BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= O43741 (272 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 6B2E-B nrPDB 563 e-161 4RER-B nrPDB 409 e-115 5ISO-B nrPDB 390 e-109 6E4W-B nrPDB 338 2e-93 2LU3-A nrPDB 204 3e-53 2V9J-B nrPDB 181 3e-46 4YEE-A nrPDB 176 1e-44 1Z0N-A nrPDB 160 7e-40 4EAG-B nrPDB 154 3e-38 4YEF-A nrPDB 149 1e-36 4EAL-B nrPDB 140 4e-34 2QLV-B nrPDB 104 4e-23 3T4N-B nrPDB 65 4e-11 2QRE-B nrPDB 62 2e-10 4PYH-A nrPDB 49 2e-06 5OT1-A nrPDB 43 1e-04 5BQD-A nrPDB 34 0.082 5CJH-A nrPDB 33 0.16 2X6V-A nrPDB 30 0.74 4AEF-A nrPDB 30 0.77 5FLV-A nrPDB 30 0.97 3NWO-A nrPDB 29 2.6 5KDI-A nrPDB 28 2.8 6EKK-A nrPDB 28 3.3 2CDQ-A nrPDB 27 8.0 >6B2E-B nrPDB Length = 272 Score = 563 bits (1452), Expect = e-161, Method: Compositional matrix adjust. Identities = 272/272 (100%), Positives = 272/272 (100%) Query: 1 MGNTTSDRVSGERHGAKAARSEGAGGHAPGKEHKIMVGSTDDPSVFSLPDSKLPGDKEFV 60 MGNTTSDRVSGERHGAKAARSEGAGGHAPGKEHKIMVGSTDDPSVFSLPDSKLPGDKEFV Sbjct: 1 MGNTTSDRVSGERHGAKAARSEGAGGHAPGKEHKIMVGSTDDPSVFSLPDSKLPGDKEFV 60 Query: 61 SWQQDLEDSVKPTQQARPTVIRWSEGGKEVFISGSFNNWSTKIPLIKSHNDFVAILDLPE 120 SWQQDLEDSVKPTQQARPTVIRWSEGGKEVFISGSFNNWSTKIPLIKSHNDFVAILDLPE Sbjct: 61 SWQQDLEDSVKPTQQARPTVIRWSEGGKEVFISGSFNNWSTKIPLIKSHNDFVAILDLPE 120 Query: 121 GEHQYKFFVDGQWVHDPSEPVVTSQLGTINNLIHVKKSDFEVFDALKLDSMESSETSCRD 180 GEHQYKFFVDGQWVHDPSEPVVTSQLGTINNLIHVKKSDFEVFDALKLDSMESSETSCRD Sbjct: 121 GEHQYKFFVDGQWVHDPSEPVVTSQLGTINNLIHVKKSDFEVFDALKLDSMESSETSCRD 180 Query: 181 LSSSPPGPYGQEMYAFRSEERFKSPPILPPHLLQVILNKDTNISCDPALLPEPNHVMLNH 240 LSSSPPGPYGQEMYAFRSEERFKSPPILPPHLLQVILNKDTNISCDPALLPEPNHVMLNH Sbjct: 181 LSSSPPGPYGQEMYAFRSEERFKSPPILPPHLLQVILNKDTNISCDPALLPEPNHVMLNH 240 Query: 241 LYALSIKDSVMVLSATHRYKKKYVTTLLYKPI 272 LYALSIKDSVMVLSATHRYKKKYVTTLLYKPI Sbjct: 241 LYALSIKDSVMVLSATHRYKKKYVTTLLYKPI 272 >4RER-B nrPDB Length = 197 Score = 409 bits (1052), Expect = e-115, Method: Compositional matrix adjust. Identities = 197/197 (100%), Positives = 197/197 (100%) Query: 76 ARPTVIRWSEGGKEVFISGSFNNWSTKIPLIKSHNDFVAILDLPEGEHQYKFFVDGQWVH 135 ARPTVIRWSEGGKEVFISGSFNNWSTKIPLIKSHNDFVAILDLPEGEHQYKFFVDGQWVH Sbjct: 1 ARPTVIRWSEGGKEVFISGSFNNWSTKIPLIKSHNDFVAILDLPEGEHQYKFFVDGQWVH 60 Query: 136 DPSEPVVTSQLGTINNLIHVKKSDFEVFDALKLDSMESSETSCRDLSSSPPGPYGQEMYA 195 DPSEPVVTSQLGTINNLIHVKKSDFEVFDALKLDSMESSETSCRDLSSSPPGPYGQEMYA Sbjct: 61 DPSEPVVTSQLGTINNLIHVKKSDFEVFDALKLDSMESSETSCRDLSSSPPGPYGQEMYA 120 Query: 196 FRSEERFKSPPILPPHLLQVILNKDTNISCDPALLPEPNHVMLNHLYALSIKDSVMVLSA 255 FRSEERFKSPPILPPHLLQVILNKDTNISCDPALLPEPNHVMLNHLYALSIKDSVMVLSA Sbjct: 121 FRSEERFKSPPILPPHLLQVILNKDTNISCDPALLPEPNHVMLNHLYALSIKDSVMVLSA 180 Query: 256 THRYKKKYVTTLLYKPI 272 THRYKKKYVTTLLYKPI Sbjct: 181 THRYKKKYVTTLLYKPI 197 >5ISO-B nrPDB Length = 286 Score = 390 bits (1003), Expect = e-109, Method: Compositional matrix adjust. Identities = 192/273 (70%), Positives = 223/273 (81%), Gaps = 4/273 (1%) Query: 1 MGNTTSDRVSGERHGA-KAARSEGAGGHAPGKEHKIMVGSTDDPSVFSLPDSKLPGDKEF 59 MGNT+S+R + ERHG K R + +GG G KI++ S +D +F + K P +EF Sbjct: 17 MGNTSSERAALERHGGHKTPRRDSSGGTKDGDRPKILMDSPEDADLFHSEEIKAPEKEEF 76 Query: 60 VSWQQDLEDSVKPTQQARPTVIRWSEGGKEVFISGSFNNWSTKIPLIKSHNDFVAILDLP 119 ++WQ DLE + K QARPTV RW+ GGKEV++SGSFNNWS K+PL +SHN+FVAILDLP Sbjct: 77 LAWQHDLEVNDKAPAQARPTVFRWTGGGKEVYLSGSFNNWS-KLPLTRSHNNFVAILDLP 135 Query: 120 EGEHQYKFFVDGQWVHDPSEPVVTSQLGTINNLIHVKKSDFEVFDALKLDSMESSETSCR 179 EGEHQYKFFVDGQW HDPSEP+VTSQLGT+NN+I VKK+DFEVFDAL +DS + S+ S Sbjct: 136 EGEHQYKFFVDGQWTHDPSEPIVTSQLGTVNNIIQVKKTDFEVFDALMVDSQKCSDVS-- 193 Query: 180 DLSSSPPGPYGQEMYAFRSEERFKSPPILPPHLLQVILNKDTNISCDPALLPEPNHVMLN 239 +LSSSPPGPY QE Y + EERF++PPILPPHLLQVILNKDT ISCDPALLPEPNHVMLN Sbjct: 194 ELSSSPPGPYHQEPYVCKPEERFRAPPILPPHLLQVILNKDTGISCDPALLPEPNHVMLN 253 Query: 240 HLYALSIKDSVMVLSATHRYKKKYVTTLLYKPI 272 HLYALSIKD VMVLSATHRYKKKYVTTLLYKPI Sbjct: 254 HLYALSIKDGVMVLSATHRYKKKYVTTLLYKPI 286 >6E4W-B nrPDB Length = 204 Score = 338 bits (866), Expect = 