BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= O43143 (795 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 6ID1-V nrPDB 1664 0.0 5XDR-A nrPDB 1434 0.0 5I8Q-A nrPDB 907 0.0 5D0U-A nrPDB 889 0.0 6I3O-A nrPDB 675 0.0 6FA9-A nrPDB 627 e-180 5GM6-Y nrPDB 537 e-153 5N8S-A nrPDB 341 8e-94 5VHD-D nrPDB 328 4e-90 6HEG-A nrPDB 228 5e-60 3I4U-A nrPDB 214 1e-55 3LLM-A nrPDB 119 4e-27 5WSO-A nrPDB 76 5e-14 4CBI-A nrPDB 76 6e-14 5WX1-A nrPDB 74 2e-13 2JJ9-A nrPDB 37 0.024 3MKD-A nrPDB 37 0.024 2B0U-A nrPDB 35 0.16 2Z83-A nrPDB 34 0.23 5OVO-B nrPDB 34 0.24 2V8O-A nrPDB 33 0.37 5HLY-A nrPDB 32 0.82 4BYF-A nrPDB 32 0.86 2WV9-A nrPDB 32 0.95 1QON-A nrPDB 32 0.99 2V9T-B nrPDB 31 2.2 2QEQ-A nrPDB 31 2.7 2ZKI-A nrPDB 30 2.9 4Y68-C nrPDB 30 3.7 2VVF-A nrPDB 30 5.3 3SYK-A nrPDB 29 7.5 >6ID1-V nrPDB Length = 795 Score = 1664 bits (4308), Expect = 0.0, Method: Compositional matrix adjust. Identities = 795/795 (100%), Positives = 795/795 (100%) Query: 1 MSKRHRLDLGEDYPSGKKRAGTDGKDRDRDRDREDRSKDRDRERDRGDREREREKEKEKE 60 MSKRHRLDLGEDYPSGKKRAGTDGKDRDRDRDREDRSKDRDRERDRGDREREREKEKEKE Sbjct: 1 MSKRHRLDLGEDYPSGKKRAGTDGKDRDRDRDREDRSKDRDRERDRGDREREREKEKEKE 60 Query: 61 LRASTNAMLISAGLPPLKASHSAHSTHSAHSTHSTHSAHSTHAGHAGHTSLPQCINPFTN 120 LRASTNAMLISAGLPPLKASHSAHSTHSAHSTHSTHSAHSTHAGHAGHTSLPQCINPFTN Sbjct: 61 LRASTNAMLISAGLPPLKASHSAHSTHSAHSTHSTHSAHSTHAGHAGHTSLPQCINPFTN 120 Query: 121 LPHTPRYYDILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRS 180 LPHTPRYYDILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRS Sbjct: 121 LPHTPRYYDILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRS 180 Query: 181 LPGPKRGVACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGM 240 LPGPKRGVACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGM Sbjct: 181 LPGPKRGVACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGM 240 Query: 241 LLREAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKF 300 LLREAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKF Sbjct: 241 LLREAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKF 300 Query: 301 QIYFDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQE 360 QIYFDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQE Sbjct: 301 QIYFDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQE 360 Query: 361 EIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVS 420 EIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVS Sbjct: 361 EIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVS 420 Query: 421 TNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGK 480 TNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGK Sbjct: 421 TNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGK 480 Query: 481 CFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRAL 540 CFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRAL Sbjct: 481 CFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRAL 540 Query: 541 ELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITAMLSVPQCF 600 ELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITAMLSVPQCF Sbjct: 541 ELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITAMLSVPQCF 600 Query: 601 VRPTEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQNHESVQWCYDNFINYRSLMSADNV 660 VRPTEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQNHESVQWCYDNFINYRSLMSADNV Sbjct: 601 VRPTEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQNHESVQWCYDNFINYRSLMSADNV 660 Query: 661 RQQLSRIMDRFNLPRRSTDFTSRDYYINIRKALVTGYFMQVAHLERTGHYLTVKDNQVVQ 720 RQQLSRIMDRFNLPRRSTDFTSRDYYINIRKALVTGYFMQVAHLERTGHYLTVKDNQVVQ Sbjct: 661 RQQLSRIMDRFNLPRRSTDFTSRDYYINIRKALVTGYFMQVAHLERTGHYLTVKDNQVVQ 720 Query: 721 LHPSTVLDHKPEWVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPQYYDMSNFPQCEAKRQL 780 LHPSTVLDHKPEWVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPQYYDMSNFPQCEAKRQL Sbjct: 721 LHPSTVLDHKPEWVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPQYYDMSNFPQCEAKRQL 780 Query: 781 DRIIAKLQSKEYSQY 795 DRIIAKLQSKEYSQY Sbjct: 781 DRIIAKLQSKEYSQY 795 >5XDR-A nrPDB Length = 690 Score = 1434 bits (3711), Expect = 0.0, Method: Compositional matrix adjust. Identities = 685/686 (99%), Positives = 686/686 (100%) Query: 110 SLPQCINPFTNLPHTPRYYDILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQ 169 SLPQCINPFTNLPHTPRYYDILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQ Sbjct: 5 SLPQCINPFTNLPHTPRYYDILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQ 64 Query: 170 IPQWCVEYMRSLPGPKRGVACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSA 229 IPQWCVEYMRSLPGPKRGVACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSA Sbjct: 65 IPQWCVEYMRSLPGPKRGVACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSA 124 Query: 230 KTILKYMTDGMLLREAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVI 289 KTILKYMTDGMLLREAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVI Sbjct: 125 KTILKYMTDGMLLREAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVI 184 Query: 290 VMSATLDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEE 349 VMSATLDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEE Sbjct: 185 VMSATLDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEE 244 Query: 350 GDLLLFLTGQEEIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQ 409 GDLLLFLTGQEEIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQ Sbjct: 245 GDLLLFLTGQEEIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQ 304 Query: 410 NGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQR 469 NGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQR Sbjct: 305 NGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQR 364 Query: 470 AGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMD 529 AGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMD Sbjct: 365 AGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMD 424 Query: 530 PPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLS 589 PPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLS Sbjct: 425 PPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLS 484 Query: 590 ITAMLSVPQCFVRPTEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQNHESVQWCYDNFI 649 ITAMLSVPQCFVRPTEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQNHESVQWCYDNFI Sbjct: 485 ITAMLSVPQCFVRPTEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQNHESVQWCYDNFI 544 Query: 650 NYRSLMSADNVRQQLSRIMDRFNLPRRSTDFTSRDYYINIRKALVTGYFMQVAHLERTGH 709 NYRSLMSADNVRQQLSRIMDRFNLPRRS+DFTSRDYYINIRKALVTGYFMQVAHLERTGH Sbjct: 545 NYRSLMSADNVRQQLSRIMDRFNLPRRSSDFTSRDYYINIRKALVTGYFMQVAHLERTGH 604 Query: 710 YLTVKDNQVVQLHPSTVLDHKPEWVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPQYYDMS 769 YLTVKDNQVVQLHPSTVLDHKPEWVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPQYYDMS Sbjct: 605 YLTVKDNQVVQLHPSTVLDHKPEWVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPQYYDMS 664 Query: 770 NFPQCEAKRQLDRIIAKLQSKEYSQY 795 NFPQCEAKRQLDRIIAKLQSKEYSQY Sbjct: 665 NFPQCEAKRQLDRIIAKLQSKEYSQY 690 >5I8Q-A nrPDB Length = 767 Score = 907 bits (2343), Expect = 0.0, Method: Compositional matrix adjust. Identities = 448/682 (65%), Positives = 547/682 (80%), Gaps = 14/682 (2%) Query: 115 INPFTNLPHTPRYYDILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWC 174 INPFT TP+Y DILK R +LPV +D F + +Q V VGETGSGKTTQIPQ+ Sbjct: 71 INPFTGREFTPKYVDILKIRRELPVHAQRDEFLKLYQNNQIMVFVGETGSGKTTQIPQFV 130 Query: 175 V-EYMRSLPGPKRGVACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTIL 233 + + M L + VACTQPRRVAAMSVAQRVA+EMDV LG+EVGYSIRFE+ +S KTIL Sbjct: 131 LFDEMPHLENTQ--VACTQPRRVAAMSVAQRVAEEMDVKLGEEVGYSIRFENKTSNKTIL 188 Query: 234 KYMTDGMLLREAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSA 293 KYMTDGMLLREAM D L RY IILDEAHERTLATDILMG+LK+VV++R DLK+I+MSA Sbjct: 189 KYMTDGMLLREAMEDHDLSRYSCIILDEAHERTLATDILMGLLKQVVKRRPDLKIIIMSA 248 Query: 294 TLDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLL 353 TLDA KFQ YF++ PLL +PGRT+PVE++YTPE +RDYL++AIRTV+QIH EE GD+L Sbjct: 249 TLDAEKFQRYFNDAPLLAVPGRTYPVELYYTPEFQRDYLDSAIRTVLQIH-ATEEAGDIL 307 Query: 354 LFLTGQEEIDEACKRIKREVDDLGPE--VGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNG 411 LFLTG++EI++A ++I E D L E G + + PLY +LPP QQQRIFEP P + NG Sbjct: 308 LFLTGEDEIEDAVRKISLEGDQLVREEGCGPLSVYPLYGSLPPHQQQRIFEPAP-ESHNG 366 Query: 412 AIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAG 471 GRKVV+STNIAETSLTIDG+V+V+DPGF+KQKVYNPRIRVESLLV+ ISKASAQQRAG Sbjct: 367 RPGRKVVISTNIAETSLTIDGIVYVVDPGFSKQKVYNPRIRVESLLVSPISKASAQQRAG 426 Query: 472 RAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPP 531 RAGRTRPGKCFRLYTE+A++ E+ + +YPEILRSNL S VL+LKKLGIDDLVHFDFMDPP Sbjct: 427 RAGRTRPGKCFRLYTEEAFQKELIEQSYPEILRSNLSSTVLELKKLGIDDLVHFDFMDPP 486 Query: 532 APETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSIT 591 APET+MRALE LNYLA L+D+G+LT LG + ++FPLDP LA M+I S ++ CS E+L+I Sbjct: 487 APETMMRALEELNYLACLDDEGNLTPLGRLASQFPLDPMLAVMLIGSFEFQCSQEILTIV 546 Query: 592 AMLSVPQCFVRPTEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQNHESV----QWCYDN 647 AMLSVP F+RPT+ KK AD+AK FAH DGDH+TLLNVYHAFK + +WC D+ Sbjct: 547 AMLSVPNVFIRPTKDKKRADDAKNIFAHPDGDHITLLNVYHAFKSDEAYEYGIHKWCRDH 606 Query: 648 FINYRSLMSADNVRQQLSRIMDRFNLPRRSTDFTSRDYYINIRKALVTGYFMQVAHLERT 707 ++NYRSL +ADN+R QL R+M+R+NL +TD+ S Y+ NIRKAL +G+FMQVA +R+ Sbjct: 607 YLNYRSLSAADNIRSQLERLMNRYNLELNTTDYESPKYFDNIRKALASGFFMQVAK-KRS 665 Query: 708 GH--YLTVKDNQVVQLHPSTVLDHKPEWVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPQY 765 G Y+TVKDNQ V +HPSTVL H EWV+YNEFVLT+KNYIRT T ++PEWL++IAP Y Sbjct: 666 GAKGYITVKDNQDVLIHPSTVLGHDAEWVIYNEFVLTSKNYIRTVTSVRPEWLIEIAPAY 725 Query: 766 YDMSNFPQCEAKRQLDRIIAKL 787 YD+SNF + + K L+RI K+ Sbjct: 726 YDLSNFQKGDVKLSLERIKEKV 747 >5D0U-A nrPDB Length = 714 Score = 889 bits (2297), Expect = 0.0, Method: Compositional matrix adjust. Identities = 437/687 (63%), Positives = 541/687 (78%), Gaps = 13/687 (1%) Query: 115 INPFTNLPHTPRYYDILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWC 174 INP+T H+ RY+ ILK R +LPV + + F D+ +Q V VGETGSGKTTQIPQ+ Sbjct: 16 INPWTGQRHSERYFKILKARRKLPVNKQRQEFLDLYHNNQILVFVGETGSGKTTQIPQYV 75 Query: 175 VEYMRSLP-GPKRGVACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTIL 233 + LP + +ACTQPRRVAAMSVAQRVADE+DV LG+EVGYSIRFE+ +S+KT+L Sbjct: 76 L--YDELPHQTGKLIACTQPRRVAAMSVAQRVADELDVKLGEEVGYSIRFENKTSSKTLL 133 Query: 234 KYMTDGMLLREAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSA 293 KYMTDG LLREAM+D + RY IILDEAHERTLATDILM +LK++ +R DLK+IVMSA Sbjct: 134 KYMTDGQLLREAMHDRDMSRYSCIILDEAHERTLATDILMALLKQLSERRKDLKIIVMSA 193 Query: 294 TLDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLL 353 TLDA KFQ YF N PLL +PGRTHPVEIFYTPE ERDY+EAAIRTV+QIH CE E GD+L Sbjct: 194 TLDAQKFQSYFFNAPLLAVPGRTHPVEIFYTPEAERDYVEAAIRTVLQIHACEPE-GDIL 252 Query: 354 LFLTGQEEIDEACKRIKREVDDLGPE--VGDIKIIPLYSTLPPQQQQRIFEPPP-PKKQN 410 LFLTG+EEI++AC+RI EVD++ E G + + PLY TLPP QQQRIFE P P + Sbjct: 253 LFLTGEEEIEDACRRISLEVDEMIRESDAGPMSVYPLYGTLPPHQQQRIFEKAPQPFRPG 312 Query: 411 GAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRA 470 G GRK +V+TNIAETSLTIDG+V+V+DPGF+KQK+YNPR RVESLLV+ ISKASAQQRA Sbjct: 313 GRPGRKCIVATNIAETSLTIDGIVYVVDPGFSKQKIYNPRTRVESLLVSPISKASAQQRA 372 Query: 471 GRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDP 530 GRAGRTRPGKCFRLYTE+A+K E+ + TYPEILRSNL + VL+LKKLG++DLVHFD MDP Sbjct: 373 GRAGRTRPGKCFRLYTEEAFKKELIEQTYPEILRSNLSNTVLELKKLGVEDLVHFDLMDP 432 Query: 531 PAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSI 590 PAPET+MRALE LNYLA L+DDG+LT LG++ +EFPLDP LA M+I+S ++ CSNE+LSI Sbjct: 433 PAPETMMRALEELNYLACLDDDGELTPLGNLASEFPLDPALAVMLISSPEFYCSNEILSI 492 Query: 591 TAMLSVPQCFVRPTEAKKAADEAKMRFAHIDGDHLTLLNVYHAFK----QNHESVQWCYD 646 T++LSVPQ +VRP A+K ADE K +FAH DGDHLTLLN YHA+K + + +WC++ Sbjct: 493 TSLLSVPQIWVRPANARKRADEMKAQFAHPDGDHLTLLNAYHAYKGAEARGEDMKKWCHE 552 Query: 647 NFINYRSLMSADNVRQQLSRIMDRFNLPRRSTDFTSRDYYINIRKALVTGYFMQVAHLER 706 +F++YR L SADNVR QL +IM+ + ST F ++YY NIR+AL+ G+FMQVA E Sbjct: 553 HFLSYRHLSSADNVRAQLKKIMETHGIELVSTPFHDKNYYTNIRRALLAGFFMQVAMRES 612 Query: 707 TGH--YLTVKDNQVVQLHPSTVLDHKPEWVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPQ 764 + Y TVKD Q+V +HPST + EWV+YNEFVLTTK Y+RT T+I+PEWL++IAP Sbjct: 613 SNSKVYKTVKDEQLVLIHPSTTVTTPYEWVVYNEFVLTTKQYVRTVTNIRPEWLLEIAPV 672 Query: 765 YYDMSNFPQCEAKRQLDRIIAKLQSKE 791 YYD+S F + E K L R+ K++ ++ Sbjct: 673 YYDLSTFQKGEIKNALTRVAEKIRRQQ 699 >6I3O-A nrPDB Length = 677 Score = 675 bits (1742), Expect = 0.0, Method: Compositional matrix adjust. Identities = 341/659 (51%), Positives = 464/659 (70%), Gaps = 23/659 (3%) Query: 130 ILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGVA 189 I ++R LPV++++D+ + +Q ++VGETGSGKTTQ+ Q+ E + G + Sbjct: 5 IKEQRESLPVFQFRDQIIQAVKDNQILIVVGETGSGKTTQVTQYLAEAGFTKYG---MIG 61 Query: 190 CTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDP 249 CTQPRRVAA+SVA+RVA+E+ LGQEVGY+IRFED +S T +KYMTDGML RE + DP Sbjct: 62 CTQPRRVAAVSVAKRVAEEVGCQLGQEVGYTIRFEDVTSPATKIKYMTDGMLQREILMDP 121 Query: 250 LLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCPL 309 L+RY VI+LDEAHERT+ATD+L +LK+ V++R DLKVIV SATLDA KF YF++CP+ Sbjct: 122 DLKRYSVIMLDEAHERTIATDVLFALLKKTVKRRPDLKVIVTSATLDAEKFSEYFNSCPI 181 Query: 310 LTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRI 369 TIPGRT PVEI Y+ EPE DYLEAA+ TV+QIH+ E GD+L+FLTGQEEID AC+ + Sbjct: 182 FTIPGRTFPVEILYSREPEPDYLEAALTTVMQIHLTEPP-GDILVFLTGQEEIDTACEIL 240 Query: 370 KREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLT 429 + LGP V ++ I+P+YS LP + Q RIFEP PP RKVV++TNIAETS+T Sbjct: 241 YERMKALGPSVPELIILPIYSALPSEMQSRIFEPAPPG------SRKVVIATNIAETSIT 294 Query: 430 IDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKA 489 ID + +V+DPGF KQ Y+P++ ++SL+VT IS+A A QRAGRAGRT PGKCFRLYTE A Sbjct: 295 IDYIYYVVDPGFVKQNAYDPKLGMDSLVVTPISQAQANQRAGRAGRTGPGKCFRLYTEAA 354 Query: 490 YKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAAL 549 Y++EM T P+I R NL + +L LK +GI+DL+ FDFMDPP T++ ALE L L AL Sbjct: 355 YQSEMLPTTIPDIQRQNLANTILLLKAMGINDLLRFDFMDPPPVNTMLTALEELYALGAL 414 Query: 550 NDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITAMLSVPQCFVRPTEAKKA 609 +D+G LT LG MA+FP++P L+K++IAS D CS+E+++I +ML++ Q F RP + ++ Sbjct: 415 DDEGLLTRLGRKMADFPMEPSLSKVLIASVDKGCSDEMVTIVSMLNLQQIFYRPKDKQQQ 474 Query: 610 ADEAKMRFAHIDGDHLTLLNVYHAFKQNHESVQWCYDNFINYRSLMSADNVRQQLSRIMD 669 AD+ K +F GDHLTLLNVY+A+K + S WC++N+I R++ A +VRQQ+ +IM+ Sbjct: 475 ADQKKAKFHDPTGDHLTLLNVYNAWKNSGYSNAWCFENYIQARAMRRARDVRQQIVKIME 534 Query: 670 RFNLP----RRSTDFTSRDYYINIRKALVTGYFMQVAHLERTGHYLTVKDNQVVQLHPST 725 R P R TD IR+AL G+F A + Y T+ + V LHPS+ Sbjct: 535 RHRHPIISCGRDTD--------KIRQALCAGFFRNTARKDPQEGYKTLTEGTPVYLHPSS 586 Query: 726 VLDHK-PEWVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPQYYDMSNFPQCEAKRQLDRI 783 L K EWVLY+E VLTTK Y+ T I+P+WLV+ AP ++ ++ + +++ +RI Sbjct: 587 ALFGKQAEWVLYHELVLTTKEYMHFTTAIEPKWLVEAAPTFFKLAPTDRLSKRKKAERI 645 >6FA9-A nrPDB Length = 655 Score = 627 bits (1617), Expect = e-180, Method: Compositional matrix adjust. Identities = 328/639 (51%), Positives = 432/639 (67%), Gaps = 22/639 (3%) Query: 130 ILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVE--YMRSLPGPKRG 187 I + R LPV+ Y+D F D + +Q +LVGETGSGKTTQIPQ+ E Y + R Sbjct: 24 IQEVRKSLPVYAYRDAFLDAVKEYQVLILVGETGSGKTTQIPQYLHEAGYTKG----NRK 79 Query: 188 VACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMN 247 +ACTQPRRVAAMSVA RVADEM V LG EVGYSIRFEDC+S KTILKYMTDGMLLRE + Sbjct: 80 IACTQPRRVAAMSVAARVADEMGVRLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREMVT 139 Query: 248 DPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNC 307 P L Y I++DEAHERT+ TDIL+ ++K++ R R +L++I+ SATL+A KF YFD+ Sbjct: 140 SPDLADYSCIMIDEAHERTVHTDILLALIKDLTRARPELRLIISSATLNAEKFSAYFDDA 199 Query: 308 PLLTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACK 367 P+ +PGR HPVE++YT PE +YLEAA+ TV QIH + EGD+L+FLTGQEEI+ AC+ Sbjct: 200 PIFNVPGRVHPVEVYYTSAPESNYLEAALVTVFQIH-ATQPEGDILVFLTGQEEIERACE 258 Query: 368 RIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETS 427 R++ LG V +I +P+YS +P + Q +IFEP PP GA RKVV STNIAETS Sbjct: 259 RVEEIRRKLGKRVPEIIALPIYSNMPSEMQAKIFEPTPP----GA--RKVVFSTNIAETS 312 Query: 428 LTIDGVVFVIDPGFAKQKVYNP--RIRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLY 485 LTIDG+V+VID G+ K+ ++P +L V S+A+A QR GRAGR +PGKCFRLY Sbjct: 313 LTIDGIVYVIDSGYVKENTFSPVGTTGQSTLAVVPCSRAAANQRMGRAGRVKPGKCFRLY 372 Query: 486 TEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNY 545 T+ AY +EM ++ PEI R++L SVVLQLK LGIDDL+ FDF+DPP E L+++L +L Sbjct: 373 TKYAYLSEMDESPTPEIQRTSLSSVVLQLKALGIDDLLGFDFLDPPPTELLIKSLNMLYA 432 Query: 546 LAALNDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITAMLS-VPQCFVRPT 604 L ALN G LT +G M EFP +P LAK +IA+ C +EVL+I +ML V F RP Sbjct: 433 LGALNSAGQLTRVGRQMGEFPTEPMLAKALIAATQEGCVSEVLTIVSMLGEVGTLFFRPK 492 Query: 605 EAKKAADEAKMRFAHID-GDHLTLLNVYHAFKQNHESVQWCYDNFINYRSLMSADNVRQQ 663 + K AD A+ RF D GDHLTLLN+Y+ + + S W +NF+ RSL A +VR Q Sbjct: 493 DKKVHADSARARFTVRDGGDHLTLLNIYNQWVEAEYSPIWARENFLAQRSLTRARDVRDQ 552 Query: 664 LSRIMDRFNLPRRSTDFTSRDYYINIRKALVTGYFMQVAHLERTG-HYLTVKDNQVVQLH 722 L+++ DR L + I +AL +F+ A L R G Y T+K+N V +H Sbjct: 553 LAKLCDRI-LDGSEASCGGVNNPTPILRALTAAFFLNAARLNRAGDGYRTLKNNITVYVH 611 Query: 723 PSTV---LDHKPEWVLYNEFVLTTKNYIRTCTDIKPEWL 758 PS+V +D P+ ++Y+E V+T+K Y+R+ ++P WL Sbjct: 612 PSSVVRGMDPPPKVIIYHELVVTSKEYVRSVIPVEPRWL 650 >5GM6-Y nrPDB Length = 876 Score = 537 bits (1384), Expect = e-153, Method: Compositional matrix adjust. Identities = 288/664 (43%), Positives = 417/664 (62%), Gaps = 35/664 (5%) Query: 126 RYYDILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPK 185 R I + R LPV +YKD + ++Q +++GETGSGKTTQ+PQ+ VE + G K Sbjct: 212 RILTIQEARKLLPVHQYKDELLQEIKKNQVLIIMGETGSGKTTQLPQYLVEDGFTDQG-K 270 Query: 186 RGVACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSA-KTILKYMTDGMLLRE 244 +A TQPRRVAA SVA RVADEM+V+LG+EVGY IRFED ++ KT+LKYMTDGMLLRE Sbjct: 271 LQIAITQPRRVAATSVAARVADEMNVVLGKEVGYQIRFEDKTTPNKTVLKYMTDGMLLRE 330 Query: 245 AMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYF 304 + D L +Y I++DEAHERTLATDIL+G+LK+++ QR LK+++ SAT++A KF +F