BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= O43913 (435 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 5UJM-E nrPDB 898 0.0 5UJ7-E nrPDB 591 e-169 4XGC-E nrPDB 276 1e-74 5V8F-E nrPDB 73 2e-13 2QBY-A nrPDB 36 0.025 1UM8-A nrPDB 33 0.26 5EVL-A nrPDB 32 0.36 5K3J-A nrPDB 32 0.46 3B6V-A nrPDB 32 0.70 5CGW-A nrPDB 31 0.95 4WBG-A nrPDB 30 2.5 6FM7-A nrPDB 30 2.5 4I5O-A nrPDB 30 2.8 2QZ6-A nrPDB 30 2.9 4GEW-A nrPDB 28 6.6 1BCC-F nrPDB 28 8.0 >5UJM-E nrPDB Length = 435 Score = 898 bits (2320), Expect = 0.0, Method: Compositional matrix adjust. Identities = 435/435 (100%), Positives = 435/435 (100%) Query: 1 MPHLENVVLCRESQVSILQSLFGERHHFSFPSIFIYGHTASGKTYVTQTLLKTLELPHVF 60 MPHLENVVLCRESQVSILQSLFGERHHFSFPSIFIYGHTASGKTYVTQTLLKTLELPHVF Sbjct: 1 MPHLENVVLCRESQVSILQSLFGERHHFSFPSIFIYGHTASGKTYVTQTLLKTLELPHVF 60 Query: 61 VNCVECFTLRLLLEQILNKLNHLSSSEDGCSTEITCETFNDFVRLFKQVTTAENLKDQTV 120 VNCVECFTLRLLLEQILNKLNHLSSSEDGCSTEITCETFNDFVRLFKQVTTAENLKDQTV Sbjct: 61 VNCVECFTLRLLLEQILNKLNHLSSSEDGCSTEITCETFNDFVRLFKQVTTAENLKDQTV 120 Query: 121 YIVLDKAEYLRDMEANLLPGFLRLQELADRNVTVLFLSEIVWEKFRPNTGCFEPFVLYFP 180 YIVLDKAEYLRDMEANLLPGFLRLQELADRNVTVLFLSEIVWEKFRPNTGCFEPFVLYFP Sbjct: 121 YIVLDKAEYLRDMEANLLPGFLRLQELADRNVTVLFLSEIVWEKFRPNTGCFEPFVLYFP 180 Query: 181 DYSIGNLQKILSHDHPPEYSADFYAAYINILLGVFYTVCRDLKELRHLAVLNFPKYCEPV 240 DYSIGNLQKILSHDHPPEYSADFYAAYINILLGVFYTVCRDLKELRHLAVLNFPKYCEPV Sbjct: 181 DYSIGNLQKILSHDHPPEYSADFYAAYINILLGVFYTVCRDLKELRHLAVLNFPKYCEPV 240 Query: 241 VKGEASERDTRKLWRNIEPHLKKAMQTVYLREISSSQWEKLQKDDTDPGQLKGLSAHTHV 300 VKGEASERDTRKLWRNIEPHLKKAMQTVYLREISSSQWEKLQKDDTDPGQLKGLSAHTHV Sbjct: 241 VKGEASERDTRKLWRNIEPHLKKAMQTVYLREISSSQWEKLQKDDTDPGQLKGLSAHTHV 300 Query: 301 ELPYYSKFILIAAYLASYNPARTDKRFFLKHHGKIKKTNFLKKHEKTSNHLLGPKPFPLD 360 ELPYYSKFILIAAYLASYNPARTDKRFFLKHHGKIKKTNFLKKHEKTSNHLLGPKPFPLD Sbjct: 301 ELPYYSKFILIAAYLASYNPARTDKRFFLKHHGKIKKTNFLKKHEKTSNHLLGPKPFPLD 360 Query: 361 RLLAILYSIVDSRVAPTANIFSQITSLVTLQLLTLVGHDDQLDGPKYKCTVSLDFIRAIA 420 RLLAILYSIVDSRVAPTANIFSQITSLVTLQLLTLVGHDDQLDGPKYKCTVSLDFIRAIA Sbjct: 361 RLLAILYSIVDSRVAPTANIFSQITSLVTLQLLTLVGHDDQLDGPKYKCTVSLDFIRAIA 420 Query: 421 RTVNFDIIKYLYDFL 435 RTVNFDIIKYLYDFL Sbjct: 421 RTVNFDIIKYLYDFL 435 >5UJ7-E nrPDB Length = 284 Score = 591 bits (1524), Expect = e-169, Method: Compositional matrix adjust. Identities = 284/284 (100%), Positives = 284/284 (100%) Query: 1 MPHLENVVLCRESQVSILQSLFGERHHFSFPSIFIYGHTASGKTYVTQTLLKTLELPHVF 60 MPHLENVVLCRESQVSILQSLFGERHHFSFPSIFIYGHTASGKTYVTQTLLKTLELPHVF Sbjct: 1 MPHLENVVLCRESQVSILQSLFGERHHFSFPSIFIYGHTASGKTYVTQTLLKTLELPHVF 60 Query: 61 VNCVECFTLRLLLEQILNKLNHLSSSEDGCSTEITCETFNDFVRLFKQVTTAENLKDQTV 120 VNCVECFTLRLLLEQILNKLNHLSSSEDGCSTEITCETFNDFVRLFKQVTTAENLKDQTV Sbjct: 61 VNCVECFTLRLLLEQILNKLNHLSSSEDGCSTEITCETFNDFVRLFKQVTTAENLKDQTV 120 Query: 121 YIVLDKAEYLRDMEANLLPGFLRLQELADRNVTVLFLSEIVWEKFRPNTGCFEPFVLYFP 180 YIVLDKAEYLRDMEANLLPGFLRLQELADRNVTVLFLSEIVWEKFRPNTGCFEPFVLYFP Sbjct: 121 YIVLDKAEYLRDMEANLLPGFLRLQELADRNVTVLFLSEIVWEKFRPNTGCFEPFVLYFP 180 Query: 181 DYSIGNLQKILSHDHPPEYSADFYAAYINILLGVFYTVCRDLKELRHLAVLNFPKYCEPV 240 DYSIGNLQKILSHDHPPEYSADFYAAYINILLGVFYTVCRDLKELRHLAVLNFPKYCEPV Sbjct: 181 DYSIGNLQKILSHDHPPEYSADFYAAYINILLGVFYTVCRDLKELRHLAVLNFPKYCEPV 240 Query: 241 VKGEASERDTRKLWRNIEPHLKKAMQTVYLREISSSQWEKLQKD 284 VKGEASERDTRKLWRNIEPHLKKAMQTVYLREISSSQWEKLQKD Sbjct: 241 VKGEASERDTRKLWRNIEPHLKKAMQTVYLREISSSQWEKLQKD 284 >4XGC-E nrPDB Length = 460 Score = 276 bits (705), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 167/467 (35%), Positives = 259/467 (55%), Gaps = 49/467 (10%) Query: 4 LENVVLCRESQVSILQSLFGERHHFSFPS-IFIYGHTASGKTYVTQTLLKTL----ELPH 58 LE + CRE+ + L L G+ ++PS I+++GH+ +GKT +T+ LK + Sbjct: 8 