2e-93, Method: Compositional matrix adjust. Identities = 164/207 (79%), Positives = 182/207 (87%), Gaps = 3/207 (1%) Query: 66 LEDSVKPTQQARPTVIRWSEGGKEVFISGSFNNWSTKIPLIKSHNDFVAILDLPEGEHQY 125 +E + K QARPTV RW+ GGKEV++SGSFNNWS K+PL +S N+FVAILDLPEGEHQY Sbjct: 1 MEVNEKAPAQARPTVFRWTGGGKEVYLSGSFNNWS-KLPLTRSQNNFVAILDLPEGEHQY 59 Query: 126 KFFVDGQWVHDPSEPVVTSQLGTINNLIHVKKSDFEVFDALKLDSMESSETSCRDLSSSP 185 KFFVDGQW HDPSEP+VTSQLGT+NN+I VKK+DFEVFDAL +DS + S+ S +LSSSP Sbjct: 60 KFFVDGQWTHDPSEPIVTSQLGTVNNIIQVKKTDFEVFDALMVDSQKCSDVS--ELSSSP 117 Query: 186 PGPYGQEMYAFRSEERFKSPPILPPHLLQVILNKDTNISCDPALLPEPNHVMLNHLYALS 245 PGPY QE Y + EERFK+PPILPPHLLQVILNKDT ISCDPALLPEPNHVMLNHLYALS Sbjct: 118 PGPYHQEPYISKPEERFKAPPILPPHLLQVILNKDTGISCDPALLPEPNHVMLNHLYALS 177 Query: 246 IKDSVMVLSATHRYKKKYVTTLLYKPI 272 IKD VMVLSATHRYKKKYVTTLLYKPI Sbjct: 178 IKDGVMVLSATHRYKKKYVTTLLYKPI 204 >2LU3-A nrPDB Length = 105 Score = 204 bits (519), Expect = 3e-53, Method: Compositional matrix adjust. Identities = 97/97 (100%), Positives = 97/97 (100%) Query: 68 DSVKPTQQARPTVIRWSEGGKEVFISGSFNNWSTKIPLIKSHNDFVAILDLPEGEHQYKF 127 DSVKPTQQARPTVIRWSEGGKEVFISGSFNNWSTKIPLIKSHNDFVAILDLPEGEHQYKF Sbjct: 9 DSVKPTQQARPTVIRWSEGGKEVFISGSFNNWSTKIPLIKSHNDFVAILDLPEGEHQYKF 68 Query: 128 FVDGQWVHDPSEPVVTSQLGTINNLIHVKKSDFEVFD 164 FVDGQWVHDPSEPVVTSQLGTINNLIHVKKSDFEVFD Sbjct: 69 FVDGQWVHDPSEPVVTSQLGTINNLIHVKKSDFEVFD 105 >2V9J-B nrPDB Length = 87 Score = 181 bits (459), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 86/86 (100%), Positives = 86/86 (100%) Query: 187 GPYGQEMYAFRSEERFKSPPILPPHLLQVILNKDTNISCDPALLPEPNHVMLNHLYALSI 246 GPYGQEMYAFRSEERFKSPPILPPHLLQVILNKDTNISCDPALLPEPNHVMLNHLYALSI Sbjct: 2 GPYGQEMYAFRSEERFKSPPILPPHLLQVILNKDTNISCDPALLPEPNHVMLNHLYALSI 61 Query: 247 KDSVMVLSATHRYKKKYVTTLLYKPI 272 KDSVMVLSATHRYKKKYVTTLLYKPI Sbjct: 62 KDSVMVLSATHRYKKKYVTTLLYKPI 87 >4YEE-A nrPDB Length = 90 Score = 176 bits (445), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 83/85 (97%), Positives = 83/85 (97%) Query: 72 PTQQARPTVIRWSEGGKEVFISGSFNNWSTKIPLIKSHNDFVAILDLPEGEHQYKFFVDG 131 P QARPTVIRWSEGGKEVFISGSFNNWSTKIPLIKSHNDFVAILDLPEGEHQYKFFVDG Sbjct: 6 PNSQARPTVIRWSEGGKEVFISGSFNNWSTKIPLIKSHNDFVAILDLPEGEHQYKFFVDG 65 Query: 132 QWVHDPSEPVVTSQLGTINNLIHVK 156 QWVHDPSEPVVTSQLGTINNLIHVK Sbjct: 66 QWVHDPSEPVVTSQLGTINNLIHVK 90 >1Z0N-A nrPDB Length = 96 Score = 160 bits (404), Expect = 7e-40, Method: Compositional matrix adjust. Identities = 72/93 (77%), Positives = 83/93 (89%), Gaps = 1/93 (1%) Query: 71 KPTQQARPTVIRWSEGGKEVFISGSFNNWSTKIPLIKSHNDFVAILDLPEGEHQYKFFVD 130 K QARPTV RW+ GGKEV++SGSFNNWS K+P+ +S N+FVAILDLPEGEHQYKFFVD Sbjct: 5 KAPAQARPTVFRWTGGGKEVYLSGSFNNWS-KLPMTRSQNNFVAILDLPEGEHQYKFFVD 63 Query: 131 GQWVHDPSEPVVTSQLGTINNLIHVKKSDFEVF 163 GQW HDPSEP+VTSQLGT+NN+I VKK+DFEVF Sbjct: 64 GQWTHDPSEPIVTSQLGTVNNIIQVKKTDFEVF 96 >4EAG-B nrPDB Length = 85 Score = 154 bits (390), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 75/84 (89%), Positives = 77/84 (91%) Query: 189 YGQEMYAFRSEERFKSPPILPPHLLQVILNKDTNISCDPALLPEPNHVMLNHLYALSIKD 248 Y QE Y + EERFK+PPILPPHLLQVILNKDT ISCDPALLPEPNHVMLNHLYALSIKD Sbjct: 2 YHQEPYISKPEERFKAPPILPPHLLQVILNKDTGISCDPALLPEPNHVMLNHLYALSIKD 61 Query: 249 SVMVLSATHRYKKKYVTTLLYKPI 272 VMVLSATHRYKKKYVTTLLYKPI Sbjct: 62 GVMVLSATHRYKKKYVTTLLYKPI 85 >4YEF-A nrPDB Length = 89 Score = 149 bits (375), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 67/85 (78%), Positives = 76/85 (89%), Gaps = 1/85 (1%) Query: 72 PTQQARPTVIRWSEGGKEVFISGSFNNWSTKIPLIKSHNDFVAILDLPEGEHQYKFFVDG 131 P QARPTV RW+ GGKEV++SGSFNNWS K+PL +S N+FVAILDLPEGEHQYKFFVDG Sbjct: 6 PNSQARPTVFRWTGGGKEVYLSGSFNNWS-KLPLTRSQNNFVAILDLPEGEHQYKFFVDG 64 Query: 132 QWVHDPSEPVVTSQLGTINNLIHVK 156 QW HDPSEP+VTSQLGT+NN+I VK Sbjct: 65 QWTHDPSEPIVTSQLGTVNNIIQVK 89 >4EAL-B nrPDB Length = 72 Score = 140 bits (354), Expect = 4e-34, Method: Composition-based stats. Identities = 68/71 (95%), Positives = 69/71 (97%) Query: 202 