Sbjct: 331 FLTDSKLSKYSCIMIDEAHERTLATDILIGLLKDILPQRPTLKLLISSATMNAKKFSEFF 390 Query: 305 DNCPLLTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEIDE 364 DNCP+ +PGR +PV+I YT +PE +Y+ AAI T+ QIH + GD+L+FLTGQEEI+ Sbjct: 391 DNCPIFNVPGRRYPVDIHYTLQPEANYIHAAITTIFQIHTTQSLPGDILVFLTGQEEIER 450 Query: 365 ACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIA 424 +++ + LG + I P+Y+ LP +QQ +IF+P P RKVV++TNIA Sbjct: 451 TKTKLEEIMSKLGSRTKQMIITPIYANLPQEQQLKIFQPTPEN------CRKVVLATNIA 504 Query: 425 ETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCFRL 484 ETSLTIDG+ +VIDPGF K+ Y P + LL S+AS QRAGRAGR PGKCFR+ Sbjct: 505 ETSLTIDGIRYVIDPGFVKENSYVPSTGMTQLLTVPCSRASVDQRAGRAGRVGPGKCFRI 564 Query: 485 YTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLN 544 +T+ +Y E++ PEI R+NL + VL L LG+ DL+ F MD P+ TL ++LE L Sbjct: 565 FTKWSYLHELELMPKPEITRTNLSNTVLLLLSLGVTDLIKFPLMDKPSIPTLRKSLENLY 624 Query: 545 YLAALNDDGDLTELGSMMAEFPLDPQLAKMV-IASCDYNCSN---EVLSITAML-SVPQC 599 L ALN G +T LG MM EFP +P+ AK++ A+ C E L+I +ML P Sbjct: 625 ILGALNSKGTITRLGKMMCEFPCEPEFAKVLYTAATHEQCQGVLEECLTIVSMLHETPSL 684 Query: 600 FVRPTEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQNHESVQWCYDNFINYRSLMSADN 659 F+ + D A + ++ DH+ L +++ ++ + S WC D+ I +++++ N Sbjct: 685 FI-----GQKRDAAASVLSEVESDHILYLEIFNQWRNSKFSRSWCQDHKIQFKTMLRVRN 739 Query: 660 VRQQLSRIMDRFNLPRRS----TDFTSRDYYINIR--KALVTGYFMQVAHLERTGHYLTV 713 +R QL R ++ L ++ + YIN R + ++G+ M + L TG+ Sbjct: 740 IRNQLFRCSEKVGLVEKNDQARMKIGNIAGYINARITRCFISGFPMNIVQLGPTGYQTMG 799 Query: 714 KDNQ--VVQLHPSTVL--DHK------PEWVLYNEFVLTTKNYIRTCTDI-KPEWLVKIA 762 + + V +HP+++L +HK ++VLY + +LT+K +IR C I K EWL+ + Sbjct: 800 RSSGGLNVSVHPTSILFVNHKEKAQRPSKYVLYQQLMLTSKEFIRDCLVIPKEEWLIDMV 859 Query: 763 PQYY 766 PQ + Sbjct: 860 PQIF 863 >5N8S-A nrPDB Length = 944 Score = 341 bits (874), Expect = 8e-94, Method: Compositional matrix adjust. Identities = 229/679 (33%), Positives = 344/679 (50%), Gaps = 95/679 (13%) Query: 131 LKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGVA- 189 L+ R +LP +Y D + +Q ++VG TG GKTTQ+PQ ++ S RG A Sbjct: 147 LEARKKLPTMKYADDIIQAVRENQVILIVGSTGCGKTTQVPQILLDDAIS-----RGCAS 201 Query: 190 -----CTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSS-AKTILKYMTDGMLLR 243 CTQPRR++A+++A+ V+ E LG VGY IR E + + + Y T G+LL+ Sbjct: 202 SCRIICTQPRRISAIAIAEWVSYERCESLGNSVGYQIRLESRKARERASITYCTTGVLLQ 261 Query: 244 EAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIY 303 + +DPL+ V+ILDE HER++ TD+LMG+LK ++ R DLKVI+MSAT+ F Y Sbjct: 262 QLQSDPLMHNLSVLILDEIHERSVETDLLMGLLKVILPHRPDLKVILMSATVREQDFCDY 321 Query: 304 FDNCPLLTIPGRTHPVEIFYTPE----------------PERD----------YLEAAIR 337 F+NCP+ I G PV++ Y + P+RD +E +R Sbjct: 322 FNNCPMFRIEGVMFPVKMLYLEDVLSKTNYEFQKFRDRRPKRDPPERRMKHEAMIEPYLR 381 Query: 338 TV----------------------------IQIHMCEEE-EGDLLLFLTGQEEIDEACKR 368 + + ++CE E EG +L+FL G ++I + Sbjct: 382 RIRNSYDSRVLDKLRLPESEGCEDIDFIADLVYYICENEPEGAILVFLPGYDKISQLYNI 441 Query: 369 IKREVDDLGPEVGD-IKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETS 427 + + G D + + PL+S + +QQ +F PP A RKV++ST IAETS Sbjct: 442 LDKPKTSKGQRWRDHMAVFPLHSLMQSGEQQAVFRRPP------AGQRKVIISTIIAETS 495 Query: 428 LTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTE 487 +TID VV+VI+ G K Y+ ++SL ++KA+ QQR GRAGR RPG C+ L++ Sbjct: 496 VTIDDVVYVINSGRTKATNYDIETNIQSLDEVWVTKANTQQRRGRAGRVRPGICYNLFS- 554 Query: 488 KAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHF--DFMDPPAPETLMRALELLNY 545 +A + M D PEILRS L S++L LK L IDD F ++ P PE + +ELL Sbjct: 555 RAREDRMDDIPTPEILRSKLESIILSLKLLHIDDPYRFLQTLINAPNPEAIKMGVELLKR 614 Query: 546 LAALNDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITAMLSVPQCFVRPTE 605 + AL+ G LT LG +A+ P+DPQ+ KM++ S + C + + S A LS F P Sbjct: 615 IEALDQTGTLTPLGMHLAKLPIDPQMGKMILMSALFCCLDPITSAAAALSFKSPFYSPLG 674 Query: 606 AKKAADEAKMRFA-HIDGDHLTLLNVYHAFKQ---NHESVQWCYDNFINYRSLMSADNVR 661 + DE K R A ++ DHL + N A++ +H +CY NF++ +L + ++ Sbjct: 675 KESRVDEIKRRMARNMRSDHLMVHNTIIAYRDSRYSHAERDFCYKNFLSSMTLQQLERMK 734 Query: 662 QQLSRIMDRFNLPRRST--DFTSRDYYINI---RKALVTGYFMQVAHLE---------RT 707 Q S ++ + S D S I R + G + +AHL R Sbjct: 735 NQFSELLYNYKFLASSNCKDAASNKNSEKIPLLRAIIGAGLYPNMAHLRKSRQIKNRVRA 794 Query: 708 GHYLTVKDNQVVQLHPSTV 726 H + D + V HPS+V Sbjct: 795 IHTMATDDGRRVNFHPSSV 813 >5VHD-D nrPDB Length = 870 Score = 328 bits (842), Expect = 4e-90, Method: Compositional matrix adjust. Identities = 232/727 (31%), Positives = 367/727 (50%), Gaps = 104/727 (14%) Query: 126 RYYDILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVE-YMRSLPGP 184 RY ++ + R +LP + + +++ HQ V+ GETG GKTTQ+ Q+ ++ Y+ G Sbjct: 49 RYIEMQRFREKLPSYGMQKELVNMIDNHQVTVISGETGCGKTTQVTQFILDNYIERGKGS 108 Query: 185 KRGVACTQPRRVAAMSVAQRVADEM--DVMLGQEVGYSIRFEDCSSAK--TILKYMTDGM 240 + CTQPRR++A+SVA+RVA E G GY IR + K +IL Y T G+ Sbjct: 109 ACRIVCTQPRRISAISVAERVAAERAESCGNGNSTGYQIRLQSRLPRKQGSIL-YCTTGI 167 Query: 241 LLREAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKF 300 +L+ +DP L I+LDE HER L +D+LM V+K+++ R DLKV++MSATL+A KF Sbjct: 168 ILQWLQSDPHLSSVSHIVLDEIHERNLQSDVLMTVVKDLLSYRPDLKVVLMSATLNAEKF 227 Query: 301 QIYFDNCPLLTIPGRTHPV----------EIFYTPEP-------------------ERDY 331 YF NCP++ IPG T PV +I Y PE E+ Y Sbjct: 228 SEYFGNCPMIHIPGFTFPVVEYLLEDIIEKIRYVPEQKEHRSQFKKGFMQGHVNRQEKYY 287 Query: 332 LEAA------------------------------------IRTVIQIHMCEEEEGDLLLF 355 EA I +I+ + EEE+G +L+F Sbjct: 288 YEAIYKERWPGYLRELRQRYSASTVDVVEMMDDEKVDLNLIAALIRYIVLEEEDGAILVF 347 Query: 356 LTGQEEIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGR 415 L G + I + +V + IIPL+S +P Q ++F+ PP R Sbjct: 348 LPGWDNISTLHDLLMSQV---MFKSDKFIIIPLHSLMPTVNQTQVFKRTPPGV------R 398 Query: 416 KVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGR 475 K+V++TNIAETS+TID VV+VID G K+ ++ + + ++ +SKA+A+QR GRAGR Sbjct: 399 KIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGR 458 Query: 476 TRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHF--DFMDPPAP 533 +PG C+ LY + + D PEILR+ L + LQ+K L + + HF MDPP+ Sbjct: 459 VQPGHCYHLYNS-LRASLLDDYQLPEILRTPLEELCLQIKILRLGGIAHFLSRLMDPPSN 517 Query: 534 ETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITAM 593 E ++ +++ L L AL+ +LT LG +A P++P + KM++ + C + VL+I A Sbjct: 518 EAVLLSIKHLMELNALDKQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAAS 577 Query: 594 LSVPQCFVRPTEAKKAADEAKMRFAH-IDGDHLTLLNVYHAFKQNHE-----SVQWCYDN 647 LS FV P +K AD + A DHLT++N + +++ + +C++ Sbjct: 578 LSFKDPFVIPLGKEKVADARRKELAKDTKSDHLTVVNAFKGWEKAKQRGFRYEKDYCWEY 637 Query: 648 FINYRSLMSADNVRQQLSR--IMDRFNLPRRSTDFTSRDYYIN---IRKALVTGYFMQVA 702 F++ +L N++ Q + + F R D S N I+ + G + +VA Sbjct: 638 FLSSNTLQMLHNMKGQFAEHLLGAGFVSSRNPQDPESNINSDNEKIIKAVICAGLYPKVA 697 Query: 703 HL------ERTGHYLTVKDNQVVQLHPSTVLDHKPE----WVLYNEFVLTTKNYIRTCTD 752 + +R + K + VV +HP +V + E W++Y+ + T+ Y+ CT+ Sbjct: 698 KIRLNLGKKRKMVKVYTKTDGVVAIHPKSVNVEQTEFNYNWLIYHLKMRTSSIYLYDCTE 757 Query: 753 IKPEWLV 759 + P L+ Sbjct: 758 VSPYCLL 764 >6HEG-A nrPDB Length = 809 Score = 228 bits (582), Expect = 5e-60, Method: Compositional matrix adjust. Identities = 154/426 (36%), Positives = 232/426 (54%), Gaps = 24/426 (5%) Query: 156 FVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGVACTQPRRVAAMSVAQRVADEMDVMLGQ 215 +L TG+GK+T +P + + PG + +PRR+AA +VAQR+A+ ++ G Sbjct: 23 VLLSAPTGAGKSTWLPLQLLAH----PGINGKIILLEPRRLAARNVAQRLAELLNEKPGD 78 Query: 216 EVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLLERYGVIILDEAHERTLATDILMGV 275 VGY +R ++C T L+ +T+G+L R DP L G++ILDE HER+L D+ + + Sbjct: 79 TVGYRMRAQNCVGPNTRLEVVTEGVLTRMIQRDPELSGVGLVILDEFHERSLQADLALAL 138 Query: 276 LKEVVRQ-RSDLKVIVMSATLDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEPERDYLEA 334 L +V + R DLK+++MSATLD + Q P++ GR+ PVE Y P P + Sbjct: 139 LLDVQQGLRDDLKLLIMSATLDNDRLQQMLPEAPVVISEGRSFPVERRYLPLPAHQRFDD 198 Query: 335 AIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRIKREVDDLGPEVG-DIKIIPLYSTLP 393 A+ V M +E G LLLFL G E I+R + L +G D+ + PLY L Sbjct: 199 AV-AVATAEMLRQESGSLLLFLPGVGE-------IQRVQEQLASRIGSDVLLCPLYGALS 250 Query: 394 PQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRV 453 Q++ P P RKVV++TNIAETSLTI+G+ V+D + ++PR + Sbjct: 251 LNDQRKAILPAPQGM------RKVVLATNIAETSLTIEGIRLVVDCAQERVARFDPRTGL 304 Query: 454 ESLLVTAISKASAQQRAGRAGRTRPGKCFRLYT-EKAYKTEMQDNTYPEILRSNLGSVVL 512 L+ +S+AS QRAGRAGR PG L E+A + Q + PEIL+S+L +++ Sbjct: 305 TRLITQRVSQASMTQRAGRAGRLEPGISLHLIAKEQAERAAAQ--SEPEILQSDLSGLLM 362 Query: 513 QLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLA 572 +L + G D ++D P L+ A LL L AL + L+ G MA DP+LA Sbjct: 363 ELLQWGCSDPAQMSWLDQPPVVNLLAAKRLLQMLGALEGE-RLSAQGQKMAALGNDPRLA 421 Query: 573 KMVIAS 578 M++++ Sbjct: 422 AMLVSA 427 >3I4U-A nrPDB Length = 270 Score = 214 bits (545), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 109/234 (46%), Positives = 151/234 (64%), Gaps = 5/234 (2%) Query: 534 ETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITAM 593 ETL+ A+E L L AL+D+G LT LG MAEFPL+P L KM+I S CS E+L+I +M Sbjct: 18 ETLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSM 77 Query: 594 LSVPQCFVRPTEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQNHESVQWCYDNFINYRS 653 LSV F RP + + AD+ K +F +GDHLTLL VY+++K N S WCY+NFI RS Sbjct: 78 LSVQNVFYRPKDKQALADQKKAKFHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARS 137 Query: 654 LMSADNVRQQLSRIMDRFNLPRRSTDFTSRDYYINIRKALVTGYFMQVAHLERTGHYLTV 713 L A ++R+Q+ IMDR L S ++ + ++KA+ +G+F A + Y T+ Sbjct: 138 LRRAQDIRKQMLGIMDRHKLDVVSCGKST----VRVQKAICSGFFRNAAKKDPQEGYRTL 193 Query: 714 KDNQVVQLHPSTVL-DHKPEWVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPQYY 766 D QVV +HPS+ L + +PEWV+Y+E VLTTK Y+R T I P WLV+ AP ++ Sbjct: 194 IDQQVVYIHPSSALFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFF 247 >3LLM-A nrPDB Length = 235 Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 65/185 (35%), Positives = 115/185 (62%), Gaps = 4/185 (2%) Query: 130 ILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVE-YMRSLPGPKRGV 188 IL++R LPV +++ + + ++ ++ G TG GKTTQ+PQ+ ++ ++++ + + Sbjct: 53 ILQERELLPVKKFESEILEAISQNSVVIIRGATGCGKTTQVPQFILDDFIQNDRAAECNI 112 Query: 189 ACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDC-SSAKTILKYMTDGMLLREAMN 247 TQPRR++A+SVA+RVA E G+ GYS+RFE + + T G+LLR+ Sbjct: 113 VVTQPRRISAVSVAERVAFERGEEPGKSCGYSVRFESILPRPHASIMFCTVGVLLRKL-- 170 Query: 248 DPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNC 307 + + +I+DE HER + TD L+ VL++VV+ ++++++MSAT+D F YF NC Sbjct: 171 EAGIRGISHVIVDEIHERDINTDFLLVVLRDVVQAYPEVRIVLMSATIDTSMFCEYFFNC 230 Query: 308 PLLTI 312 P++ + Sbjct: 231 PIIEV 235 >5WSO-A nrPDB Length = 476 Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 105/418 (25%), Positives = 178/418 (42%), Gaps = 92/418 (22%) Query: 162 TGSGKTTQIPQWCVEYMRSLPGPKRGVACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSI 221 TG+GKTT++P+ +E + G + V P R AA SV Q + + + +++ Sbjct: 21 TGAGKTTELPKAVIEEI----GRHKRVLVLIPLRAAAESVYQYMR-----LKHPSISFNL 71 Query: 222 RFEDCSSA--KTILKYMTDGML-------LREAMNDPLLERYGVIILDEAHERTLATDIL 272 R D T + Y + G LR AM + Y I LDE H AT Sbjct: 72 RIGDMKEGDMATGITYASYGYFCQMPQPKLRAAMVE-----YSYIFLDEYH---CATPEQ 123 Query: 273 MGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEPER-DY 331 + ++ ++ R ++V+ M+AT AG +T G+ HP+E F PE + + Sbjct: 124 LAIIGKIHRFSESIRVVAMTAT-PAGS----------VTTTGQKHPIEEFIAPEVMKGED 172 Query: 332 LEAAIRTVIQIHM-CEEEEGDLLLFLTGQEEIDEACKRIKREVDDLGPEVGDIKIIPLYS 390 L + + + + +E +G++L+F+ + E K++K + + G YS Sbjct: 173 LGSQFLDIAGLKIPVDEMKGNMLVFVPTRNMAVEVAKKLKAKGYNSGY---------YYS 223 Query: 391 TLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPR 450 P + + P V+V+TN E+ +T+ + VID G +K R Sbjct: 224 GEDPANLRVVTSQSP----------YVIVATNAIESGVTLPDLDTVIDTGLKCEK----R 269 Query: 451 IRVES---LLVT-----AISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEI 502 +RV S +VT A++ QR GR GR +PG+ +R + T +D Y Sbjct: 270 VRVSSKIPFIVTGLKRMAVTVGEQAQRRGRVGRVKPGRYYR---SQETATGSKDYHYD-- 324 Query: 503 LRSNLGSVVLQLKKLGIDDLV---------HFDFMDPPAPETLMRALELLNYLAALND 551 +LQ ++ GI+D + ++D+ L+ LE+LN L D Sbjct: 325 --------LLQAQRYGIEDGINVTKSFREMNYDWSLYEEDSLLITQLEILNNLLISED 374 >4CBI-A nrPDB Length = 516 Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 90/342 (26%), Positives = 148/342 (43%), Gaps = 72/342 (21%) Query: 162 TGSGKTTQIPQWCVEYMRSLPGPKRGVACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSI 221 TG+GKTT++P+ +E + G + V P R AA SV Q + + + +++ Sbjct: 53 TGAGKTTELPRSVIEEI----GRHKRVLVLIPLRAAAESVYQYMRQKHP-----SIAFNL 103 Query: 222 RFEDCSSA--KTILKYMTDGMLLREAMNDPLLE----RYGVIILDEAHERTLATDILMGV 275 R + T + Y + G + M+ P L Y I LDE H AT + + Sbjct: 104 RIGEMKEGDMATGITYASYGYFCQ--MSQPKLRAAMVEYSFIFLDEYH---CATPEQLAI 158 Query: 276 LKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEPER------ 329 + ++ R +L+V+ M+AT AG +T G+ HP+E F PE + Sbjct: 159 MGKIHRFSENLRVVAMTAT-PAGT----------VTTTGQKHPIEEFIAPEVMKGEDLGS 207 Query: 330 DYLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRIKREVDDLGPEVGDIKIIPLY 389 +YL+ A + EE + ++L+F+ + EA K++K + + G Y Sbjct: 208 EYLDIAGLKI----PVEEMKNNMLVFVPTRNMAVEAAKKLKAKGYNSGY---------YY 254 Query: 390 STLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNP 449 S P + + P VVV+TN E+ +T+ + V+D G +K Sbjct: 255 SGEDPSNLRVVTSQSP----------YVVVATNAIESGVTLPDLDVVVDTGLKCEK---- 300 Query: 450 RIR--------VESLLVTAISKASAQQRAGRAGRTRPGKCFR 483 RIR V L A++ QR GR GR +PG+ +R Sbjct: 301 RIRLSPKMPFIVTGLKRMAVTIGEQAQRRGRVGRVKPGRYYR 342 >5WX1-A nrPDB Length = 733 Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 91/345 (26%), Positives = 150/345 (43%), Gaps = 78/345 (22%) Query: 162 TGSGKTTQIPQWCVEYMRSLPGPKRGVACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSI 221 TG+GKTT++P+ +E + G + V P R AA SV Q + + + +++ Sbjct: 278 TGAGKTTELPRSVIEEI----GRHKRVLVLIPLRAAAESVYQYMRQKH-----PSIAFNL 328 Query: 222 RFEDCSSA--KTILKYMTDGML-------LREAMNDPLLERYGVIILDEAHERTLATDIL 272 R + T + Y + G LR AM + Y I LDE H AT Sbjct: 329 RIGEMKEGDMATGITYASYGYFCQMPQPKLRAAMVE-----YSFIFLDEYH---CATPEQ 380 Query: 273 MGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEPER--- 329 + ++ ++ R +L+V+ M+AT AG +T G+ HP+E F PE + Sbjct: 381 LAIMGKIHRFSENLRVVAMTAT-PAGT----------VTTTGQKHPIEEFIAPEVMKGED 429 Query: 330 ---DYLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRIKREVDDLGPEVGDIKII 386 +YL+ A + EE + ++L+F+ + E K++K + + G Sbjct: 430 LGSEYLDIAGLKI----PVEEMKSNMLVFVPTRNMAVETAKKLKAKGYNSGY-------- 477 Query: 387 PLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKV 446 YS P + + P VVV+TN E+ +T+ + V+D G +K Sbjct: 478 -YYSGEDPSNLRVVTSQSP----------YVVVATNAIESGVTLPDLDVVVDTGLKCEK- 525 Query: 447 YNPRIRVES---LLVT-----AISKASAQQRAGRAGRTRPGKCFR 483 RIR+ S +VT A++ QR GR GR +PG+ +R Sbjct: 526 ---RIRLSSKMPFIVTGLKRMAVTIGEQAQRRGRVGRVKPGRYYR 567 >2JJ9-A nrPDB Length = 788 Score = 37.4 bits (85), Expect = 0.024, Method: Compositional matrix adjust. Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 9/78 (11%) Query: 114 CINPFTNLP-HTPRYYDILKKRLQLPVWEYKDRFTDILVR-------HQSFVLVGETGSG 165 +NPF +P +T DI K R + V + +D+ R +QS ++ GE+G+G Sbjct: 136 AVNPFKRIPIYTQEMVDIFKGRRRNEVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAG 195 Query: 166 KTTQIPQWCVEYMRSLPG 183 KT + ++Y+ S+ G Sbjct: 196 KTENTKK-VIQYLASVAG 212 >3MKD-A nrPDB Length = 692 Score = 37.4 bits (85), Expect = 0.024, Method: Compositional matrix adjust. Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 9/78 (11%) Query: 114 CINPFTNLP-HTPRYYDILKKRLQLPVWEYKDRFTDILVR-------HQSFVLVGETGSG 165 +NPF +P +T DI K R + V + +D+ R +QS ++ GE+G+G Sbjct: 124 AVNPFKRIPIYTQEMVDIFKGRRRNEVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAG 183 Query: 166 KTTQIPQWCVEYMRSLPG 183 KT + ++Y+ S+ G Sbjct: 184 KTENTKK-VIQYLASVAG 200 >2B0U-A nrPDB Length = 116 Score = 34.7 bits (78), Expect = 0.16, Method: Composition-based stats. Identities = 22/61 (36%), Positives = 30/61 (49%), Gaps = 4/61 (6%) Query: 80 SHSAHSTHSAHSTHSTHSAHSTHAGHAGHTSLPQCINPFTNLPHTPRYYD----ILKKRL 135 SH A ++ S+ S HST H GH+ +L C P P + YYD I+KK + Sbjct: 46 SHIAGTSGSSLSFHSTVINHYRMRGHSPFANLKSCCVPTKLRPMSMLYYDDGQNIIKKDI 105 Query: 136 Q 136 Q Sbjct: 106 Q 106 >2Z83-A nrPDB Length = 459 Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust. Identities = 66/300 (22%), Positives = 112/300 (37%), Gaps = 41/300 (13%) Query: 148 DILVRHQSFVLVGETGSGKTTQI-PQWCVEYMRSLPGPKRGVACTQPRRVAAMSVAQRVA 206 ++L + Q VL GSGKT +I PQ + A Q R A ++ + VA Sbjct: 16 NMLRKRQMTVLDLHPGSGKTRKILPQIIKD------------AIQQRLRTAVLAPTRVVA 63 Query: 207 DEMDVMLGQEVGYSIRFEDCS-----SAKTILKYMTDGMLLREAMNDPLLERYGVIILDE 261 EM L G +R++ + I+ M L M+ + Y + ++DE Sbjct: 64 AEMAEAL---RGLPVRYQTSAVQREHQGNEIVDVMCHATLTHRLMSPNRVPNYNLFVMDE 120 Query: 262 AHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCPLL----TIPGRTH 317 AH A+ G + V + + I M+AT N P+ IP R Sbjct: 121 AHFTDPASIAARGYIATKV-ELGEAAAIFMTATPPGTTDPFPDSNAPIHDLQDEIPDRAW 179 Query: 318 PVEIFYTPE--PERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEIDE--ACKR----- 368 + E + + A+++ +I MC + G ++ L + E CK Sbjct: 180 SSGYEWITEYAGKTVWFVASVKMGNEIAMCLQRAGKKVIQLNRKSYDTEYPKCKNGDWDF 239 Query: 369 -IKREVDDLGPEVGDIKIIPLYSTLPPQ-----QQQRIFEPPPPKKQNGAIGRKVVVSTN 422 I ++ ++G G ++I ++ P + + I P P A R+ V N Sbjct: 240 VITTDISEMGANFGASRVIDCRKSVKPTILEEGEGRVILGNPSPITSASAAQRRGRVGRN 299 >5OVO-B nrPDB Length = 99 Score = 34.3 bits (77), Expect = 0.24, Method: Composition-based stats. Identities = 25/74 (33%), Positives = 35/74 (47%), Gaps = 10/74 (13%) Query: 424 AETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISK------ASAQQRAGRAGRTR 477 A TSL I G+ GF +QK + P+++VE A+S A Q+A GR Sbjct: 19 ALTSLGIQGLTVSEVKGFGRQKGFLPKVKVE----VAVSDDQYEQVVEAIQKAANTGRIG 74 Query: 478 PGKCFRLYTEKAYK 491 GK F L +A + Sbjct: 75 DGKIFVLDIAQAVR 88 >2V8O-A nrPDB Length = 444 Score = 33.5 bits (75), Expect = 0.37, Method: Compositional matrix adjust. Identities = 78/339 (23%), Positives = 129/339 (38%), Gaps = 67/339 (19%) Query: 148 DILVRHQSFVLVGETGSGKTTQI-PQWCVEYMRSLPGPKRGVACTQPRRVAAMSVAQRVA 206 ++L + Q VL G+GKT +I PQ + ++ + A P RV A +A+ Sbjct: 7 EMLKKRQLTVLDLHPGAGKTRRILPQIIKDAIQK----RLRTAVLAPTRVVAAEMAE--- 59 Query: 207 