LEPLFPCREAAIETLGELIGDSSE-TYPSAIYLFGHSGTGKTALTRAFLKECGKRQNVRT 66 Query: 59 VFVNCVECFTLRLLLEQILNKLNHLSSSEDGCSTEITCETFNDFVRLFKQVTTAENLKDQ 118 +N +EC+T +++LE +L+ L + + G + ++ + DFV ++ A ++DQ Sbjct: 67 AHLNAIECYTTKIMLEILLDSL----APDQGDALKV--DNMLDFVEQLRR-QAATRVEDQ 119 Query: 119 TVYIVLDKAEYLRDMEANLLPGFLRLQELADRNVTVLFLSEIVWEKFRPNTGCFEPFVLY 178 I +D AE LRDM+AN+LP LRLQEL + N+ V+ LS++ +EKF TG E L+ Sbjct: 120 GFLIAVDNAERLRDMDANVLPVLLRLQELTNLNLCVILLSQLPFEKFYNKTGLSEIVCLH 179 Query: 179 FPDYSIGNLQKILSHDH---------------------PPEYSADFYAAYINILLGVFYT 217 Y+ Q+IL D + DFY Y+N+ L VFY Sbjct: 180 LAQYNKAETQRILGSDFQQVRNQLLEQFAQDKKRLEICQEAVTEDFYNNYLNLFLSVFYK 239 Query: 218 VCRDLKELRHLAVLNFPKYCEPVVKGEASERDTRKLWRNIEPHLKKAMQTVYLREISSSQ 277 CRD+ EL+ A Y EPV+ G D +LWR+I L+ A+ +Y+R Sbjct: 240 ACRDVPELQLTARKCLSTYLEPVLDGTVDATDISRLWRHIAGPLRSALTQIYMR------ 293 Query: 278 WEKLQKDDTDPGQLKGLSAH---THVELPYYSKFILIAAYLASYNPARTDKRFFLKHHGK 334 EK ++ D ++ S +ELPYY+KF+LIAA+LAS+N A+ DKR F+KHHGK Sbjct: 294 IEKPAEEVEDFTAIEDQSVRKLAQSLELPYYAKFLLIAAFLASHNAAKQDKRLFVKHHGK 353 Query: 335 IKK----TNFLKKHEKTSNHLLGPKPFPLDRLLAILYSIVDSRVAPTANIFSQITSLVTL 390 +K N K + + LGPK F +DRLLAI Y+I++ +V T N+ SQI++LV L Sbjct: 354 QRKRMQTVNARAKTTEKMSTTLGPKSFSIDRLLAIFYAILEEKVGLTCNLLSQISTLVHL 413 Query: 391 QLLTLV-GHDDQLDG-PKYKCTVSLDFIRAIARTVNFDIIKYLYDFL 435 LL+ V G + ++G + +CT+ L+F+ I + V F++ +YL DF+ Sbjct: 414 NLLSFVSGEQNIMEGSARLQCTIGLEFVLQIGKVVGFNVRQYLCDFM 460 >5V8F-E nrPDB Length = 479 Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 112/490 (22%), Positives = 202/490 (41%), Gaps = 85/490 (17%) Query: 8 VLCRESQVSILQSLFGERHHFSFPSIFIYGHTASGKTYVTQTLLKT-LELPHVFVNCVEC 66 V RE Q + L S + ++ + G++ +GKTY + L V++ VE Sbjct: 8 VAFREYQTNCLASYISADPDITPSNLILQGYSGTGKTYTLKKYFNANPNLHAVWLEPVEL 67 Query: 67 FTLRLLLEQILNKL---------NHLSSSEDGCSTEITCETFNDFVRLFKQVTTAENLKD 117 + + LL+ I + N ++ D E E F L E+L++ Sbjct: 68 VSWKPLLQAIARTVQYKLKTLYPNIPTTDYDPLQVE---EPFLLVKTLHNIFVQYESLQE 124 Query: 118 QT-VYIVLDKAEYLRDMEANLLPGFLRLQEL--ADRNVTVLFLSEIVWEKF--RPNTGCF 172 +T ++++LD + L+D++A L +++L EL D + + F+ ++ F R +T C Sbjct: 125 KTCLFLILDGFDSLQDLDAALFNKYIKLNELLPKDSKINIKFIYTMLETSFLQRYSTHCI 184 Query: 173 EPFVLYFPDYSIGNLQKILSHDHPPEYSAD----------------------FYAAYINI 210 P V+ FP Y++ + IL E D A +I++ Sbjct: 185 -PTVM-FPRYNVDEVSTILVMSRCGELMEDSCLRKRIIEEQITDCTDDQFQNVAANFIHL 242 Query: 211 LLGVFYT-VCRDLKELRHLAVLNFPKYCEPVVKGEASE-----RDTRKLWRNIEPHLKKA 264 ++ F++ D+ L L +PKY + K E + KL+ + + +L + Sbjct: 243 IVQAFHSYTGNDIFALNDLIDFKWPKYVSRITKENIFEPLALYKSAIKLFLSTDDNLSEN 302 Query: 265 MQTVYLREISSSQWEKLQKDDTDPGQLKGLSAHTHVELPYYSKFILIAAYLASYNPARTD 324 Q +DD + Q LS SK++LIA+Y+ SY R D Sbjct: 303 GQ--------GESAITTNRDDLENSQTYDLSI--------ISKYLLIASYICSYLEPRYD 346 Query: 325 KRFFLKHHGKIK-KTNFLKKHEKTSN-HLLGPKPFPLDRLLAILYSIV------------ 370 F + I+ + + ++ +K N L P F ++RLLAI +I Sbjct: 347 ASIFSRKTRIIQGRAAYGRRKKKEVNPRYLQPSLFAIERLLAIFQAIFPIQGKAESGSLS 406 Query: 371 ----DSRVAPTANIFSQITSLVTLQLL-TLVGHDDQLDGPK--YKCTVSLDFIRAIARTV 423 +S + +F ++ L TL+L+ T + + PK +K V + I+ I+ +V Sbjct: 407 ALREESLMKANIEVFQNLSELHTLKLIATTMNKNIDYLSPKVRWKVNVPWEIIKEISESV 466 Query: 424 NFDIIKYLYD 433 +F+I Y D Sbjct: 467 HFNISDYFSD 476 >2QBY-A nrPDB Length = 386 Score = 36.2 bits (82), Expect = 0.025, Method: Compositional matrix adjust. Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 14/88 (15%) Query: 1 MPHLENVVLCRESQVSILQSLFGERHHFSFPS-IFIYGHTASGKTYVTQTLLKTL----- 54 +PH RE Q+ + S+ + P+ IFIYG T +GKT V + +L L Sbjct: 22 LPH-------REDQIRKIASILAPLYREEKPNNIFIYGLTGTGKTAVVKFVLSKLHKKFL 74 Query: 55 -ELPHVFVNCVECFTLRLLLEQILNKLN 81 + HV++N + T +L +L L+ Sbjct: 75 GKFKHVYINTRQIDTPYRVLADLLESLD 102 >1UM8-A nrPDB Length = 376 Score = 33.1 bits (74), Expect = 0.26, Method: Compositional matrix adjust. Identities = 19/60 (31%), Positives = 28/60 (46%) Query: 29 SFPSIFIYGHTASGKTYVTQTLLKTLELPHVFVNCVECFTLRLLLEQILNKLNHLSSSED 88 S +I + G T SGKT + QTL K L++P + + E + N L L + D Sbjct: 71 SKSNILLIGPTGSGKTLMAQTLAKHLDIPIAISDATSLTEAGYVGEDVENILTRLLQASD 130 >5EVL-A nrPDB Length = 373 Score = 32.3 bits (72), Expect = 0.36, Method: Compositional matrix adjust. Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 6/50 (12%) Query: 23 GERHHFSFPSIFIYGHTAS---GKTY---VTQTLLKTLELPHVFVNCVEC 66 GER +S PSI ++GH A+ G+ + + + LL L L H F++ E Sbjct: 149 GERRLYSNPSIGLFGHLAARSLGQPFDQAMERGLLPKLGLSHTFIHVPEA 198 >5K3J-A nrPDB Length = 674 Score = 32.3 bits (72), Expect = 0.46, Method: Compositional matrix adjust. Identities = 30/132 (22%), Positives = 55/132 (41%), Gaps = 8/132 (6%) Query: 8 VLCRESQVSILQSLFG-ERHHFSFPSIF--IYGHTASGKTYVTQTLLKTLELPHVFVNCV 64 V+ E+ I Q+ H +S S +YG G TY + ++ L+L V V Sbjct: 391 VVAHETGEGIEQARMACGGHGYSMASYISVVYGIAIGGCTYAGENMVMLLQLARYLVKSV 450 Query: 65 ECFTLRLLLEQILNKLNHLSSSEDGCSTEITCETFNDFVRLFKQVTTAENLKDQTVYIVL 124 E L+ KL ++S S E + N +V++F+ + + K ++ L Sbjct: 451 E-----LIKAGKAKKLGPVASYLADKSDETDLTSLNGYVKMFENMARRQAWKATEKFLKL 505 Query: 125 DKAEYLRDMEAN 136 ++ R++ N Sbjct: 506 MESGESREVAWN 517 >3B6V-A nrPDB Length = 395 Score = 31.6 bits (70), Expect = 0.70, Method: Compositional matrix adjust. Identities = 18/50 (36%), Positives = 22/50 (44%), Gaps = 8/50 (16%) Query: 16 SILQSLFGERHHFSFPSIFIYGHTASGKTYVTQTLLKTLELPHVFVNCVE 65 S+LQ G ++F YG T +GKTY Q EL V N E Sbjct: 96 SVLQGFNG--------TVFAYGQTGTGKTYTMQGTWVEPELRGVIPNAFE 137 >5CGW-A nrPDB Length = 362 Score = 31.2 bits (69), Expect = 0.95, Method: Compositional matrix adjust. Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 6/50 (12%) Query: 23 GERHHFSFPSIFIYGHTAS---GKTY---VTQTLLKTLELPHVFVNCVEC 66 G FS PSI ++GH A+ G+ + ++QTLL L L H ++ E Sbjct: 146 GTHRQFSNPSIGLFGHLAANSLGQPFEQLMSQTLLPKLGLHHTYIQVPES 195 >4WBG-A nrPDB Length = 380 Score = 29.6 bits (65), Expect = 2.5, Method: Compositional matrix adjust. Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 6/47 (12%) Query: 23 GERHHFSFPSIFIYGHTASGK------TYVTQTLLKTLELPHVFVNC 63 G +S PSI ++GH A+ + QTLL L + H +VN Sbjct: 167 GSHRQYSNPSIGLFGHLAASSLKQPFAQLMEQTLLPGLGMHHTYVNV 213 >6FM7-A nrPDB Length = 382 Score = 29.6 bits (65), Expect = 2.5, Method: Compositional matrix adjust. Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 6/50 (12%) Query: 23 GERHHFSFPSIFIYGHTASG------KTYVTQTLLKTLELPHVFVNCVEC 66 G +S PSI ++GH A+ + ++QTLL L+L H ++ + Sbjct: 166 GTHREYSNPSIGLFGHLAASTLGQPFRQLMSQTLLPKLDLQHTYLEVPDA 215 >4I5O-A nrPDB Length = 363 Score = 29.6 bits (65), Expect = 2.8, Method: Compositional matrix adjust. Identities = 14/52 (26%), Positives = 25/52 (48%) Query: 32 SIFIYGHTASGKTYVTQTLLKTLELPHVFVNCVECFTLRLLLEQILNKLNHL 83 +I + G T SGKT + +TL + L++P + + E + N + L Sbjct: 53 NILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKL 104 >2QZ6-A nrPDB Length = 358 Score = 29.6 bits (65), Expect = 2.9, Method: Compositional matrix adjust. Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 6/50 (12%) Query: 23 GERHHFSFPSIFIYGHTAS---GKTY---VTQTLLKTLELPHVFVNCVEC 66 G + +S PSI ++GH A+ G+ + + QT+L L L H F++ E Sbjct: 141 GTQRLYSNPSIGLFGHLAAQSLGQPFEKLMEQTVLPKLGLKHTFISVPET 190 >4GEW-A nrPDB Length = 362 Score = 28.5 bits (62), Expect = 6.6, Method: Compositional matrix adjust. Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 12/75 (16%) Query: 109 VTTAENLKDQTVYIV------LDKAEYLRDMEA------NLLPGFLRLQELADRNVTVLF 156 V TAE+LK V ++ LD L M+A N+ P L LQE+ DR++ + Sbjct: 109 VMTAEDLKGFEVSVMSWNIDGLDGRSLLTRMKAVAHIVKNVNPDILFLQEVVDRDLAPID 168 Query: 157 LSEIVWEKFRPNTGC 171 + +++ + N GC Sbjct: 169 KLQSLYKIYYSNKGC 183 >1BCC-F nrPDB Length = 109 Score = 28.1 bits (61), Expect = 8.0, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 29/63 (46%), Gaps = 1/63 (1%) Query: 115 LKDQTVYIVLDKAEYLRDMEANLLPG-FLRLQELADRNVTVLFLSEIVWEKFRPNTGCFE 173 ++D T+Y D E +R + NL R++ D N+ L + W K+ + E Sbjct: 32 MRDDTIYENDDVKEAIRRLPENLYDDRMFRIKRALDLNMRQQILPKEQWTKYEEDVPYLE 91 Query: 174 PFV 176 P++ Sbjct: 92 PYL 94 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 5UJM-E nrPDB 628 e-180 4XGC-E nrPDB 517 e-147 5V8F-E nrPDB 440 e-124 5UJ7-E nrPDB 408 e-114 Sequences not found previously or not previously below threshold: 2QBY-A nrPDB 49 6e-06 1FNN-A nrPDB 39 0.006 2V1U-A nrPDB 38 0.008 5B16-A nrPDB 35 0.083 1OFI-A nrPDB 35 0.083 3B6V-A nrPDB 34 0.12 1IM2-A nrPDB 33 0.28 1E94-E nrPDB 33 0.30 2QEN-A nrPDB 32 0.38 2QBY-B nrPDB 32 0.61 4TRK-A nrPDB 31 1.1 5V8F-A nrPDB 29 3.4 5G4G-A nrPDB 29 5.0 3B6U-A nrPDB 29 5.2 3VAA-A nrPDB 28 5.4 4WNR-A nrPDB 28 6.0 5VC7-A nrPDB 28 6.5 >5UJM-E nrPDB Length = 435 Score = 628 bits (1619), Expect = e-180, Method: Composition-based stats. Identities = 435/435 (100%), Positives = 435/435 (100%) Query: 1 MPHLENVVLCRESQVSILQSLFGERHHFSFPSIFIYGHTASGKTYVTQTLLKTLELPHVF 60 MPHLENVVLCRESQVSILQSLFGERHHFSFPSIFIYGHTASGKTYVTQTLLKTLELPHVF Sbjct: 1 MPHLENVVLCRESQVSILQSLFGERHHFSFPSIFIYGHTASGKTYVTQTLLKTLELPHVF 60 Query: 61 VNCVECFTLRLLLEQILNKLNHLSSSEDGCSTEITCETFNDFVRLFKQVTTAENLKDQTV 120 VNCVECFTLRLLLEQILNKLNHLSSSEDGCSTEITCETFNDFVRLFKQVTTAENLKDQTV Sbjct: 61 VNCVECFTLRLLLEQILNKLNHLSSSEDGCSTEITCETFNDFVRLFKQVTTAENLKDQTV 120 Query: 121 YIVLDKAEYLRDMEANLLPGFLRLQELADRNVTVLFLSEIVWEKFRPNTGCFEPFVLYFP 180 YIVLDKAEYLRDMEANLLPGFLRLQELADRNVTVLFLSEIVWEKFRPNTGCFEPFVLYFP Sbjct: 121 YIVLDKAEYLRDMEANLLPGFLRLQELADRNVTVLFLSEIVWEKFRPNTGCFEPFVLYFP 180 Query: 181 DYSIGNLQKILSHDHPPEYSADFYAAYINILLGVFYTVCRDLKELRHLAVLNFPKYCEPV 240 DYSIGNLQKILSHDHPPEYSADFYAAYINILLGVFYTVCRDLKELRHLAVLNFPKYCEPV Sbjct: 181 DYSIGNLQKILSHDHPPEYSADFYAAYINILLGVFYTVCRDLKELRHLAVLNFPKYCEPV 240 Query: 241 VKGEASERDTRKLWRNIEPHLKKAMQTVYLREISSSQWEKLQKDDTDPGQLKGLSAHTHV 300 VKGEASERDTRKLWRNIEPHLKKAMQTVYLREISSSQWEKLQKDDTDPGQLKGLSAHTHV Sbjct: 241 VKGEASERDTRKLWRNIEPHLKKAMQTVYLREISSSQWEKLQKDDTDPGQLKGLSAHTHV 300 Query: 301 ELPYYSKFILIAAYLASYNPARTDKRFFLKHHGKIKKTNFLKKHEKTSNHLLGPKPFPLD 360 ELPYYSKFILIAAYLASYNPARTDKRFFLKHHGKIKKTNFLKKHEKTSNHLLGPKPFPLD Sbjct: 301 ELPYYSKFILIAAYLASYNPARTDKRFFLKHHGKIKKTNFLKKHEKTSNHLLGPKPFPLD 360 Query: 361 RLLAILYSIVDSRVAPTANIFSQITSLVTLQLLTLVGHDDQLDGPKYKCTVSLDFIRAIA 420 RLLAILYSIVDSRVAPTANIFSQITSLVTLQLLTLVGHDDQLDGPKYKCTVSLDFIRAIA Sbjct: 361 RLLAILYSIVDSRVAPTANIFSQITSLVTLQLLTLVGHDDQLDGPKYKCTVSLDFIRAIA 420 Query: 421 RTVNFDIIKYLYDFL 435 RTVNFDIIKYLYDFL Sbjct: 421 RTVNFDIIKYLYDFL 435 >4XGC-E nrPDB Length = 460 Score = 517 bits (1332), Expect = e-147, Method: Composition-based stats. Identities = 165/466 (35%), Positives = 256/466 (54%), Gaps = 47/466 (10%) Query: 4 LENVVLCRESQVSILQSLFGERHHFSFPSIFIYGHTASGKTYVTQTLLKTL----ELPHV 59 LE + CRE+ + L L G+ +I+++GH+ +GKT +T+ LK + Sbjct: 8 LEPLFPCREAAIETLGELIGDSSETYPSAIYLFGHSGTGKTALTRAFLKECGKRQNVRTA 67 Query: 60 FVNCVECFTLRLLLEQILNKLNHLSSSEDGCSTEITCETFNDFVRLFKQVTTAENLKDQT 119 +N +EC+T +++LE +L+ L + + G + ++ + DFV ++ A ++DQ Sbjct: 68 HLNAIECYTTKIMLEILLDSL----APDQGDALKV--DNMLDFVEQLRR-QAATRVEDQG 120 Query: 120 VYIVLDKAEYLRDMEANLLPGFLRLQELADRNVTVLFLSEIVWEKFRPNTGCFEPFVLYF 179 I +D AE LRDM+AN+LP LRLQEL + N+ V+ LS++ +EKF TG E L+ Sbjct: 121 FLIAVDNAERLRDMDANVLPVLLRLQELTNLNLCVILLSQLPFEKFYNKTGLSEIVCLHL 180 Query: 180 PDYSIGNLQKILSHDH---------------------PPEYSADFYAAYINILLGVFYTV 218 Y+ Q+IL D + DFY Y+N+ L VFY Sbjct: 181 AQYNKAETQRILGSDFQQVRNQLLEQFAQDKKRLEICQEAVTEDFYNNYLNLFLSVFYKA 