRDLVRNGVDPTSFFG--GKYVAGDS 235 Query: 340 VTGIDMLGNLMESSIISPNRGYYGDLHNMGHVFAAYTHDPDHRHLEQFGVMGDSATAMRD 399 + S+ S G + +H DP + E MG+ +A D Sbjct: 236 PVANG------DPSVGSVEAGSHTAVHRW-------VGDPTQPNNED---MGNFYSAGYD 279 Query: 400 PFFYRWHRFVDDVFNIYKEKLTP 422 P FY H VD ++ ++KE P Sbjct: 280 PVFYIHHANVDRMWKLWKELRLP 302 >6GGJ-A nrPDB Length = 318 Score = 31.6 bits (70), Expect = 1.3, Method: Composition-based stats. Identities = 36/169 (21%), Positives = 59/169 (34%), Gaps = 28/169 (16%) Query: 104 RDVEDLQSVCSYCQLRINPYMFNYCLSVAILHRPDTKGLSIPTFAETFPDKFMDSKVFLR 163 +D+E ++VC +N F + LH GL +P + +K+ + Sbjct: 91 KDMEAFKAVCV-----LNCVTFVWDDMDPALHD---FGLFLPQLRKIC-EKYYGPEDAEV 141 Query: 164 AREVSNVVISGSRMPVNVPINYTANTTEPEQRVAYFREDIGINLHHWHW-HLVYPFDSAD 222 A E + ++ M + PI TT PEQ + DIG++ W + YP Sbjct: 142 AYEAARAFVTSDHMFRDSPIKAALCTTSPEQYFRFRVTDIGVD----FWMKMSYPIY--- 194 Query: 223 RSIVNKDRRGELFYYMHQQIIGRYNVERMCNGLPQVKPFSDFSAPIEEG 271 R E + + R GL V F + + G Sbjct: 195 -------RHPEFTEHAKTSLAARMT----TRGLTIVNDFYSYDREVSLG 232 >5DDZ-A nrPDB Length = 275 Score = 30.4 bits (67), Expect = 2.5, Method: Composition-based stats. Identities = 20/124 (16%), Positives = 44/124 (35%), Gaps = 20/124 (16%) Query: 48 LSNRFGNEATKRIPIRNIT-LPNLEVPMQLPYNDQFSL----------FVPKHRTMAAKL 96 L NR G +R + ++ L V + L + + + F P ++ A + Sbjct: 53 LPNRVGLPINQRFILVELSNHAELSVTLALDVTNAYVVGYRAGNSAYFFHPDNQEDAEAI 112 Query: 97 IDIFMGMRDVEDL---------QSVCSYCQLRINPYMFNYCLSVAILHRPDTKGLSIPTF 147 +F +++ + + + I +++ L+ T G +PT Sbjct: 113 THLFTDVQNRYTFAFGGNYDRLEQLAGNLRENIELGNGPLEEAISALYYYSTGGTQLPTL 172 Query: 148 AETF 151 A +F Sbjct: 173 ARSF 176 >5SV3-B nrPDB Length = 190 Score = 30.4 bits (67), Expect = 2.9, Method: Composition-based stats. Identities = 20/124 (16%), Positives = 44/124 (35%), Gaps = 20/124 (16%) Query: 48 LSNRFGNEATKRIPIRNIT-LPNLEVPMQLPYNDQFSL----------FVPKHRTMAAKL 96 L NR G +R + ++ L V + L + + + F P ++ A + Sbjct: 37 LPNRVGLPINQRFILVELSNHAELSVTLALDVTNAYVVGYRAGNSAYFFHPDNQEDAEAI 96 Query: 97 IDIFMGMRDVEDL---------QSVCSYCQLRINPYMFNYCLSVAILHRPDTKGLSIPTF 147 +F +++ + + + I +++ L+ T G +PT Sbjct: 97 THLFTDVQNRYTFAFGGNYDRLEQLAGNLRENIELGNGPLEEAISALYYYSTGGTQLPTL 156 Query: 148 AETF 151 A +F Sbjct: 157 ARSF 160 >5E2H-A nrPDB Length = 357 Score = 30.1 bits (66), Expect = 3.3, Method: Composition-based stats. Identities = 18/75 (24%), Positives = 33/75 (44%), Gaps = 13/75 (17%) Query: 127 YCLSVAILHRPDTKGLSIPTFAETFPDKFMDSKVFLRAREVSNVVISGSRMPVNVPINYT 186 Y + +L+ D G +P A RA E+ N+ G+ +P+ + Sbjct: 73 YAATRGVLNLDDHPGRYLPALA---------GTPIDRA-ELRNL---GTYTAGGLPLQFP 119 Query: 187 ANTTEPEQRVAYFRE 201 + T+ EQ +AYF++ Sbjct: 120 ESVTDDEQMIAYFQQ 134 >3I4X-A nrPDB Length = 465 Score = 29.3 bits (64), Expect = 5.5, Method: Composition-based stats. Identities = 24/155 (15%), Positives = 50/155 (32%), Gaps = 41/155 (26%) Query: 332 GRELPLDEVTGIDMLGNLMESSIISPNRGYYGDLHNMGHVFAAYTHDPDHRHLEQFGVMG 391 GR + G+ ++ L + +SP Y GV+ Sbjct: 286 