DEMDVMLGQEVGY-SIRFEDCSSAKTILKYMTDGMLLREAMNDPLLERYGVIILDEAHER 265 + G V Y + + S I+ M L M+ + Y + ++DEAH Sbjct: 60 ----ALRGLPVRYLTPAVQREHSGNEIVDVMCHATLTHRLMSPLRVPNYNLFVMDEAHFT 115 Query: 266 TLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCPLLT---IPGRTHPVEIF 322 A+ G + V + + I M+AT P T P PV Sbjct: 116 DPASIAARGYIATRV-EAGEAAAIFMTAT-------------PPGTSDPFPDTNSPVHDV 161 Query: 323 YTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRIKREVDDLGPEVGD 382 + P+R + + G + F+ + +E + ++R Sbjct: 162 SSEIPDRAWSSG-------FEWITDYAGKTVWFVASVKMSNEIAQCLQR---------AG 205 Query: 383 IKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFA 442 ++I Q ++ ++ PK +NG V++T+I+E G VID Sbjct: 206 KRVI--------QLNRKSYDTEYPKCKNGDW--DFVITTDISEMGANF-GASRVID---- 250 Query: 443 KQKVYNPRI------RVESLLVTAISKASAQQRAGRAGR 475 +K P I RV + +AI+ ASA QR GR GR Sbjct: 251 CRKSVKPTILDEGEGRVILSVPSAITSASAAQRRGRVGR 289 >5HLY-A nrPDB Length = 383 Score = 32.3 bits (72), Expect = 0.82, Method: Compositional matrix adjust. Identities = 22/61 (36%), Positives = 30/61 (49%), Gaps = 4/61 (6%) Query: 80 SHSAHSTHSAHSTHSTHSAHSTHAGHAGHTSLPQCINPFTNLPHTPRYYD----ILKKRL 135 SH A ++ S+ S HST H GH+ +L C P P + YYD I+KK + Sbjct: 313 SHIAGTSGSSLSFHSTVINHYRMRGHSPFANLKSCCVPTKLRPMSMLYYDDGQNIIKKDI 372 Query: 136 Q 136 Q Sbjct: 373 Q 373 >4BYF-A nrPDB Length = 725 Score = 32.3 bits (72), Expect = 0.86, Method: Compositional matrix adjust. Identities = 22/93 (23%), Positives = 41/93 (44%), Gaps = 7/93 (7%) Query: 152 RHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGVAC------TQPRRVAAMSVAQRV 205 R Q+ ++ GE+G+GKT + Y + P P+RG A + P + A A+ + Sbjct: 97 RDQAVMISGESGAGKTEATKRLLQFYAETCPAPERGGAVRDRLLQSNP-VLEAFGNAKTL 155 Query: 206 ADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTD 238 ++ G+ + F+ IL Y+ + Sbjct: 156 RNDNSSRFGKYMDVQFDFKGAPVGGHILSYLLE 188 >2WV9-A nrPDB Length = 673 Score = 32.0 bits (71), Expect = 0.95, Method: Compositional matrix adjust. Identities = 77/336 (22%), Positives = 129/336 (38%), Gaps = 61/336 (18%) Query: 148 DILVRHQSFVLVGETGSGKTTQI-PQWCVEYMRSLPGPKRGVACTQPRRVAAMSVAQRVA 206 ++L + Q VL G+GKT +I PQ + ++ + A P RV A +A+ Sbjct: 236 EMLKKRQLTVLDLHPGAGKTRRILPQIIKDAIQK----RLRTAVLAPTRVVAAEMAE--- 288 Query: 207 DEMDVMLGQEVGY-SIRFEDCSSAKTILKYMTDGMLLREAMNDPLLERYGVIILDEAHER 265 + G V Y + + S I+ M L M+ + Y + ++DEAH Sbjct: 289 ----ALRGLPVRYLTPAVQREHSGNEIVDVMCHATLTHRLMSPLRVPNYNLFVMDEAHFT 344 Query: 266 TLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCPLLTIPGRTHPVEIFYTP 325 A+ G + V + + I M+AT + P P PV + Sbjct: 345 DPASIAARGYIATRV-EAGEAAAIFMTATPPG-------TSDPF---PDTNSPVHDVSSE 393 Query: 326 EPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRIKREVDDLGPEVGDIKI 385 P+R + + G + F+ + +E + ++R ++ Sbjct: 394 IPDRAWSSG-------FEWITDYAGKTVWFVASVKMSNEIAQCLQR---------AGKRV 437 Query: 386 IPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQK 445 I Q ++ ++ PK +NG V++T+I+E G VID +K Sbjct: 438 I--------QLNRKSYDTEYPKCKNGDW--DFVITTDISEMGANF-GASRVID----CRK 482 Query: 446 VYNPRI------RVESLLVTAISKASAQQRAGRAGR 475 P I RV + +AI+ ASA QR GR GR Sbjct: 483 SVKPTILDEGEGRVILSVPSAITSASAAQRRGRVGR 518 >1QON-A nrPDB Length = 585 Score = 32.0 bits (71), Expect = 0.99, Method: Compositional matrix adjust. Identities = 27/105 (25%), Positives = 45/105 (42%), Gaps = 12/105 (11%) Query: 371 REVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTI 430 R V G EV IP PP + R +P P + +G + + +T + E Sbjct: 17 RSVTVQGREVHVYTGIPY--AKPPVEDLRFRKPVPAEPWHGVLDATGLSATCVQER---- 70 Query: 431 DGVVFVIDPGFAKQKVYNPRIRV--ESLLVTAISKASAQQRAGRA 473 + PGF+ ++++NP V + L + + A A+ R GR Sbjct: 71 ----YEYFPGFSGEEIWNPNTNVSEDCLYINVWAPAKARLRHGRG 111 >2V9T-B nrPDB Length = 220 Score = 30.8 bits (68), Expect = 2.2, Method: Composition-based stats. Identities = 11/32 (34%), Positives = 17/32 (53%) Query: 172 QWCVEYMRSLPGPKRGVACTQPRRVAAMSVAQ 203 +W +Y+ + P G CT PRR+A + Q Sbjct: 171 KWLADYLHTNPIETSGARCTSPRRLANKRIGQ 202 >2QEQ-A nrPDB Length = 434 Score = 30.8 bits (68), Expect = 2.7, Method: Compositional matrix adjust. Identities = 78/345 (22%), Positives = 125/345 (36%), Gaps = 87/345 (25%) Query: 152 RHQSFVLVGETGSGKTTQI-PQWCVEYMRSLPGPKRGVACTQPRRVAAMSVAQRVADEMD 210 + Q VL G+GKT +I PQ E A + R A ++ + VA EM Sbjct: 1 KKQITVLDLHPGAGKTRRILPQIIKE------------AINRRLRTAVLAPTRVVAAEMA 48 Query: 211 VMLGQEVGYSIRFEDCSSAKT-----ILKYMTDGMLLREAMNDPLLERYGVIILDEAHER 265 L G IR++ + A+ I+ M L M+ + Y + ++DEAH Sbjct: 49 EAL---RGLPIRYQTSAVAREHNGNEIVDVMCHATLTHRLMSPHRVPNYNLFVMDEAHFT 105 Query: 266 TLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCPLLT---IPGRTHPVEIF 322 A+ G + V + + I M+AT P T P P+ Sbjct: 106 DPASIAARGYISTRV-ELGEAAAIFMTAT-------------PPGTSDPFPESNAPISDL 151 Query: 323 YTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRIKREVDDLGPEVGD 382 T P+R + E G + F+ + +E ++R Sbjct: 152 QTEIPDRAWNSG-------YEWITEYIGKTVWFVPSVKMGNEIALCLQR---------AG 195 Query: 383 IKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFA 442 K+I Q ++ +E PK +N VV+T+I+E + F Sbjct: 196 KKVI--------QLNRKSYETEYPKCKNDDW--DFVVTTDISE-----------MGANFK 234 Query: 443 KQKVYNPRIRVESLLVT------------AISKASAQQRAGRAGR 475 +V + R V+ ++T A++ ASA QR GR GR Sbjct: 235 ASRVIDSRKSVKPTIITEGEGRVILGEPSAVTAASAAQRRGRTGR 279 >2ZKI-A nrPDB Length = 199 Score = 30.4 bits (67), Expect = 2.9, Method: Compositional matrix adjust. Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 3/50 (6%) Query: 351 DLLLFLTGQEEIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRI 400 ++L+ G I E K I + ++ G EV KI + TLPP+ Q RI Sbjct: 6 NILVLFYGYGSIVELAKEIGKGAEEAGAEV---KIRRVRETLPPEFQSRI 52 >4Y68-C nrPDB Length = 312 Score = 30.0 bits (66), Expect = 3.7, Method: Compositional matrix adjust. Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 3/40 (7%) Query: 249 PLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKV 288 P ERYG +ILD +R L + G +++RQRS+ K+ Sbjct: 30 PSSERYGRVILDRVEQRGLYSQ---GRQWQIIRQRSEKKL 66 >2VVF-A nrPDB Length = 269 Score = 29.6 bits (65), Expect = 5.3, Method: Compositional matrix adjust. Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 7/79 (8%) Query: 217 VGYSIRFEDCSSAKT-ILKYMTDGM----LLREAMNDPLLERYGVIILDEAH--ERTLAT 269 VGY I +A +++ DG LL++A ND +LE+YG +LD + + L Sbjct: 168 VGYRIAAIHIKAAGVDAVEFQIDGTKWRDLLKKADNDYILEQYGKAVLDNTYTIDFMLEG 227 Query: 270 DILMGVLKEVVRQRSDLKV 288 D+ VL + + Q LK+ Sbjct: 228 DVYQSVLLDQMIQDLRLKI 246 >3SYK-A nrPDB Length = 309 Score = 29.3 bits (64), Expect = 7.5, Method: Compositional matrix adjust. Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 2/37 (5%) Query: 322 FYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTG 358 Y P+ ERDY + AI ++Q+ E DL++ L G Sbjct: 142 LYRPDNERDYGQEAIEILLQV--MENNRDDLVVILAG 176 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 6ID1-V nrPDB 1344 0.0 5XDR-A nrPDB 1120 0.0 5I8Q-A nrPDB 980 0.0 5D0U-A nrPDB 970 0.0 6I3O-A nrPDB 910 0.0 6FA9-A nrPDB 849 0.0 5GM6-Y nrPDB 806 0.0 5VHD-D nrPDB 744 0.0 5N8S-A nrPDB 692 0.0 6HEG-A nrPDB 447 e-126 3I4U-A nrPDB 346 3e-95 5WX1-A nrPDB 337 8e-93 4CBI-A nrPDB 337 1e-92 5WSO-A nrPDB 337 1e-92 3LLM-A nrPDB 240 2e-63 Sequences not found previously or not previously below threshold: 2P6R-A nrPDB 72 1e-12 2WV9-A nrPDB 68 1e-11 2V8O-A nrPDB 68 2e-11 2Z83-A nrPDB 67 4e-11 2V6J-A nrPDB 65 1e-10 5K8T-A nrPDB 65 1e-10 2QEQ-A nrPDB 64 2e-10 1HV8-A nrPDB 64 3e-10 6C90-A nrPDB 62 9e-10 4KBG-A nrPDB 62 1e-09 2BMF-A nrPDB 62 1e-09 2ZJO-A nrPDB 61 1e-09 2WZQ-A nrPDB 58 1e-08 4OK6-A nrPDB 57 3e-08 4B6E-A nrPDB 57 3e-08 2JLW-A nrPDB 56 6e-08 2DB3-A nrPDB 55 1e-07 1OYY-A nrPDB 55 2e-07 1YKS-A nrPDB 51 3e-06 3FHO-A nrPDB 49 8e-06 5WDX-A nrPDB 49 8e-06 5IVL-B nrPDB 49 9e-06 3EIQ-A nrPDB 48 1e-05 4NHO-A nrPDB 47 2e-05 5AGA-A nrPDB 47 2e-05 2VA8-A nrPDB 47 3e-05 2WWY-A nrPDB 47 3e-05 1GM5-A nrPDB 47 4e-05 5V9X-A nrPDB 46 5e-05 6B4I-E nrPDB 46 8e-05 5ZWN-y nrPDB 45 1e-04 6CRM-A nrPDB 45 1e-04 6CZ5-A nrPDB 44 2e-04 3PEW-A nrPDB 44 2e-04 3FE2-A nrPDB 44 2e-04 4CDG-A nrPDB 44 2e-04 3IUY-A nrPDB 44 3e-04 2I4I-A nrPDB 43 4e-04 2GXQ-A nrPDB 43 6e-04 4W7S-A nrPDB 42 9e-04 3JCR-F nrPDB 42 0.001 2PL3-A nrPDB 42 0.001 3MKD-A nrPDB 41 0.002 2JJ9-A nrPDB 41 0.002 3DKP-A nrPDB 40 0.004 4B3F-X nrPDB 40 0.005 5GJU-A nrPDB 40 0.005 3JAX-A nrPDB 39 0.006 1BR4-A nrPDB 39 0.006 4D25-A nrPDB 39 0.006 2ZJ8-A nrPDB 39 0.006 5LBA-B nrPDB 39 0.009 5LB8-A nrPDB 39 0.009 5ZBZ-A nrPDB 38 0.014 1WP9-A nrPDB 38 0.018 2Z0M-A nrPDB 38 0.021 5L3S-B nrPDB 37 0.027 5I4E-A nrPDB 37 0.041 1Q0U-A nrPDB 37 0.043 3BER-A nrPDB 37 0.045 3FTQ-A nrPDB 36 0.052 5WRJ-A nrPDB 36 0.059 6DUE-A nrPDB 36 0.080 6FEC-u nrPDB 35 0.086 5W1A-A nrPDB 35 0.087 2QAG-A nrPDB 35 0.091 4BYF-A nrPDB 35 0.099 5H53-A nrPDB 35 0.13 6BNQ-I nrPDB 35 0.14 2X51-A nrPDB 35 0.14 2MYS-A nrPDB 35 0.16 5YZG-3 nrPDB 34 0.21 6D00-1 nrPDB 34 0.24 2PX0-A nrPDB 34 0.27 5V7X-A nrPDB 34 0.31 4ON9-A nrPDB 34 0.31 6IC4-I nrPDB 34 0.33 6EM8-A nrPDB 34 0.37 4BPB-A nrPDB 34 0.39 3DM5-A nrPDB 33 0.42 5OVO-B nrPDB 33 0.53 3I5H-A nrPDB 33 0.54 1VPK-A nrPDB 33 0.59 4CIU-A nrPDB 33 0.63 6EMW-B nrPDB 32 0.75 2B0U-A nrPDB 32 0.91 5HLY-A nrPDB 32 0.98 3RC8-A nrPDB 32 0.99 4NL8-A nrPDB 32 1.4 6DCR-A nrPDB 32 1.4 2OUK-A nrPDB 32 1.5 2GZA-A nrPDB 31 1.7 6QUZ-B nrPDB 31 1.8 4Q7L-A nrPDB 31 1.8 4A2W-A nrPDB 31 1.9 4A2Q-A nrPDB 31 1.9 3CRV-A nrPDB 31 2.2 4A7F-C nrPDB 31 2.3 1ZU4-A nrPDB 31 2.6 1C4O-A nrPDB 30 3.0 5L3S-A nrPDB 30 3.3 1QZX-A nrPDB 30 3.3 2EYU-A nrPDB 30 3.6 2EWW-A nrPDB 30 4.0 5V7Q-T nrPDB 29 7.1 1NLZ-A nrPDB 29 8.6 >6ID1-V nrPDB Length = 795 Score = 1344 bits (3478), Expect = 0.0, Method: Composition-based stats. Identities = 795/795 (100%), Positives = 795/795 (100%) Query: 1 MSKRHRLDLGEDYPSGKKRAGTDGKDRDRDRDREDRSKDRDRERDRGDREREREKEKEKE 60 MSKRHRLDLGEDYPSGKKRAGTDGKDRDRDRDREDRSKDRDRERDRGDREREREKEKEKE Sbjct: 1 MSKRHRLDLGEDYPSGKKRAGTDGKDRDRDRDREDRSKDRDRERDRGDREREREKEKEKE 60 Query: 61 LRASTNAMLISAGLPPLKASHSAHSTHSAHSTHSTHSAHSTHAGHAGHTSLPQCINPFTN 120 LRASTNAMLISAGLPPLKASHSAHSTHSAHSTHSTHSAHSTHAGHAGHTSLPQCINPFTN Sbjct: 61 LRASTNAMLISAGLPPLKASHSAHSTHSAHSTHSTHSAHSTHAGHAGHTSLPQCINPFTN 120 Query: 121 LPHTPRYYDILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRS 180 LPHTPRYYDILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRS Sbjct: 121 LPHTPRYYDILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRS 180 Query: 181 LPGPKRGVACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGM 240 LPGPKRGVACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGM Sbjct: 181 LPGPKRGVACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGM 240 Query: 241 LLREAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKF 300 LLREAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKF Sbjct: 241 LLREAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKF 300 Query: 301 QIYFDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQE 360 QIYFDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQE Sbjct: 301 QIYFDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQE 360 Query: 361 EIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVS 420 EIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVS Sbjct: 361 EIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVS 420 Query: 421 TNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGK 480 TNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGK Sbjct: 421 TNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGK 480 Query: 481 CFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRAL 540 CFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRAL Sbjct: 481 CFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRAL 540 Query: 541 ELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITAMLSVPQCF 600 ELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITAMLSVPQCF Sbjct: 541 ELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITAMLSVPQCF 600 Query: 601 VRPTEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQNHESVQWCYDNFINYRSLMSADNV 660 VRPTEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQNHESVQWCYDNFINYRSLMSADNV Sbjct: 601 VRPTEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQNHESVQWCYDNFINYRSLMSADNV 660 Query: 661 RQQLSRIMDRFNLPRRSTDFTSRDYYINIRKALVTGYFMQVAHLERTGHYLTVKDNQVVQ 720 RQQLSRIMDRFNLPRRSTDFTSRDYYINIRKALVTGYFMQVAHLERTGHYLTVKDNQVVQ Sbjct: 661 RQQLSRIMDRFNLPRRSTDFTSRDYYINIRKALVTGYFMQVAHLERTGHYLTVKDNQVVQ 720 Query: 721 LHPSTVLDHKPEWVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPQYYDMSNFPQCEAKRQL 780 LHPSTVLDHKPEWVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPQYYDMSNFPQCEAKRQL Sbjct: 721 LHPSTVLDHKPEWVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPQYYDMSNFPQCEAKRQL 780 Query: 781 DRIIAKLQSKEYSQY 795 DRIIAKLQSKEYSQY Sbjct: 781 DRIIAKLQSKEYSQY 795 >5XDR-A nrPDB Length = 690 Score = 1120 bits (2897), Expect = 0.0, Method: Composition-based stats. Identities = 685/686 (99%), Positives = 686/686 (100%) Query: 110 SLPQCINPFTNLPHTPRYYDILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQ 169 SLPQCINPFTNLPHTPRYYDILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQ Sbjct: 5 SLPQCINPFTNLPHTPRYYDILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQ 64 Query: 170 IPQWCVEYMRSLPGPKRGVACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSA 229 IPQWCVEYMRSLPGPKRGVACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSA Sbjct: 65 IPQWCVEYMRSLPGPKRGVACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSA 124 Query: 230 KTILKYMTDGMLLREAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVI 289 KTILKYMTDGMLLREAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVI Sbjct: 125 KTILKYMTDGMLLREAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVI 184 Query: 290 VMSATLDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEE 349 VMSATLDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEE Sbjct: 185 VMSATLDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEE 244 Query: 350 GDLLLFLTGQEEIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQ 409 GDLLLFLTGQEEIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQ Sbjct: 245 GDLLLFLTGQEEIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQ 304 Query: 410 NGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQR 469 NGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQR Sbjct: 305 NGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQR 364 Query: 470 AGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMD 529 AGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMD Sbjct: 365 AGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMD 424 Query: 530 PPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLS 589 PPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLS Sbjct: 425 PPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLS 484 Query: 590 ITAMLSVPQCFVRPTEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQNHESVQWCYDNFI 649 ITAMLSVPQCFVRPTEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQNHESVQWCYDNFI Sbjct: 485 ITAMLSVPQCFVRPTEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQNHESVQWCYDNFI 544 Query: 650 NYRSLMSADNVRQQLSRIMDRFNLPRRSTDFTSRDYYINIRKALVTGYFMQVAHLERTGH 709 NYRSLMSADNVRQQLSRIMDRFNLPRRS+DFTSRDYYINIRKALVTGYFMQVAHLERTGH Sbjct: 545 NYRSLMSADNVRQQLSRIMDRFNLPRRSSDFTSRDYYINIRKALVTGYFMQVAHLERTGH 604 Query: 710 YLTVKDNQVVQLHPSTVLDHKPEWVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPQYYDMS 769 YLTVKDNQVVQLHPSTVLDHKPEWVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPQYYDMS Sbjct: 605 YLTVKDNQVVQLHPSTVLDHKPEWVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPQYYDMS 664 Query: 770 NFPQCEAKRQLDRIIAKLQSKEYSQY 795 NFPQCEAKRQLDRIIAKLQSKEYSQY Sbjct: 665 NFPQCEAKRQLDRIIAKLQSKEYSQY 690 >5I8Q-A nrPDB Length = 767 Score = 980 bits (2533), Expect = 0.0, Method: Composition-based stats. Identities = 446/683 (65%), Positives = 541/683 (79%), Gaps = 12/683 (1%) Query: 115 INPFTNLPHTPRYYDILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWC 174 INPFT TP+Y DILK R +LPV +D F + +Q V VGETGSGKTTQIPQ+ Sbjct: 71 INPFTGREFTPKYVDILKIRRELPVHAQRDEFLKLYQNNQIMVFVGETGSGKTTQIPQFV 130 Query: 175 V-EYMRSLPGPKRGVACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTIL 233 + + M L VACTQPRRVAAMSVAQRVA+EMDV LG+EVGYSIRFE+ +S KTIL Sbjct: 131 LFDEMPHLENT--QVACTQPRRVAAMSVAQRVAEEMDVKLGEEVGYSIRFENKTSNKTIL 188 Query: 234 KYMTDGMLLREAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSA 293 KYMTDGMLLREAM D L RY IILDEAHERTLATDILMG+LK+VV++R DLK+I+MSA Sbjct: 189 KYMTDGMLLREAMEDHDLSRYSCIILDEAHERTLATDILMGLLKQVVKRRPDLKIIIMSA 248 Query: 294 TLDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLL 353 TLDA KFQ YF++ PLL +PGRT+PVE++YTPE +RDYL++AIRTV+QIH EE GD+L Sbjct: 249 TLDAEKFQRYFNDAPLLAVPGRTYPVELYYTPEFQRDYLDSAIRTVLQIH-ATEEAGDIL 307 Query: 354 LFLTGQEEIDEACKRIKREVDDLGPE--VGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNG 411 LFLTG++EI++A ++I E D L E G + + PLY +LPP QQQRIFEP P NG Sbjct: 308 LFLTGEDEIEDAVRKISLEGDQLVREEGCGPLSVYPLYGSLPPHQQQRIFEPAPE-SHNG 366 Query: 412 AIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAG 471 GRKVV+STNIAETSLTIDG+V+V+DPGF+KQKVYNPRIRVESLLV+ ISKASAQQRAG Sbjct: 367 RPGRKVVISTNIAETSLTIDGIVYVVDPGFSKQKVYNPRIRVESLLVSPISKASAQQRAG 426 Query: 472 RAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPP 531 RAGRTRPGKCFRLYTE+A++ E+ + +YPEILRSNL S VL+LKKLGIDDLVHFDFMDPP Sbjct: 427 RAGRTRPGKCFRLYTEEAFQKELIEQSYPEILRSNLSSTVLELKKLGIDDLVHFDFMDPP 486 Query: 532 APETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSIT 591 APET+MRALE LNYLA L+D+G+LT LG + ++FPLDP LA M+I S ++ CS E+L+I Sbjct: 487 APETMMRALEELNYLACLDDEGNLTPLGRLASQFPLDPMLAVMLIGSFEFQCSQEILTIV 546 Query: 592 AMLSVPQCFVRPTEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQNHESV----QWCYDN 647 AMLSVP F+RPT+ KK AD+AK FAH DGDH+TLLNVYHAFK + +WC D+ Sbjct: 547 AMLSVPNVFIRPTKDKKRADDAKNIFAHPDGDHITLLNVYHAFKSDEAYEYGIHKWCRDH 606 Query: 648 FINYRSLMSADNVRQQLSRIMDRFNLPRRSTDFTSRDYYINIRKALVTGYFMQVAHLER- 706 ++NYRSL +ADN+R QL R+M+R+NL +TD+ S Y+ NIRKAL +G+FMQVA Sbjct: 607 YLNYRSLSAADNIRSQLERLMNRYNLELNTTDYESPKYFDNIRKALASGFFMQVAKKRSG 666 Query: 707 TGHYLTVKDNQVVQLHPSTVLDHKPEWVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPQYY 766 