FKSPPILPPHLLQVILNKDTNISCDPALLPEPNHVMLNHLYALSIKDSVMVLSATHRYKK 261 FK+PPILPPHLLQVILNKDT ISCDPALLPEPNHVMLNHLYALSIKD VMVLSATHRYKK Sbjct: 2 FKAPPILPPHLLQVILNKDTGISCDPALLPEPNHVMLNHLYALSIKDGVMVLSATHRYKK 61 Query: 262 KYVTTLLYKPI 272 KYVTTLLYKPI Sbjct: 62 KYVTTLLYKPI 72 >2QLV-B nrPDB Length = 252 Score = 104 bits (259), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 80/248 (32%), Positives = 114/248 (45%), Gaps = 53/248 (21%) Query: 78 PTVIRWSEGGKEVFISGSFNNWSTKIPLI---KSHNDFVAILDLPEGEHQYKFFVDGQWV 134 P IRW +GG +V+++GSF W I LI ++ F L L G H+++F VD + Sbjct: 5 PVEIRWQQGGSKVYVTGSFTKWRKMIGLIPDSDNNGSFHVKLRLLPGTHRFRFIVDNELR 64 Query: 135 HDPSEPVVTSQLGTINNLIHVKKSD----FEVFDALKLDSME--SSETSC---------- 178 P T Q+G N I V++ + E + + DSM +S+ S Sbjct: 65 VSDFLPTATDQMGNFVNYIEVRQPEKNPTNEKIRSKEADSMRPPTSDRSSIALQIGKDPD 124 Query: 179 ----------RDLSSSPPGPYGQEMYAFRSE----ERFK---------------SPPILP 209 DLS PP Y ++ A ++ ER+ +PP LP Sbjct: 125 DFGDGYTRFHEDLSPRPPLEYTTDIPAVFTDPSVMERYYYTLDRQQSNTDTSWLTPPQLP 184 Query: 210 PHLLQVILNK-----DTNISCDPALLPEPNHVMLNHLYALSIKDSVMVLSATHRYKKKYV 264 P L VILNK D + LP PNHV+LNHL SIK + + +++ RYK+KYV Sbjct: 185 PQLENVILNKYYATQDQFNENNSGALPIPNHVVLNHLVTSSIKHNTLCVASIVRYKQKYV 244 Query: 265 TTLLYKPI 272 T +LY PI Sbjct: 245 TQILYTPI 252 >3T4N-B nrPDB Length = 113 Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 36/74 (48%), Positives = 46/74 (62%), Gaps = 5/74 (6%) Query: 204 SPPILPPHLLQVILNK-----DTNISCDPALLPEPNHVMLNHLYALSIKDSVMVLSATHR 258 +PP LPP L VILNK D + LP PNHV+LNHL SIK + + +++ R Sbjct: 37 TPPQLPPQLENVILNKYYATQDQFNENNSGALPIPNHVVLNHLVTSSIKHNTLCVASIVR 96 Query: 259 YKKKYVTTLLYKPI 272 YK+KYVT +LY PI Sbjct: 97 YKQKYVTQILYTPI 110 >2QRE-B nrPDB Length = 97 Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 29/57 (50%), Positives = 40/57 (70%) Query: 214 QVILNKDTNISCDPALLPEPNHVMLNHLYALSIKDSVMVLSATHRYKKKYVTTLLYK 270 + ILN +T D ++LP PNHV+LNHL A + + V+ LSAT RY +KYVTT ++K Sbjct: 37 KCILNSNTAYKEDQSVLPNPNHVLLNHLAAANTQLGVLALSATTRYHRKYVTTAMFK 93 >4PYH-A nrPDB Length = 294 Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 27/74 (36%), Positives = 40/74 (54%), Gaps = 3/74 (4%) Query: 85 EGGKEVFISGSFNNWSTKIPLIKSHNDFVAIL--DLPEGEHQYKFFVDGQWVHDPSEPVV 142 +G V ISG W +IPL IL +LPEG+ +YK+ +DG+W H+ +EP + Sbjct: 179 KGFSRVEISGLDIGWGQRIPLTLDKGTGFWILKRELPEGQFEYKYIIDGEWTHNEAEPFI 238 Query: 143 T-SQLGTINNLIHV 155 ++ G NN V Sbjct: 239 GPNKDGHTNNYAKV 252 >5OT1-A nrPDB Length = 765 Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 20/52 (38%), Positives = 32/52 (61%), Gaps = 1/52 (1%) Query: 88 KEVFISGSFNNWSTKIPLIKSHNDFVAILDLPEGEHQYKFFVDGQWVHDPSE 139 K V + GSFNNW + P+ + + + L G ++YK+F++GQWV D S+ Sbjct: 100 KSVSLRGSFNNWG-EWPMELKNGTWETTVCLRPGRYEYKYFINGQWVKDMSD 150 >5BQD-A nrPDB Length = 239 Score = 33.9 bits (76), Expect = 0.082, Method: Compositional matrix adjust. Identities = 26/102 (25%), Positives = 50/102 (49%), Gaps = 8/102 (7%) Query: 51 SKLPGDKEFVSWQQDLEDSVKPTQQARPTVIRWSEGGKEVFISGS----FNNWSTKIPLI 106 SK P + QQ +E +K R +++ E G E+ I+ + F ++ K+ + Sbjct: 36 SKSPSSPQAAFTQQGME-GIKVFLHERELWLKFHEVGTEMIITKAGRRMFPSYKVKVTGL 94 Query: 107 KSHNDFVAILDL-PEGEHQYKFFVDGQW-VHDPSEPVVTSQL 146 ++ ++D+ P +H+YK F D +W V +EP + +L Sbjct: 95 NPKTKYILLMDIVPADDHRYK-FADNKWSVTGKAEPAMPGRL 135 >5CJH-A nrPDB Length = 764 Score = 32.7 bits (73), Expect = 0.16, Method: Compositional matrix adjust. Identities = 30/110 (27%), Positives = 45/110 (40%), Gaps = 29/110 (26%) Query: 24 AGGHAPGKEHKIMVGSTDDPSVFSLPDSKLPGDKEFVSWQQDLEDSVKPTQQAR------ 77 AGGHA GK H + GS P+ P++ G + + W + D P Q Sbjct: 289 AGGHAFGKTHGAVKGSNIGPA----PEAADLG-MQGLGWHNSVGDGNGPNQMTSGLEVIW 343 Query: 78 -PTVIRWSEGGKEVFISGSFNNWSTKIPLIKSHNDFVAILDLPEGEHQYK 126 T +WS G E I+ NNW+ +++ P G HQ++ Sbjct: 344 TKTPTKWSNGYLESLIN---NNWT--------------LVESPAGAHQWE 376 >2X6V-A nrPDB Length = 203 Score = 30.4 bits (67), Expect = 0.74, Method: Compositional matrix adjust. Identities = 20/85 (23%), Positives = 43/85 (50%), Gaps = 7/85 (8%) Query: 