BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= O43602 (365 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 4ATU-I nrPDB 734 0.0 2BQQ-A nrPDB 217 8e-57 5IO9-A nrPDB 201 3e-52 5IP4-D nrPDB 188 4e-48 1MFW-A nrPDB 185 2e-47 6FNZ-A nrPDB 169 2e-42 2DNF-A nrPDB 49 3e-06 5Y9F-A nrPDB 29 2.9 >4ATU-I nrPDB Length = 373 Score = 734 bits (1896), Expect = 0.0, Method: Compositional matrix adjust. Identities = 359/364 (98%), Positives = 359/364 (98%), Gaps = 5/364 (1%) Query: 2 ELDFGHFDERDKTSRNMRGSRMNGLPSPTHSAHCSFYRTRTLQALSNEKKAKKVRFYRNG 61 ELDFGHFDERDKTSRNMRGSRMNGLPSPTHSAHCSFYRTRTLQALSNEKKAKKVRFYRNG Sbjct: 15 ELDFGHFDERDKTSRNMRGSRMNGLPSPTHSAHCSFYRTRTLQALSNEKKAKKVRFYRNG 74 Query: 62 DRYFKGIVYAVSSDRFRSFDALLADLTRSLSDNINLPQGVRYIYTIDGSRKIGSMDELEE 121 DRYFKGIVYAVSSDRFRSFDALLADLTRSLSDNINLPQGVRYIYTIDGSRKIGSMDELEE Sbjct: 75 DRYFKGIVYAVSSDRFRSFDALLADLTRSLSDNINLPQGVRYIYTIDGSRKIGSMDELEE 134 Query: 122 GESYVCSSDNFFKKVEYTKNVNPNWSVNVKTSANMKAPQSLASSNSAQARENKDFVRPKL 181 GESYVCSSDNFFKKVEYTKNVNPNWSVNVKTSANMKAPQSLASSNSAQARENKDFVRPKL Sbjct: 135 GESYVCSSDNFFKKVEYTKNVNPNWSVNVKTSANMKAPQSLASSNSAQARENKDFVRPKL 194 Query: 182 VTIIRSGVKPRKAVRVLLNKKTAHSFEQVLTDITEAIKLETGVVKKLYTLDGKQVTCLHD 241 VTIIRSGVKPRKAVRVLLNKKTAHSFEQVLTDITEAIKLETGVVKKLYTLDGKQVTCLHD Sbjct: 195 VTIIRSGVKPRKAVRVLLNKKTAHSFEQVLTDITEAIKLETGVVKKLYTLDGKQVTCLHD 254 Query: 242 FFGDDDVFIACGPEKFRYAQDDFSLDENECRVMKGNPSATAGPKASPTPQKTSAKSPGPM 301 FFGDDDVFIACGPEKFRYAQDDFSLDENECRVMKGNPSATAGPKASPTPQKTSAKSPGPM Sbjct: 255 FFGDDDVFIACGPEKFRYAQDDFSLDENECRVMKGNPSATAGPKASPTPQKTSAKSPGPM 314 Query: 302 RRSKSPADSGNDQDANGTSSSQLSTPKSKQSPISTPTSPGSLRKHKDLYLPLSLDDSDSL 361 RRSKSPADS ANGTSSSQLSTPKSKQSPISTPTSPGSLRKHKDLYLPLSLDDSDSL Sbjct: 315 RRSKSPADS-----ANGTSSSQLSTPKSKQSPISTPTSPGSLRKHKDLYLPLSLDDSDSL 369 Query: 362 GDSM 365 GDSM Sbjct: 370 GDSM 373 >2BQQ-A nrPDB Length = 113 Score = 217 bits (552), Expect = 8e-57, Method: Compositional matrix adjust. Identities = 104/106 (98%), Positives = 104/106 (98%) Query: 45 ALSNEKKAKKVRFYRNGDRYFKGIVYAVSSDRFRSFDALLADLTRSLSDNINLPQGVRYI 104 ALSNEKKAKKVRFYRNGDRYFKGIVYAVSSDRFRSFDALLADLTRSLSDNINLPQGVRYI Sbjct: 8 ALSNEKKAKKVRFYRNGDRYFKGIVYAVSSDRFRSFDALLADLTRSLSDNINLPQGVRYI 67 Query: 105 YTIDGSRKIGSMDELEEGESYVCSSDNFFKKVEYTKNVNPNWSVNV 150 YTIDGSRKIGSMDELEEGESYVCSSDNFF VEYTKNVNPNWSVNV Sbjct: 68 YTIDGSRKIGSMDELEEGESYVCSSDNFFDDVEYTKNVNPNWSVNV 113 Score = 28.1 bits (61), Expect = 6.6, Method: Compositional matrix adjust. Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 5/62 (8%) Query: 178 RPKLVTIIRSGVKPRKAVRVLLNKKTAHSFEQVLTDITEA----IKLETGVVKKLYTLDG 233 + K V R+G + K + ++ SF+ +L D+T + I L G V+ +YT+DG Sbjct: 14 KAKKVRFYRNGDRYFKGIVYAVSSDRFRSFDALLADLTRSLSDNINLPQG-VRYIYTIDG 72 Query: 234 KQ 235 + Sbjct: 73 SR 74 >5IO9-A nrPDB Length = 106 Score = 201 bits (512), Expect = 3e-52, Method: Compositional matrix adjust. Identities = 96/98 (97%), Positives = 96/98 (97%) Query: 52 AKKVRFYRNGDRYFKGIVYAVSSDRFRSFDALLADLTRSLSDNINLPQGVRYIYTIDGSR 111 AKKVRFYRNGDRYFKGIVYAVSSDRFRSFDALLADLTRSLSDNINLPQGVRYIYTIDGSR Sbjct: 9 AKKVRFYRNGDRYFKGIVYAVSSDRFRSFDALLADLTRSLSDNINLPQGVRYIYTIDGSR 68 Query: 112 KIGSMDELEEGESYVCSSDNFFKKVEYTKNVNPNWSVN 149 KIGSMDELEEGESYVCSSDNFF VEYTKNVNPNWSVN Sbjct: 69 KIGSMDELEEGESYVCSSDNFFDDVEYTKNVNPNWSVN 106 >5IP4-D nrPDB Length = 91 Score = 188 bits (477), Expect = 4e-48, Method: Composition-based stats. Identities = 91/91 (100%), Positives = 91/91 (100%) Query: 170 ARENKDFVRPKLVTIIRSGVKPRKAVRVLLNKKTAHSFEQVLTDITEAIKLETGVVKKLY 229 ARENKDFVRPKLVTIIRSGVKPRKAVRVLLNKKTAHSFEQVLTDITEAIKLETGVVKKLY Sbjct: 1 ARENKDFVRPKLVTIIRSGVKPRKAVRVLLNKKTAHSFEQVLTDITEAIKLETGVVKKLY 60 Query: 230 TLDGKQVTCLHDFFGDDDVFIACGPEKFRYA 260 TLDGKQVTCLHDFFGDDDVFIACGPEKFRYA Sbjct: 61 TLDGKQVTCLHDFFGDDDVFIACGPEKFRYA 91 >1MFW-A nrPDB Length = 107 Score = 185 bits (470), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 88/105 (83%), Positives = 96/105 (91%) Query: 46 LSNEKKAKKVRFYRNGDRYFKGIVYAVSSDRFRSFDALLADLTRSLSDNINLPQGVRYIY 105 LS+EKKAKKVRFYRNGDRYFKGIVYA+S DRFRSF+ALLADLTR+LSDN+NLPQGVR IY Sbjct: 3 LSSEKKAKKVRFYRNGDRYFKGIVYAISPDRFRSFEALLADLTRTLSDNVNLPQGVRTIY 62 Query: 106 TIDGSRKIGSMDELEEGESYVCSSDNFFKKVEYTKNVNPNWSVNV 150 TIDG +KI SMD+L EGESYVC S FKK+EYTKNVNPNWSVNV Sbjct: 63 TIDGLKKISSMDQLVEGESYVCGSIEPFKKLEYTKNVNPNWSVNV 107 Score = 27.7 bits (60), Expect = 9.2, Method: Compositional matrix adjust. Identities = 21/85 (24%), Positives = 39/85 (45%), Gaps = 5/85 (5%) Query: 178 