Y+TVKDNQ V +HPSTVL H EWV+YNEFVLT+KNYIRT T ++PEWL++IAP YY Sbjct: 667 AKGYITVKDNQDVLIHPSTVLGHDAEWVIYNEFVLTSKNYIRTVTSVRPEWLIEIAPAYY 726 Query: 767 DMSNFPQCEAKRQLDRIIAKLQS 789 D+SNF + + K L+RI K+ Sbjct: 727 DLSNFQKGDVKLSLERIKEKVDR 749 >5D0U-A nrPDB Length = 714 Score = 970 bits (2508), Expect = 0.0, Method: Composition-based stats. Identities = 436/686 (63%), Positives = 540/686 (78%), Gaps = 11/686 (1%) Query: 115 INPFTNLPHTPRYYDILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWC 174 INP+T H+ RY+ ILK R +LPV + + F D+ +Q V VGETGSGKTTQIPQ+ Sbjct: 16 INPWTGQRHSERYFKILKARRKLPVNKQRQEFLDLYHNNQILVFVGETGSGKTTQIPQYV 75 Query: 175 VEYMRSLPGPKRGVACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILK 234 + Y + +ACTQPRRVAAMSVAQRVADE+DV LG+EVGYSIRFE+ +S+KT+LK Sbjct: 76 L-YDELPHQTGKLIACTQPRRVAAMSVAQRVADELDVKLGEEVGYSIRFENKTSSKTLLK 134 Query: 235 YMTDGMLLREAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSAT 294 YMTDG LLREAM+D + RY IILDEAHERTLATDILM +LK++ +R DLK+IVMSAT Sbjct: 135 YMTDGQLLREAMHDRDMSRYSCIILDEAHERTLATDILMALLKQLSERRKDLKIIVMSAT 194 Query: 295 LDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLL 354 LDA KFQ YF N PLL +PGRTHPVEIFYTPE ERDY+EAAIRTV+QIH CE E GD+LL Sbjct: 195 LDAQKFQSYFFNAPLLAVPGRTHPVEIFYTPEAERDYVEAAIRTVLQIHACEPE-GDILL 253 Query: 355 FLTGQEEIDEACKRIKREVDDLGPEV--GDIKIIPLYSTLPPQQQQRIFEPPP-PKKQNG 411 FLTG+EEI++AC+RI EVD++ E G + + PLY TLPP QQQRIFE P P + G Sbjct: 254 FLTGEEEIEDACRRISLEVDEMIRESDAGPMSVYPLYGTLPPHQQQRIFEKAPQPFRPGG 313 Query: 412 AIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAG 471 GRK +V+TNIAETSLTIDG+V+V+DPGF+KQK+YNPR RVESLLV+ ISKASAQQRAG Sbjct: 314 RPGRKCIVATNIAETSLTIDGIVYVVDPGFSKQKIYNPRTRVESLLVSPISKASAQQRAG 373 Query: 472 RAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPP 531 RAGRTRPGKCFRLYTE+A+K E+ + TYPEILRSNL + VL+LKKLG++DLVHFD MDPP Sbjct: 374 RAGRTRPGKCFRLYTEEAFKKELIEQTYPEILRSNLSNTVLELKKLGVEDLVHFDLMDPP 433 Query: 532 APETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSIT 591 APET+MRALE LNYLA L+DDG+LT LG++ +EFPLDP LA M+I+S ++ CSNE+LSIT Sbjct: 434 APETMMRALEELNYLACLDDDGELTPLGNLASEFPLDPALAVMLISSPEFYCSNEILSIT 493 Query: 592 AMLSVPQCFVRPTEAKKAADEAKMRFAHIDGDHLTLLNVYHAFK----QNHESVQWCYDN 647 ++LSVPQ +VRP A+K ADE K +FAH DGDHLTLLN YHA+K + + +WC+++ Sbjct: 494 SLLSVPQIWVRPANARKRADEMKAQFAHPDGDHLTLLNAYHAYKGAEARGEDMKKWCHEH 553 Query: 648 FINYRSLMSADNVRQQLSRIMDRFNLPRRSTDFTSRDYYINIRKALVTGYFMQVAHLERT 707 F++YR L SADNVR QL +IM+ + ST F ++YY NIR+AL+ G+FMQVA E + Sbjct: 554 FLSYRHLSSADNVRAQLKKIMETHGIELVSTPFHDKNYYTNIRRALLAGFFMQVAMRESS 613 Query: 708 GH--YLTVKDNQVVQLHPSTVLDHKPEWVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPQY 765 Y TVKD Q+V +HPST + EWV+YNEFVLTTK Y+RT T+I+PEWL++IAP Y Sbjct: 614 NSKVYKTVKDEQLVLIHPSTTVTTPYEWVVYNEFVLTTKQYVRTVTNIRPEWLLEIAPVY 673 Query: 766 YDMSNFPQCEAKRQLDRIIAKLQSKE 791 YD+S F + E K L R+ K++ ++ Sbjct: 674 YDLSTFQKGEIKNALTRVAEKIRRQQ 699 >6I3O-A nrPDB Length = 677 Score = 910 bits (2352), Expect = 0.0, Method: Composition-based stats. Identities = 339/657 (51%), Positives = 463/657 (70%), Gaps = 15/657 (2%) Query: 128 YDILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRG 187 I ++R LPV++++D+ + +Q ++VGETGSGKTTQ+ Q+ E + G Sbjct: 3 MSIKEQRESLPVFQFRDQIIQAVKDNQILIVVGETGSGKTTQVTQYLAEAGFTKYG---M 59 Query: 188 VACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMN 247 + CTQPRRVAA+SVA+RVA+E+ LGQEVGY+IRFED +S T +KYMTDGML RE + Sbjct: 60 IGCTQPRRVAAVSVAKRVAEEVGCQLGQEVGYTIRFEDVTSPATKIKYMTDGMLQREILM 119 Query: 248 DPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNC 307 DP L+RY VI+LDEAHERT+ATD+L +LK+ V++R DLKVIV SATLDA KF YF++C Sbjct: 120 DPDLKRYSVIMLDEAHERTIATDVLFALLKKTVKRRPDLKVIVTSATLDAEKFSEYFNSC 179 Query: 308 PLLTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACK 367 P+ TIPGRT PVEI Y+ EPE DYLEAA+ TV+QIH+ E GD+L+FLTGQEEID AC+ Sbjct: 180 PIFTIPGRTFPVEILYSREPEPDYLEAALTTVMQIHLTEPP-GDILVFLTGQEEIDTACE 238 Query: 368 RIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETS 427 + + LGP V ++ I+P+YS LP + Q RIFEP PP RKVV++TNIAETS Sbjct: 239 ILYERMKALGPSVPELIILPIYSALPSEMQSRIFEPAPPG------SRKVVIATNIAETS 292 Query: 428 LTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTE 487 +TID + +V+DPGF KQ Y+P++ ++SL+VT IS+A A QRAGRAGRT PGKCFRLYTE Sbjct: 293 ITIDYIYYVVDPGFVKQNAYDPKLGMDSLVVTPISQAQANQRAGRAGRTGPGKCFRLYTE 352 Query: 488 KAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLA 547 AY++EM T P+I R NL + +L LK +GI+DL+ FDFMDPP T++ ALE L L Sbjct: 353 AAYQSEMLPTTIPDIQRQNLANTILLLKAMGINDLLRFDFMDPPPVNTMLTALEELYALG 412 Query: 548 ALNDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITAMLSVPQCFVRPTEAK 607 AL+D+G LT LG MA+FP++P L+K++IAS D CS+E+++I +ML++ Q F RP + + Sbjct: 413 ALDDEGLLTRLGRKMADFPMEPSLSKVLIASVDKGCSDEMVTIVSMLNLQQIFYRPKDKQ 472 Query: 608 KAADEAKMRFAHIDGDHLTLLNVYHAFKQNHESVQWCYDNFINYRSLMSADNVRQQLSRI 667 + AD+ K +F GDHLTLLNVY+A+K + S WC++N+I R++ A +VRQQ+ +I Sbjct: 473 QQADQKKAKFHDPTGDHLTLLNVYNAWKNSGYSNAWCFENYIQARAMRRARDVRQQIVKI 532 Query: 668 MDRFNLPRRSTDFTSRDYYINIRKALVTGYFMQVAHLERTGHYLTVKDNQVVQLHPSTVL 727 M+R P S + IR+AL G+F A + Y T+ + V LHPS+ L Sbjct: 533 MERHRHPIISCGRDT----DKIRQALCAGFFRNTARKDPQEGYKTLTEGTPVYLHPSSAL 588 Query: 728 DHK-PEWVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPQYYDMSNFPQCEAKRQLDRI 783 K EWVLY+E VLTTK Y+ T I+P+WLV+ AP ++ ++ + +++ +RI Sbjct: 589 FGKQAEWVLYHELVLTTKEYMHFTTAIEPKWLVEAAPTFFKLAPTDRLSKRKKAERI 645 >6FA9-A nrPDB Length = 655 Score = 849 bits (2193), Expect = 0.0, Method: Composition-based stats. Identities = 325/641 (50%), Positives = 430/641 (67%), Gaps = 18/641 (2%) Query: 129 DILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGV 188 I + R LPV+ Y+D F D + +Q +LVGETGSGKTTQIPQ+ E + R + Sbjct: 23 TIQEVRKSLPVYAYRDAFLDAVKEYQVLILVGETGSGKTTQIPQYLHEAGYTK--GNRKI 80 Query: 189 ACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMND 248 ACTQPRRVAAMSVA RVADEM V LG EVGYSIRFEDC+S KTILKYMTDGMLLRE + Sbjct: 81 ACTQPRRVAAMSVAARVADEMGVRLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREMVTS 140 Query: 249 PLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCP 308 P L Y I++DEAHERT+ TDIL+ ++K++ R R +L++I+ SATL+A KF YFD+ P Sbjct: 141 PDLADYSCIMIDEAHERTVHTDILLALIKDLTRARPELRLIISSATLNAEKFSAYFDDAP 200 Query: 309 LLTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKR 368 + +PGR HPVE++YT PE +YLEAA+ TV QIH + EGD+L+FLTGQEEI+ AC+R Sbjct: 201 IFNVPGRVHPVEVYYTSAPESNYLEAALVTVFQIH-ATQPEGDILVFLTGQEEIERACER 259 Query: 369 IKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSL 428 ++ LG V +I +P+YS +P + Q +IFEP PP RKVV STNIAETSL Sbjct: 260 VEEIRRKLGKRVPEIIALPIYSNMPSEMQAKIFEPTPPG------ARKVVFSTNIAETSL 313 Query: 429 TIDGVVFVIDPGFAKQKVYNP--RIRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYT 486 TIDG+V+VID G+ K+ ++P +L V S+A+A QR GRAGR +PGKCFRLYT Sbjct: 314 TIDGIVYVIDSGYVKENTFSPVGTTGQSTLAVVPCSRAAANQRMGRAGRVKPGKCFRLYT 373 Query: 487 EKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYL 546 + AY +EM ++ PEI R++L SVVLQLK LGIDDL+ FDF+DPP E L+++L +L L Sbjct: 374 KYAYLSEMDESPTPEIQRTSLSSVVLQLKALGIDDLLGFDFLDPPPTELLIKSLNMLYAL 433 Query: 547 AALNDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITAML-SVPQCFVRPTE 605 ALN G LT +G M EFP +P LAK +IA+ C +EVL+I +ML V F RP + Sbjct: 434 GALNSAGQLTRVGRQMGEFPTEPMLAKALIAATQEGCVSEVLTIVSMLGEVGTLFFRPKD 493 Query: 606 AKKAADEAKMRFAHID-GDHLTLLNVYHAFKQNHESVQWCYDNFINYRSLMSADNVRQQL 664 K AD A+ RF D GDHLTLLN+Y+ + + S W +NF+ RSL A +VR QL Sbjct: 494 KKVHADSARARFTVRDGGDHLTLLNIYNQWVEAEYSPIWARENFLAQRSLTRARDVRDQL 553 Query: 665 SRIMDRFNLPRRSTDFTSRDYYINIRKALVTGYFMQVAHLERTG-HYLTVKDNQVVQLHP 723 +++ DR L + I +AL +F+ A L R G Y T+K+N V +HP Sbjct: 554 AKLCDRI-LDGSEASCGGVNNPTPILRALTAAFFLNAARLNRAGDGYRTLKNNITVYVHP 612 Query: 724 STV---LDHKPEWVLYNEFVLTTKNYIRTCTDIKPEWLVKI 761 S+V +D P+ ++Y+E V+T+K Y+R+ ++P WL + Sbjct: 613 SSVVRGMDPPPKVIIYHELVVTSKEYVRSVIPVEPRWLSEF 653 >5GM6-Y nrPDB Length = 876 Score = 806 bits (2082), Expect = 0.0, Method: Composition-based stats. Identities = 286/665 (43%), Positives = 414/665 (62%), Gaps = 35/665 (5%) Query: 126 RYYDILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPK 185 R I + R LPV +YKD + ++Q +++GETGSGKTTQ+PQ+ VE + G K Sbjct: 212 RILTIQEARKLLPVHQYKDELLQEIKKNQVLIIMGETGSGKTTQLPQYLVEDGFTDQG-K 270 Query: 186 RGVACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSA-KTILKYMTDGMLLRE 244 +A TQPRRVAA SVA RVADEM+V+LG+EVGY IRFED ++ KT+LKYMTDGMLLRE Sbjct: 271 LQIAITQPRRVAATSVAARVADEMNVVLGKEVGYQIRFEDKTTPNKTVLKYMTDGMLLRE 330 Query: 245 AMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYF 304 + D L +Y I++DEAHERTLATDIL+G+LK+++ QR LK+++ SAT++A KF +F Sbjct: 331 FLTDSKLSKYSCIMIDEAHERTLATDILIGLLKDILPQRPTLKLLISSATMNAKKFSEFF 390 Query: 305 DNCPLLTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEIDE 364 DNCP+ +PGR +PV+I YT +PE +Y+ AAI T+ QIH + GD+L+FLTGQEEI+ Sbjct: 391 DNCPIFNVPGRRYPVDIHYTLQPEANYIHAAITTIFQIHTTQSLPGDILVFLTGQEEIER 450 Query: 365 ACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIA 424 +++ + LG + I P+Y+ LP +QQ +IF+P P RKVV++TNIA Sbjct: 451 TKTKLEEIMSKLGSRTKQMIITPIYANLPQEQQLKIFQPTPEN------CRKVVLATNIA 504 Query: 425 ETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCFRL 484 ETSLTIDG+ +VIDPGF K+ Y P + LL S+AS QRAGRAGR PGKCFR+ Sbjct: 505 ETSLTIDGIRYVIDPGFVKENSYVPSTGMTQLLTVPCSRASVDQRAGRAGRVGPGKCFRI 564 Query: 485 YTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLN 544 +T+ +Y E++ PEI R+NL + VL L LG+ DL+ F MD P+ TL ++LE L Sbjct: 565 FTKWSYLHELELMPKPEITRTNLSNTVLLLLSLGVTDLIKFPLMDKPSIPTLRKSLENLY 624 Query: 545 YLAALNDDGDLTELGSMMAEFPLDPQLAKMV-IASCDYNCS---NEVLSITAML-SVPQC 599 L ALN G +T LG MM EFP +P+ AK++ A+ C E L+I +ML P Sbjct: 625 ILGALNSKGTITRLGKMMCEFPCEPEFAKVLYTAATHEQCQGVLEECLTIVSMLHETPSL 684 Query: 600 FVRPTEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQNHESVQWCYDNFINYRSLMSADN 659 F+ + D A + ++ DH+ L +++ ++ + S WC D+ I +++++ N Sbjct: 685 FI-----GQKRDAAASVLSEVESDHILYLEIFNQWRNSKFSRSWCQDHKIQFKTMLRVRN 739 Query: 660 VRQQLSRIMDRFNLPRRS----TDFTSRDYYINIR--KALVTGYFMQVAHLERTGHYLTV 713 +R QL R ++ L ++ + YIN R + ++G+ M + L TG+ Sbjct: 740 IRNQLFRCSEKVGLVEKNDQARMKIGNIAGYINARITRCFISGFPMNIVQLGPTGYQTMG 799 Query: 714 KDNQ--VVQLHPSTVLD--------HKPEWVLYNEFVLTTKNYIRTCTDI-KPEWLVKIA 762 + + V +HP+++L ++VLY + +LT+K +IR C I K EWL+ + Sbjct: 800 RSSGGLNVSVHPTSILFVNHKEKAQRPSKYVLYQQLMLTSKEFIRDCLVIPKEEWLIDMV 859 Query: 763 PQYYD 767 PQ + Sbjct: 860 PQIFK 864 >5VHD-D nrPDB Length = 870 Score = 744 bits (1921), Expect = 0.0, Method: Composition-based stats. Identities = 230/726 (31%), Positives = 364/726 (50%), Gaps = 102/726 (14%) Query: 126 RYYDILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVE-YMRSLPGP 184 RY ++ + R +LP + + +++ HQ V+ GETG GKTTQ+ Q+ ++ Y+ G Sbjct: 49 RYIEMQRFREKLPSYGMQKELVNMIDNHQVTVISGETGCGKTTQVTQFILDNYIERGKGS 108 Query: 185 KRGVACTQPRRVAAMSVAQRVADEM--DVMLGQEVGYSIRFEDCSSAKTI-LKYMTDGML 241 + CTQPRR++A+SVA+RVA E G GY IR + K + Y T G++ Sbjct: 109 ACRIVCTQPRRISAISVAERVAAERAESCGNGNSTGYQIRLQSRLPRKQGSILYCTTGII 168 Query: 242 LREAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQ 301 L+ +DP L I+LDE HER L +D+LM V+K+++ R DLKV++MSATL+A KF Sbjct: 169 LQWLQSDPHLSSVSHIVLDEIHERNLQSDVLMTVVKDLLSYRPDLKVVLMSATLNAEKFS 228 Query: 302 IYFDNCPLLTIPGRTHPV----------EIFYTPEP-------------------ERDYL 332 YF NCP++ IPG T PV +I Y PE E+ Y Sbjct: 229 EYFGNCPMIHIPGFTFPVVEYLLEDIIEKIRYVPEQKEHRSQFKKGFMQGHVNRQEKYYY 288 Query: 333 EAA------------------------------------IRTVIQIHMCEEEEGDLLLFL 356 EA I +I+ + EEE+G +L+FL Sbjct: 289 EAIYKERWPGYLRELRQRYSASTVDVVEMMDDEKVDLNLIAALIRYIVLEEEDGAILVFL 348 Query: 357 TGQEEIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRK 416 G + I + +V + IIPL+S +P Q ++F+ PP RK Sbjct: 349 PGWDNISTLHDLLMSQV---MFKSDKFIIIPLHSLMPTVNQTQVFKRTPPGV------RK 399 Query: 417 VVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRT 476 +V++TNIAETS+TID VV+VID G K+ ++ + + ++ +SKA+A+QR GRAGR Sbjct: 400 IVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRV 459 Query: 477 RPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHF--DFMDPPAPE 534 +PG C+ LY + + D PEILR+ L + LQ+K L + + HF MDPP+ E Sbjct: 460 QPGHCYHLYNS-LRASLLDDYQLPEILRTPLEELCLQIKILRLGGIAHFLSRLMDPPSNE 518 Query: 535 TLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITAML 594 ++ +++ L L AL+ +LT LG +A P++P + KM++ + C + VL+I A L Sbjct: 519 AVLLSIKHLMELNALDKQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASL 578 Query: 595 SVPQCFVRPTEAKKAADEAKMRFA-HIDGDHLTLLNVYHAFKQNH-----ESVQWCYDNF 648 S FV P +K AD + A DHLT++N + +++ +C++ F Sbjct: 579 SFKDPFVIPLGKEKVADARRKELAKDTKSDHLTVVNAFKGWEKAKQRGFRYEKDYCWEYF 638 Query: 649 INYRSLMSADNVRQQLSR--IMDRFNLPRRSTDFTSRDYYIN---IRKALVTGYFMQVAH 703 ++ +L N++ Q + + F R D S N I+ + G + +VA Sbjct: 639 LSSNTLQMLHNMKGQFAEHLLGAGFVSSRNPQDPESNINSDNEKIIKAVICAGLYPKVAK 698 Query: 704 L------ERTGHYLTVKDNQVVQLHPSTVLDHKPE----WVLYNEFVLTTKNYIRTCTDI 753 + +R + K + VV +HP +V + E W++Y+ + T+ Y+ CT++ Sbjct: 699 IRLNLGKKRKMVKVYTKTDGVVAIHPKSVNVEQTEFNYNWLIYHLKMRTSSIYLYDCTEV 758 Query: 754 KPEWLV 759 P L+ Sbjct: 759 SPYCLL 764 >5N8S-A nrPDB Length = 944 Score = 692 bits (1786), Expect = 0.0, Method: Composition-based stats. Identities = 230/711 (32%), Positives = 353/711 (49%), Gaps = 89/711 (12%) Query: 131 LKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEY-MRSLPGPKRGVA 189 L+ R +LP +Y D + +Q ++VG TG GKTTQ+PQ ++ + + Sbjct: 147 LEARKKLPTMKYADDIIQAVRENQVILIVGSTGCGKTTQVPQILLDDAISRGCASSCRII 206 Query: 190 CTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCS-SAKTILKYMTDGMLLREAMND 248 CTQPRR++A+++A+ V+ E LG VGY IR E + + Y T G+LL++ +D Sbjct: 207 CTQPRRISAIAIAEWVSYERCESLGNSVGYQIRLESRKARERASITYCTTGVLLQQLQSD 266 Query: 249 PLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCP 308 PL+ V+ILDE HER++ TD+LMG+LK ++ R DLKVI+MSAT+ F YF+NCP Sbjct: 267 PLMHNLSVLILDEIHERSVETDLLMGLLKVILPHRPDLKVILMSATVREQDFCDYFNNCP 326 Query: 309 LLTIPGRTHPVEIFYTPE----------------PERD----------YLEAAIRTV--- 339 + I G PV++ Y + P+RD +E +R + Sbjct: 327 MFRIEGVMFPVKMLYLEDVLSKTNYEFQKFRDRRPKRDPPERRMKHEAMIEPYLRRIRNS 386 Query: 340 -------------------------IQIHMCE-EEEGDLLLFLTGQEEIDEACKRIKREV 373 + ++CE E EG +L+FL G ++I + + + Sbjct: 387 YDSRVLDKLRLPESEGCEDIDFIADLVYYICENEPEGAILVFLPGYDKISQLYNILDKPK 446 Query: 374 DDLGPEVGD-IKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTIDG 432 G D + + PL+S + +QQ +F PP A RKV++ST IAETS+TID Sbjct: 447 TSKGQRWRDHMAVFPLHSLMQSGEQQAVFRRPP------AGQRKVIISTIIAETSVTIDD 500 Query: 433 VVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKT 492 VV+VI+ G K Y+ ++SL ++KA+ QQR GRAGR RPG C+ L+ +A + Sbjct: 501 VVYVINSGRTKATNYDIETNIQSLDEVWVTKANTQQRRGRAGRVRPGICYNLF-SRARED 559 Query: 493 EMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHF--DFMDPPAPETLMRALELLNYLAALN 550 M D PEILRS L S++L LK L IDD F ++ P PE + +ELL + AL+ Sbjct: 560 RMDDIPTPEILRSKLESIILSLKLLHIDDPYRFLQTLINAPNPEAIKMGVELLKRIEALD 619 Query: 551 DDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITAMLSVPQCFVRPTEAKKAA 610 G LT LG +A+ P+DPQ+ KM++ S + C + + S A LS F P + Sbjct: 620 QTGTLTPLGMHLAKLPIDPQMGKMILMSALFCCLDPITSAAAALSFKSPFYSPLGKESRV 679 Query: 611 DEAKMRFA-HIDGDHLTLLNVYHAFKQ---NHESVQWCYDNFINYRSLMSADNVRQQLSR 666 DE K R A ++ DHL + N A++ +H +CY NF++ +L + ++ Q S Sbjct: 680 DEIKRRMARNMRSDHLMVHNTIIAYRDSRYSHAERDFCYKNFLSSMTLQQLERMKNQFSE 739 Query: 667 IMDRFNLPRRST--DFTSRDYYINI---RKALVTGYFMQVAHLE---------RTGHYLT 712 ++ + S D S I R + G + +AHL R H + Sbjct: 740 LLYNYKFLASSNCKDAASNKNSEKIPLLRAIIGAGLYPNMAHLRKSRQIKNRVRAIHTMA 799 Query: 713 VKDNQVVQLHPSTVLDH----KPEWVLYNEFVLTTKNYIRTCTDIKPEWLV 759 D + V HPS+V + +Y + +T ++ T + P L+ Sbjct: 800 TDDGRRVNFHPSSVNSGESGFDSAYFVYFQRQKSTDLFLLDSTMVFPMALI 850 >6HEG-A nrPDB Length = 809 Score = 447 bits (1150), Expect = e-126, Method: Composition-based stats. Identities = 158/446 (35%), Positives = 236/446 (52%), Gaps = 24/446 (5%) Query: 136 QLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGVACTQPRR 195 LPV L +L TG+GK+T +P + + PG + +PRR Sbjct: 3 SLPVAAVLPELLTALDCAPQVLLSAPTGAGKSTWLPLQLLAH----PGINGKIILLEPRR 58 Query: 196 VAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLLERYG 255 +AA +VAQR+A+ ++ G VGY +R ++C T L+ +T+G+L R DP L G Sbjct: 59 LAARNVAQRLAELLNEKPGDTVGYRMRAQNCVGPNTRLEVVTEGVLTRMIQRDPELSGVG 118 Query: 256 VIILDEAHERTLATDILMGVLKEVVRQ-RSDLKVIVMSATLDAGKFQIYFDNCPLLTIPG 314 ++ILDE HER+L D+ + +L +V + R DLK+++MSATLD + Q P++ G Sbjct: 119 LVILDEFHERSLQADLALALLLDVQQGLRDDLKLLIMSATLDNDRLQQMLPEAPVVISEG 178 Query: 315 RTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRIKREVD 374 R+ PVE Y P P + A+ V M +E G LLLFL G EI +R + Sbjct: 179 RSFPVERRYLPLPAHQRFDDAV-AVATAEMLRQESGSLLLFLPGVGEI-------QRVQE 230 Query: 375 DLGPEVG-DIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTIDGV 433 L +G D+ + PLY L Q++ P P RKVV++TNIAETSLTI+G+ Sbjct: 231 QLASRIGSDVLLCPLYGALSLNDQRKAILPAPQGM------RKVVLATNIAETSLTIEGI 284 Query: 434 VFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYT-EKAYKT 492 V+D + ++PR + L+ +S+AS QRAGRAGR PG L E+A + Sbjct: 285 RLVVDCAQERVARFDPRTGLTRLITQRVSQASMTQRAGRAGRLEPGISLHLIAKEQAERA 344 Query: 493 EMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALNDD 552 Q + PEIL+S+L ++++L + G D ++D P L+ A LL L AL + Sbjct: 345 AAQ--SEPEILQSDLSGLLMELLQWGCSDPAQMSWLDQPPVVNLLAAKRLLQMLGALEGE 402 Query: 553 GDLTELGSMMAEFPLDPQLAKMVIAS 578 L+ G MA DP+LA M++++ Sbjct: 403 -RLSAQGQKMAALGNDPRLAAMLVSA 427 >3I4U-A nrPDB Length = 270 Score = 346 bits (887), Expect = 3e-95, Method: Composition-based stats. Identities = 109/238 (45%), Positives = 152/238 (63%), Gaps = 5/238 (2%) Query: 532 APETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSIT 591 ETL+ A+E L L AL+D+G LT LG MAEFPL+P L KM+I S CS E+L+I Sbjct: 16 PMETLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIV 75 Query: 592 AMLSVPQCFVRPTEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQNHESVQWCYDNFINY 651 +MLSV F RP + + AD+ K +F +GDHLTLL VY+++K N S WCY+NFI Sbjct: 76 SMLSVQNVFYRPKDKQALADQKKAKFHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFIQA 135 Query: 652 RSLMSADNVRQQLSRIMDRFNLPRRSTDFTSRDYYINIRKALVTGYFMQVAHLERTGHYL 711 RSL A ++R+Q+ IMDR L S ++ + ++KA+ +G+F A + Y Sbjct: 136 