68 DSVKPTQQARPTVIRWSEGGKEVFISGS----FNNWSTKIPLIKSHNDFVAILDL-PEGE 122 + +K R +++ E G E+ I+ + F ++ K+ + ++ ++D+ P + Sbjct: 4 EGIKVFLHERELWLKFHEVGTEMIITKAGRRMFPSYKVKVTGLNPKTKYILLMDIVPADD 63 Query: 123 HQYKFFVDGQW-VHDPSEPVVTSQL 146 H+YK F D +W V +EP + +L Sbjct: 64 HRYK-FADNKWSVTGKAEPAMPGRL 87 >4AEF-A nrPDB Length = 645 Score = 30.4 bits (67), Expect = 0.77, Method: Compositional matrix adjust. Identities = 21/61 (34%), Positives = 24/61 (39%), Gaps = 19/61 (31%) Query: 86 GGKEVFISGSFN------NWSTKIPLIKSHNDFVAILDLPEGEHQYKFFVDGQWVHDPSE 139 G F GSF NW KI L PEG Y F +DG++V DP Sbjct: 34 GDFNAFNEGSFRMEQEGKNWKIKIAL-------------PEGVWHYAFSIDGKFVLDPDN 80 Query: 140 P 140 P Sbjct: 81 P 81 >5FLV-A nrPDB Length = 285 Score = 30.0 bits (66), Expect = 0.97, Method: Compositional matrix adjust. Identities = 20/85 (23%), Positives = 43/85 (50%), Gaps = 7/85 (8%) Query: 68 DSVKPTQQARPTVIRWSEGGKEVFISGS----FNNWSTKIPLIKSHNDFVAILDL-PEGE 122 + +K R +++ E G E+ I+ + F ++ K+ + ++ ++D+ P + Sbjct: 86 EGIKVFLHERELWLKFHEVGTEMIITKAGRRMFPSYKVKVTGLNPKTKYILLMDIVPADD 145 Query: 123 HQYKFFVDGQW-VHDPSEPVVTSQL 146 H+YK F D +W V +EP + +L Sbjct: 146 HRYK-FADNKWSVTGKAEPAMPGRL 169 >3NWO-A nrPDB Length = 330 Score = 28.9 bits (63), Expect = 2.6, Method: Compositional matrix adjust. Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 5/60 (8%) Query: 64 QDLEDSVKPTQQARPTVIRWSEGGKEVFISGSFNNWSTKIPLIKSHNDFVAILDLPEGEH 123 QD DSV +A PTV G E + G+ +WS +I D A + + GEH Sbjct: 219 QDFADSVA-QMEAEPTVYHTMNGPNEFHVVGTLGDWS----VIDRLPDVTAPVLVIAGEH 273 >5KDI-A nrPDB Length = 211 Score = 28.5 bits (62), Expect = 2.8, Method: Compositional matrix adjust. Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 3/50 (6%) Query: 108 SHNDFVAILDLPEGEHQYKFFVDGQWVHDPS--EPVVTSQLGTINNLIHV 155 S+ DFVA L + EG+HQ + F G D S P + QL ++ L V Sbjct: 154 SYEDFVAALTVKEGDHQKEAFSIGMQ-RDLSLYLPAMEKQLAILDTLYEV 202 >6EKK-A nrPDB Length = 393 Score = 28.5 bits (62), Expect = 3.3, Method: Compositional matrix adjust. Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 11/66 (16%) Query: 149 INNLIHVKKSDFEVFDALKLDSMESSETSCRDLSSSPPGP-YGQEMYAFRSEERFKSPPI 207 +NN++H+ S L + S S+ T+C S++ P Y Q +Y P+ Sbjct: 180 VNNMLHLYASMLYERRILIICSKLSTLTACIHGSAAMLYPMYWQHVYI----------PV 229 Query: 208 LPPHLL 213 LPPHLL Sbjct: 230 LPPHLL 235 >2CDQ-A nrPDB Length = 510 Score = 27.3 bits (59), Expect = 8.0, Method: Compositional matrix adjust. Identities = 9/15 (60%), Positives = 12/15 (80%) Query: 133 WVHDPSEPVVTSQLG 147 W+HDP+ P+VT LG Sbjct: 203 WMHDPAVPIVTGFLG 217 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 5ISO-B nrPDB 470 e-133 6B2E-B nrPDB 468 e-133 6E4W-B nrPDB 358 2e-99 4RER-B nrPDB 344 3e-95 2QLV-B nrPDB 250 4e-67 2LU3-A nrPDB 170 5e-43 1Z0N-A nrPDB 170 5e-43 4EAG-B nrPDB 159 1e-39 2V9J-B nrPDB 158 3e-39 4YEE-A nrPDB 151 4e-37 4YEF-A nrPDB 149 2e-36 4EAL-B nrPDB 139 1e-33 3T4N-B nrPDB 119 2e-27 4PYH-A nrPDB 106 1e-23 2QRE-B nrPDB 97 1e-20 5OT1-A nrPDB 84 6e-17 Sequences not found previously or not previously below threshold: 4AEF-A nrPDB 42 3e-04 5CLW-A nrPDB 34 0.10 5E70-A nrPDB 33 0.16 6GNF-A nrPDB 33 0.17 3K1D-A nrPDB 32 0.20 1ZS9-A nrPDB 32 0.29 4AEE-A nrPDB 32 0.40 5GQY-A nrPDB 30 0.79 2WAN-A nrPDB 29 1.7 2KN4-A nrPDB 28 3.7 2MHK-A nrPDB 28 5.4 4V8P-BF nrPDB 27 8.9 >5ISO-B nrPDB Length = 286 Score = 470 bits (1210), Expect = e-133, Method: Composition-based stats. Identities = 192/273 (70%), Positives = 223/273 (81%), Gaps = 4/273 (1%) Query: 1 MGNTTSDRVSGERHGA-KAARSEGAGGHAPGKEHKIMVGSTDDPSVFSLPDSKLPGDKEF 59 MGNT+S+R + ERHG K R + +GG G KI++ S +D +F + K P +EF Sbjct: 17 MGNTSSERAALERHGGHKTPRRDSSGGTKDGDRPKILMDSPEDADLFHSEEIKAPEKEEF 76 Query: 60 VSWQQDLEDSVKPTQQARPTVIRWSEGGKEVFISGSFNNWSTKIPLIKSHNDFVAILDLP 119 ++WQ DLE + K QARPTV RW+ GGKEV++SGSFNNWS K+PL +SHN+FVAILDLP Sbjct: 77 LAWQHDLEVNDKAPAQARPTVFRWTGGGKEVYLSGSFNNWS-KLPLTRSHNNFVAILDLP 135 Query: 120 EGEHQYKFFVDGQWVHDPSEPVVTSQLGTINNLIHVKKSDFEVFDALKLDSMESSETSCR 179 