RPKLVTIIRSGVKPRKAVRVLLNKKTAHSFEQVLTDITEA----IKLETGVVKKLYTLDG 233 + K V R+G + K + ++ SFE +L D+T + L G V+ +YT+DG Sbjct: 8 KAKKVRFYRNGDRYFKGIVYAISPDRFRSFEALLADLTRTLSDNVNLPQG-VRTIYTIDG 66 Query: 234 KQVTCLHDFFGDDDVFIACGPEKFR 258 + D + + ++ E F+ Sbjct: 67 LKKISSMDQLVEGESYVCGSIEPFK 91 >6FNZ-A nrPDB Length = 81 Score = 169 bits (428), Expect = 2e-42, Method: Composition-based stats. Identities = 81/81 (100%), Positives = 81/81 (100%) Query: 174 KDFVRPKLVTIIRSGVKPRKAVRVLLNKKTAHSFEQVLTDITEAIKLETGVVKKLYTLDG 233 KDFVRPKLVTIIRSGVKPRKAVRVLLNKKTAHSFEQVLTDITEAIKLETGVVKKLYTLDG Sbjct: 1 KDFVRPKLVTIIRSGVKPRKAVRVLLNKKTAHSFEQVLTDITEAIKLETGVVKKLYTLDG 60 Query: 234 KQVTCLHDFFGDDDVFIACGP 254 KQVTCLHDFFGDDDVFIACGP Sbjct: 61 KQVTCLHDFFGDDDVFIACGP 81 >2DNF-A nrPDB Length = 108 Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 28/85 (32%), Positives = 47/85 (55%), Gaps = 1/85 (1%) Query: 174 KDFVRPKLVTIIRSGVKPRKAVRVLLNKKTAHSFEQVLTDITEAIKLETGVVKKLYTLDG 233 K P + +I +G A R+L+ +KT + ++ VL +TE I L +G V +LYTL+G Sbjct: 9 KPLQEPCTIFLIANGDLINPASRLLIPRKTLNQWDHVLQMVTEKITLRSGAVHRLYTLEG 68 Query: 234 KQVTCLHDFFGDDDVFIACGPEKFR 258 K V + + ++A G +KF+ Sbjct: 69 KLVESGAE-LENGQFYVAVGRDKFK 92 Score = 30.0 bits (66), Expect = 1.7, Method: Compositional matrix adjust. Identities = 18/53 (33%), Positives = 31/53 (58%), Gaps = 2/53 (3%) Query: 87 LTRSLSDNINLPQG-VRYIYTIDGSRKIGSMDELEEGESYVCSSDNFFKKVEY 138 + + +++ I L G V +YT++G + + S ELE G+ YV + FKK+ Y Sbjct: 45 VLQMVTEKITLRSGAVHRLYTLEG-KLVESGAELENGQFYVAVGRDKFKKLPY 96 >5Y9F-A nrPDB Length = 500 Score = 29.3 bits (64), Expect = 2.9, Method: Compositional matrix adjust. Identities = 17/52 (32%), Positives = 22/52 (42%) Query: 255 EKFRYAQDDFSLDENECRVMKGNPSATAGPKASPTPQKTSAKSPGPMRRSKS 306 E+F D F L + P T GP+ P TS SP ++R KS Sbjct: 446 ERFSADLDQFPLGRKFLLQLGARPKPTIGPRKRAAPAPTSTPSPKRVKRRKS 497 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 4ATU-I nrPDB 679 0.0 2BQQ-A nrPDB 220 6e-58 5IO9-A nrPDB 208 3e-54 1MFW-A nrPDB 207 6e-54 5IP4-D nrPDB 171 5e-43 6FNZ-A nrPDB 149 1e-36 2DNF-A nrPDB 142 2e-34 Sequences not found previously or not previously below threshold: 6B4A-A nrPDB 40 0.001 5Y9F-A nrPDB 34 0.11 6CT0-0 nrPDB 32 0.35 6FF4-Y nrPDB 31 