240 Query: 219 CRDLKELRHLAVLNFPKYCEPVVKGEASERDTRKLWRNIEPHLKKAMQTVYLREISSSQW 278 CRD+ EL+ A Y EPV+ G D +LWR+I L+ A+ +Y+R Sbjct: 241 CRDVPELQLTARKCLSTYLEPVLDGTVDATDISRLWRHIAGPLRSALTQIYMR------I 294 Query: 279 EKLQKDDTDPGQLKGLSAH---THVELPYYSKFILIAAYLASYNPARTDKRFFLKHHGKI 335 EK ++ D ++ S +ELPYY+KF+LIAA+LAS+N A+ DKR F+KHHGK Sbjct: 295 EKPAEEVEDFTAIEDQSVRKLAQSLELPYYAKFLLIAAFLASHNAAKQDKRLFVKHHGKQ 354 Query: 336 KK----TNFLKKHEKTSNHLLGPKPFPLDRLLAILYSIVDSRVAPTANIFSQITSLVTLQ 391 +K N K + + LGPK F +DRLLAI Y+I++ +V T N+ SQI++LV L Sbjct: 355 RKRMQTVNARAKTTEKMSTTLGPKSFSIDRLLAIFYAILEEKVGLTCNLLSQISTLVHLN 414 Query: 392 LLTLV-GHDDQLDG-PKYKCTVSLDFIRAIARTVNFDIIKYLYDFL 435 LL+ V G + ++G + +CT+ L+F+ I + V F++ +YL DF+ Sbjct: 415 LLSFVSGEQNIMEGSARLQCTIGLEFVLQIGKVVGFNVRQYLCDFM 460 >5V8F-E nrPDB Length = 479 Score = 440 bits (1132), Expect = e-124, Method: Composition-based stats. Identities = 112/492 (22%), Positives = 202/492 (41%), Gaps = 85/492 (17%) Query: 6 NVVLCRESQVSILQSLFGERHHFSFPSIFIYGHTASGKTYVTQTLLKT-LELPHVFVNCV 64 V RE Q + L S + ++ + G++ +GKTY + L V++ V Sbjct: 6 PEVAFREYQTNCLASYISADPDITPSNLILQGYSGTGKTYTLKKYFNANPNLHAVWLEPV 65 Query: 65 ECFTLRLLLEQILNKL---------NHLSSSEDGCSTEITCETFNDFVRLFKQVTTAENL 115 E + + LL+ I + N ++ D E E F L E+L Sbjct: 66 ELVSWKPLLQAIARTVQYKLKTLYPNIPTTDYDPLQVE---EPFLLVKTLHNIFVQYESL 122 Query: 116 KDQT-VYIVLDKAEYLRDMEANLLPGFLRLQEL--ADRNVTVLFLSEIVWEKF--RPNTG 170 +++T ++++LD + L+D++A L +++L EL D + + F+ ++ F R +T Sbjct: 123 QEKTCLFLILDGFDSLQDLDAALFNKYIKLNELLPKDSKINIKFIYTMLETSFLQRYSTH 182 Query: 171 CFEPFVLYFPDYSIGNLQKILSHDHPPEYSAD----------------------FYAAYI 208 C P V+ FP Y++ + IL E D A +I Sbjct: 183 CI-PTVM-FPRYNVDEVSTILVMSRCGELMEDSCLRKRIIEEQITDCTDDQFQNVAANFI 240 Query: 209 NILLGVFYT-VCRDLKELRHLAVLNFPKYCEPVVKGEASE-----RDTRKLWRNIEPHLK 262 ++++ F++ D+ L L +PKY + K E + KL+ + + +L Sbjct: 241 HLIVQAFHSYTGNDIFALNDLIDFKWPKYVSRITKENIFEPLALYKSAIKLFLSTDDNLS 300 Query: 263 KAMQTVYLREISSSQWEKLQKDDTDPGQLKGLSAHTHVELPYYSKFILIAAYLASYNPAR 322 + Q +DD + Q LS SK++LIA+Y+ SY R Sbjct: 301 ENGQ--------GESAITTNRDDLENSQTYDLSI--------ISKYLLIASYICSYLEPR 344 Query: 323 TDKRFFLKHHGKIK-KTNFLKKHEKTSN-HLLGPKPFPLDRLLAILYSIV---------- 370 D F + I+ + + ++ +K N L P F ++RLLAI +I Sbjct: 345 YDASIFSRKTRIIQGRAAYGRRKKKEVNPRYLQPSLFAIERLLAIFQAIFPIQGKAESGS 404 Query: 371 ------DSRVAPTANIFSQITSLVTLQLL-TLVGHDDQLDGPK--YKCTVSLDFIRAIAR 421 +S + +F ++ L TL+L+ T + + PK +K V + I+ I+ Sbjct: 405 LSALREESLMKANIEVFQNLSELHTLKLIATTMNKNIDYLSPKVRWKVNVPWEIIKEISE 464 Query: 422 TVNFDIIKYLYD 433 +V+F+I Y D Sbjct: 465 SVHFNISDYFSD 476 >5UJ7-E nrPDB Length = 284 Score = 408 bits (1048), Expect = e-114, Method: Composition-based stats. Identities = 284/284 (100%), Positives = 284/284 (100%) Query: 1 MPHLENVVLCRESQVSILQSLFGERHHFSFPSIFIYGHTASGKTYVTQTLLKTLELPHVF 60 MPHLENVVLCRESQVSILQSLFGERHHFSFPSIFIYGHTASGKTYVTQTLLKTLELPHVF Sbjct: 1 MPHLENVVLCRESQVSILQSLFGERHHFSFPSIFIYGHTASGKTYVTQTLLKTLELPHVF 60 Query: 61 VNCVECFTLRLLLEQILNKLNHLSSSEDGCSTEITCETFNDFVRLFKQVTTAENLKDQTV 120 VNCVECFTLRLLLEQILNKLNHLSSSEDGCSTEITCETFNDFVRLFKQVTTAENLKDQTV Sbjct: 61 VNCVECFTLRLLLEQILNKLNHLSSSEDGCSTEITCETFNDFVRLFKQVTTAENLKDQTV 120 Query: 121 YIVLDKAEYLRDMEANLLPGFLRLQELADRNVTVLFLSEIVWEKFRPNTGCFEPFVLYFP 180 YIVLDKAEYLRDMEANLLPGFLRLQELADRNVTVLFLSEIVWEKFRPNTGCFEPFVLYFP Sbjct: 121 YIVLDKAEYLRDMEANLLPGFLRLQELADRNVTVLFLSEIVWEKFRPNTGCFEPFVLYFP 180 Query: 181 DYSIGNLQKILSHDHPPEYSADFYAAYINILLGVFYTVCRDLKELRHLAVLNFPKYCEPV 240 DYSIGNLQKILSHDHPPEYSADFYAAYINILLGVFYTVCRDLKELRHLAVLNFPKYCEPV Sbjct: 181 DYSIGNLQKILSHDHPPEYSADFYAAYINILLGVFYTVCRDLKELRHLAVLNFPKYCEPV 240 Query: 241 VKGEASERDTRKLWRNIEPHLKKAMQTVYLREISSSQWEKLQKD 284 VKGEASERDTRKLWRNIEPHLKKAMQTVYLREISSSQWEKLQKD Sbjct: 241 