EGEHQYKFFVDGQW HDPSEP+VTSQLGT+NN+I VKK+DFEVFDAL +DS + S+ S Sbjct: 136 EGEHQYKFFVDGQWTHDPSEPIVTSQLGTVNNIIQVKKTDFEVFDALMVDSQKCSDVS-- 193 Query: 180 DLSSSPPGPYGQEMYAFRSEERFKSPPILPPHLLQVILNKDTNISCDPALLPEPNHVMLN 239 +LSSSPPGPY QE Y + EERF++PPILPPHLLQVILNKDT ISCDPALLPEPNHVMLN Sbjct: 194 ELSSSPPGPYHQEPYVCKPEERFRAPPILPPHLLQVILNKDTGISCDPALLPEPNHVMLN 253 Query: 240 HLYALSIKDSVMVLSATHRYKKKYVTTLLYKPI 272 HLYALSIKD VMVLSATHRYKKKYVTTLLYKPI Sbjct: 254 HLYALSIKDGVMVLSATHRYKKKYVTTLLYKPI 286 >6B2E-B nrPDB Length = 272 Score = 468 bits (1205), Expect = e-133, Method: Composition-based stats. Identities = 272/272 (100%), Positives = 272/272 (100%) Query: 1 MGNTTSDRVSGERHGAKAARSEGAGGHAPGKEHKIMVGSTDDPSVFSLPDSKLPGDKEFV 60 MGNTTSDRVSGERHGAKAARSEGAGGHAPGKEHKIMVGSTDDPSVFSLPDSKLPGDKEFV Sbjct: 1 MGNTTSDRVSGERHGAKAARSEGAGGHAPGKEHKIMVGSTDDPSVFSLPDSKLPGDKEFV 60 Query: 61 SWQQDLEDSVKPTQQARPTVIRWSEGGKEVFISGSFNNWSTKIPLIKSHNDFVAILDLPE 120 SWQQDLEDSVKPTQQARPTVIRWSEGGKEVFISGSFNNWSTKIPLIKSHNDFVAILDLPE Sbjct: 61 SWQQDLEDSVKPTQQARPTVIRWSEGGKEVFISGSFNNWSTKIPLIKSHNDFVAILDLPE 120 Query: 121 GEHQYKFFVDGQWVHDPSEPVVTSQLGTINNLIHVKKSDFEVFDALKLDSMESSETSCRD 180 GEHQYKFFVDGQWVHDPSEPVVTSQLGTINNLIHVKKSDFEVFDALKLDSMESSETSCRD Sbjct: 121 GEHQYKFFVDGQWVHDPSEPVVTSQLGTINNLIHVKKSDFEVFDALKLDSMESSETSCRD 180 Query: 181 LSSSPPGPYGQEMYAFRSEERFKSPPILPPHLLQVILNKDTNISCDPALLPEPNHVMLNH 240 LSSSPPGPYGQEMYAFRSEERFKSPPILPPHLLQVILNKDTNISCDPALLPEPNHVMLNH Sbjct: 181 LSSSPPGPYGQEMYAFRSEERFKSPPILPPHLLQVILNKDTNISCDPALLPEPNHVMLNH 240 Query: 241 LYALSIKDSVMVLSATHRYKKKYVTTLLYKPI 272 LYALSIKDSVMVLSATHRYKKKYVTTLLYKPI Sbjct: 241 LYALSIKDSVMVLSATHRYKKKYVTTLLYKPI 272 >6E4W-B nrPDB Length = 204 Score = 358 bits (918), Expect = 2e-99, Method: Composition-based stats. Identities = 164/207 (79%), Positives = 182/207 (87%), Gaps = 3/207 (1%) Query: 66 LEDSVKPTQQARPTVIRWSEGGKEVFISGSFNNWSTKIPLIKSHNDFVAILDLPEGEHQY 125 +E + K QARPTV RW+ GGKEV++SGSFNNWS K+PL +S N+FVAILDLPEGEHQY Sbjct: 1 MEVNEKAPAQARPTVFRWTGGGKEVYLSGSFNNWS-KLPLTRSQNNFVAILDLPEGEHQY 59 Query: 126 KFFVDGQWVHDPSEPVVTSQLGTINNLIHVKKSDFEVFDALKLDSMESSETSCRDLSSSP 185 KFFVDGQW HDPSEP+VTSQLGT+NN+I VKK+DFEVFDAL +DS + S+ S +LSSSP Sbjct: 60 KFFVDGQWTHDPSEPIVTSQLGTVNNIIQVKKTDFEVFDALMVDSQKCSDVS--ELSSSP 117 Query: 186 PGPYGQEMYAFRSEERFKSPPILPPHLLQVILNKDTNISCDPALLPEPNHVMLNHLYALS 245 PGPY QE Y + EERFK+PPILPPHLLQVILNKDT ISCDPALLPEPNHVMLNHLYALS Sbjct: 118 PGPYHQEPYISKPEERFKAPPILPPHLLQVILNKDTGISCDPALLPEPNHVMLNHLYALS 177 Query: 246 IKDSVMVLSATHRYKKKYVTTLLYKPI 272 IKD VMVLSATHRYKKKYVTTLLYKPI Sbjct: 178 IKDGVMVLSATHRYKKKYVTTLLYKPI 204 >4RER-B nrPDB Length = 197 Score = 344 bits (882), Expect = 3e-95, Method: Composition-based stats. Identities = 197/197 (100%), Positives = 197/197 (100%) Query: 76 ARPTVIRWSEGGKEVFISGSFNNWSTKIPLIKSHNDFVAILDLPEGEHQYKFFVDGQWVH 135 ARPTVIRWSEGGKEVFISGSFNNWSTKIPLIKSHNDFVAILDLPEGEHQYKFFVDGQWVH Sbjct: 1 ARPTVIRWSEGGKEVFISGSFNNWSTKIPLIKSHNDFVAILDLPEGEHQYKFFVDGQWVH 60 Query: 136 DPSEPVVTSQLGTINNLIHVKKSDFEVFDALKLDSMESSETSCRDLSSSPPGPYGQEMYA 195 DPSEPVVTSQLGTINNLIHVKKSDFEVFDALKLDSMESSETSCRDLSSSPPGPYGQEMYA Sbjct: 61 DPSEPVVTSQLGTINNLIHVKKSDFEVFDALKLDSMESSETSCRDLSSSPPGPYGQEMYA 120 Query: 196 FRSEERFKSPPILPPHLLQVILNKDTNISCDPALLPEPNHVMLNHLYALSIKDSVMVLSA 255 FRSEERFKSPPILPPHLLQVILNKDTNISCDPALLPEPNHVMLNHLYALSIKDSVMVLSA Sbjct: 121 FRSEERFKSPPILPPHLLQVILNKDTNISCDPALLPEPNHVMLNHLYALSIKDSVMVLSA 180 Query: 256 THRYKKKYVTTLLYKPI 272 THRYKKKYVTTLLYKPI Sbjct: 181 THRYKKKYVTTLLYKPI 197 >2QLV-B nrPDB Length = 252 Score = 250 bits (639), Expect = 4e-67, Method: Composition-based stats. Identities = 80/248 (32%), Positives = 114/248 (45%), Gaps = 53/248 (21%) Query: 78 PTVIRWSEGGKEVFISGSFNNWSTKIPLI---KSHNDFVAILDLPEGEHQYKFFVDGQWV 134 P IRW +GG +V+++GSF W I LI ++ F L L G H+++F VD + Sbjct: 5 PVEIRWQQGGSKVYVTGSFTKWRKMIGLIPDSDNNGSFHVKLRLLPGTHRFRFIVDNELR 64 Query: 135 HDPSEPVVTSQLGTINNLIHVKKSD----FEVFDALKLDSME--SSETSC---------- 178 P T Q+G N I V++ + E + + DSM +S+ S Sbjct: 65 