0.70 4N78-F nrPDB 31 0.91 1OQY-A nrPDB 30 2.1 2BKJ-A nrPDB 29 3.1 6GRI-C nrPDB 29 4.1 >4ATU-I nrPDB Length = 373 Score = 679 bits (1751), Expect = 0.0, Method: Composition-based stats. Identities = 359/364 (98%), Positives = 359/364 (98%), Gaps = 5/364 (1%) Query: 2 ELDFGHFDERDKTSRNMRGSRMNGLPSPTHSAHCSFYRTRTLQALSNEKKAKKVRFYRNG 61 ELDFGHFDERDKTSRNMRGSRMNGLPSPTHSAHCSFYRTRTLQALSNEKKAKKVRFYRNG Sbjct: 15 ELDFGHFDERDKTSRNMRGSRMNGLPSPTHSAHCSFYRTRTLQALSNEKKAKKVRFYRNG 74 Query: 62 DRYFKGIVYAVSSDRFRSFDALLADLTRSLSDNINLPQGVRYIYTIDGSRKIGSMDELEE 121 DRYFKGIVYAVSSDRFRSFDALLADLTRSLSDNINLPQGVRYIYTIDGSRKIGSMDELEE Sbjct: 75 DRYFKGIVYAVSSDRFRSFDALLADLTRSLSDNINLPQGVRYIYTIDGSRKIGSMDELEE 134 Query: 122 GESYVCSSDNFFKKVEYTKNVNPNWSVNVKTSANMKAPQSLASSNSAQARENKDFVRPKL 181 GESYVCSSDNFFKKVEYTKNVNPNWSVNVKTSANMKAPQSLASSNSAQARENKDFVRPKL Sbjct: 135 GESYVCSSDNFFKKVEYTKNVNPNWSVNVKTSANMKAPQSLASSNSAQARENKDFVRPKL 194 Query: 182 VTIIRSGVKPRKAVRVLLNKKTAHSFEQVLTDITEAIKLETGVVKKLYTLDGKQVTCLHD 241 VTIIRSGVKPRKAVRVLLNKKTAHSFEQVLTDITEAIKLETGVVKKLYTLDGKQVTCLHD Sbjct: 195 VTIIRSGVKPRKAVRVLLNKKTAHSFEQVLTDITEAIKLETGVVKKLYTLDGKQVTCLHD 254 Query: 242 FFGDDDVFIACGPEKFRYAQDDFSLDENECRVMKGNPSATAGPKASPTPQKTSAKSPGPM 301 FFGDDDVFIACGPEKFRYAQDDFSLDENECRVMKGNPSATAGPKASPTPQKTSAKSPGPM Sbjct: 255 FFGDDDVFIACGPEKFRYAQDDFSLDENECRVMKGNPSATAGPKASPTPQKTSAKSPGPM 314 Query: 302 RRSKSPADSGNDQDANGTSSSQLSTPKSKQSPISTPTSPGSLRKHKDLYLPLSLDDSDSL 361 RRSKSPADS ANGTSSSQLSTPKSKQSPISTPTSPGSLRKHKDLYLPLSLDDSDSL Sbjct: 315 RRSKSPADS-----ANGTSSSQLSTPKSKQSPISTPTSPGSLRKHKDLYLPLSLDDSDSL 369 Query: 362 GDSM 365 GDSM Sbjct: 370 GDSM 373 >2BQQ-A nrPDB Length = 113 Score = 220 bits (561), Expect = 6e-58, Method: Composition-based stats. Identities = 104/106 (98%), Positives = 104/106 (98%) Query: 45 ALSNEKKAKKVRFYRNGDRYFKGIVYAVSSDRFRSFDALLADLTRSLSDNINLPQGVRYI 104 ALSNEKKAKKVRFYRNGDRYFKGIVYAVSSDRFRSFDALLADLTRSLSDNINLPQGVRYI Sbjct: 8 ALSNEKKAKKVRFYRNGDRYFKGIVYAVSSDRFRSFDALLADLTRSLSDNINLPQGVRYI 67 Query: 105 YTIDGSRKIGSMDELEEGESYVCSSDNFFKKVEYTKNVNPNWSVNV 150 YTIDGSRKIGSMDELEEGESYVCSSDNFF VEYTKNVNPNWSVNV Sbjct: 68 YTIDGSRKIGSMDELEEGESYVCSSDNFFDDVEYTKNVNPNWSVNV 113 Score = 33.9 bits (76), Expect = 0.099, Method: Composition-based stats. Identities = 21/84 (25%), Positives = 40/84 (47%), Gaps = 6/84 (7%) Query: 178 RPKLVTIIRSGVKPRKAVRVLLNKKTAHSFEQVLTDIT----EAIKLETGVVKKLYTLDG 233 + K V R+G + K + ++ SF+ +L D+T + I L G V+ +YT+DG Sbjct: 14 KAKKVRFYRNGDRYFKGIVYAVSSDRFRSFDALLADLTRSLSDNINLPQG-VRYIYTIDG 72 Query: 234 KQVTCLHDFFGDDDVFIACGPEKF 257 + D + + ++ C + F Sbjct: 73 SRKIGSMDELEEGESYV-CSSDNF 95 >5IO9-A nrPDB Length = 106 Score = 208 bits (529), Expect = 3e-54, Method: Composition-based stats. Identities = 96/98 (97%), Positives = 96/98 (97%) Query: 52 AKKVRFYRNGDRYFKGIVYAVSSDRFRSFDALLADLTRSLSDNINLPQGVRYIYTIDGSR 111 AKKVRFYRNGDRYFKGIVYAVSSDRFRSFDALLADLTRSLSDNINLPQGVRYIYTIDGSR Sbjct: 9 AKKVRFYRNGDRYFKGIVYAVSSDRFRSFDALLADLTRSLSDNINLPQGVRYIYTIDGSR 68 Query: 112 KIGSMDELEEGESYVCSSDNFFKKVEYTKNVNPNWSVN 149 KIGSMDELEEGESYVCSSDNFF VEYTKNVNPNWSVN Sbjct: 69 KIGSMDELEEGESYVCSSDNFFDDVEYTKNVNPNWSVN 106 Score = 34.3 bits (77), Expect = 0.089, Method: Composition-based stats. Identities = 21/82 (25%), Positives = 39/82 (47%), Gaps = 6/82 (7%) Query: 180 KLVTIIRSGVKPRKAVRVLLNKKTAHSFEQVLTDIT----EAIKLETGVVKKLYTLDGKQ 235 K V R+G + K + ++ SF+ +L D+T + I L G V+ +YT+DG + Sbjct: 10 KKVRFYRNGDRYFKGIVYAVSSDRFRSFDALLADLTRSLSDNINLPQG-VRYIYTIDGSR 68 Query: 236 VTCLHDFFGDDDVFIACGPEKF 257 D + + ++ C + F Sbjct: 69 KIGSMDELEEGESYV-CSSDNF 89 >1MFW-A nrPDB Length = 107 Score = 207 bits (527), Expect = 6e-54, Method: Composition-based stats. Identities = 88/105 (83%), Positives = 96/105 (91%) Query: 46 LSNEKKAKKVRFYRNGDRYFKGIVYAVSSDRFRSFDALLADLTRSLSDNINLPQGVRYIY 105 LS+EKKAKKVRFYRNGDRYFKGIVYA+S DRFRSF+ALLADLTR+LSDN+NLPQGVR IY Sbjct: 3 LSSEKKAKKVRFYRNGDRYFKGIVYAISPDRFRSFEALLADLTRTLSDNVNLPQGVRTIY 62 Query: 106 TIDGSRKIGSMDELEEGESYVCSSDNFFKKVEYTKNVNPNWSVNV 150 TIDG +KI SMD+L EGESYVC S FKK+EYTKNVNPNWSVNV Sbjct: 63 TIDGLKKISSMDQLVEGESYVCGSIEPFKKLEYTKNVNPNWSVNV 107 Score = 33.1 bits (74), Expect = 0.20, Method: Composition-based stats. Identities = 21/85 (24%), Positives = 40/85 (47%), Gaps = 5/85 (5%) Query: 178 RPKLVTIIRSGVKPRKAVRVLLNKKTAHSFEQVLTDIT----EAIKLETGVVKKLYTLDG 233 + K V R+G + K + ++ SFE +L D+T + + L G V+ +YT+DG Sbjct: 8 KAKKVRFYRNGDRYFKGIVYAISPDRFRSFEALLADLTRTLSDNVNLPQG-VRTIYTIDG 66 Query: 234 KQVTCLHDFFGDDDVFIACGPEKFR 