RSLRRAQDIRKQMLGIMDRHKLDVVSCGKST----VRVQKAICSGFFRNAAKKDPQEGYR 191 Query: 712 TVKDNQVVQLHPSTVL-DHKPEWVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPQYYDM 768 T+ D QVV +HPS+ L + +PEWV+Y+E VLTTK Y+R T I P WLV+ AP ++ + Sbjct: 192 TLIDQQVVYIHPSSALFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKV 249 >5WX1-A nrPDB Length = 733 Score = 337 bits (865), Expect = 8e-93, Method: Composition-based stats. Identities = 99/416 (23%), Positives = 171/416 (41%), Gaps = 86/416 (20%) Query: 161 ETGSGKTTQIPQWCVEYMRSLPGPKRGVACTQPRRVAAMSVAQRVADEMDVMLGQEVGYS 220 TG+GKTT++P+ +E + G + V P R AA SV Q + + + ++ Sbjct: 277 ATGAGKTTELPRSVIEEI----GRHKRVLVLIPLRAAAESVYQYMRQKH-----PSIAFN 327 Query: 221 IRFEDCSSA--KTILKYMTDGMLLREAMNDPLLE----RYGVIILDEAHERTLATDILMG 274 +R + T + Y + G + M P L Y I LDE H AT + Sbjct: 328 LRIGEMKEGDMATGITYASYGYFCQ--MPQPKLRAAMVEYSFIFLDEYH---CATPEQLA 382 Query: 275 VLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEPER----- 329 ++ ++ R +L+V+ M+AT AG +T G+ HP+E F PE + Sbjct: 383 IMGKIHRFSENLRVVAMTAT-PAGT----------VTTTGQKHPIEEFIAPEVMKGEDLG 431 Query: 330 -DYLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRIKREVDDLGPEVGDIKIIPL 388 +YL+ A + EE + ++L+F+ + E K++K + + G Sbjct: 432 SEYLDIAGLKI----PVEEMKSNMLVFVPTRNMAVETAKKLKAKGYNSGY---------Y 478 Query: 389 YSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYN 448 YS P + + P VVV+TN E+ +T+ + V+D G +K Sbjct: 479 YSGEDPSNLRVVTSQSP----------YVVVATNAIESGVTLPDLDVVVDTGLKCEKRIR 528 Query: 449 PRIR----VESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILR 504 + V L A++ QR GR GR +PG+ +R + +D Y Sbjct: 529 LSSKMPFIVTGLKRMAVTIGEQAQRRGRVGRVKPGRYYR---SQETPVGSKDYHYD---- 581 Query: 505 SNLGSVVLQLKKLGIDDLV---------HFDFMDPPAPETLMRALELLNYLAALND 551 +LQ ++ GI+D + ++D+ ++ LE+LN L + Sbjct: 582 ------LLQAQRYGIEDGINITKSFREMNYDWSLYEEDSLMITQLEILNNLLISEE 631 >4CBI-A nrPDB Length = 516 Score = 337 bits (864), Expect = 1e-92, Method: Composition-based stats. Identities = 100/416 (24%), Positives = 173/416 (41%), Gaps = 86/416 (20%) Query: 161 ETGSGKTTQIPQWCVEYMRSLPGPKRGVACTQPRRVAAMSVAQRVADEMDVMLGQEVGYS 220 TG+GKTT++P+ +E + G + V P R AA SV Q + + + ++ Sbjct: 52 ATGAGKTTELPRSVIEEI----GRHKRVLVLIPLRAAAESVYQYMRQKH-----PSIAFN 102 Query: 221 IRFEDCSSA--KTILKYMTDGMLLREAMNDPLLE----RYGVIILDEAHERTLATDILMG 274 +R + T + Y + G + M+ P L Y I LDE H AT + Sbjct: 103 LRIGEMKEGDMATGITYASYGYFCQ--MSQPKLRAAMVEYSFIFLDEYH---CATPEQLA 157 Query: 275 VLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEPER----- 329 ++ ++ R +L+V+ M+AT AG +T G+ HP+E F PE + Sbjct: 158 IMGKIHRFSENLRVVAMTAT-PAGT----------VTTTGQKHPIEEFIAPEVMKGEDLG 206 Query: 330 -DYLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRIKREVDDLGPEVGDIKIIPL 388 +YL+ A + EE + ++L+F+ + EA K++K + + G Sbjct: 207 SEYLDIAGLKI----PVEEMKNNMLVFVPTRNMAVEAAKKLKAKGYNSGY---------Y 253 Query: 389 YSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYN 448 YS P + + P VVV+TN E+ +T+ + V+D G +K Sbjct: 254 YSGEDPSNLRVVTSQSP----------YVVVATNAIESGVTLPDLDVVVDTGLKCEKRIR 303 Query: 449 PRIR----VESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILR 504 + V L A++ QR GR GR +PG+ +R + +D Y Sbjct: 304 LSPKMPFIVTGLKRMAVTIGEQAQRRGRVGRVKPGRYYR---SQETPVGSKDYHYD---- 356 Query: 505 SNLGSVVLQLKKLGIDDLV---------HFDFMDPPAPETLMRALELLNYLAALND 551 +LQ ++ GI+D + ++D+ ++ LE+LN L + Sbjct: 357 ------LLQAQRYGIEDGINITKSFREMNYDWSLYEEDSLMITQLEILNNLLISEE 406 >5WSO-A nrPDB Length = 476 Score = 337 bits (863), Expect = 1e-92, Method: Composition-based stats. Identities = 100/412 (24%), Positives = 171/412 (41%), Gaps = 78/412 (18%) Query: 161 ETGSGKTTQIPQWCVEYMRSLPGPKRGVACTQPRRVAAMSVAQRVADEMDVMLGQEVGYS 220 TG+GKTT++P+ +E + G + V P R AA SV Q + + + ++ Sbjct: 20 ATGAGKTTELPKAVIEEI----GRHKRVLVLIPLRAAAESVYQYMRLKH-----PSISFN 70 Query: 221 IRFEDCSSA--KTILKYMTDGMLLREAMNDPLLE----RYGVIILDEAHERTLATDILMG 274 +R D T + Y + G + M P L Y I LDE H AT + Sbjct: 71 LRIGDMKEGDMATGITYASYGYFCQ--MPQPKLRAAMVEYSYIFLDEYH---CATPEQLA 125 Query: 275 VLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEPER-DYLE 333 ++ ++ R ++V+ M+AT AG +T G+ HP+E F PE + + L Sbjct: 126 IIGKIHRFSESIRVVAMTAT-PAGS----------VTTTGQKHPIEEFIAPEVMKGEDLG 174 Query: 334 AAIRTVIQIH-MCEEEEGDLLLFLTGQEEIDEACKRIKREVDDLGPEVGDIKIIPLYSTL 392 + + + +E +G++L+F+ + E K++K + + G YS Sbjct: 175 SQFLDIAGLKIPVDEMKGNMLVFVPTRNMAVEVAKKLKAKGYNSGY---------YYSGE 225 Query: 393 PPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIR 452 P + + P V+V+TN E+ +T+ + VID G +K + Sbjct: 226 DPANLRVVTSQSP----------YVIVATNAIESGVTLPDLDTVIDTGLKCEKRVRVSSK 275 Query: 453 ----VESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLG 508 V L A++ QR GR GR +PG+ +R + T +D Y Sbjct: 276 IPFIVTGLKRMAVTVGEQAQRRGRVGRVKPGRYYR---SQETATGSKDYHYD-------- 324 Query: 509 SVVLQLKKLGIDDLV---------HFDFMDPPAPETLMRALELLNYLAALND 551 +LQ ++ GI+D + ++D+ L+ LE+LN L D Sbjct: 325 --LLQAQRYGIEDGINVTKSFREMNYDWSLYEEDSLLITQLEILNNLLISED 374 >3LLM-A nrPDB Length = 235 Score = 240 bits (613), Expect = 2e-63, Method: Composition-based stats. Identities = 65/185 (35%), Positives = 114/185 (61%), Gaps = 4/185 (2%) Query: 130 ILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEY-MRSLPGPKRGV 188 IL++R LPV +++ + + ++ ++ G TG GKTTQ+PQ+ ++ +++ + + Sbjct: 53 ILQERELLPVKKFESEILEAISQNSVVIIRGATGCGKTTQVPQFILDDFIQNDRAAECNI 112 Query: 189 ACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDC-SSAKTILKYMTDGMLLREAMN 247 TQPRR++A+SVA+RVA E G+ GYS+RFE + + T G+LLR+ Sbjct: 113 VVTQPRRISAVSVAERVAFERGEEPGKSCGYSVRFESILPRPHASIMFCTVGVLLRKL-- 170 Query: 248 DPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNC 307 + + +I+DE HER + TD L+ VL++VV+ ++++++MSAT+D F YF NC Sbjct: 171 EAGIRGISHVIVDEIHERDINTDFLLVVLRDVVQAYPEVRIVLMSATIDTSMFCEYFFNC 230 Query: 308 PLLTI 312 P++ + Sbjct: 231 PIIEV 235 >2P6R-A nrPDB Length = 702 Score = 71.7 bits (174), Expect = 1e-12, Method: Composition-based stats. Identities = 102/629 (16%), Positives = 203/629 (32%), Gaps = 91/629 (14%) Query: 130 ILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGVA 189 ILK+ ++ + + + ++ +L T +GKT V Sbjct: 17 ILKEEGIEELFPPQAEAVEKVFSGKNLLLAMPTAAGKTLLAEMAMVREAIKG----GKSL 72 Query: 190 CTQPRRVAAMSVAQRVA--DEMDVMLGQEVG-YSIRFEDCSSAKTILKYMTDG-MLLREA 245 P R A + +++ + +G G Y R E I+ L+R Sbjct: 73 YVVPLRALAGEKYESFKKWEKIGLRIGISTGDYESRDEHLGDCDIIVTTSEKADSLIRN- 131 Query: 246 MNDPLLERYGVIILDEAH----ERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQ 301 ++ +++DE H E+ AT L ++ ++ R L+VI +SAT Sbjct: 132 -RASWIKAVSCLVVDEIHLLDSEKRGAT--LEILVTKMRRMNKALRVIGLSATAPNVTEI 188 Query: 302 IYFDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAI---RTVIQIHMCEE---EEGDLLLF 355 + + R P+ E + + A R V + EE E G +L+F Sbjct: 189 AEWLDADYYVSDWRPVPLVEGVLCEGTLELFDGAFSTSRRVKFEELVEECVAENGGVLVF 248 Query: 356 LTGQEEIDEACKRIKREV---------------DDLGPEVGDIKII-----PLYSTLPPQ 395 + + ++ ++ ++ G + + Sbjct: 249 ESTRRGAEKTAVKLSAITAKYVENEGLEKAILEENEGEMSRKLAECVRKGAAFHHAGLLN 308 Query: 396 QQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVES 455 Q+R+ E KVVV+T + + ++ + Y+ RI+V Sbjct: 309 GQRRVVEDA-----FRRGNIKVVVATPTLAAGVNLPARRVIVRS-LYRFDGYSKRIKVSE 362 Query: 456 LLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDN--TYPEILRSNLG-SVVL 512 RAGR G G+ + ++ + ++ PE + S LG L Sbjct: 363 YK-------QMAGRAGRPGMDERGEAIIIVGKRDREIAVKRYIFGEPERITSKLGVETHL 415 Query: 513 QLKKLGI------------DDLVHFDFMDPPAPETLMRALE----LLNYLAALNDDGDL- 555 + L I +D F +L LE L + + L Sbjct: 416 RFHSLSIICDGYAKTLEELEDFFADTFFFKQNEISLSYELERVVRQLENWGMVVEAAHLA 475 Query: 556 -TELGSMMAEFPLDPQLAKM---VIASCDYNCSNEVLSITAMLSVPQCFVRPTEA--KKA 609 T+LGS+++ +DP + V++ + + + I + + VR T++ ++ Sbjct: 476 PTKLGSLVSRLYIDPLTGFIFHDVLSRMELSDIGALHLICRTPDMERLTVRKTDSWVEEE 535 Query: 610 ADEAKMRFAHIDGDHLTLLNVY----------HAFKQNHESVQWCYDNFINYRSLMSADN 659 A + ++ D + + + + + + C I L Sbjct: 536 AFRLRKELSYYPSDFSVEYDWFLSEVKTALCLKDWIEEKDEDEICAKYGIAPGDLRRIVE 595 Query: 660 VRQQLSRIMDRFNLPRRSTDFTSRDYYIN 688 + LS M+R +T + I Sbjct: 596 TAEWLSNAMNRIAEEVGNTSVSGLTERIK 624 >2WV9-A nrPDB Length = 673 Score = 68.2 bits (165), Expect = 1e-11, Method: Composition-based stats. Identities = 76/349 (21%), Positives = 129/349 (36%), Gaps = 53/349 (15%) Query: 130 ILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQI-PQWCVEYMRSLPGPKRGV 188 + +R++ PV E + ++L + Q VL G+GKT +I PQ + ++ + Sbjct: 220 VQGERVEEPVPEAYNP--EMLKKRQLTVLDLHPGAGKTRRILPQIIKDAIQ----KRLRT 273 Query: 189 ACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMND 248 A P RV A +A+ + L V + S I+ M L M+ Sbjct: 274 AVLAPTRVVAAEMAEALRGLPVRYLTPAV------QREHSGNEIVDVMCHATLTHRLMSP 327 Query: 249 PLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCP 308 + Y + ++DEAH A+ G + V I M+AT F + Sbjct: 328 LRVPNYNLFVMDEAHFTDPASIAARGYIATRVEAGEA-AAIFMTATPPGT--SDPFPDT- 383 Query: 309 LLTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKR 368 PV + P+R + + G + F+ + +E + Sbjct: 384 -------NSPVHDVSSEIPDRAWSS-------GFEWITDYAGKTVWFVASVKMSNEIAQC 429 Query: 369 IKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSL 428 ++R + Q ++ ++ PK +NG V++T+I+E Sbjct: 430 LQRAGKRVI-----------------QLNRKSYDTEYPKCKNGDWD--FVITTDISEMGA 470 Query: 429 TIDGVVFVIDPGF-AKQKVYNPRIRVESLLV-TAISKASAQQRAGRAGR 475 G VID K + + L V +AI+ ASA QR GR GR Sbjct: 471 NF-GASRVIDCRKSVKPTILDEGEGRVILSVPSAITSASAAQRRGRVGR 518 >2V8O-A nrPDB Length = 444 Score = 67.8 bits (164), Expect = 2e-11, Method: Composition-based stats. Identities = 72/331 (21%), Positives = 120/331 (36%), Gaps = 51/331 (15%) Query: 148 DILVRHQSFVLVGETGSGKTTQI-PQWCVEYMRSLPGPKRGVACTQPRRVAAMSVAQRVA 206 ++L + Q VL G+GKT +I PQ + ++ + A P RV A +A+ + Sbjct: 7 EMLKKRQLTVLDLHPGAGKTRRILPQIIKDAIQ----KRLRTAVLAPTRVVAAEMAEALR 62 Query: 207 DEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLLERYGVIILDEAHERT 266 L V + S I+ M L M+ + Y + ++DEAH Sbjct: 63 GLPVRYLTPAV------QREHSGNEIVDVMCHATLTHRLMSPLRVPNYNLFVMDEAHFTD 116 Query: 267 LATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPE 326 A+ G + V I M+AT F + PV + Sbjct: 117 PASIAARGYIATRVEAGEA-AAIFMTATPPGT--SDPFPDT--------NSPVHDVSSEI 165 Query: 327 PERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRIKREVDDLGPEVGDIKII 386 P+R + + G + F+ + +E + ++R + Sbjct: 166 PDRAWSS-------GFEWITDYAGKTVWFVASVKMSNEIAQCLQRAGKRVI--------- 209 Query: 387 PLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGF-AKQK 445 Q ++ ++ PK +NG V++T+I+E G VID K Sbjct: 210 --------QLNRKSYDTEYPKCKNGDWD--FVITTDISEMGANF-GASRVIDCRKSVKPT 258 Query: 446 VYNPRIRVESLLV-TAISKASAQQRAGRAGR 475 + + L V +AI+ ASA QR GR GR Sbjct: 259 ILDEGEGRVILSVPSAITSASAAQRRGRVGR 289 >2Z83-A nrPDB Length = 459 Score = 66.7 bits (161), Expect = 4e-11, Method: Composition-based stats. Identities = 70/333 (21%), Positives = 115/333 (34%), Gaps = 55/333 (16%) Query: 148 DILVRHQSFVLVGETGSGKTTQI-PQWCVEYMRSLPGPKRGVACTQPRRVAAMSVAQRVA 206 ++L + Q VL GSGKT +I PQ + ++ + A P RV A +A+ + Sbjct: 16 NMLRKRQMTVLDLHPGSGKTRKILPQIIKDAIQQ----RLRTAVLAPTRVVAAEMAEALR 71 Query: 207 DEMDVMLGQEVGYSIR-FEDCSSAKTILKYMTDGMLLREAMNDPLLERYGVIILDEAHER 265 G V Y + I+ M L M+ + Y + ++DEAH Sbjct: 72 -------GLPVRYQTSAVQREHQGNEIVDVMCHATLTHRLMSPNRVPNYNLFVMDEAHFT 124 Query: 266 TLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCPLLTIPGRTHPVEIFYTP 325 A+ G + V I M+AT N P I Sbjct: 125 DPASIAARGYIATKVELGEA-AAIFMTATPPGTTDPFPDSNAP------------IHDLQ 171 Query: 326 EPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRIKREVDDLGPEVGDIKI 385 + D ++ E G + F+ + +E ++R + Sbjct: 172 DEIPDRAWSSG-----YEWITEYAGKTVWFVASVKMGNEIAMCLQRAGKKVI-------- 218 Query: 386 IPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQK 445 Q ++ ++ PK +NG V++T+I+E G VID K Sbjct: 219 ---------QLNRKSYDTEYPKCKNGDWD--FVITTDISEMGANF-GASRVIDC-RKSVK 265 Query: 446 VYNPRIRVESLLV---TAISKASAQQRAGRAGR 475 +++ + I+ ASA QR GR GR Sbjct: 266 PTILEEGEGRVILGNPSPITSASAAQRRGRVGR 298 >2V6J-A nrPDB Length = 431 Score = 65.1 bits (157), Expect = 1e-10, Method: Composition-based stats. Identities = 64/326 (19%), Positives = 116/326 (35%), Gaps = 52/326 (15%) Query: 152 RHQSFVLVGETGSGKTTQ-IPQWCVEYMRSLPGPKRGVACTQPRRVAAMSVAQRVADEMD 210 + + VL G+GKT + +PQ E ++ + P RV A + + E Sbjct: 1 KRELTVLDLHPGAGKTRRVLPQLVREAVK----KRLRTVILAPTRVVASETYEALRGEPI 56 Query: 211 VMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLLERYGVIILDEAHERTLATD 270 + V + + I+ +M + + + Y + I+DEAH A+ Sbjct: 57 RYMTPAV------QSERTGNEIVDFMCHSTFTMKLLQGVRVPNYNLYIMDEAHFLDPASV 110 Query: 271 ILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEPERD 330 G ++ V D I M+AT N P++ R P+ + Sbjct: 111 AARGYIETRVSM-GDAGAIFMTATPPGTTEAFPPSNSPIIDEETR--------IPDKAWN 161 Query: 331 YLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRIKREVDDLGPEVGDIKIIPLYS 390 E +G + F+ ++ E +++ + Sbjct: 162 ---------SGYEWITEFDGRTVWFVHSIKQGAEIGTCLQKAGKKVLY------------ 200 Query: 391 TLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFA-KQKVYNP 449 ++ FE PK ++ V++T+I+E VIDP K + + Sbjct: 201 -----LNRKTFESEYPKCKSEKWD--FVITTDISEMGANFKA-DRVIDPRKTIKPILLDG 252 Query: 450 RIRVESLLVTAISKASAQQRAGRAGR 475 R+ ++ + AI+ ASA QR GR GR Sbjct: 253 RVSMQGPI--AITPASAAQRRGRIGR 276 >5K8T-A nrPDB Length = 458 Score = 65.1 bits (157), Expect = 1e-10, Method: Composition-based stats. Identities = 81/387 (20%), Positives = 136/387 (35%), Gaps = 60/387 (15%) Query: 132 KKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQ-IPQWCVEYMRSLPGPKRGVAC 190 ++ + PV ++ + Q VL G+GKT + +P+ E +++ + Sbjct: 6 RREEETPVECFEPSML---KKKQLTVLDLHPGAGKTRRVLPEIVREAIKT----RLRTVI 58 Query: 191 TQPRRVAAMSVAQRVADEMDVML-GQEVGYSIRFEDCSSAKT-ILKYMTDGMLLREAMND 248 P RV VA EM+ L G V Y + + + T I+ M + Sbjct: 59 LAPTRV--------VAAEMEEALRGLPVRYMTTAVNVTHSGTEIVDLMCHATFTSRLLQP 110 Query: 249 PLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCP 308 + Y + I+DEAH ++ G + V I M+AT + N P Sbjct: 111 IRVPNYNLYIMDEAHFTDPSSIAARGYISTRVEMGEA-AAIFMTATPPGTRDAFPDSNSP 169 Query: 309 LLTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKR 368 ++ VE+ PER + + G + F+ +E Sbjct: 170 IMDTE-----VEV-----PERAWSS-------GFDWVTDHSGKTVWFVPSVRNGNEIAAC 212 Query: 369 IKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSL 428 + G V + ++ FE ++ VV+T+I+E Sbjct: 213 L----TKAGKRVIQLS-------------RKTFET--EFQKTKHQEWDFVVTTDISEMGA 253 Query: 429 TIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGR--TRPGKCFRLYT 486 VID + V RV ++ ASA QR GR GR +PG + LY Sbjct: 254 NFKA-DRVIDSRRCLKPVILDGERVILAGPMPVTHASAAQRRGRIGRNPNKPGDEY-LYG 311 Query: 487 EKAYKTEMQDNTYPEILRSNLGSVVLQ 513 +T+ + E R L ++ LQ Sbjct: 312 GGCAETDEDHAHWLE-ARMLLDNIYLQ 337 >2QEQ-A nrPDB Length = 434 Score = 64.4 bits (155), Expect = 2e-10, Method: Composition-based stats. Identities = 70/333 (21%), Positives = 114/333 (34%), Gaps = 63/333 (18%) Query: 152 RHQSFVLVGETGSGKTTQI-PQWCVEYMRSLPGPKRGVACTQPRRVAAMSVAQRVADEMD 210 + Q VL G+GKT +I PQ E + + A P RV A +A+ + Sbjct: 1 KKQITVLDLHPGAGKTRRILPQIIKEAI----NRRLRTAVLAPTRVVAAEMAEALR---- 52 Query: 211 VMLGQEVGYSIRFEDCS-----SAKTILKYMTDGMLLREAMNDPLLERYGVIILDEAHER 265 G IR++ + + I+ M L M+ + Y + ++DEAH Sbjct: 53 -------GLPIRYQTSAVAREHNGNEIVDVMCHATLTHRLMSPHRVPNYNLFVMDEAHFT 105 Query: 266 TLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCPLLTIPGRTHPVEIFYTP 325 A+ G + V I M+AT F P+ T Sbjct: 106 DPASIAARGYISTRVELGEA-AAIFMTATPPGT--SDPFPESNA--------PISDLQTE 154 Query: 326 EPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRIKREVDDLGPEVGDIKI 385 P+R + E G + F+ + +E ++R + Sbjct: 155 IPDRAWNS-------GYEWITEYIGKTVWFVPSVKMGNEIALCLQRAGKKVI-------- 199 Query: 386 IPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQK 445 Q ++ +E PK +N VV+T+I+E VID K Sbjct: 200 ---------QLNRKSYETEYPKCKNDDWD--FVVTTDISEMGANFKASR-VIDS-RKSVK 246 Query: 446 VYNPRIRVESLLV---TAISKASAQQRAGRAGR 475 +++ +A++ ASA QR GR GR Sbjct: 247 PTIITEGEGRVILGEPSAVTAASAAQRRGRTGR 279 >1HV8-A nrPDB Length = 367 Score = 63.6 bits (153), Expect = 3e-10, Method: Composition-based stats. Identities = 64/350 (18%), Positives = 122/350 (34%), Gaps = 60/350 (17%) Query: 156 FVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGVACTQPRRVAAMSVAQRVADEMDVMLGQ 215 V TGSGKT +E + G + P R A+ VA + + Sbjct: 47 IVAQARTGSGKTASFAIPLIELVNENNGIEA--IILTPTRELAIQVADEIESLKGNKNLK 104 Query: 216 EV----GYSIRFEDCSSAKTILKYMTDGMLLREAMNDPL-LERYGVIILDEAHERTLATD 270 G +I + + + T G +L L L+ ILDEA E Sbjct: 105 IAKIYGGKAIYPQIKALKNANIVVGTPGRILDHINRGTLNLKNVKYFILDEADEM----- 159 Query: 271 ILMGVLKEVVRQ----RSDLKVIVMSATLDAGKF---QIYFDNCPLLTIPGRTHPVEIFY 323 + MG +K+V + D ++++ SAT+ + Y + + + +E Y Sbjct: 160 LNMGFIKDVEKILNACNKDKRILLFSATMPREILNLAKKYMGDYSFIKAKINAN-IEQSY 218 Query: 324 TPEPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRIKREVDDLGPEVGDI 383 E + EA R + + +E L+F + + E ++ G Sbjct: 219 VEVNENERFEALCR------LLKNKEFYGLVFCKTKRDTKELASMLRDIGFKAG------ 266 Query: 384 KIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAK 443 ++ L Q++++ +++++T++ + ++ + VI+ + Sbjct: 267 ---AIHGDLSQSQREKVIR------LFKQKKIRILIATDVMSRGIDVNDLNCVINYHLPQ 317 Query: 444 Q-KVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKT 492 + Y RI R GRAG + GK + + YK Sbjct: 318 NPESYMHRIG----------------RTGRAG--KKGKAISIINRREYKK 349 >6C90-A nrPDB Length = 734 Score = 62.1 bits (149), Expect = 9e-10, Method: Composition-based stats. Identities = 56/277 (20%), Positives = 107/277 (38%), Gaps = 48/277 (17%) Query: 121 LPHTPRYYDILKKRLQLP--VWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYM 178 LP PR + K + P + ++ + +QS ++ T +GKT C EY Sbjct: 56 LPLKPR---VGKAAKEYPFILDAFQREAIQCVDNNQSVLVSAHTSAGKTV-----CAEYA 107 Query: 179 RSLPGPKR-GVACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCS-SAKTILKYM 236 +L ++ V T P + + + + +E Q+VG + D + + M Sbjct: 108 IALALREKQRVIFTSPIKALSNQKYREMYEEF-----QDVG--LMTGDVTINPTASCLVM 160 Query: 237 TDGMLLREAMNDPL-LERYGVIILDEAH-----ERTLATDILMGVLKEVVRQRSDLKVIV 290 T +L + +I DE H ER + + + +L + ++ + Sbjct: 161 TTEILRSMLYRGSEVMREVAWVIFDEIHYMRDSERGVVWEETIILLPD------NVHYVF 214 Query: 291 MSATLD-AGKFQIYFDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEE 349 +SAT+ A +F + C L P H + Y P P + Y+ A +H+ +E Sbjct: 215 LSATIPNARQFAEWI--CHLHKQP--CHVIYTDYRPTPLQHYIFPAGGD--GLHLVVDEN 268 Query: 350 GDLLLFLTGQEEIDEACKRIK-----REVDDLGPEVG 