VSDFLPTATDQMGNFVNYIEVRQPEKNPTNEKIRSKEADSMRPPTSDRSSIALQIGKDPD 124 Query: 179 ----------RDLSSSPPGPYGQEMYAFRSE----ERFK---------------SPPILP 209 DLS PP Y ++ A ++ ER+ +PP LP Sbjct: 125 DFGDGYTRFHEDLSPRPPLEYTTDIPAVFTDPSVMERYYYTLDRQQSNTDTSWLTPPQLP 184 Query: 210 PHLLQVILNK-----DTNISCDPALLPEPNHVMLNHLYALSIKDSVMVLSATHRYKKKYV 264 P L VILNK D + LP PNHV+LNHL SIK + + +++ RYK+KYV Sbjct: 185 PQLENVILNKYYATQDQFNENNSGALPIPNHVVLNHLVTSSIKHNTLCVASIVRYKQKYV 244 Query: 265 TTLLYKPI 272 T +LY PI Sbjct: 245 TQILYTPI 252 >2LU3-A nrPDB Length = 105 Score = 170 bits (431), Expect = 5e-43, Method: Composition-based stats. Identities = 97/97 (100%), Positives = 97/97 (100%) Query: 68 DSVKPTQQARPTVIRWSEGGKEVFISGSFNNWSTKIPLIKSHNDFVAILDLPEGEHQYKF 127 DSVKPTQQARPTVIRWSEGGKEVFISGSFNNWSTKIPLIKSHNDFVAILDLPEGEHQYKF Sbjct: 9 DSVKPTQQARPTVIRWSEGGKEVFISGSFNNWSTKIPLIKSHNDFVAILDLPEGEHQYKF 68 Query: 128 FVDGQWVHDPSEPVVTSQLGTINNLIHVKKSDFEVFD 164 FVDGQWVHDPSEPVVTSQLGTINNLIHVKKSDFEVFD Sbjct: 69 FVDGQWVHDPSEPVVTSQLGTINNLIHVKKSDFEVFD 105 >1Z0N-A nrPDB Length = 96 Score = 170 bits (431), Expect = 5e-43, Method: Composition-based stats. Identities = 73/97 (75%), Positives = 85/97 (87%), Gaps = 1/97 (1%) Query: 67 EDSVKPTQQARPTVIRWSEGGKEVFISGSFNNWSTKIPLIKSHNDFVAILDLPEGEHQYK 126 E + K QARPTV RW+ GGKEV++SGSFNNWS K+P+ +S N+FVAILDLPEGEHQYK Sbjct: 1 EVNEKAPAQARPTVFRWTGGGKEVYLSGSFNNWS-KLPMTRSQNNFVAILDLPEGEHQYK 59 Query: 127 FFVDGQWVHDPSEPVVTSQLGTINNLIHVKKSDFEVF 163 FFVDGQW HDPSEP+VTSQLGT+NN+I VKK+DFEVF Sbjct: 60 FFVDGQWTHDPSEPIVTSQLGTVNNIIQVKKTDFEVF 96 >4EAG-B nrPDB Length = 85 Score = 159 bits (402), Expect = 1e-39, Method: Composition-based stats. Identities = 75/84 (89%), Positives = 77/84 (91%) Query: 189 YGQEMYAFRSEERFKSPPILPPHLLQVILNKDTNISCDPALLPEPNHVMLNHLYALSIKD 248 Y QE Y + EERFK+PPILPPHLLQVILNKDT ISCDPALLPEPNHVMLNHLYALSIKD Sbjct: 2 YHQEPYISKPEERFKAPPILPPHLLQVILNKDTGISCDPALLPEPNHVMLNHLYALSIKD 61 Query: 249 SVMVLSATHRYKKKYVTTLLYKPI 272 VMVLSATHRYKKKYVTTLLYKPI Sbjct: 62 GVMVLSATHRYKKKYVTTLLYKPI 85 >2V9J-B nrPDB Length = 87 Score = 158 bits (399), Expect = 3e-39, Method: Composition-based stats. Identities = 86/86 (100%), Positives = 86/86 (100%) Query: 187 GPYGQEMYAFRSEERFKSPPILPPHLLQVILNKDTNISCDPALLPEPNHVMLNHLYALSI 246 GPYGQEMYAFRSEERFKSPPILPPHLLQVILNKDTNISCDPALLPEPNHVMLNHLYALSI Sbjct: 2 GPYGQEMYAFRSEERFKSPPILPPHLLQVILNKDTNISCDPALLPEPNHVMLNHLYALSI 61 Query: 247 KDSVMVLSATHRYKKKYVTTLLYKPI 272 KDSVMVLSATHRYKKKYVTTLLYKPI Sbjct: 62 KDSVMVLSATHRYKKKYVTTLLYKPI 87 >4YEE-A nrPDB Length = 90 Score = 151 bits (380), Expect = 4e-37, Method: Composition-based stats. Identities = 83/85 (97%), Positives = 83/85 (97%) Query: 72 PTQQARPTVIRWSEGGKEVFISGSFNNWSTKIPLIKSHNDFVAILDLPEGEHQYKFFVDG 131 P QARPTVIRWSEGGKEVFISGSFNNWSTKIPLIKSHNDFVAILDLPEGEHQYKFFVDG Sbjct: 6 PNSQARPTVIRWSEGGKEVFISGSFNNWSTKIPLIKSHNDFVAILDLPEGEHQYKFFVDG 65 Query: 132 QWVHDPSEPVVTSQLGTINNLIHVK 156 QWVHDPSEPVVTSQLGTINNLIHVK Sbjct: 66 QWVHDPSEPVVTSQLGTINNLIHVK 90 >4YEF-A nrPDB Length = 89 Score = 149 bits (375), Expect = 2e-36, Method: Composition-based stats. Identities = 67/85 (78%), Positives = 76/85 (89%), Gaps = 1/85 (1%) Query: 72 PTQQARPTVIRWSEGGKEVFISGSFNNWSTKIPLIKSHNDFVAILDLPEGEHQYKFFVDG 131 P QARPTV RW+ GGKEV++SGSFNNWS K+PL +S N+FVAILDLPEGEHQYKFFVDG Sbjct: 6 PNSQARPTVFRWTGGGKEVYLSGSFNNWS-KLPLTRSQNNFVAILDLPEGEHQYKFFVDG 64 Query: 132 QWVHDPSEPVVTSQLGTINNLIHVK 156 QW HDPSEP+VTSQLGT+NN+I VK Sbjct: 65 QWTHDPSEPIVTSQLGTVNNIIQVK 89 >4EAL-B nrPDB Length = 72 Score = 139 bits (351), Expect = 1e-33, Method: Composition-based stats. Identities = 68/71 (95%), Positives = 69/71 (97%) Query: 202 FKSPPILPPHLLQVILNKDTNISCDPALLPEPNHVMLNHLYALSIKDSVMVLSATHRYKK 261 FK+PPILPPHLLQVILNKDT ISCDPALLPEPNHVMLNHLYALSIKD VMVLSATHRYKK Sbjct: 2 FKAPPILPPHLLQVILNKDTGISCDPALLPEPNHVMLNHLYALSIKDGVMVLSATHRYKK 61 Query: 262 KYVTTLLYKPI 272 KYVTTLLYKPI Sbjct: 62 KYVTTLLYKPI 72 >3T4N-B nrPDB Length = 113 Score = 119 bits (297), Expect = 2e-27, Method: Composition-based stats. Identities = 40/109 (36%), Positives = 55/109 (50%), Gaps = 24/109 (22%) Query: 188 PYGQEMYAFRSE----ERFK---------------SPPILPPHLLQVILNK-----DTNI 223 Y ++ A ++ ER+ +PP LPP L VILNK D Sbjct: 2 EYTTDIPAVFTDPSVMERYYYTLDRQQSNTDTSWLTPPQLPPQLENVILNKYYATQDQFN 61 Query: 224 SCDPALLPEPNHVMLNHLYALSIKDSVMVLSATHRYKKKYVTTLLYKPI 272 + LP PNHV+LNHL SIK + + +++ RYK+KYVT +LY PI Sbjct: 62 ENNSGALPIPNHVVLNHLVTSSIKHNTLCVASIVRYKQKYVTQILYTPI 110 >4PYH-A nrPDB Length = 294 Score = 106 bits (264), Expect = 1e-23, Method: Composition-based stats. Identities = 32/99 (32%), Positives = 46/99 (46%), Gaps = 9/99 (9%) Query: 85 EGGKEVFISGSFNNWSTKIPLIKSHNDFVAIL--DLPEGEHQYKFFVDGQWVHDPSEPVV 142 +G V ISG W +IPL IL +LPEG+ +YK+ +DG+W H+ +EP + Sbjct: 179 KGFSRVEISGLDIGWGQRIPLTLDKGTGFWILKRELPEGQFEYKYIIDGEWTHNEAEPFI 238 Query: 143 T-SQLGTINNLIHVKKSDFEVFDALKLDSMESSETSCRD 180 ++ G NN V V D +D S D Sbjct: 239 GPNKDGHTNNYAKV------VDDPTSVDGTTRERLSSED 271 >2QRE-B nrPDB Length = 97 Score = 96.7 bits (239), Expect = 1e-20, Method: Composition-based stats. Identities = 41/88 (46%), Positives = 55/88 (62%), Gaps = 5/88 (5%) Query: 188 PYGQEMYAFRS-----EERFKSPPILPPHLLQVILNKDTNISCDPALLPEPNHVMLNHLY 242 Y E+ AF + E + PP LPPHL + ILN +T D ++LP PNHV+LNHL Sbjct: 6 QYSTEIPAFLTSNTLQELKLPKPPSLPPHLEKCILNSNTAYKEDQSVLPNPNHVLLNHLA 65 Query: 243 ALSIKDSVMVLSATHRYKKKYVTTLLYK 270 A + + V+ LSAT RY +KYVTT ++K Sbjct: 66 AANTQLGVLALSATTRYHRKYVTTAMFK 93 >5OT1-A nrPDB Length = 765 Score = 84.0 bits (206), Expect = 6e-17, Method: Composition-based stats. Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 4/70 (5%) Query: 73 TQQARPTVIRWSEGGK---EVFISGSFNNWSTKIPLIKSHNDFVAILDLPEGEHQYKFFV 129 P ++ G K V + GSFNNW + P+ + + + L G ++YK+F+ Sbjct: 82 PSGRVPVKFTYNPGNKTVKSVSLRGSFNNWG-EWPMELKNGTWETTVCLRPGRYEYKYFI 140 Query: 130 DGQWVHDPSE 139 +GQWV D S+ Sbjct: 141 NGQWVKDMSD 150 >4AEF-A nrPDB Length = 645 Score = 42.0 bits (97), Expect = 3e-04, Method: Composition-based stats. Identities = 22/92 (23%), Positives = 37/92 (40%), Gaps = 7/92 (7%) Query: 79 TVIRWSEGGKEVFISGSFNNWST-KIPLIKSHNDFVAILDLPEGEHQYKFFVDGQWVHDP 137 G ++ G FN ++ + + ++ + LPEG Y F +DG++V DP Sbjct: 19 VEFSLIREGSYAYLLGDFNAFNEGSFRMEQEGKNWKIKIALPEGVWHYAFSIDGKFVLDP 78 Query: 138 SEP------VVTSQLGTINNLIHVKKSDFEVF 163 P + N+ + KSD VF Sbjct: 79 DNPERRVYTRKGYKFHREVNVARIVKSDDLVF 110 >5CLW-A nrPDB Length = 668 Score = 33.6 bits (75), Expect = 0.10, Method: Composition-based stats. Identities = 28/118 (23%), Positives = 46/118 (38%), Gaps = 14/118 (11%) Query: 83 WSEGGKEVFISGSFNNWSTKIPLIKSHNDFVAILDLPEGEHQYKFFVDGQWVHDPSEPVV 142 W+ G + VF++G FN W+ K + L +P +++ G + V+ Sbjct: 59 WAPGAEGVFLTGDFNGWNPFSYPYKKLDYGKWELYIPPKQNKSVLVPHG----SKLKVVI 114 Query: 143 TSQLGTINNLIH------VKKSDFEVFDALKLDSMESSETSCRDLSSSPPGPYGQEMY 194 TS+ G I I V++ D +D + D E S S P P +Y Sbjct: 115 TSKSGEILYRISPWAKYVVREGDNVNYDWIHWD----PEHSYEFKHSRPKKPRSLRIY 168 >5E70-A nrPDB Length = 612 Score = 32.8 bits (73), Expect = 0.16, Method: Composition-based stats. Identities = 12/49 (24%), Positives = 19/49 (38%), Gaps = 5/49 (10%) Query: 83 WSEGGKEVFISGSFNNW-STKIPLIKSHNDFVAILDLPEGEHQ---YKF 127 W+ + V + G FN W + P+ + L G H YK+ Sbjct: 27 WAPNARRVSVVGQFNYWDGRRHPMRLRKESGIWEL-FIPGAHNGQLYKY 74 >6GNF-A nrPDB Length = 544 Score = 32.8 bits (73), Expect = 0.17, Method: Composition-based stats. Identities = 22/89 (24%), Positives = 30/89 (33%), Gaps = 14/89 (15%) Query: 162 VFDALKLDSMESSETSCRDLSSSPPGPYGQEMYAFRSEERFKSPPILPPHLLQVILNKDT 221 FDAL L + S+ S + PP E P ++L + K Sbjct: 213 KFDALNLPAKYLSDLSFNTQFAPPPLDEKTTEPITSPE---------PMYMLNWL--KAG 261 Query: 222 NISCDPALLPEPNHVMLNHLYALSIKDSV 250 ++CD AL PN H S V Sbjct: 262 FLNCDQALTVSPN---FAHEVTSSPMGGV 287 >3K1D-A nrPDB Length = 722 Score = 32.4 bits (72), Expect = 0.20, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 26/65 (40%), Gaps = 5/65 (7%) Query: 83 WSEGGKEVFISGSFNNW-STKIPLIKSHNDFVAILDLP--EGEHQYKFFVDGQ--WVHDP 137 W+ K V + G FN W + P+ V L P + YKF V G V D Sbjct: 143 WAPNAKGVSLIGEFNGWNGHEAPMRVLGPSGVWELFWPDFPCDGLYKFRVHGADGVVTDR 202 Query: 138 SEPVV 142 ++P Sbjct: 203 ADPFA 207 >1ZS9-A nrPDB Length = 261 Score = 32.0 bits (71), Expect = 0.29, Method: Composition-based stats. Identities = 25/93 (26%), Positives = 41/93 (44%), Gaps = 6/93 (6%) Query: 78 PTVIRWSEGGKEVFISGSFNNWSTKIPLIKSHNDFVAILDLPEGEHQYKFFVDGQWVHDP 137 P V +W E G +V+I S + + K L+ H+ IL+L +G K G V Sbjct: 137 PAVRKWREAGMKVYIYSSGSVEAQK--LLFGHSTEGDILELVDGHFDTKI---GHKVESE 191 Query: 138 SEPVVTSQLG-TINNLIHVKKSDFEVFDALKLD 169 S + +G + NN++ + E A + D Sbjct: 192 SYRKIADSIGCSTNNILFLTDVTREASAAEEAD 224 >4AEE-A nrPDB Length = 696 Score = 31.6 bits (70), Expect = 0.40, Method: Composition-based stats. Identities = 13/52 (25%), Positives = 24/52 (46%), Gaps = 1/52 (1%) Query: 83 WSEGGKEVFISGSFNN-WSTKIPLIKSHNDFVAILDLPEGEHQYKFFVDGQW 133 W + K +++ G F + + + L K + L L GE+ Y F +D + Sbjct: 26 WPQYAKNIYLIGEFTSLYPGFVKLRKIEEQGIVYLKLWPGEYGYGFQIDNDF 77 >5GQY-A nrPDB Length = 793 Score = 30.5 bits (67), Expect = 0.79, Method: Composition-based stats. Identities = 17/64 (26%), Positives = 29/64 (45%), Gaps = 6/64 (9%) Query: 83 WSEGGKEVFISGSFNNWSTKIPLIKSHNDFVAILDLPE---GEHQYKFFVDGQWVH--DP 137 W+ + V + G FNNW + ++ N + L +PE G YK+ + H + Sbjct: 167 WAPNARNVSVIGDFNNWDGREHQMRKRNYTIWELFVPEIGSGTV-YKYEIKNSEGHIYEK 225 Query: 138 SEPV 141 S+P Sbjct: 226 SDPY 229 >2WAN-A nrPDB Length = 921 Score = 29.3 bits (64), Expect = 1.7, Method: Composition-based stats. Identities = 30/139 (21%), Positives = 57/139 (41%), Gaps = 24/139 (17%) Query: 94 GSFNNWSTKIPLIK----SHNDFVAILDLPEGEHQYKFFVDGQWVHDPSEP-----VVTS 144 G+ NNWS + N + LP G +QYK +D W + S P + Sbjct: 177 GAANNWSPDDDHTLLKKINPNLYQLSGTLPAGTYQYKIALDHSW--NTSYPGNNVSLTVP 234 Query: 145 QLGTINNLIHVKKSDFEVFDALKLDSMESSETSCR--------DLSSSPPGPYGQEMYAF 196 + G ++ + +VFD++ + +S L+S+P + ++ A Sbjct: 235 EGGEKVTFTYIPST-NQVFDSVNHPNQAFPTSSAGVQTNLVQLTLASAPDVTHNLDVAA- 292 Query: 197 RSEERFKSPPILPPHLLQV 215 + +K+ ILP ++L + Sbjct: 293 ---DGYKAHNILPRNVLNL 308 >2KN4-A nrPDB Length = 158 Score = 28.2 bits (61), Expect = 3.7, Method: Composition-based stats. Identities = 17/74 (22%), Positives = 34/74 (45%), Gaps = 5/74 (6%) Query: 129 VDGQWVHDPSEPVVTSQLGTINNLIHVKKSDFEVFDALKLDSMESSETSCRDLSSSPPGP 188 VDG+W +D + T G+ ++ H+ D E +LK+D++ + + D Sbjct: 39 VDGEWTYDDATKTFTVTEGSHHHHHHM---DVEGMTSLKVDNL--TYRTSPDTLRRVFEK 93 Query: 189 YGQEMYAFRSEERF 202 YG+ + +R+ Sbjct: 94 YGRVGDVYIPRDRY 107 >2MHK-A nrPDB Length = 250 Score = 27.8 bits (60), Expect = 5.4, Method: Composition-based stats. Identities = 12/48 (25%), Positives = 17/48 (35%) Query: 16 AKAARSEGAGGHAPGKEHKIMVGSTDDPSVFSLPDSKLPGDKEFVSWQ 63 R G H P + M G+ S F L + D ++WQ Sbjct: 13 GLVPRGSHMGTHTPDQSTAYMQGTAQADSAFYLQQMQQSSDDTRINWQ 60 >4V8P-BF nrPDB Length = 255 Score = 27.0 bits (58), Expect = 8.9, Method: Composition-based stats. Identities = 14/59 (23%), Positives = 21/59 (35%) Query: 72 PTQQARPTVIRWSEGGKEVFISGSFNNWSTKIPLIKSHNDFVAILDLPEGEHQYKFFVD 130 P QA+P R + F W I L + + L +P HQ+ +D Sbjct: 20 PLFQAKPRSFRVGGDIQPKRDLTRFVRWPRYITLQRQKRVLLQRLKVPPQIHQFTKTLD 78 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.304 0.128 0.355 Lambda K H 0.267 0.0381 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 10,874,335 Number of Sequences: 36641 Number of extensions: 425380 Number of successful extensions: 823 Number of sequences better than 10.0: 31 Number of HSP's better than 10.0 without gapping: 43 Number of HSP's successfully gapped in prelim test: 21 Number of HSP's that attempted gapping in prelim test: 747 Number of HSP's gapped (non-prelim): 67 length of query: 272 length of database: 10,336,785 effective HSP length: 96 effective length of query: 176 effective length of database: 6,819,249 effective search space: 1200187824 effective search space used: 1200187824 T: 11 A: 40 X1: 16 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.4 bits) S2: 58 (27.1 bits)