258 + D + + ++ E F+ Sbjct: 67 LKKISSMDQLVEGESYVCGSIEPFK 91 >5IP4-D nrPDB Length = 91 Score = 171 bits (433), Expect = 5e-43, Method: Composition-based stats. Identities = 91/91 (100%), Positives = 91/91 (100%) Query: 170 ARENKDFVRPKLVTIIRSGVKPRKAVRVLLNKKTAHSFEQVLTDITEAIKLETGVVKKLY 229 ARENKDFVRPKLVTIIRSGVKPRKAVRVLLNKKTAHSFEQVLTDITEAIKLETGVVKKLY Sbjct: 1 ARENKDFVRPKLVTIIRSGVKPRKAVRVLLNKKTAHSFEQVLTDITEAIKLETGVVKKLY 60 Query: 230 TLDGKQVTCLHDFFGDDDVFIACGPEKFRYA 260 TLDGKQVTCLHDFFGDDDVFIACGPEKFRYA Sbjct: 61 TLDGKQVTCLHDFFGDDDVFIACGPEKFRYA 91 Score = 30.1 bits (66), Expect = 1.6, Method: Composition-based stats. Identities = 21/84 (25%), Positives = 40/84 (47%), Gaps = 6/84 (7%) Query: 51 KAKKVRFYRNGDRYFKGIVYAVSSDRFRSFDALLADLTRSLSDNINLPQG-VRYIYTIDG 109 + K V R+G + K + ++ SF+ +L D+T + I L G V+ +YT+DG Sbjct: 9 RPKLVTIIRSGVKPRKAVRVLLNKKTAHSFEQVLTDITEA----IKLETGVVKKLYTLDG 64 Query: 110 SRKIGSMDELEEGESYV-CSSDNF 132 + D + + ++ C + F Sbjct: 65 KQVTCLHDFFGDDDVFIACGPEKF 88 >6FNZ-A nrPDB Length = 81 Score = 149 bits (377), Expect = 1e-36, Method: Composition-based stats. Identities = 81/81 (100%), Positives = 81/81 (100%) Query: 174 KDFVRPKLVTIIRSGVKPRKAVRVLLNKKTAHSFEQVLTDITEAIKLETGVVKKLYTLDG 233 KDFVRPKLVTIIRSGVKPRKAVRVLLNKKTAHSFEQVLTDITEAIKLETGVVKKLYTLDG Sbjct: 1 KDFVRPKLVTIIRSGVKPRKAVRVLLNKKTAHSFEQVLTDITEAIKLETGVVKKLYTLDG 60 Query: 234 KQVTCLHDFFGDDDVFIACGP 254 KQVTCLHDFFGDDDVFIACGP Sbjct: 61 KQVTCLHDFFGDDDVFIACGP 81 Score = 28.5 bits (62), Expect = 4.2, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 5/62 (8%) Query: 51 KAKKVRFYRNGDRYFKGIVYAVSSDRFRSFDALLADLTRSLSDNINLPQG-VRYIYTIDG 109 + K V R+G + K + ++ SF+ +L D+T + I L G V+ +YT+DG Sbjct: 5 RPKLVTIIRSGVKPRKAVRVLLNKKTAHSFEQVLTDITEA----IKLETGVVKKLYTLDG 60 Query: 110 SR 111 + Sbjct: 61 KQ 62 >2DNF-A nrPDB Length = 108 Score = 142 bits (358), Expect = 2e-34, Method: Composition-based stats. Identities = 29/92 (31%), Positives = 50/92 (54%), Gaps = 1/92 (1%) Query: 167 SAQARENKDFVRPKLVTIIRSGVKPRKAVRVLLNKKTAHSFEQVLTDITEAIKLETGVVK 226 S+ + K P + +I +G A R+L+ +KT + ++ VL +TE I L +G V Sbjct: 2 SSGSSGRKPLQEPCTIFLIANGDLINPASRLLIPRKTLNQWDHVLQMVTEKITLRSGAVH 61 Query: 227 KLYTLDGKQVTCLHDFFGDDDVFIACGPEKFR 258 +LYTL+GK V + + ++A G +KF+ Sbjct: 62 RLYTLEGKLVESGAE-LENGQFYVAVGRDKFK 92 Score = 30.4 bits (67), Expect = 1.2, Method: Composition-based stats. Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 2/49 (4%) Query: 91 LSDNINLPQG-VRYIYTIDGSRKIGSMDELEEGESYVCSSDNFFKKVEY 138 +++ I L G V +YT++G + + S ELE G+ YV + FKK+ Y Sbjct: 49 VTEKITLRSGAVHRLYTLEG-KLVESGAELENGQFYVAVGRDKFKKLPY 96 >6B4A-A nrPDB Length = 104 Score = 40.5 bits (93), Expect = 0.001, Method: Composition-based stats. Identities = 21/84 (25%), Positives = 42/84 (50%), Gaps = 8/84 (9%) Query: 57 FYRNGDRYFKGIVYAVSSDRFRSFDALLADLTRSLSDNINLPQGVRYIYTIDGSRKIGSM 116 YRNGD++ G + V +S ++L +T+ ++ + VR I+ R I + Sbjct: 17 LYRNGDKHDDGTPFFVRP-YIKSMESLYQQITKEITP---IAGPVRRIFD-QNFRVITDL 71 Query: 117 DELEEGESYVCSSDNF---FKKVE 137 D++ +G Y+C+S + ++E Sbjct: 72 DDIVDGAKYLCTSGEPPAAYDRLE 95 >5Y9F-A nrPDB Length = 500 Score = 33.9 bits (76), Expect = 0.11, Method: Composition-based stats. Identities = 17/53 (32%), Positives = 22/53 (41%) Query: 254 PEKFRYAQDDFSLDENECRVMKGNPSATAGPKASPTPQKTSAKSPGPMRRSKS 306 E+F D F L + P T GP+ P TS SP ++R KS Sbjct: 445 KERFSADLDQFPLGRKFLLQLGARPKPTIGPRKRAAPAPTSTPSPKRVKRRKS 497 >6CT0-0 nrPDB Length = 647 Score = 32.4 bits (72), Expect = 0.35, Method: Composition-based stats. Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 5/76 (6%) Query: 281 TAGPKASPTPQKTSAKSPGPMRRSKSPADSGNDQDANGTSSSQLSTPKSKQSPISTPTSP 340 TA + TP+ TS P P RR+ G + G + S +TP+++ + SP Sbjct: 23 TALQEVPGTPRVTSRSGPAPARRNSVTTGYGGVRALCGWTPSSGATPRNRLL-LQLLGSP 81 Query: 341 G----SLRKHKDLYLP 352 G SL H+ + LP Sbjct: 82 GRRYYSLPPHQKVPLP 97 >6FF4-Y nrPDB Length = 904 Score = 31.2 bits (69), Expect = 0.70, Method: Composition-based stats. Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 6/61 (9%) Query: 287 SPTPQKTSAKSPGPMRRSKSPADSGNDQDANGTSSSQLSTPKSKQSPISTPTSPGSLRKH 346 SP P++ +A P P +R SP+ + S PK + SP++ SP KH Sbjct: 607 SPPPKRRTASPPPPPKRRASPSPPPKRRV------SHSPPPKQRSSPVTKRRSPSLSSKH 660 Query: 347 K 347 + Sbjct: 661 R 661 >4N78-F nrPDB Length = 514 Score = 30.8 bits (68), Expect = 0.91, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 5/63 (7%) Query: 280 ATAGPKASPTPQKTSAKSPGPMRRSKSPADSGNDQDANG--TSSSQLSTPKSKQSPISTP 337 