381 GD ++ + A + ++ + D G + G Sbjct: 269 GDF-----REDNFNTAMQVLRDAGDLAKGDQKGRKGG 300 >4KBG-A nrPDB Length = 365 Score = 62.1 bits (149), Expect = 1e-09, Method: Composition-based stats. Identities = 66/339 (19%), Positives = 113/339 (33%), Gaps = 49/339 (14%) Query: 118 FTNLPHTPRYYDILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEY 177 F + P P + L R + + + + + TG+GKT E Sbjct: 3 FKDFPLKPEILEALHGRGLTTPTPIQAAALPLALEGKDLIGQARTGTGKTLAFALPIAER 62 Query: 178 M--RSLPGPKRGVACTQPRRVAAMSVA----------QRVADEMDVMLGQEVGYSIRFED 225 + G K P R A+ VA + VA G++ +R D Sbjct: 63 LAPSQERGRKPRALVLTPTRELALQVASELTAVAPHLKVVAVYGGTGYGKQKEALLRGAD 122 Query: 226 --CSSAKTILKYMTDGMLLREAMNDPLLERYGVIILDEAHER-TLATDILMGVLKEVVRQ 282 ++ L Y+ G+L L R V +LDEA E ++ + + L Sbjct: 123 AVVATPGRALDYLRQGVL--------DLSRVEVAVLDEADEMLSMGFEEEVEALLSATP- 173 Query: 283 RSDLKVIVMSATLD--AGKFQIYFDNCPLLTIPGRTHPV--EIFYTPEPERDYLEAAIRT 338 + ++ SATL A + + P+L + PV E P P R LE Sbjct: 174 -PSRQTLLFSATLPSWAKRLAERYMKNPVLINVIKDEPVTYEEEAVPAPVRGRLEVLSDL 232 Query: 339 VIQIHMCEEEEGDLLLFLTGQEEIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQ 398 + +F + E +E + + R L+ L +++ Sbjct: 233 LYVASPDRAM-----VFTRTKAETEEIAQGLLRLGH---------PAQALHGDLSQGERE 278 Query: 399 RIFEPPPPKKQNGAIGRKVVVSTNIAETSLTIDGVVFVI 437 R+ +V+V+T++A L I V V+ Sbjct: 279 RVL------GAFRQGEVRVLVATDVAARGLDIPQVDLVV 311 >2BMF-A nrPDB Length = 451 Score = 61.7 bits (148), Expect = 1e-09, Method: Composition-based stats. Identities = 64/336 (19%), Positives = 114/336 (33%), Gaps = 61/336 (18%) Query: 148 DILVRHQSFVLVGETGSGKTTQ-IPQWCVEYMRSLPGPKRGVACTQPRRVAAMSVAQRVA 206 DI + + ++ G+GKT + +P E ++ P RV VA Sbjct: 14 DIFRKKRLTIMDLHPGAGKTKRYLPAIVREAIK----RGLRTLILAPTRV--------VA 61 Query: 207 DEMDVML-GQEVGYS---IRFEDCSSAKTILKYMTDGMLLREAMNDPLLERYGVIILDEA 262 EM+ L G + Y IR E + + I+ M ++ + Y +II+DEA Sbjct: 62 AEMEEALRGLPIRYQTPAIRAEH--TGREIVDLMCHATFTMRLLSPIRVPNYNLIIMDEA 119 Query: 263 HERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCPLLTIPGRTHPVEIF 322 H A+ G + V I M+AT + N P++ E Sbjct: 120 HFTDPASIAARGYISTRVEMGEAAG-IFMTATPPGSRDPFPQSNAPIMD--------EER 170 Query: 323 YTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRIKREVDDLGPEVGD 382 PE + + +G + F+ + ++ +++ + Sbjct: 171 EIPERSWN---------SGHEWVTDFKGKTVWFVPSIKAGNDIAACLRKNGKKVIQLS-- 219 Query: 383 IKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFA 442 ++ F+ + VV+T+I+E VIDP Sbjct: 220 ---------------RKTFDS--EYIKTRTNDWDFVVTTDISEMGANFKAER-VIDP-RR 260 Query: 443 KQKVYNPRIRVESLLV---TAISKASAQQRAGRAGR 475 K E +++ ++ +SA QR GR GR Sbjct: 261 CMKPVILTDGEERVILAGPMPVTHSSAAQRRGRVGR 296 >2ZJO-A nrPDB Length = 482 Score = 61.3 bits (147), Expect = 1e-09, Method: Composition-based stats. Identities = 67/355 (18%), Positives = 111/355 (31%), Gaps = 81/355 (22%) Query: 120 NLPHTPRYYDILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMR 179 + P + ++ ++ PV+ + Q L TGSGK+T++P Sbjct: 11 GVDFVP--VESMETTMRSPVFTDNSSPPAVPQAFQVAHLHAPTGSGKSTKVPAAYAAQGY 68 Query: 180 SLPGPKRGVACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCS-SAKTILKYMTD 238 V P A + ++ V +IR + + + Y T Sbjct: 69 -------KVLVLNPSVAATLGFGAYMSKAHGVDP------NIRTGVRTITTGAPITYSTY 115 Query: 239 GMLLREAMNDPLLER--YGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLD 296 G L D Y +I+ DE H T + +G + + V++ +AT Sbjct: 116 GKFL----ADGGCSGGAYDIIMCDECHSTDSTTILGIGTVLDQAETAGARLVVLATATPP 171 Query: 297 AGKFQIYFDNCPLLTIPGRTHP--VEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDL-L 353 +T+P HP EI + E + AI E +G L Sbjct: 172 GS-----------VTVP---HPNIEEIALSNTGEIPFYGKAI-------PIETIKGGRHL 210 Query: 354 LFLTGQEEIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAI 413 +F +++ DE ++ I + Y L A Sbjct: 211 IFCHSKKKCDELAAKLSALG---------IHAVAYYRGLDVS-------------VIPAS 248 Query: 414 GRKVVVSTNIAETSLTID-------------GVVFVIDPGFAKQKVYNPRIRVES 455 G VVV+T+ T T D V F +DP F + P+ V Sbjct: 249 GNVVVVATDALMTGFTGDFDSVIDCNTCVTQTVDFSLDPTFTIETTTMPQDAVSR 303 >2WZQ-A nrPDB Length = 619 Score = 58.2 bits (139), Expect = 1e-08, Method: Composition-based stats. Identities = 65/338 (19%), Positives = 112/338 (33%), Gaps = 65/338 (19%) Query: 148 DILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGVACTQPRRVAAMSVAQRVAD 207 DI + + ++ G+GKT +I V + P RV VA Sbjct: 182 DIFRKKRLTIMDLHPGAGKTKRILPSIVREALK---RRLRTLILAPTRV--------VAA 230 Query: 208 EMDVMLGQEVGYSIRFED--CSSAKTI---LKYMTDGMLLREAMNDPLLERYGVIILDEA 262 EM+ L G IR++ S T + M ++ + Y +I++DEA Sbjct: 231 EMEEALR---GLPIRYQTPAVKSDHTGREIVDLMCHATFTTRLLSSTRVPNYNLIVMDEA 287 Query: 263 HERTLATDILMGVLKEVVRQRS--DLKVIVMSATLDAGKFQIYFDNCPLLTIPGRTHPVE 320 H + + + + I M+AT N P+ Sbjct: 288 HFTD---PCSVAARGYISTRVEMGEAAAIFMTATPPGSTDPFPQSNSPI----------- 333 Query: 321 IFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRIKREVDDLGPEV 380 + ER+ E + T + +G + F+ + ++ + G V Sbjct: 334 ----EDIEREIPERSWNT--GFDWITDYQGKTVWFVPSIKAGNDIANCL----RKSGKRV 383 Query: 381 GDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTIDGVVFVIDPG 440 + ++ F+ PK + VV+T+I+E VIDP Sbjct: 384 IQLS-------------RKTFDTEYPKTKLTDWD--FVVTTDISEMGANFRAGR-VIDP- 426 Query: 441 FAKQKVYNPRIRVESLLV---TAISKASAQQRAGRAGR 475 K E +++ ++ ASA QR GR GR Sbjct: 427 RRCLKPVILTDGPERVILAGPIPVTPASAAQRRGRIGR 464 >4OK6-A nrPDB Length = 464 Score = 57.1 bits (136), Expect = 3e-08, Method: Composition-based stats. Identities = 67/354 (18%), Positives = 111/354 (31%), Gaps = 71/354 (20%) Query: 154 QSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGVACTQPRRVAAMSVAQRVADEMDVML 213 Q L TGSGK+T++P V P A + ++ V Sbjct: 32 QVAHLHAPTGSGKSTKVPAAYAAQGY-------KVLVLNPSVAATLGFGAYMSKAHGVDP 84 Query: 214 GQEVGYSIRFEDCS-SAKTILKYMTDGMLLREAMNDPLLER--YGVIILDEAHERTLATD 270 +IR + + + + Y T G L D Y +II DE H + Sbjct: 85 ------NIRTGVRTITTGSPITYSTYGKFL----ADGGCSGGAYDIIICDECHSTDATSI 134 Query: 271 ILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEPERD 330 + +G + + V++ +AT + + + P Sbjct: 135 LGIGTVLDQAETAGARLVVLATATPPGSVTVSHPNIEEVALSTTGEIPF----------- 183 Query: 331 YLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRIKREVDDLG--PEVGDIKIIPL 388 Y +A VI+ G L+F +++ DE ++ + D+ +IP Sbjct: 184 YGKAIPLEVIK-------GGRHLIFCHSKKKCDELAAKLVALGINAVAYYRGLDVSVIPT 236 Query: 389 YSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTIDGVVFVIDPG----FAKQ 444 + VVVST+ T T VID Sbjct: 237 NGDV------------------------VVVSTDALMTGFT-GDFDSVIDCNTCVTQTVD 271 Query: 445 KVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNT 498 +P +E+ S QR GR GR +PG +R + M D++ Sbjct: 272 FSLDPTFTIET-TTLPQDAVSRTQRRGRTGRGKPGI-YRFVAPGERPSGMFDSS 323 >4B6E-A nrPDB Length = 683 Score = 57.1 bits (136), Expect = 3e-08, Method: Composition-based stats. Identities = 65/349 (18%), Positives = 110/349 (31%), Gaps = 83/349 (23%) Query: 128 YDILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRG 187 + ++ ++ PV+ + Q L TGSGK+T++P Sbjct: 207 VESMETTMRSPVFTDNSSPPAVPQSFQVAHLHAPTGSGKSTKVPAAYAAQGY-------K 259 Query: 188 VACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCS-SAKTILKYMTDGMLLREAM 246 V P A + ++ + +IR + + + Y T G L Sbjct: 260 VLVLNPSVAATLGFGAYMSKAHGIDP------NIRTGVRTITTGAPVTYSTYGKFL---- 309 Query: 247 NDPLLER--YGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYF 304 D Y +II DE H T + +G + + V++ +AT Sbjct: 310 ADGGCSGGAYDIIICDECHSTDSTTILGIGTVLDQAETAGARLVVLATATPPGS------ 363 Query: 305 DNCPLLTIPGRTHP--VEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDL-LLFLTGQEE 361 +T+P HP E+ + E + AI E G L+F +++ Sbjct: 364 -----VTVP---HPNIEEVALSNTGEIPFYGKAI-------PIEAIRGGRHLIFCHSKKK 408 Query: 362 IDEACKRIKREVDDLG--PEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVV 419 DE ++ + D+ +IP IG VVV Sbjct: 409 CDELAAKLSGLGINAVAYYRGLDVSVIP------------------------TIGDVVVV 444 Query: 420 STNIAETSLTID-------------GVVFVIDPGFAKQKVYNPRIRVES 455 +T+ T T D V F +DP F + P+ V Sbjct: 445 ATDALMTGYTGDFDSVIDCNTCVTQTVDFSLDPTFTIETTTVPQDAVSR 493 >2JLW-A nrPDB Length = 451 Score = 56.3 bits (134), Expect = 6e-08, Method: Composition-based stats. Identities = 65/338 (19%), Positives = 111/338 (32%), Gaps = 65/338 (19%) Query: 148 DILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGVACTQPRRVAAMSVAQRVAD 207 DI + + ++ G+GKT +I V + P RV VA Sbjct: 14 DIFRKKRLTIMDLHPGAGKTKRILPSIVREALK---RRLRTLILAPTRV--------VAA 62 Query: 208 EMDVMLGQEVGYSIRFED--CSSAKTI---LKYMTDGMLLREAMNDPLLERYGVIILDEA 262 EM+ L G IR++ S T + M ++ + Y +I++DEA Sbjct: 63 EMEEALR---GLPIRYQTPAVKSDHTGREIVDLMCHATFTTRLLSSTRVPNYNLIVMDEA 119 Query: 263 HERTLATDILMGVLKEVVRQRS--DLKVIVMSATLDAGKFQIYFDNCPLLTIPGRTHPVE 320 H + + + + I M+AT + P P+E Sbjct: 120 HFTD---PCSVAARGYISTRVEMGEAAAIFMTATPPGS----------IDPFPQSNSPIE 166 Query: 321 IFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRIKREVDDLGPEV 380 PER + + +G + F+ + ++ + G V Sbjct: 167 DIEREIPERSWN-------TGFDWITDYQGKTVWFVPSIKAGNDIANCL----RKSGKRV 215 Query: 381 GDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTIDGVVFVIDPG 440 + ++ F+ PK + VV+T+I+E VIDP Sbjct: 216 IQLS-------------RKTFDTEYPKTKLTDWD--FVVTTDISEMGANFRAGR-VIDP- 258 Query: 441 FAKQKVYNPRIRVESLLV---TAISKASAQQRAGRAGR 475 K E +++ ++ ASA QR GR GR Sbjct: 259 RRCLKPVILTDGPERVILAGPIPVTPASAAQRRGRIGR 296 >2DB3-A nrPDB Length = 434 Score = 55.1 bits (131), Expect = 1e-07, Method: Composition-based stats. Identities = 75/425 (17%), Positives = 146/425 (34%), Gaps = 68/425 (16%) Query: 109 TSLPQCINPFTNLPHTPRYYD-ILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKT 167 + +PQ I FT+ D + K ++P K ++ + + +TGSGKT Sbjct: 49 SDVPQPIQHFTSADLRDIIIDNVNKSGYKIPTPIQKCSI-PVISSGRDLMACAQTGSGKT 107 Query: 168 TQ--IP--QWCVEYMRSLPGPKRGVACTQPRRVAAMSV---AQRVADEMDVMLGQEVG-Y 219 +P +E L + V P R A+ + A++ A E + +G G Sbjct: 108 AAFLLPILSKLLEDPHELELGRPQVVIVSPTRELAIQIFNEARKFAFESYLKIGIVYGGT 167 Query: 220 SIRFED-CSSAKTILKYMTDGMLLREAMND-PLLERYGVIILDEAHER-TLATDILMGVL 276 S R ++ C + + T G LL E ++LDEA + M + Sbjct: 168 SFRHQNECITRGCHVVIATPGRLLDFVDRTFITFEDTRFVVLDEADRMLDMGFSEDMRRI 227 Query: 277 KEVVRQRSDLKVIVMSATLD------AGKFQIYFDNCPLLTIPGRTHPVEIFYTPEPERD 330 V R + + ++ SAT AG+F + + + G V+ Sbjct: 228 MTHVTMRPEHQTLMFSATFPEEIQRMAGEFLKNYVFVAIGIVGGACSDVKQTI------Y 281 Query: 331 YLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRIKREVDDLGPEVGDIKIIPLYS 390 + + I + E+ ++F+ + D + + + ++ Sbjct: 282 EVNKYAKRSKLIEILSEQADGTIVFVETKRGADFLASFLSEK---------EFPTTSIHG 332 Query: 391 TLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPR 450 Q+++ KV+++T++A L I + VI+ Y+ Sbjct: 333 DRLQSQREQALR------DFKNGSMKVLIATSVASRGLDIKNIKHVIN--------YDMP 378 Query: 451 IRVESLLVTAISKASAQQRAGRAGRTR-PGKCFRLYTEKAYKTEMQD---------NTYP 500 +++ + R GR GR G+ + + + D T P Sbjct: 379 SKIDDYV----------HRIGRTGRVGNNGRATSFFDPEKDRAIAADLVKILEGSGQTVP 428 Query: 501 EILRS 505 + LR+ Sbjct: 429 DFLRT 433 >1OYY-A nrPDB Length = 523 Score = 54.7 bits (130), Expect = 2e-07, Method: Composition-based stats. Identities = 66/349 (18%), Positives = 127/349 (36%), Gaps = 65/349 (18%) Query: 143 KDRFTDILVRHQSFVLVGETGSGKTT--QIPQWCVEYMRSLPGPKRGVACTQPRRVAAMS 200 ++ D ++ + ++V TG GK+ QIP + + + P + Q ++ A Sbjct: 30 QEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLTVVVSPLISLMKDQVDQLQANG 89 Query: 201 VA-------QRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLLER 253 VA Q +++VM G G IR + + M D L A +P+L Sbjct: 90 VAAACLNSTQTREQQLEVMTGCRTG-QIRLLYIAPER----LMLDNFLEHLAHWNPVL-- 142 Query: 254 YGVIILDEAHERT-LATDI--LMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFD----N 306 + +DEAH + D L ++ ++ L + ++AT D Q N Sbjct: 143 ---LAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALTATADDTTRQDIVRLLGLN 199 Query: 307 CPLLTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEAC 366 PL+ I P I Y + L+ +R ++ E+ +++ + ++++ Sbjct: 200 DPLIQISSFDRP-NIRYMLMEKFKPLDQLMR-----YVQEQRGKSGIIYCNSRAKVEDTA 253 Query: 367 KRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAET 426 R++ + I ++ L + + E ++VV+T Sbjct: 254 ARLQSKG---------ISAAAYHAGLENNVRADVQEK------FQRDDLQIVVATVAFGM 298 Query: 427 SLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGR 475 + V FV+ ++ +ES Q GRAGR Sbjct: 299 GINKPNVRFVV--------HFDIPRNIESYY----------QETGRAGR 329 >1YKS-A nrPDB Length = 440 Score = 50.5 bits (119), Expect = 3e-06, Method: Composition-based stats. Identities = 68/337 (20%), Positives = 112/337 (33%), Gaps = 66/337 (19%) Query: 149 ILVRHQSFVLVGETGSGKTTQ-IPQWCVEYMRSLPGPKRGVACTQPRRVAAMSVAQRVAD 207 +L + + VL G+GKT + +PQ E R + P RV +++ Sbjct: 4 MLKKGMTTVLDFHPGAGKTRRFLPQILAECAR----RRLRTLVLAPTRVV-------LSE 52 Query: 208 EMDVMLGQEVGYSIR-FEDCSSAKTILKYMTDGMLLREAMNDPLLERYGVIILDEAHERT 266 + G +V + + F S + ++ M L + + + VII+DEAH Sbjct: 53 MKEAFHGLDVKFHTQAFSAHGSGREVIDAMCHATLTYRMLEPTRVVNWEVIIMDEAHFLD 112 Query: 267 LATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPE 326 A+ G R I+M+AT D P G V+ E Sbjct: 113 PASIAARGWAAHRARANES-ATILMTATPPGTS-----DEFP--HSNGEIEDVQTDIPSE 164 Query: 327 P---ERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRIKREVDDLGPEVGDI 383 P D++ A R FL A + + G V + Sbjct: 165 PWNTGHDWILADKRPTAW-------------FLPS----IRAANVMAASLRKAGKSVVVL 207 Query: 384 KIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAK 443 ++ FE P + +++T+IAE + ++ Sbjct: 208 -------------NRKTFEREYPTIKQKKPD--FILATDIAEMGANL-----CVERVLDC 247 Query: 444 QKVYNPRIRVESLLVT-----AISKASAQQRAGRAGR 475 + + P + E V IS +SA QR GR GR Sbjct: 248 RTAFKPVLVDEGRKVAIKGPLRISASSAAQRRGRIGR 284 >3FHO-A nrPDB Length = 508 Score = 49.0 bits (115), Expect = 8e-06, Method: Composition-based stats. Identities = 57/358 (15%), Positives = 112/358 (31%), Gaps = 44/358 (12%) Query: 161 ETGSGKTTQIPQWCVEYMRSLPGPKRGVACTQPRRVAAMSVAQRVADEMDVMLGQEVGYS 220 ++G+GKT + + + PK C P R A + V EM + + Sbjct: 166 QSGTGKTAAFALTMLSRVDASV-PKPQAICLAPSRELARQIMD-VVTEMGKYTEVKTAFG 223 Query: 221 IRFEDCSSAK--TILKYMTDGMLLREAMN-DPLLERYGVIILDEAHERTLATDILMGVLK 277 I+ AK + T G ++ V +LDEA + ++ Sbjct: 224 IKDSVPKGAKIDAQIVIGTPGTVMDLMKRRQLDARDIKVFVLDEADNMLDQQGLGDQSMR 283 Query: 278 EVVRQRSDLKVIVMSATLD------AGKFQIYFDNCPLLTIPGRTHPVEIFYTPEPERDY 331 + ++++ SAT A +F + L T ++ Y ++ Sbjct: 284 IKHLLPRNTQIVLFSATFSERVEKYAERFAPNANEIRLKTEELSVEGIKQLYMDCQSEEH 343 Query: 332 LEAAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRIKREVDDLGPEVGDIKIIPLYST 391 + + + G ++F ++ +E +R+ + + L Sbjct: 344 KYNVLVELYGLLTI----GQSIIFCKKKDTAEEIARRMTADGH---------TVACLTGN 390 Query: 392 LPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTIDGVVFVI--DPGFAKQKVYNP 449 L Q+ I + KV+V+TN+ + + V V+ D + +P Sbjct: 391 LEGAQRDAIMD------SFRVGTSKVLVTTNVIARGIDVSQVNLVVNYDMPLDQAGRPDP 444 Query: 450 RIRVESLLVTAISKASAQQRAGRAGRTRPGKCF-RLYTEKAYKTEMQDNTYPEILRSN 506 + + + R GR GR F +Q+ I R Sbjct: 445 QTYLHRI-----------GRTGRFGRVGVSINFVHDKKSWEEMNAIQEYFQRPITRVP 491 >5WDX-A nrPDB Length = 649 Score = 49.0 bits (115), Expect = 8e-06, Method: Composition-based stats. Identities = 57/310 (18%), Positives = 96/310 (30%), Gaps = 51/310 (16%) Query: 151 VRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGVACTQPRRVAAMSVAQRVADEMD 210 +Q L TGSGK+T++P V P A + ++ Sbjct: 213 QTYQVGYLHAPTGSGKSTKVPVAYAAQGY-------KVLVLNPSVAATLGFGAYLSKAHG 265 Query: 211 VMLGQEVGYSIRFEDCS-SAKTILKYMTDGMLLREAMNDPLLERYGVIILDEAHERTLAT 269 + +IR + + Y T G L + Y +II DE H + Sbjct: 266 INP------NIRTGVRTVMTGEAITYSTYGKFLADGGCASG--AYDIIICDECHAVDATS 317 Query: 270 DILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCPLLTIPGRTHP--VEIFYTPEP 327 + +G + + ++ +AT +T P HP E+ E Sbjct: 318 ILGIGTVLDQAETAGVRLTVLATATPPGS-----------VTTP---HPDIEEVGLGREG 363 Query: 328 ERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRIKREVDDLG--PEVGDIKI 385 E + AI + + G L+F +++ DE ++ + D+ I Sbjct: 364 EIPFYGRAI------PLSCIKGGRHLIFCHSKKKCDELAAALRGMGLNAVAYYRGLDVSI 417 Query: 386 IPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQK 445 IP Q + V+ N+A T V F +DP F Sbjct: 418 IP-------AQGDVVVVATDALMTGYTGDFDSVIDCNVAVT----QAVDFSLDPTFTITT 466 Query: 446 VYNPRIRVES 455 P+ V Sbjct: 467 QTVPQDAVSR 476 >5IVL-B nrPDB Length = 429 Score = 49.0 bits (115), Expect = 9e-06, Method: Composition-based stats. Identities = 76/416 (18%), Positives = 145/416 (34%), Gaps = 72/416 (17%) Query: 152 RHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGVACTQPRRVAAMSVAQ-------- 203 +++ + +TG+GKT VE + G P R A+ V++ Sbjct: 38 QNKDVIGQAQTGTGKTAAFGIPIVEKVDVKNGA-IQALVVAPTRELAIQVSEELYKIGAV 96 Query: 204 -RVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPL-LERYGVIILDE 261 RV + + GQ++ IR I+ T G ++ L LE ++LDE Sbjct: 97 KRVR-VLPIYGGQDIERQIRAL-KKHPHVIVG--TPGRIIDHINRGTLRLEHVHTVVLDE 152 Query: 262 AHERTLATDILMGVLKE---VVRQRS-DLKVIVMSATLDA--GKFQIYFDNCPLLTIPGR 315 A E + MG +++ ++ + + ++ SAT+ + F N P L Sbjct: 153 ADEM-----LNMGFIEDIEAILSHVPAERQTLLFSATMPDPIRRIAERFMNEPEL----V 203 Query: 316 THPVEIFYTPEPERDYLEAAIRTVIQIHM----CEEEEGDLLLFLTGQEEIDEACKRIKR 371 + P ++ YLE + I + E + +F + +DE + + Sbjct: 204 KVKAKEMTVPNIQQYYLEVHEKKKFDILTRLLDIQAPELAI-VFGRTKRRVDELAEALNL 262 Query: 372 EVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTID 431 ++ L ++ + ++V+T++A L I Sbjct: 263 RGY---------AAEGIHGDLSQAKRLSVLRKFKEGAIE------ILVATDVAARGLDIS 307 Query: 432 GVVFVIDPGFAKQ-KVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAY 490 GV V + + + Y RI R GRAG+T F E Sbjct: 308 GVTHVYNFDIPQDPESYVHRIG----------------RTGRAGKTGVAMTFVTPREIGQ 351 Query: 491 KTEMQDNTYPEILRSN---LGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELL 543 ++ T ++ R L + +++ I+ L++ ++ RA E L Sbjct: 352 LHHIERTTKRKMERMKPPTLDEALEGQQRIAIEKLLN--VVETENLSFYKRAAEEL 405 >3EIQ-A nrPDB Length = 414 Score = 48.2 bits (113), Expect = 1e-05, Method: Composition-based stats. Identities = 45/319 (14%), Positives = 113/319 (35%), Gaps = 45/319 (14%) Query: 138 PVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGVACTQPRRVA 197 P + + + + ++G+GKT ++ + P R Sbjct: 63 PSAIQQRAILPCIKGYDV-IAQAQSGTGKTATFAISILQQIELDL-KATQALVLAPTREL 120 Query: 198 AMSVAQRVADEMDVMLGQEV-----GYSIRFE--DCSSAKTILKYMTDGMLLREAMNDPL 250 A + Q+V + +G G ++R E + T G + L Sbjct: 121 AQQI-QKVVMALGDYMGASCHACIGGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYL 179 Query: 251 LERY-GVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQ--IYFDNC 307 +Y + +LDEA E L+ + + S+ +V+++SAT+ + + F Sbjct: 180 SPKYIKMFVLDEADE-MLSRGFKDQIYDIFQKLNSNTQVVLLSATMPSDVLEVTKKFMRD 238 Query: 308 PL--------LTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQ 359 P+ LT+ G + FY ++ + + + + ++F+ + Sbjct: 239 PIRILVKKEELTLEG----IRQFYINVEREEWKLDTLCDLYETLTITQA----VIFINTR 290 Query: 360 EEIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVV 419 ++D +++ D + ++ + +++ I + + +V++ Sbjct: 291 RKVDWLTEKMHAR---------DFTVSAMHGDMDQKERDVIMR------EFRSGSSRVLI 335 Query: 420 STNIAETSLTIDGVVFVID 438 +T++ + + V VI+ Sbjct: 336 TTDLLARGIDVQQVSLVIN 354 >4NHO-A nrPDB Length = 488 Score = 47.4 bits (111), Expect = 2e-05, Method: Composition-based stats. Identities = 83/450 (18%), Positives = 153/450 (34%), Gaps = 96/450 (21%) Query: 111 LPQCINPFTNLPHTPRYYDILKK---RLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKT 167 +P I + + P +++ K + P+ I ++++ + V ETGSGKT Sbjct: 54 IPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQA---IPIGLQNRDIIGVAETGSGKT 110 Query: 168 TQIPQWCVEYMRSLPGPKR--------GVACTQPRRVAAMSVAQ-----------RVADE 208 + ++ +LP R P R A + + R Sbjct: 111 AAFLIPLLVWITTLPKIDRIEESDQGPYAIILAPTRELAQQIEEETIKFGKPLGIRTVAV 170 Query: 209 MDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPL-LERYGVIILDEAHERTL 267 + + ++ G+ +R + T G L+ N L L R ++LDEA Sbjct: 171 IGGISREDQGFRLRMG------CEIVIATPGRLIDVLENRYLVLSRCTYVVLDEADRM-- 222 Query: 268 ATDILMGVLKEVVRQRSDLKVI-------------VMSATLDAGKFQIYFDNCPLLTIPG 314 I MG +V + + V M A ++GK + T+P Sbjct: 223 ---IDMGFEPDVQKILEHMPVSNQKPDTDEAEDPEKMLANFESGKHKYRQTVMFTATMPP 279 Query: 315 RTHPVEIFYTPEPERDYLEAAIRTVIQIH-----MCEEEEGDLLLFLTGQE--------- 360 + Y P Y+ +A + ++ M E E+ LL + Q Sbjct: 280 AVERLARSYLRRPAVVYIGSAGKPHERVEQKVFLMSESEKRKKLLAILEQGFDPPIIIFV 339 Query: 361 EIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVS 420 + C + + ++ +G L+ +Q++ A + ++V+ Sbjct: 340 NQKKGCDVLAKSLEKMGYNA-----CTLHGGKGQEQREFALS------NLKAGAKDILVA 388 Query: 421 TNIAETSLTIDGVVFVIDPGFAKQ-KVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPG 479 T++A + I V V++ AK + Y RI R GRAG++ Sbjct: 389 TDVAGRGIDIQDVSMVVNYDMAKNIEDYIHRIG----------------RTGRAGKSGVA 432 Query: 480 KCFRLYTEKAYKTEMQDNTYPEILRSNLGS 509 F + A E++ IL S + S Sbjct: 433 ITFLTKEDSAVFYELKQA----ILESPVSS 458 >5AGA-A nrPDB Length = 830 Score = 47.4 bits (111), Expect = 2e-05, Method: Composition-based stats. Identities = 59/413 (14%), Positives = 142/413 (34%), Gaps = 91/413 (22%) Query: 135 LQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGVA----C 190 ++ W+ + ++ ++ V T +GKT ++ + + + Sbjct: 26 KKMFEWQAECLLLGQVLEGKNLVYSAPTSAGKTLVAELLILKRVLEMRKKALFILPFVSV 85 Query: 191 TQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPL 250 + ++ S+ Q V ++D +G S F A ++ +G++ R + + Sbjct: 86 AKEKKYYLQSLFQEVGIKVDGYMG-STSPSRHFSSLDIAVCTIERA-NGLINR-LIEENK 142 Query: 251 LERYGVIILDEAH-----ERTLATDILMGVLKEVVRQRSD------------LKVIVMSA 293 ++ G++++DE H R ++L+ + + R+ + ++++ MSA Sbjct: 143 MDLLGMVVVDELHMLGDSHRGYLLELLLTKICYITRKSASCQADLASSLSNAVQIVGMSA 202 Query: 294 TLDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGD-- 351 TL + + N L R PV + + + +++++ V + + +GD Sbjct: 203 TLPNLELVASWLNAELYHTDFR--PVPLLESVKVGNSIYDSSMKLVREFEPMLQVKGDED 260 Query: 352 ---------------LLLFLTGQEEIDEACKRIKREVDDL---------GPEVGDIKIIP 387 +LLF ++ ++ I RE +L E + + Sbjct: 261 HVVSLCYETICDNHSVLLFCPSKKWCEKLADIIAREFYNLHHQAEGLVKPSECPPVILEQ 320 Query: 388 ------------LYSTLPPQQQQRI-------------FEPPPPKKQNGAIGRKVVVSTN 422 L S L Q+ + E + +V+ +T+ Sbjct: 321 KELLEVMDQLRRLPSGLDSVLQKTVPWGVAFHHAGLTFEERDIIEGAFRQGLIRVLAATS 380 Query: 423 IAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGR 475 + + + +I + ++ R + + +Q GRAGR Sbjct: 381 TLSSGVNLPARRVII-----RTPIFGGR---------PLDILTYKQMVGRAGR 419 >2VA8-A nrPDB Length = 715 Score = 47.4 bits (111), Expect = 3e-05, Method: Composition-based stats. Identities = 83/504 (16%), Positives = 164/504 (32%), Gaps = 87/504 (17%) Query: 117 PFTNLPHTPRYYDILKKRLQLPVWEYKDRFTDI-LVRHQSFVLVGETGSGKTTQIPQWCV 175 P +L +I+KKR + + L+ +L TGSGKT + Sbjct: 9 PIEDLKLPSNVIEIIKKRGIKKLNPPQTEAVKKGLLEGNRLLLTSPTGSGKTLIAEMGII 68 Query: 176 EYMRSLPGPKRGVACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILK- 234 ++ G + + T P R A++ + + + ++G +V + D + LK Sbjct: 69 SFLLKNGG--KAIYVT-PLR--ALTNEKYLTFKDWELIGFKVA--MTSGDYDTDDAWLKN 121 Query: 235 ----YMTDGMLLREAMNDPL-LERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVI 289 T L + P L +LDE H L V++ V + ++ Sbjct: 122 YDIIITTYEKLDSLWRHRPEWLNEVNYFVLDELH--YLNDPERGPVVESVTIRAKRRNLL 179 Query: 290 VMSATLDAGKFQIYFDNCPLLTIPGRTHP-VEIFYTPEPERDYLEAAIR----------T 338 +SAT+ K + + R P +E PE ++ + Sbjct: 180 ALSATISNYKQIAKWLGAEPVATNWRPVPLIEGVIYPERKKKEYNVIFKDNTTKKVHGDD 239 Query: 339 VIQIHMCEEEE--GDLLLFLTGQEEIDEACKRI-------KREVDDLGPEVGDIKIIPLY 389 I + + G +L+F ++ + +I + + L + + I Sbjct: 240 AIIAYTLDSLSKNGQVLVFRNSRKMAESTALKIANYMNFVSLDENALSEILKQLDDIEEG 299 Query: 390 STLPPQQQQRIFEPPPPKKQNGAIGR--------------KVVVSTNIAETSLTIDGVVF 435 + + + + G KV+V+T + + Sbjct: 300 GSDEKELLKSLISKGVAYHHAGLSKALRDLIEEGFRQRKIKVIVATPTLAAGVNLPARTV 359 Query: 436 VIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQ 495 +I +Y ++ I +Q +GRAGR PG Sbjct: 360 IIG------DIYRFNKKIAGYYDE-IPIMEYKQMSGRAGR--PG---------------- 394 Query: 496 DNTYPEILRSNLGSVVLQLKKLGIDDLV-HFDFMDPPAPETLMRALELLNY--LAALNDD 552 + +I S+V+ K +D + + D E+ + + L L+ + Sbjct: 395 ---FDQIG----ESIVVVRDKEDVDRVFKKYVLSDVEPIESKLGSERAFYTFLLGILSAE 447 Query: 553 GDLTELGSMMAEFPLDPQLAKMVI 576 G+L+E + F + LAK ++ Sbjct: 448 GNLSE--KQLENFAYESLLAKQLV 469 >2WWY-A nrPDB Length = 591 Score = 47.0 bits (110), Expect = 3e-05, Method: Composition-based stats. Identities = 68/382 (17%), Positives = 131/382 (34%), Gaps = 71/382 (18%) Query: 117 PFTNLPHTPRYYDILKKRLQLPVWE-YKDRFTDILVRHQSFVLVGETGSGKTT--QIPQW 173 P++ + DIL+ +L + + ++ + + LV TG GK+ Q+P Sbjct: 27 PWSG-----KVKDILQNVFKLEKFRPLQLETINVTMAGKEVFLVMPTGGGKSLCYQLPAL 81 Query: 174 CVEYMRSLPGP-----KRGVACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSS 228 C + + P + + + ++A + + E + E+ + E Sbjct: 82 CSDGFTLVICPLISLMEDQLMVLKQLGISATMLNASSSKEHVKWVHAEM-VNKNSELKLI 140 Query: 229 AKTILKYMTDGMLLREAMNDPLLERYGVIILDEAH-----ERTLATDI-LMGVLKEVVRQ 282 T K M + R+ I +DE H D +G+LK RQ Sbjct: 141 YVTPEKIAKSKMFMSRLEKAYEARRFTRIAVDEVHCCSQWGHDFRPDYKALGILK---RQ 197 Query: 283 RSDLKVIVMSAT------LDAGKF---QIYFDNCPLLTIPGRTHPVEIFYTPEPERDYLE 333 + +I ++AT DA K + F P + E+ P D++E Sbjct: 198 FPNASLIGLTATATNHVLTDAQKILCIEKCFTFTASFNRPNLYY--EVRQKPSNTEDFIE 255 Query: 334 AAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRIKREVDDLGPEVGDIKIIPLYSTLP 393 ++ + + + + G + F Q++ ++ ++ G ++ L Sbjct: 256 DIVKLINGRY--KGQSGIIYCF--SQKDSEQVTVSLQNLGIHAGA---------YHANLE 302 Query: 394 PQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRV 453 P+ + + A +VVV+T + V FVI +K Sbjct: 303 PEDKTTVHRK------WSANEIQVVVATVAFGMGIDKPDVRFVIHHSMSK---------- 346 Query: 454 ESLLVTAISKASAQQRAGRAGR 475 S + Q +GRAGR Sbjct: 347 --------SMENYYQESGRAGR 360 >1GM5-A nrPDB Length = 780 Score = 46.7 bits (109), Expect = 4e-05, Method: Composition-based stats. Identities = 56/333 (16%), Positives = 118/333 (35%), Gaps = 56/333 (16%) Query: 157 VLVGETGSGKTTQIPQWCVEYMRSLPGPKRGVACTQPRRVAAMSVAQRVAD---EMDVML 213 +L G+ GSGKT ++ + V P + A+ +R + + ++ + Sbjct: 393 LLQGDVGSGKTVVAQLAILDNYEAGFQTAFMV----PTSILAIQHYRRTVESFSKFNIHV 448 Query: 214 GQEVGYSIRFEDCSSAKTILKYMTDGMLL---REAMNDPLLERYGVIILDEAHERTLATD 270 +G + E K+ L+ +++ D + G++I+DE H + Sbjct: 449 ALLIGATTPSE-KEKIKSGLRNGQIDVVIGTHALIQEDVHFKNLGLVIIDEQHRFGVKQR 507 Query: 271 ILMGVLKEVVRQRSDLKVIVMSAT-LDAGKFQIYFDNCPLLTI----PGRTHPVEIFYTP 325 + ++V +VMSAT + ++ + + I PGR + Sbjct: 508 EALMNKGKMVD------TLVMSATPIPRSMALAFYGDLDVTVIDEMPPGRKEVQTMLVPM 561 Query: 326 EPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRIKREVDDLGPE--VGDI 383 + + E + V++ G + EE D+ + E+ + + + Sbjct: 562 DRVNEVYEFVRQEVMR-------GGQAFIVYPLIEESDKLNVKSAVEMYEYLSKEVFPEF 614 Query: 384 KIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRK-VVVSTNIAETSLTIDGVVFVIDPGFA 442 K+ ++ L +++ R+ A GR ++VST + E + + ++ Sbjct: 615 KLGLMHGRLSQEEKDRV-------MLEFAEGRYDILVSTTVIEVGIDVPRANVMV----- 662 Query: 443 KQKVYNPRIRVESLLVTAISKASAQQRAGRAGR 475 + NP A Q GR GR Sbjct: 663 ---IENPE---------RFGLAQLHQLRGRVGR 683 >5V9X-A nrPDB Length = 877 Score = 46.3 bits (108), Expect = 5e-05, Method: Composition-based stats. Identities = 50/397 (12%), Positives = 114/397 (28%), Gaps = 87/397 (21%) Query: 138 PVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVE---YMRSLPGPKRGVACTQPR 194 P D + + + +++ TGSGKT W ++ P V P Sbjct: 48 PTPAQADAW-SAISEGNNTLVIAPTGSGKTLAAFLWAIDRLADPAREPSQGTQVLYVSPL 106 Query: 195 RVAAMSVAQ----------RVADEMDVMLGQEVGYSIRFEDCS----------SAKTILK 234 + A+ V + RVA+ + + +R D ++ Sbjct: 107 KALAVDVERNLRTPLTGITRVAERHG-LPAPSITVGVRSGDTPPNQRRAMIANPPDVLIT 165 Query: 235 YMTDGMLLREAMNDPLLERYGVIILDEAH-----ERTLATDILMGVLKEVVRQRSDLKVI 289 L+ + L +I+DE H +R + + L +++ ++ Sbjct: 166 TPESLFLMLTSAARETLTSVRTVIVDEVHAVAATKRGAHLALSLERLDQLLD-TPAQRIG 224 Query: 290 VMSATLDAGKFQIYF-DNCPLLTI---PGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMC 345 + + + + P + +T + + + +I ++ + Sbjct: 225 LSATVRPPEEVARFLSGQAPTTIVCPPAAKTFDLSVQVPVPDMANLDNNSIWPDVEERIV 284 Query: 346 E--EEEGDLLLFLTGQEEIDEACKRIKRE--------------------------VDDLG 377 + E ++F + + R+ Sbjct: 285 DLVEAHNSSIVFANSRRLAERLTSRLNEIHAERSGIELPAGPNPEVGGGAPAHLMGSGQA 344 Query: 378 PEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTIDGVVFVI 437 + + ++ +Q+ ++ + + + VV+T+ E + + V VI Sbjct: 345 NGAPPLLARAHHGSVSKEQRAQV------EDDLKSGRLRAVVATSSLELGIDMGAVDLVI 398 Query: 438 DPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAG 474 + S AS QR GRAG Sbjct: 399 Q------------------VEAPPSVASGLQRVGRAG 417 >6B4I-E nrPDB Length = 430 Score = 45.9 bits (107), Expect = 8e-05, Method: Composition-based stats. Identities = 58/342 (16%), Positives = 116/342 (33%), Gaps = 61/342 (17%) Query: 154 QSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGVACTQPRRVAAMSVAQRVADEMDVML 213 Q+ + ++G+GKT + + C P A+ + + Sbjct: 83 QNLIAQSQSGTGKTAAFVLAMLSQVEPA-NKYPQCLCLSPTYELALQTGKVIEQMGKFYP 141 Query: 214 GQEVGYSIRFEDCSSAKTI---LKYMTDGMLLREAMN----DPLLERYGVIILDEAHERT 266 ++ Y++R + I + T G +L DP + V +LDEA Sbjct: 142 ELKLAYAVRGNKLERGQKISEQIVIGTPGTVLDWCSKLKFIDPK--KIKVFVLDEA---- 195 Query: 267 LATDILMGVLK------EVVRQRS-DLKVIVMSATLDAG--KFQIYFDNCPLLTIPGRTH 317 D+++ + R + ++++ SAT + KF P + R Sbjct: 196 ---DVMIATQGHQDQSIRIQRMLPRNCQMLLFSATFEDSVWKFAQKVVPDPNVIKLKREE 252 Query: 318 ----PVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRIKREV 373 ++ +Y RD A+ + + ++F ++ + +E Sbjct: 253 ETLDTIKQYYVLCSSRDEKFQALCNLYGAITIAQA----MIFCHTRKTASWLAAELSKEG 308 Query: 374 DDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTIDGV 433 + G++ + +Q+ + E K+ KV+V+TN+ + ++ V Sbjct: 309 HQVALLSGEMMV---------EQRAAVIERFREGKE------KVLVTTNVCARGIDVEQV 353 Query: 434 VFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGR 475 VI+ K NP E+ L R GR GR Sbjct: 354 SVVINFDLPVDKDGNPDN--ETYL----------HRIGRTGR 383 >5ZWN-y nrPDB Length = 588 Score = 45.1 bits (105), Expect = 1e-04, Method: Composition-based stats. Identities = 98/525 (18%), Positives = 184/525 (35%), Gaps = 77/525 (14%) Query: 2 SKRHRLDLGED--YPSGKKRAGTDGK---DRDRDRDREDRSKDRDRERDRGDREREREKE 56 SK+ RL E+ P+ A + K RD E K R+ + G + E Sbjct: 40 SKQERLKENEESLTPTQSDSAKVEIKKVNSRDDSFFNETNDKKRNPSKQNGSKFHFSWNE 99 Query: 57 KEKELRA-----STNAM-LISAGLPPLKASHSA----HSTHSAHSTHSTHSAHSTHAGHA 106 E L ST A+ L+ G P A+ S+ H T + + +A Sbjct: 100 SEDTLSGYDPIVSTRAIDLLWKGKTPKNAAESSYMGKHWTEKSLHEMNERDWRILKEDYA 159 Query: 107 GHTSLPQCINP---FTNLPHTPR---YYDILKKRLQLPVWEYKDRFTDI--LVRHQSFVL 158 T NP + L PR I + R P + ++ + +++ F+ Sbjct: 160 IVTKGGTVENPLRNWEELNIIPRDLLRVIIQELRFPSPTPIQRITIPNVCNMKQYRDFLG 219 Query: 159 VGETGSGKTTQIPQWCVEYMRSLPGP--------KRGVACTQPRRVAAMSVAQRVADEMD 210 V TGSGKT + M P P R + Q+ ++ Sbjct: 220 VASTGSGKTLAFVIPILIKMSRSPPRPPSLKIIDGPKALILAPTRELVQQI-QKETQKVT 278 Query: 211 VMLGQEVGYSIRFEDCSSAKTI------------LKYMTDGMLLREAMNDPL-LERYGVI 257 + +E Y + ++ + T G L+ N L +++ + Sbjct: 279 KIWSKESNYDCKVISIVGGHSLEEISFSLSEGCDILVATPGRLIDSLENHLLVMKQVETL 338 Query: 258 ILDEAHE------RTLATDILMGVLKEVVRQRSDLKVIVM-SATLDA--GKFQIYFDNCP 308 +LDEA + T+IL V ++ + + +M +AT+ K + P Sbjct: 339 VLDEADKMIDLGFEDQVTNILTKV--DINADSAVNRQTLMFTATMTPVIEKIAAGYMQKP 396 Query: 309 LLTIPGRTHPVEIFYTPEPE-RDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACK 367 + G E E D E + + I + +++F+ ++ D + Sbjct: 397 VYATIGVETGSEPLIQQVVEYADNDEDKFKKLKPIVAKYDPP--IIIFINYKQTADWLAE 454 Query: 368 RIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETS 427 + ++E ++K+ L+ + +Q++ + +++++TN+A Sbjct: 455 KFQKET--------NMKVTILHGSKSQEQREHSLQ------LFRTNKVQIMIATNVAARG 500 Query: 428 LTIDGVVFVIDPGFAKQ-KVYNPRIRVESLLV---TAISKASAQQ 468 L I V V++ +K+ Y RI TA+S SA + Sbjct: 501 LDIPNVSLVVNFQISKKMDDYIHRIGRTGRAANEGTAVSFVSAAE 545 >6CRM-A nrPDB Length = 541 Score = 45.1 bits (105), Expect = 1e-04, Method: Composition-based stats. Identities = 53/339 (15%), Positives = 120/339 (35%), Gaps = 51/339 (15%) Query: 146 FTDILVRHQSFVLVGETGSGKTT--QIPQWCVEYMRSLPGPKRGVACTQPRRVAAMSVAQ 203 D ++ + ++V TG GK+ QIP + + P + Q ++ A VA Sbjct: 53 IIDAVLEGRDCLVVMPTGGGKSLCYQIPALVKTGLTIVVSPLISLMKDQVDQLLANGVA- 111 Query: 204 RVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLLERYGVIILDEAH 263 A ++ +E ++ + +L + +++ ++ ++ +DEAH Sbjct: 112 --AACLNSTQSREEQQAVLAGCRTGQVRLLYIAPERLMMDNFIDTLGYWDLAMVAVDEAH 169 Query: 264 ERT-LATDI--LMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFD----NCPLLTIPGRT 316 + D L ++ + + + ++AT D + + PL+ I Sbjct: 170 CISQWGHDFRPEYAALGQLRARFPAVPFMALTATADDTTRRDIVRLLGLDDPLIEISSFD 229 Query: 317 HPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRIKREVDDL 376 P I Y + L+ +R ++ E+ +++ + ++++ R++ Sbjct: 230 RP-NIRYMLMEKFKPLDQLMR-----YVQEQRGKSGIIYCNSRAKVEDTAARLQSRG--- 280 Query: 377 GPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTIDGVVFV 436 I ++ L + + + E ++VV+T + V FV Sbjct: 281 ------ISAAAYHAGLEHEVRASVQEK------FQRDDLQIVVATVAFGMGINKPNVRFV 328 Query: 437 IDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGR 475 + ++ +ES Q GRAGR Sbjct: 329 V--------HFDIPRNIESYY----------QETGRAGR 349 >6CZ5-A nrPDB Length = 480 Score = 44.3 bits (103), Expect = 2e-04, Method: Composition-based stats. Identities = 54/381 (14%), Positives = 113/381 (29%), Gaps = 70/381 (18%) Query: 128 YDILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSL------ 181 ++ + PV ++ I+ + + +TG GKT + + S Sbjct: 68 IELTRYTRPTPVQKHA---IPIIKEKRDLMACAQTGCGKTAAFLLPILSQIYSDGPGEAL 124 Query: 182 --------PGPKRGV---ACTQPRRVAAMSVAQ------RVADEMDVML--GQEVGYSIR 222 G ++ P R A+ + + + ++ G ++G IR Sbjct: 125 RAMKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGADIGQQIR 184 Query: 223 FEDCSSAKTILKYMTDGMLLREAMNDP-LLERYGVIILDEAH---ERTLATDILMGVLKE 278 L T G L+ L+ ++LDEA + I V ++ Sbjct: 185 ---DLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQD 241 Query: 279 VVRQRSDLKVIVMSATLDAG--KFQIYFDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAI 336 + + ++ SAT F + + GR T + Sbjct: 242 TMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEESDKR 301 Query: 337 RTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQ 396 ++ + ++ L+F+ ++ D + E ++ + Sbjct: 302 SFLLDLLNATGKDSLTLVFVETKKGADSLEDFLYHEGY---------ACTSIHGDRSQRD 352 Query: 397 QQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESL 456 ++ K ++V+T +A L I V VI+ ++ +E Sbjct: 353 REEALHQFRSGKSP------ILVATAVAARGLDISNVKHVIN--------FDLPSDIEEY 398 Query: 457 LVTAISKASAQQRAGRAGRTR 477 + R GR GR Sbjct: 399 V----------HRIGRTGRVG 409 >3PEW-A nrPDB Length = 395 Score = 44.3 bits (103), Expect = 2e-04, Method: Composition-based stats. Identities = 65/350 (18%), Positives = 119/350 (34%), Gaps = 67/350 (19%) Query: 156 FVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGVACTQPRRVAAMSVAQRVADEMD--VML 213 + ++G+GKT + + + + C P R A + V EM + Sbjct: 47 MIAQSQSGTGKTAAFSLTMLTRVNPEDASPQAI-CLAPSRELARQTLE-VVQEMGKFTKI 104 Query: 214 GQEVGYSIRFEDCSSAKTILKYMTDGMLL----REAMNDPLLERYGVIILDEAHERTLAT 269 ++ FE + T G +L R+ M L++ + +LDEA + L Sbjct: 105 TSQLIVPDSFEKNKQINAQVIVGTPGTVLDLMRRKLM---QLQKIKIFVLDEA-DNMLDQ 160 Query: 270 DILMGVLKEVVRQRS-DLKVIVMSATLD------AGKFQIYFDNCPLLTIPGRTHPVEIF 322 L V R D ++++ SAT A K + L T ++ Sbjct: 161 QGLGDQCIRVKRFLPKDTQLVLFSATFADAVRQYAKKIVPNANTLELQTNEVNVDAIKQL 220 Query: 323 YTP---EPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRIKREVDDLGPE 379 Y E ++ + + V+ I G ++F+ ++ + ++K E + Sbjct: 221 YMDCKNEADKFDVLTELYGVMTI-------GSSIIFVATKKTANVLYGKLKSEGHE---- 269 Query: 380 VGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTIDGVVFVID- 438 + L+ L Q++ R+ + KV+++TN+ + I V V++ Sbjct: 270 -----VSILHGDLQTQERDRLID------DFREGRSKVLITTNVLARGIDIPTVSMVVNY 318 Query: 439 ------PGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCF 482 G A Y RI R GR GR F Sbjct: 319 DLPTLANGQADPATYIHRIG----------------RTGRFGRKGVAISF 352 >3FE2-A nrPDB Length = 242 Score = 44.3 bits (103), Expect = 2e-04, Method: Composition-based stats. Identities = 41/157 (26%), Positives = 57/157 (36%), Gaps = 19/157 (12%) Query: 156 FVLVGETGSGKTTQIPQWCVEYMRSLPGPKRG----VACTQPRRVAAMSVAQRVADE--M 209 V V +TGSGKT + ++ P +RG P R A V Q+VA E Sbjct: 69 MVGVAQTGSGKTLSYLLPAIVHINHQPFLERGDGPICLVLAPTRELAQQV-QQVAAEYCR 127 Query: 210 DVMLGQEVGY-------SIRFEDCSSAKTILKYMTDGMLLREAM-NDPLLERYGVIILDE 261 L Y IR + T G L+ L R ++LDE Sbjct: 128 ACRLKSTCIYGGAPKGPQIR---DLERGVEICIATPGRLIDFLECGKTNLRRTTYLVLDE 184 Query: 262 AHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAG 298 A +R L + K V + R D + ++ SAT Sbjct: 185 A-DRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKE 220 >4CDG-A nrPDB Length = 673 Score = 44.3 bits (103), Expect = 2e-04, Method: Composition-based stats. Identities = 53/390 (13%), Positives = 125/390 (32%), Gaps = 70/390 (17%) Query: 122 PHTPRYYDILKKRLQLPVWEYKDRFTDILVRHQSFV-----LVGETGSGKTT--QIPQWC 174 PHT I + + ++ + + + + + ++ TG GK+ Q+P Sbjct: 17 PHTKEMMKI--FHKKFGLHNFRTNQLEAI--NAALLGEDCFILMPTGGGKSLCYQLPACV 72 Query: 175 VEYMRSLPGPKRGVACTQPRRVAAMSV-AQRVADEMDVMLGQEVGYSIRFEDCSSAKTIL 233 + + P R + Q +++ ++ + A + + + + L Sbjct: 73 