GRRRDASTLEGLSLVRELWDLIQLSPGLKSY------------------PAPYLPLGVIP 327 Query: 392 DSATAMRDPFFYRWHRFVDDVFNIYKEKLTPYTNERLDFPGVRVSSVGIEGARPNTLRTL 451 D R P F +++ P ++ F ++ + + + L T Sbjct: 328 DE----RLPLMAN--------FTLHQN--DPVPEPQVYFTTFGMNDMAV----ADALTTF 369 Query: 452 WQQSTV-ELGRGLDFTPRGSVLARFTHLQHDEFQY 485 +++ E+ R + T + + + H HD+ Y Sbjct: 370 FERRGWSEMARTYETT----LKSYYPHADHDKLNY 400 >4QLO-A nrPDB Length = 360 Score = 29.3 bits (64), Expect = 5.7, Method: Composition-based stats. Identities = 12/60 (20%), Positives = 24/60 (40%), Gaps = 1/60 (1%) Query: 263 DFSAPIEEGYFPKLDSQVASRTWPPRFAGSVFRNLDRTVDQVKIDVRKLFTWRDQFLEAI 322 + I+ GY P D Q + GS L+ K+ +R + ++ ++A+ Sbjct: 61 WWREIIDGGYIPIHDYQFLTFDVIGSPFGSS-SPLNDPHFPKKLTLRDIVRANERGIQAL 119 >4V6U-AE nrPDB Length = 243 Score = 29.3 bits (64), Expect = 5.9, Method: Composition-based stats. Identities = 22/122 (18%), Positives = 35/122 (28%), Gaps = 17/122 (13%) Query: 97 IDIFMGMRDVEDLQSVCSYCQLRINPYMFNYCLSVAILHRPDTKGLSIPTFAETFPDKFM 156 I + +RD + +N F V R D K FP M Sbjct: 43 IPLLYIVRDYLGYAKTAREARKILNEGKFLVDGRV----RKDYK----------FPVGIM 88 Query: 157 DSKVFLRAREVSNVVISGSRMPVNVPINYTANTTEP---EQRVAYFREDIGINLHHWHWH 213 D E V+ + + PI+ +P + + +N H H Sbjct: 89 DVVSIPETGEHYRVLPNRIGKLILHPISEDEAFIKPLRIRNKRMIKGARVQLNFHDGTNH 148 Query: 214 LV 215 +V Sbjct: 149 IV 150 >6EKK-A nrPDB Length = 393 Score = 28.9 bits (63), Expect = 6.8, Method: Composition-based stats. Identities = 17/87 (19%), Positives = 32/87 (36%), Gaps = 3/87 (3%) Query: 116 CQLRINPYMFNYCLSVAILHRPDTKGLSIPTFAETFPDKFMDSKVFLRAREVSNVVISGS 175 +++ NP + + V + + LS P FP+ + D +V + S Sbjct: 2 SRIKQNP-ETTFEVYVEVAYPRTGGTLSDPEVQRQFPEDYSDQEVLQTLTKFCFPFYVDS 60 Query: 176 RMPVNVPINYT--ANTTEPEQRVAYFR 200 V N+T + +QR + R Sbjct: 61 LTVSQVGQNFTFVLTDIDSKQRFGFCR 87 >5CE9-A nrPDB Length = 339 Score = 28.9 bits (63), Expect = 6.9, Method: Composition-based stats. Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 6/52 (11%) Query: 366 HNMGHVFAAYTHDPDHRHLEQFGVMGDSATAMRDPFFYRWHRFVDDVFNIYK 417 HN H++ P+ +E MG+ +A RDP F+ H VD ++ I+K Sbjct: 239 HNNIHLWTGDDTQPN---IEN---MGNFYSAGRDPIFFAHHSNVDRMWTIWK 284 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.309 0.131 0.351 Lambda K H 0.267 0.0399 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 26,281,550 Number of Sequences: 36641 Number of extensions: 1080639 Number of successful extensions: 2717 Number of sequences better than 10.0: 25 Number of HSP's better than 10.0 without gapping: 16 Number of HSP's successfully gapped in prelim test: 30 Number of HSP's that attempted gapping in prelim test: 2629 Number of HSP's gapped (non-prelim): 47 length of query: 685 length of database: 10,336,785 effective HSP length: 104 effective length of query: 581 effective length of database: 6,526,121 effective search space: 3791676301 effective search space used: 3791676301 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.2 bits) S2: 62 (28.5 bits)