A AG +P TSA +P P+ + P+ + D A G T + ++P P+ + Sbjct: 285 APAGSAGTPPLPATSASAPAPLVPATVPSSTAPDAAAGGAQTLADGFTSP---TPPVVSS 341 Query: 338 TSP 340 T P Sbjct: 342 TPP 344 >1OQY-A nrPDB Length = 368 Score = 29.7 bits (65), Expect = 2.1, Method: Composition-based stats. Identities = 17/73 (23%), Positives = 33/73 (45%), Gaps = 7/73 (9%) Query: 263 DFSLDENECRVM-----KGNPSATAGPKASPT--PQKTSAKSPGPMRRSKSPADSGNDQD 315 D+ +DE V+ K +A P+ASPT P+ +++ P P P + + Sbjct: 68 DYRIDEKNFVVVMVTKTKAGQGTSAPPEASPTAAPESSTSFPPAPTSGMSHPPPAAREDK 127 Query: 316 ANGTSSSQLSTPK 328 + S+ ++P+ Sbjct: 128 SPSEESAPTTSPE 140 >2BKJ-A nrPDB Length = 240 Score = 29.3 bits (64), Expect = 3.1, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 26/67 (38%) Query: 299 GPMRRSKSPADSGNDQDANGTSSSQLSTPKSKQSPISTPTSPGSLRKHKDLYLPLSLDDS 358 G +R S + D N + Q+P P P + H++ Y L+LDD Sbjct: 130 GGLRNSAAQVDELLGLPENSAVLFGMCLGHPDQNPEVKPRLPAHVVVHENQYQELNLDDI 189 Query: 359 DSLGDSM 365 S +M Sbjct: 190 QSYDQTM 196 >6GRI-C nrPDB Length = 272 Score = 28.9 bits (63), Expect = 4.1, Method: Composition-based stats. Identities = 20/77 (25%), Positives = 31/77 (40%) Query: 286 ASPTPQKTSAKSPGPMRRSKSPADSGNDQDANGTSSSQLSTPKSKQSPISTPTSPGSLRK 345 A +P S + P P + P + + + T + Q T P+S P + Sbjct: 107 AFSSPDPGSVRRPYPSGGALYPIEVFLCRLSENTENWQAGTNVYHYLPLSQALEPVATCN 166 Query: 346 HKDLYLPLSLDDSDSLG 362 + LY LS DS+ LG Sbjct: 167 TQSLYRSLSGGDSERLG 183 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.306 0.132 0.381 Lambda K H 0.267 0.0387 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 13,700,379 Number of Sequences: 36641 Number of extensions: 523838 Number of successful extensions: 1048 Number of sequences better than 10.0: 23 Number of HSP's better than 10.0 without gapping: 23 Number of HSP's successfully gapped in prelim test: 17 Number of HSP's that attempted gapping in prelim test: 947 Number of HSP's gapped (non-prelim): 93 length of query: 365 length of database: 10,336,785 effective HSP length: 98 effective length of query: 267 effective length of database: 6,745,967 effective search space: 1801173189 effective search space used: 1801173189 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.4 bits) S2: 60 (27.8 bits)