VKGEASERDTRKLWRNIEPHLKKAMQTVYLREISSSQWEKLQKD 284 >2QBY-A nrPDB Length = 386 Score = 48.5 bits (114), Expect = 6e-06, Method: Composition-based stats. Identities = 47/213 (22%), Positives = 85/213 (39%), Gaps = 31/213 (14%) Query: 8 VLCRESQVSILQSLFGERH-HFSFPSIFIYGHTASGKTYVTQTLLKTLE------LPHVF 60 + RE Q+ + S+ + +IFIYG T +GKT V + +L L HV+ Sbjct: 22 LPHREDQIRKIASILAPLYREEKPNNIFIYGLTGTGKTAVVKFVLSKLHKKFLGKFKHVY 81 Query: 61 VNCVECFTLRLLLEQILNKLNHLSSSEDGCSTEITCETFNDFVRLFKQVTTAENLKDQTV 120 +N + T +L +L L+ G S L++++ A V Sbjct: 82 INTRQIDTPYRVLADLLESLDV-KVPFTGLSI----------AELYRRLVKAVRDYGSQV 130 Query: 121 YIVLDKAE-YLRDMEANLLPGFLRLQELADRNVTVLFLSEIVWEKF------RPNTGCFE 173 IVLD+ + +++ ++L R+ +++ + F+ KF R + E Sbjct: 131 VIVLDEIDAFVKKYNDDILYKLSRINSEVNKS-KISFIGITNDVKFVDLLDPRVKSSLSE 189 Query: 174 PFVLYFPDYSIGNLQKILS----HDHPPEYSAD 202 ++ FP Y+ L+ IL+ P D Sbjct: 190 EEII-FPPYNAEELEDILTKRAQMAFKPGVLPD 221 >1FNN-A nrPDB Length = 389 Score = 38.5 bits (88), Expect = 0.006, Method: Composition-based stats. Identities = 53/300 (17%), Positives = 101/300 (33%), Gaps = 54/300 (18%) Query: 25 RHHFSFPSIFIYGHTASGKTYVTQT----LLKTLELPHVFVNCVECFTLRLLLEQILNKL 80 +P + G +GKT + V++N ++ +I L Sbjct: 39 NPGHHYPRATLLGRPGTGKTVTLRKLWELYKDKTTARFVYINGFIYRNFTAIIGEIARSL 98 Query: 81 NHLSSSEDGCSTEITCETFNDFVRLFKQVTTAENLKDQTVYIVLDKAEYLRDMEANLLPG 140 N G S + + +D +++VLD A ++ ++L Sbjct: 99 NIPF-PRRGLSRD----------EFLALLVEHLRERDLYMFLVLDDA---FNLAPDILST 144 Query: 141 FLRLQELADR------NVTVLFLSEIVWEKFRPNT-GCFEPFVLYFPDYSIGNLQKILSH 193 F+RL + AD+ + ++ ++ V P+T G +V+ F Y+ + IL Sbjct: 145 FIRLGQEADKLGAFRIALVIVGHNDAVLNNLDPSTRGIMGKYVIRFSPYTKDQIFDILLD 204 Query: 194 DHPPEYSADFYAAYINILLGVFYTVCRDLKELRHLAVLNFPKYCEPVVKGEASERDTRK- 252 + Y+ I L+ +A + + P+ R Sbjct: 205 RAKAGLAEGSYSEDI----------------LQMIADITGAQ--TPLDTNRGDARLAIDI 246 Query: 253 LWRNIEPHLKKAMQTVYLREISSSQWEKLQKDDTDPGQLKGLSAHTHVELPYYSKFILIA 312 L+R+ A Q + I+ K K+ L G+S + LP + K L+A Sbjct: 247 LYRS-----AYAAQQNGRKHIAPEDVRKSSKEV-----LFGISEEVLIGLPLHEKLFLLA 296 >2V1U-A nrPDB Length = 387 Score = 38.1 bits (87), Expect = 0.008, Method: Composition-based stats. Identities = 46/214 (21%), Positives = 78/214 (36%), Gaps = 28/214 (13%) Query: 3 HLENVVLCRESQVSILQSLFG-ERHHFSFPSIFIYGHTASGKTYVTQTLLKTLELPHVFV 61 ++ +V+ RE+++ L + + +YG T +GKT V + +L+ LE Sbjct: 16 YVPDVLPHREAELRRLAEVLAPALRGEKPSNALLYGLTGTGKTAVARLVLRRLEARAS-- 73 Query: 62 NCVECFTLRLLLEQILNKLNHLSSSEDGCSTEITCETFNDFVRLFKQVTTAENLKDQ--- 118 +L +L++ I H + S E L + Sbjct: 74 ------SLGVLVKPIYVNARHRETPYRVASAIAEAVGVRVPFTGLSVGEVYERLVKRLSR 127 Query: 119 ---TVYIVLDKAEYL--RDMEANLLPGFLRL-QELADRN-------VTVLFLSEIVWEKF 165 IVLD+ ++L R +LL R+ QEL DR L E + + Sbjct: 128 LRGIYIIVLDEIDFLPKRPGGQDLLYRITRINQELGDRVWVSLVGITNSLGFVENLEPRV 187 Query: 166 RPNTGCFEPFVLYFPDYSIGNLQKILSHDHPPEY 199 + + G E L FP Y+ L+ IL + Sbjct: 188 KSSLGEVE---LVFPPYTAPQLRDILETRAEEAF 218 >5B16-A nrPDB Length = 986 Score = 34.7 bits (78), Expect = 0.083, Method: Composition-based stats. Identities = 18/120 (15%), Positives = 38/120 (31%), Gaps = 18/120 (15%) Query: 11 RESQVSILQSLFGERHHFSFPSIFIYGHTASGKTYVTQTLLKTLELPHVFVNCVECFTLR 70 R + + Q+L G +++ G K + L +L V++N + L Sbjct: 650 RHAMANCFQALIGA--------VYLEGSLEEAKQLFGRLLFNDPDLREVWLN----YPLH 697 Query: 71 LLLEQILNKLNHLSSSEDGCSTEITCETFNDFVRLFKQVTTAENLKDQTVYIVLDKAEYL 130 L +L ++ T + +F + T L + + +L Sbjct: 698 PL------QLQEPNTDRQLIETSPVLQKLTEFEEAIGVIFTHVRLLARAFTLRTVGFNHL 751 >1OFI-A nrPDB Length = 310 Score = 34.7 bits (78), Expect = 0.083, Method: Composition-based stats. Identities = 16/85 (18%), Positives = 35/85 (41%), Gaps = 1/85 (1%) Query: 25 RHHFSFPSIFIYGHTASGKTYVTQTLLKTLELPHVFVNCVECFTLRLLLEQILNKLNHLS 84 RH + +I + G T GKT + + L K P + V + FT + + ++ + Sbjct: 45 RHEVTPKNILMIGPTGVGKTEIARRLAKLANAPFIKVEATK-FTEVGYVGKEVDSIIRDL 103 Query: 85 SSEDGCSTEITCETFNDFVRLFKQV 109 + G + + + F+ ++ Sbjct: 104 TDSAGGAIDAVEQNGIVFIDEIDKI 128 >3B6V-A nrPDB Length = 395 Score = 34.3 bits (77), Expect = 0.12, Method: Composition-based stats. Identities = 14/34 (41%), Positives = 17/34 (50%) Query: 32 SIFIYGHTASGKTYVTQTLLKTLELPHVFVNCVE 65 ++F YG T +GKTY Q EL V N E Sbjct: 104 TVFAYGQTGTGKTYTMQGTWVEPELRGVIPNAFE 137 >1IM2-A nrPDB Length = 444 Score = 33.1 bits (74), Expect = 0.28, Method: Composition-based stats. Identities = 12/41 (29%), Positives = 19/41 (46%) Query: 25 RHHFSFPSIFIYGHTASGKTYVTQTLLKTLELPHVFVNCVE 65 RH + +I + G T GKT + + L K P + V + Sbjct: 45 RHEVTPKNILMIGPTGVGKTEIARRLAKLANAPFIKVEATK 85 >1E94-E nrPDB Length = 449 Score = 32.7 bits (73), Expect = 0.30, Method: Composition-based stats. Identities = 12/41 (29%), Positives = 19/41 (46%) Query: 25 RHHFSFPSIFIYGHTASGKTYVTQTLLKTLELPHVFVNCVE 65 RH + +I + G T GKT + + L K P + V + Sbjct: 51 RHEVTPKNILMIGPTGVGKTEIARRLAKLANAPFIKVEATK 91 >2QEN-A nrPDB Length = 350 Score = 32.3 bits (72), Expect = 0.38, Method: Composition-based stats. Identities = 23/119 (19%), Positives = 44/119 (36%), Gaps = 13/119 (10%) Query: 24 ERHHFSFPSIFIYGHTASGKTYVTQTLLKTLELPHVFVNCVECFTLR--LLLEQILNKLN 81 E ++P + G GK+ + + L E P + ++C E + R + E+++ +L Sbjct: 25 EESLENYPLTLLLGIRRVGKSSLLRAFLN--ERPGILIDCRELYAERGHITREELIKELQ 82 Query: 82 HLSSSEDGCSTEITCETFNDFVRL----FKQVTTAENLKDQT-----VYIVLDKAEYLR 131 S ++ F+ L L D + D+A+YLR Sbjct: 83 STISPFQKFQSKFKISLNLKFLTLEPRKLSLREVFRELNDLGEELGEFIVAFDEAQYLR 141 >2QBY-B nrPDB Length = 384 Score = 32.0 bits (71), Expect = 0.61, Method: Composition-based stats. Identities = 19/80 (23%), Positives = 37/80 (46%), Gaps = 13/80 (16%) Query: 25 RHHFSFPSIFIYGHTASGKTYVTQTLLKTLE-----------LPHVFVNCVEC-FTLRLL 72 ++ F ++F+ G T +GKT+V++ + +E + +VNC E T + + Sbjct: 41 KNEVKFSNLFL-GLTGTGKTFVSKYIFNEIEEVKKEDEEYKDVKQAYVNCREVGGTPQAV 99 Query: 73 LEQILNKLNHLSSSEDGCST 92 L + KL S + G + Sbjct: 100 LSSLAGKLTGFSVPKHGINL 119 >4TRK-A nrPDB Length = 291 Score = 30.8 bits (68), Expect = 1.1, Method: Composition-based stats. Identities = 27/151 (17%), Positives = 57/151 (37%), Gaps = 24/151 (15%) Query: 250 TRKLWRNIEPHLKKAMQTVYLREISSSQWEKLQKDDT-----------DPGQLKGLSAHT 298 K + L+ A+Q YLRE + ++K ++D D G++ +S + Sbjct: 81 AAKRVSSTFDGLRDAIQQGYLREFAIVFYKKPNEEDINEVFAFRFAYGDEGEIF-VSLNN 139 Query: 299 HVELPYYSKFILIAAYLASYNPARTDKRFFLKHHGKIKK---------TNFLKKHEKTSN 349 ++ S+ +L A ++ + N + K H IKK +F + + + Sbjct: 140 GIDTNESSQELLQAKFVDTDNTKQMFASTIKKLHRCIKKMEPLPQGSDASFRVSYTEKAP 199 Query: 350 HLLGPKPFPLDRLLAILYSIVDSRVAPTANI 380 P+ + L + Y++ + I Sbjct: 200 KDYTPEGYLLS---PMFYTLNQDIRKASIGI 227 >5V8F-A nrPDB Length = 913 Score = 29.3 bits (64), Expect = 3.4, Method: Composition-based stats. Identities = 28/197 (14%), Positives = 74/197 (37%), Gaps = 12/197 (6%) Query: 3 HLENVVLCRESQ-VSILQSLFGERHHFSFPSIFIYGHTASGKTYVTQTLLKTLELPHVFV 61 + ++ + RE++ SI S + S +I++ G GKT + ++K L Sbjct: 444 NFQDYLPARENEFASIYLSAYSAIESDSATTIYVAGTPGVGKTLTVREVVKELLSSSAQR 503 Query: 62 NCVECFTLRLLLEQILNKLNHLSSSEDGCSTEITCETFNDFVRLFKQVTTAENL---KDQ 118 + L +E K+ + + +++ E + + + K + Sbjct: 504 EIPDF----LYVEINGLKMVKPTDCYETLWNKVSGERLTWAASMESLEFYFKRVPKNKKK 559 Query: 119 TVYIVLDKAEYLRDMEANLLPGFLRLQELADRNVTVLFLS---EIVWEKFRPN-TGCFEP 174 T+ ++LD+ + + +++ F + + V+ ++ ++ + T Sbjct: 560 TIVVLLDELDAMVTKSQDIMYNFFNWTTYENAKLIVIAVANTMDLPERQLGNKITSRIGF 619 Query: 175 FVLYFPDYSIGNLQKIL 191 + F Y+ L+ I+ Sbjct: 620 TRIMFTGYTHEELKNII 636 >5G4G-A nrPDB Length = 721 Score = 28.9 bits (63), Expect = 5.0, Method: Composition-based stats. Identities = 47/298 (15%), Positives = 96/298 (32%), Gaps = 46/298 (15%) Query: 24 ERHHFSFPS-IFIYGHTASGKTYVTQTLLKTLELPHVFVNCVECFT---------LRLLL 73 ER + P + +YG +GKT + + + + +N E + LR + Sbjct: 212 ERLGITPPKGVILYGPPGTGKTLIARAVANESGANFLSINGPEIMSKYYGQSEQKLREIF 271 Query: 74 EQILNKLNHLSSSEDGCSTEITCETFNDFVR---LFKQVTTAENLKDQTVYIVLDKAEYL 130 + + ++ S E V + + +T + +K++ IV+ + Sbjct: 272 SKAEETAPSIIFIDEIDSIAPKREEVQGEVERRVVAQLLTLMDGMKERGHVIVIGATNRI 331 Query: 131 RDMEANLLPGFLRLQELADRNVTVLFLSEIVWEKFRPNTGCFEPFVLYFPDYS-IGNLQK 189 ++ LR DR + + PD + + Sbjct: 332 DAIDPA-----LRRPGRFDREIEI-----------------------GVPDRNGRKEILM 363 Query: 190 ILSHDHPPEYSADFYAAYINILLGVFYT-VCRDLKEL-RHLAVLNFPKYCEPVVKGEASE 247 I + + P S + ++ + Y V DL L R A+ +Y + + Sbjct: 364 IHTRNMPLGMSEEEKNKFLEEMADYTYGFVGADLAALVRESAMNALRRYLPEIDLDKPIP 423 Query: 248 RDTRKLWRNIEPHLKKAMQTVYLREISSSQWEKLQKDDTDPGQLKGL--SAHTHVELP 303 + + E K A++++ + E D G L+ + VELP Sbjct: 424 TEILEKMVVTEDDFKNALKSIEPSSLREVMVEVPNVHWDDIGGLEDVKREIKETVELP 481 >3B6U-A nrPDB Length = 372 Score = 28.9 bits (63), Expect = 5.2, Method: Composition-based stats. Identities = 12/34 (35%), Positives = 17/34 (50%) Query: 32 SIFIYGHTASGKTYVTQTLLKTLELPHVFVNCVE 65 +IF YG T +GKTY + + E V N + Sbjct: 104 TIFAYGQTGTGKTYTMEGIRGDPEKRGVIPNSFD 137 >3VAA-A nrPDB Length = 199 Score = 28.5 bits (62), Expect = 5.4, Method: Composition-based stats. Identities = 8/30 (26%), Positives = 18/30 (60%) Query: 33 IFIYGHTASGKTYVTQTLLKTLELPHVFVN 62 IF+ G+ +GKT + + + L +P + ++ Sbjct: 28 IFLTGYMGAGKTTLGKAFARKLNVPFIDLD 57 >4WNR-A nrPDB Length = 349 Score = 28.5 bits (62), Expect = 6.0, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 27/52 (51%) Query: 2 PHLENVVLCRESQVSILQSLFGERHHFSFPSIFIYGHTASGKTYVTQTLLKT 53 P +E V RE+ ++ +SL GE+ + + + G +GKT + + LL Sbjct: 13 PPIEIVKQGREAVINYFKSLEGEKKPLNEVKVLLVGDGEAGKTSLLKRLLGE 64 >5VC7-A nrPDB Length = 564 Score = 28.5 bits (62), Expect = 6.5, Method: Composition-based stats. Identities = 47/298 (15%), Positives = 96/298 (32%), Gaps = 46/298 (15%) Query: 24 ERHHFSFPS-IFIYGHTASGKTYVTQTLLKTLELPHVFVNCVECFT---------LRLLL 73 ER + P + +YG +GKT + + + + +N E + LR + Sbjct: 36 ERLGITPPKGVILYGPPGTGKTLIARAVANESGANFLSINGPEIMSKYYGQSEQKLREIF 95 Query: 74 EQILNKLNHLSSSEDGCSTEITCETFNDFVR---LFKQVTTAENLKDQTVYIVLDKAEYL 130 + + ++ S E V + + +T + +K++ IV+ + Sbjct: 96 SKAEETAPSIIFIDEIDSIAPKREEVQGEVERRVVAQLLTLMDGMKERGHVIVIGATNRI 155 Query: 131 RDMEANLLPGFLRLQELADRNVTVLFLSEIVWEKFRPNTGCFEPFVLYFPDYS-IGNLQK 189 ++ LR DR + + PD + + Sbjct: 156 DAIDPA-----LRRPGRFDREIEI-----------------------GVPDRNGRKEILM 187 Query: 190 ILSHDHPPEYSADFYAAYINILLGVFYT-VCRDLKEL-RHLAVLNFPKYCEPVVKGEASE 247 I + + P S + ++ + Y V DL L R A+ +Y + + Sbjct: 188 IHTRNMPLGMSEEEKNKFLEEMADYTYGFVGADLAALVRESAMNALRRYLPEIDLDKPIP 247 Query: 248 RDTRKLWRNIEPHLKKAMQTVYLREISSSQWEKLQKDDTDPGQLKGL--SAHTHVELP 303 + + E K A++++ + E D G L+ + VELP Sbjct: 248 TEILEKMVVTEDDFKNALKSIEPSSLREVMVEVPNVHWDDIGGLEDVKREIKETVELP 305 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.319 0.134 0.330 Lambda K H 0.267 0.0412 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 15,280,764 Number of Sequences: 36641 Number of extensions: 561908 Number of successful extensions: 1771 Number of sequences better than 10.0: 34 Number of HSP's better than 10.0 without gapping: 22 Number of HSP's successfully gapped in prelim test: 31 Number of HSP's that attempted gapping in prelim test: 1715 Number of HSP's gapped (non-prelim): 56 length of query: 435 length of database: 10,336,785 effective HSP length: 100 effective length of query: 335 effective length of database: 6,672,685 effective search space: 2235349475 effective search space used: 2235349475 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 61 (28.1 bits)