SPGVTVVISPLRSLIVDQVQKLTSLDIPATYLTGDKTDSEATNIYLQL---SKKDPIIKL 129 Query: 234 KYMT------DGMLLREAMNDPLLERYGVIILDEAH-----ERTLATDILMGVLKEVVRQ 282 Y+T L+ N + ++DEAH D + + ++ Sbjct: 130 LYVTPEKICASNRLISTLENLYERKLLARFVIDEAHCVSQWGHDFRQDYKR--MNMLRQK 187 Query: 283 RSDLKVIVMSATLDAGKFQIYFDNCPL-----LTIPGRTHPVEIFYTPEPERDYLEAAIR 337 + V+ ++AT + + + ++ H ++ + P+ + + Sbjct: 188 FPSVPVMALTATANPRVQKDILTQLKILRPQVFSMSFNRHNLKYYVLPKKPKKVAFDCLE 247 Query: 338 TVIQIHMCEEEEGDLLLFLTGQEEIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQ 397 + + H + +++ + E D ++R+ + + ++ L + Sbjct: 248 WIRKHHPYDSG----IIYCLSRRECDTMADTLQRDG---------LAALAYHAGLSDSAR 294 Query: 398 QRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLL 457 + +K G +V+ +T + V FVI K Sbjct: 295 DEV-----QQKWINQDGCQVICATIAFGMGIDKPDVRFVIHASLPK-------------- 335 Query: 458 VTAISKASAQQRAGRAGRTRP-GKCFRLYT 486 S Q +GRAGR C YT Sbjct: 336 ----SVEGYYQESGRAGRDGEISHCLLFYT 361 >3IUY-A nrPDB Length = 228 Score = 43.6 bits (101), Expect = 3e-04, Method: Composition-based stats. Identities = 36/152 (23%), Positives = 62/152 (40%), Gaps = 13/152 (8%) Query: 156 FVLVGETGSGKTTQ--IPQWCVEYMRSLPGPKR---GVACTQPRRVAAMSVAQRVADEMD 210 ++V +TG+GKT +P + + + +R G+ P R A+ V + Sbjct: 60 LIVVAQTGTGKTLSYLMPGFIHLDSQPISREQRNGPGMLVLTPTRELALHVEAECSKYSY 119 Query: 211 VMLGQEVGYSIR-----FEDCSSAKTILKYMTDGMLLREAMNDP-LLERYGVIILDEAHE 264 L Y R ED S I+ T G L MN+ L +++DEA + Sbjct: 120 KGLKSICIYGGRNRNGQIEDISKGVDII-IATPGRLNDLQMNNSVNLRSITYLVIDEA-D 177 Query: 265 RTLATDILMGVLKEVVRQRSDLKVIVMSATLD 296 + L + + K ++ R D + ++ SAT Sbjct: 178 KMLDMEFEPQIRKILLDVRPDRQTVMTSATWP 209 >2I4I-A nrPDB Length = 417 Score = 43.2 bits (100), Expect = 4e-04, Method: Composition-based stats. Identities = 55/381 (14%), Positives = 114/381 (29%), Gaps = 70/381 (18%) Query: 128 YDILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSL------ 181 ++ + PV ++ I+ + + +TGSGKT + + S Sbjct: 30 IELTRYTRPTPVQKHA---IPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYSDGPGEAL 86 Query: 182 --------PGPKRGV---ACTQPRRVAAMSVAQ------RVADEMDVML--GQEVGYSIR 222 G ++ P R A+ + + + ++ G ++G IR Sbjct: 87 RAMKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGADIGQQIR 146 Query: 223 FEDCSSAKTILKYMTDGMLLREAMNDP-LLERYGVIILDEAH---ERTLATDILMGVLKE 278 L T G L+ L+ ++LDEA + I V ++ Sbjct: 147 ---DLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQD 203 Query: 279 VVRQRSDLKVIVMSATLDAG--KFQIYFDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAI 336 + + ++ SAT F + + GR T + Sbjct: 204 TMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEESDKR 263 Query: 337 RTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQ 396 ++ + ++ L+F+ ++ D + E ++ + Sbjct: 264 SFLLDLLNATGKDSLTLVFVETKKGADSLEDFLYHEGY---------ACTSIHGDRSQRD 314 Query: 397 QQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESL 456 ++ K ++V+T +A L I V VI+ ++ +E Sbjct: 315 REEALHQFRSGKSP------ILVATAVAARGLDISNVKHVIN--------FDLPSDIEEY 360 Query: 457 LVTAISKASAQQRAGRAGRTR 477 + R GR GR Sbjct: 361 V----------HRIGRTGRVG 371 >2GXQ-A nrPDB Length = 207 Score = 42.8 bits (99), Expect = 6e-04, Method: Composition-based stats. Identities = 43/211 (20%), Positives = 72/211 (34%), Gaps = 27/211 (12%) Query: 118 FTNLPHTPRYYDILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEY 177 F + P P + L R + + + + + TG+GKT E Sbjct: 3 FKDFPLKPEILEALHGRGLTTPTPIQAAALPLALEGKDLIGQARTGTGKTLAFALPIAER 62 Query: 178 M--RSLPGPKRGVACTQPRRVAAMSVA----------QRVADEMDVMLGQEVGYSIRFED 225 + G K P R A+ VA + VA G++ +R D Sbjct: 63 LAPSQERGRKPRALVLTPTRELALQVASELTAVAPHLKVVAVYGGTGYGKQKEALLRGAD 122 Query: 226 --CSSAKTILKYMTDGMLLREAMNDPLLERYGVIILDEAHER-TLATDILMGVLKEVVRQ 282 ++ L Y+ G+L L R V +LDEA E ++ + + L Sbjct: 123 AVVATPGRALDYLRQGVL--------DLSRVEVAVLDEADEMLSMGFEEEVEALLSATP- 173 Query: 283 RSDLKVIVMSATLD--AGKFQIYFDNCPLLT 311 + ++ SATL A + + P+L Sbjct: 174 -PSRQTLLFSATLPSWAKRLAERYMKNPVLI 203 >4W7S-A nrPDB Length = 463 Score = 42.4 bits (98), Expect = 9e-04, Method: Composition-based stats. Identities = 64/376 (17%), Positives = 135/376 (35%), Gaps = 56/376 (14%) Query: 130 ILKKRLQLPVWEYKDRFTDI--LVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGP--- 184 I + R P + ++ + +++ F+ V TGSGKT + M P Sbjct: 64 IQELRFPSPTPIQRITIPNVCNMKQYRDFLGVASTGSGKTLAFVIPILIKMSRSPPRPPS 123 Query: 185 -----KRGVACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTI------- 232 P R + Q+ ++ + +E Y + ++ Sbjct: 124 LKIIDGPKALILAPTRELVQQI-QKETQKVTKIWSKESNYDCKVISIVGGHSLEEISFSL 182 Query: 233 -----LKYMTDGMLLREAMNDPL-LERYGVIILDEAHE------RTLATDILMGVLKEVV 280 + T G L+ N L +++ ++LDEA + T+IL V ++ Sbjct: 183 SEGCDILVATPGRLIDSLENHLLVMKQVETLVLDEADKMIDLGFEDQVTNILTKV--DIN 240 Query: 281 RQRSDLKVIVM-SATLDA--GKFQIYFDNCPLLTIPGRTHPVEIFYTPEPE-RDYLEAAI 336 + + +M +AT+ K + P+ G E E D E Sbjct: 241 ADSAVNRQTLMFTATMTPVIEKIAAGYMQKPVYATIGVETGSEPLIQQVVEYADNDEDKF 300 Query: 337 RTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQ 396 + + I + +++F+ ++ D ++ ++E ++K+ L+ + +Q Sbjct: 301 KKLKPIVAKYDPP--IIIFINYKQTADWLAEKFQKET--------NMKVTILHGSKSQEQ 350 Query: 397 QQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQ-KVYNPRIRVES 455 ++ + +++++TN+A L I V V++ +K+ Y RI Sbjct: 351 REHSLQ------LFRTNKVQIMIATNVAARGLDIPNVSLVVNFQISKKMDDYIHRIGRTG 404 Query: 456 LLV---TAISKASAQQ 468 TA+S SA + Sbjct: 405 RAANEGTAVSFVSAAE 420 >3JCR-F nrPDB Length = 820 Score = 42.0 bits (97), Expect = 0.001, Method: Composition-based stats. Identities = 83/450 (18%), Positives = 153/450 (34%), Gaps = 96/450 (21%) Query: 111 LPQCINPFTNLPHTPRYYDILKK---RLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKT 167 +P I + + P +++ K + P+ I ++++ + V ETGSGKT Sbjct: 386 IPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQA---IPIGLQNRDIIGVAETGSGKT 442 Query: 168 TQIPQWCVEYMRSLPGPKR--------GVACTQPRRVAAMSVAQ-----------RVADE 208 + ++ +LP R P R A + + R Sbjct: 443 AAFLIPLLVWITTLPKIDRIEESDQGPYAIILAPTRELAQQIEEETIKFGKPLGIRTVAV 502 Query: 209 MDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPL-LERYGVIILDEAHERTL 267 + + ++ G+ +R + T G L+ N L L R ++LDEA Sbjct: 503 IGGISREDQGFRLRMG------CEIVIATPGRLIDVLENRYLVLSRCTYVVLDEADRM-- 554 Query: 268 ATDILMGVLKEVVRQRSDLKVI-------------VMSATLDAGKFQIYFDNCPLLTIPG 314 I MG +V + + V M A ++GK + T+P Sbjct: 555 ---IDMGFEPDVQKILEHMPVSNQKPDTDEAEDPEKMLANFESGKHKYRQTVMFTATMPP 611 Query: 315 RTHPVEIFYTPEPERDYLEAAIRTVIQIH-----MCEEEEGDLLLFLTGQE--------- 360 + Y P Y+ +A + ++ M E E+ LL + Q Sbjct: 612 AVERLARSYLRRPAVVYIGSAGKPHERVEQKVFLMSESEKRKKLLAILEQGFDPPIIIFV 671 Query: 361 EIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVS 420 + C + + ++ +G L+ +Q++ A + ++V+ Sbjct: 672 NQKKGCDVLAKSLEKMGYNA-----CTLHGGKGQEQREFALS------NLKAGAKDILVA 720 Query: 421 TNIAETSLTIDGVVFVIDPGFAKQ-KVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPG 479 T++A + I V V++ AK + Y RI R GRAG++ Sbjct: 721 TDVAGRGIDIQDVSMVVNYDMAKNIEDYIHRIG----------------RTGRAGKSGVA 764 Query: 480 KCFRLYTEKAYKTEMQDNTYPEILRSNLGS 509 F + A E++ IL S + S Sbjct: 765 ITFLTKEDSAVFYELKQA----ILESPVSS 790 Score = 35.5 bits (80), Expect = 0.083, Method: Composition-based stats. Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 10/51 (19%) Query: 18 KRAGTDGKDRDRDRDREDRSKDRDRE----------RDRGDREREREKEKE 58 K + KDRDRD+D R KDR R + R DR+ ++++E E Sbjct: 81 KERDRNKKDRDRDKDGHRRDKDRKRSSLSPGRGKDFKSRKDRDSKKDEEDE 131 Score = 33.9 bits (76), Expect = 0.29, Method: Composition-based stats. Identities = 11/26 (42%), Positives = 20/26 (76%) Query: 28 DRDRDREDRSKDRDRERDRGDRERER 53 D++RDR + +DRD++ R D++R+R Sbjct: 80 DKERDRNKKDRDRDKDGHRRDKDRKR 105 Score = 31.6 bits (70), Expect = 1.5, Method: Composition-based stats. Identities = 12/30 (40%), Positives = 23/30 (76%), Gaps = 4/30 (13%) Query: 26 DRDRDRDREDRSKDRDRERDRGDREREREK 55 D++RDR++ KDRDR++D R+++R++ Sbjct: 80 DKERDRNK----KDRDRDKDGHRRDKDRKR 105 >2PL3-A nrPDB Length = 236 Score = 42.0 bits (97), Expect = 0.001, Method: Composition-based stats. Identities = 42/192 (21%), Positives = 76/192 (39%), Gaps = 16/192 (8%) Query: 115 INPFTNLPHTPRYYDILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWC 174 I F++ P + + L++ V E + + + ++ + + +TGSGKT Sbjct: 24 ITRFSDFPLSKKTLKGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPV 83 Query: 175 VEYMRSLPGP---KRGVACTQPRRVAA---MSVAQRVADEMDVMLGQEV-GYSIRFEDCS 227 +E + L GV P R A V ++V D G + G ++ E Sbjct: 84 LEALYRLQWTSTDGLGVLIISPTRELAYQTFEVLRKVGKNHDFSAGLIIGGKDLKHEAER 143 Query: 228 SAKTILKYMTDGMLLREA--MNDPLLERYGVIILDEAHERTLA---TDILMGVLKEVVRQ 282 + T G LL+ +++LDEA +R L D + V++ + ++ Sbjct: 144 INNINILVCTPGRLLQHMDETVSFHATDLQMLVLDEA-DRILDMGFADTMNAVIENLPKK 202 Query: 283 RSDLKVIVMSAT 294 R L + SAT Sbjct: 203 RQTL---LFSAT 211 >3MKD-A nrPDB Length = 692 Score = 40.9 bits (94), Expect = 0.002, Method: Composition-based stats. Identities = 23/81 (28%), Positives = 40/81 (49%), Gaps = 13/81 (16%) Query: 115 INPFTNLP-HTPRYYDILKKRLQLPV---------WEYKDRFTDILVRHQSFVLVGETGS 164 +NPF +P +T DI K R + V Y+ D ++QS ++ GE+G+ Sbjct: 125 VNPFKRIPIYTQEMVDIFKGRRRNEVAPHIFAISDVAYRSMLDD--RQNQSLLITGESGA 182 Query: 165 GKTTQIPQWCVEYMRSLPGPK 185 GK T+ + ++Y+ S+ G Sbjct: 183 GK-TENTKKVIQYLASVAGRN 202 >2JJ9-A nrPDB Length = 788 Score = 40.9 bits (94), Expect = 0.002, Method: Composition-based stats. Identities = 23/81 (28%), Positives = 40/81 (49%), Gaps = 13/81 (16%) Query: 115 INPFTNLP-HTPRYYDILKKRLQLPV---------WEYKDRFTDILVRHQSFVLVGETGS 164 +NPF +P +T DI K R + V Y+ D ++QS ++ GE+G+ Sbjct: 137 VNPFKRIPIYTQEMVDIFKGRRRNEVAPHIFAISDVAYRSMLDD--RQNQSLLITGESGA 194 Query: 165 GKTTQIPQWCVEYMRSLPGPK 185 GK T+ + ++Y+ S+ G Sbjct: 195 GK-TENTKKVIQYLASVAGRN 214 >3DKP-A nrPDB Length = 245 Score = 40.1 bits (92), Expect = 0.004, Method: Composition-based stats. Identities = 35/179 (19%), Positives = 57/179 (31%), Gaps = 25/179 (13%) Query: 102 HAGHAGHTSLPQCINPFTNLPHTPRY-----YDILKKRLQLPVWEYKDRFTDILVRHQSF 156 H H T LP I F L + +IL Q+P +L + Sbjct: 11 HKIHVQGTDLPDPIATFQQLDQEYKINSRLLQNILDAGFQMPTPIQMQAIPVMLHGRE-L 69 Query: 157 VLVGETGSGKTTQIPQWCVEYMRSLPGPKRGVACTQPRRVAAMSVAQRVADEMDVMLGQE 216 + TGSGKT + ++ P R A + + + + + + Sbjct: 70 LASAPTGSGKTLAFSIPILMQLKQPANKGFRALIISPTRELASQIHREL-----IKISEG 124 Query: 217 VGYSI-----------RFEDCSSAKTILKYMTDGMLLREAMNDP---LLERYGVIILDE 261 G+ I +F SS K + T L+ DP L +++DE Sbjct: 125 TGFRIHMIHKAAVAAKKFGPKSSKKFDILVTTPNRLIYLLKQDPPGIDLASVEWLVVDE 183 >4B3F-X nrPDB Length = 646 Score = 39.7 bits (91), Expect = 0.005, Method: Composition-based stats. Identities = 14/65 (21%), Positives = 31/65 (47%), Gaps = 4/65 (6%) Query: 142 YKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGVACTQPRRVAAMSV 201 K+ L + + ++ G G+GKTT + + ++ ++ V C P +A ++ Sbjct: 194 QKEAVLFALSQKELAIIHGPPGTGKTTTVVEIILQAVKQG----LKVLCCAPSNIAVDNL 249 Query: 202 AQRVA 206 +R+A Sbjct: 250 VERLA 254 >5GJU-A nrPDB Length = 205 Score = 39.7 bits (91), Expect = 0.005, Method: Composition-based stats. Identities = 34/167 (20%), Positives = 62/167 (37%), Gaps = 19/167 (11%) Query: 143 KDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGVACTQPRRVAAMSVA 202 + L+ + + + +TGSGKT ++ + + P R A+ VA Sbjct: 28 QAECIPHLLNGRDVLGMAQTGSGKTAAFSLPLLQNLDPEL-KAPQILVLAPTRELAVQVA 86 Query: 203 QRVADEMDVMLGQEV-------GYSIRFEDCSSAKTILKYMTDGMLLREAMNDP-LLERY 254 + + D M G V Y ++ I+ T G LL L + Sbjct: 87 EAMTDFSKHMRGVNVVALYGGQRYDVQLRALRQGPQIV-VGTPGRLLDHLKRGTLDLSKL 145 Query: 255 GVIILDEAHERTLATDILMGVLKEVVRQRSDL----KVIVMSATLDA 297 ++LDEA E + MG +++V + + + + SAT+ Sbjct: 146 SGLVLDEADEM-----LRMGFIEDVETIMAQIPEGHQTALFSATMPE 187 >3JAX-A nrPDB Length = 974 Score = 39.3 bits (90), Expect = 0.006, Method: Composition-based stats. Identities = 22/83 (26%), Positives = 40/83 (48%), Gaps = 13/83 (15%) Query: 115 INPFTNLP-HTPRYYDILK--KRLQLPVW-------EYKDRFTDILVRHQSFVLVGETGS 164 INP+ LP ++ + D+ K KR ++P Y+ D QS + GE+G+ Sbjct: 124 INPYKQLPIYSEKIIDMYKGKKRHEMPPHIYAIADTAYRSMLQD--REDQSILCTGESGA 181 Query: 165 GKTTQIPQWCVEYMRSLPGPKRG 187 GK T+ + ++Y+ + +G Sbjct: 182 GK-TENTKKVIQYLAVVASSHKG 203 >1BR4-A nrPDB Length = 820 Score = 39.3 bits (90), Expect = 0.006, Method: Composition-based stats. Identities = 22/83 (26%), Positives = 40/83 (48%), Gaps = 13/83 (15%) Query: 115 INPFTNLP-HTPRYYDILK--KRLQLPVW-------EYKDRFTDILVRHQSFVLVGETGS 164 INP+ LP ++ + D+ K KR ++P Y+ D QS + GE+G+ Sbjct: 123 INPYKQLPIYSEKIIDMYKGKKRHEMPPHIYAIADTAYRSMLQD--REDQSILCTGESGA 180 Query: 165 GKTTQIPQWCVEYMRSLPGPKRG 187 GK T+ + ++Y+ + +G Sbjct: 181 GK-TENTKKVIQYLAVVASSHKG 202 >4D25-A nrPDB Length = 434 Score = 39.3 bits (90), Expect = 0.006, Method: Composition-based stats. Identities = 71/406 (17%), Positives = 134/406 (33%), Gaps = 77/406 (18%) Query: 134 RLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPG--------PK 185 R P+ + I++ + + +TGSGKT + + P + Sbjct: 71 RKPTPI---QKNAIPIIMSGRDLMGCAQTGSGKTAAFLVPIINMLLQDPKDLISENGCAQ 127 Query: 186 RGVACTQPRRVAAMSVAQRVA-DEMDVMLGQEVGY---SIRFE-DCSSAKTILKYMTDGM 240 V P R + + +L V Y ++R + D + + T G Sbjct: 128 PQVIIVSPTRELTLQIFNEARKFSYGSVLKVAVAYGGTAVRHQGDNIARGCHILVATPGR 187 Query: 241 LLREAMNDP-LLERYGVIILDEAHERTLATDILMGVLKEVVRQ--RSDL------KVIVM 291 L + ++LD+A D MG + + + + + ++ Sbjct: 188 LHDFVERNRVSFGSVRFVVLDQA---DCMLD--MGFMPSIEKMMLHPTMVETTKRQTLMF 242 Query: 292 SATLD------AGKFQIYFDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMC 345 SAT AG+F + + + G + VE + E + +++ +I+ Sbjct: 243 SATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFI-EVTKYEKRNSLKQLIE---- 297 Query: 346 EEEEGDLLLFLTGQEEIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPP 405 E + +L+F+ + D + + L S++ + QR E Sbjct: 298 ENDGKRILVFVETKRNADFIAAMLSEQQL-------------LTSSIHGDRMQREREEAL 344 Query: 406 PKKQNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKAS 465 ++G ++V+T +A L I V V++ Y+ S Sbjct: 345 QNFKSGKHC--ILVATAVAARGLDIKNVDIVVN--------YD----------LPKSIDE 384 Query: 466 AQQRAGRAGRTRP-GKCFRLYTEKAYKTEMQDNTYPEILRSNLGSV 510 R GR GR GK Y + D + +ILR SV Sbjct: 385 YVHRIGRTGRVGNRGKAVSFYDSDQDLALVADLS--KILRQADQSV 428 >2ZJ8-A nrPDB Length = 720 Score = 39.3 bits (90), Expect = 0.006, Method: Composition-based stats. Identities = 90/586 (15%), Positives = 189/586 (32%), Gaps = 83/586 (14%) Query: 121 LPHTPRYYDILKKRLQLPVWEYKDRFTDI-LVRHQSFVLVGETGSGKTTQIPQWCVEYMR 179 L R LK+R + + ++ ++ ++ T SGKT V + Sbjct: 6 LRVDERIKSTLKERGIESFYPPQAEALKSGILEGKNALISIPTASGKTLIAEIAMVHRIL 65 Query: 180 SLPGPKRGVACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSS---AKTILKYM 236 + G + P + A Q D +G V + D K + Sbjct: 66 TQGGKAVYIV---PLKALAEEKFQEFQD--WEKIGLRVAMATGDYDSKDEWLGKYDIIIA 120 Query: 237 TDGMLLREAMN-DPLLERYGVIILDEAH-----ERTLATDILMG-VLKEVVRQRSDLKVI 289 T + ++ +++ DE H +R ++++ +L + +I Sbjct: 121 TAEKFDSLLRHGSSWIKDVKILVADEIHLIGSRDRGATLEVILAHMLGKAQ-------II 173 Query: 290 VMSATLDAGKFQIYFDNCPLLTIPGRTHPVE----IFYTPEPERDYLEAAIRTV-----I 340 +SAT+ + + N L+ R PV+ +FY + + +I + Sbjct: 174 GLSATIGNPEELAEWLNAELIVSDWR--PVKLRRGVFYQGFVTWE--DGSIDRFSSWEEL 229 Query: 341 QIHMCEEEEGDLLLFLTGQEEIDEACKRIKREVDDLGPEVGDIKIIPLYSTL---PPQQQ 397 +++G L+F+ + + + + ++V L + + L +L P ++ Sbjct: 230 VYDAIRKKKGA-LIFVNMRRKAERVALELSKKVKSLLTKPEIRALNELADSLEENPTNEK 288 Query: 398 QRIFEPPPPKKQNGAIGR--KVVVSTN----IAETSLTIDGVVFVIDPGFAKQKVYNPRI 451 + +GR +V+V N I + + + I+ + + + Sbjct: 289 LAKAIRGGVAFHHAGLGRDERVLVEENFRKGIIKAVVATPTLSAGINTPAFRVIIRDI-W 347 Query: 452 RVESLLVTAISKASAQQRAGRAGRTR---PGKCFRLYTEKAYKTEMQDNTY--PEILRSN 506 R + I Q GRAGR + G+ + T + M + PE L S Sbjct: 348 RYSDFGMERIPIIEVHQMLGRAGRPKYDEVGEGIIVSTSDDPREVMNHYIFGKPEKLFSQ 407 Query: 507 LGS------------------VVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLA- 547 L + V ++ K + + D + E +R +L +L Sbjct: 408 LSNESNLRSQVLALIATFGYSTVEEILKFISNTFYAYQRKDTYSLEEKIR--NILYFLLE 465 Query: 548 ------ALNDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNE----VLSITAMLSVP 597 +L D LG A+ +DP AKM + + + + ++ Sbjct: 466 NEFIEISLEDKIRPLSLGIRTAKLYIDPYTAKMFKDKMEEVVKDPNPIGIFHLISLTPDI 525 Query: 598 QCFVRPTEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQNHESVQW 643 F + +E F ++ Y + + + Sbjct: 526 TPFNYSKREFERLEEEYYEFKDRLYFDDPYISGYDPYLERKFFRAF 571 >5LBA-B nrPDB Length = 445 Score = 39.0 bits (89), Expect = 0.009, Method: Composition-based stats. Identities = 57/384 (14%), Positives = 119/384 (30%), Gaps = 77/384 (20%) Query: 142 YKDRFTDILVRHQSFVLVGETGSGKTT--QIP-------QWCVEYMRSLPGPKRGVACTQ 192 + ++ ++ + TG+GK+ Q+P V + +L + T Sbjct: 26 QESATMAVVKGNKDVFVCMPTGAGKSLCYQLPALLAKGITIVVSPLIALIQDQVDHLLTL 85 Query: 193 PRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGM-----LLREAMN 247 RV++++ ++ A E +L + +T + Y+T M + Sbjct: 86 KVRVSSLN-SKLSAQERKELLADL--------EREKPQTKILYITPEMAASSSFQPTLNS 136 Query: 248 DPLLERYGVIILDEAH-----ERTLATDIL-MGVLKEVVRQRSDLKVIVMSAT----LDA 297 +++DEAH D L +G L+ + + ++AT + Sbjct: 137 LVSRHLLSYLVVDEAHCVSQWGHDFRPDYLRLGALRSRLGHAP---CVALTATATPQVQE 193 Query: 298 GKFQIYFDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAI------RTVIQIHMCEEEEGD 351 F P+ +FY + + + + + G Sbjct: 194 DVFAALHLKKPVAIFKTPCFRANLFYDVQFKELISDPYGNLKDFCLKALGQEADKGLSGC 253 Query: 352 LLLFLTGQEEIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNG 411 +++ +E ++ + + ++ L + E + Sbjct: 254 GIVYCRTREACEQLAIELSCRGVN---------AKAYHAGL------KASERTLVQNDWM 298 Query: 412 AIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAG 471 V+V+T + V FV AK S A Q +G Sbjct: 299 EEKVPVIVATISFGMGVDKANVRFVAHWNIAK------------------SMAGYYQESG 340 Query: 472 RAGRT-RPGKCFRLYTEKAYKTEM 494 RAGR +P C RLY + + ++ Sbjct: 341 RAGRDGKPSWC-RLYYSRNDRDQV 363 >5LB8-A nrPDB Length = 518 Score = 39.0 bits (89), Expect = 0.009, Method: Composition-based stats. Identities = 57/384 (14%), Positives = 119/384 (30%), Gaps = 77/384 (20%) Query: 142 YKDRFTDILVRHQSFVLVGETGSGKTT--QIP-------QWCVEYMRSLPGPKRGVACTQ 192 + ++ ++ + TG+GK+ Q+P V + +L + T Sbjct: 26 QESATMAVVKGNKDVFVCMPTGAGKSLCYQLPALLAKGITIVVSPLIALIQDQVDHLLTL 85 Query: 193 PRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGM-----LLREAMN 247 RV++++ ++ A E +L + +T + Y+T M + Sbjct: 86 KVRVSSLN-SKLSAQERKELLADL--------EREKPQTKILYITPEMAASSSFQPTLNS 136 Query: 248 DPLLERYGVIILDEAH-----ERTLATDIL-MGVLKEVVRQRSDLKVIVMSAT----LDA 297 +++DEAH D L +G L+ + + ++AT + Sbjct: 137 LVSRHLLSYLVVDEAHCVSQWGHDFRPDYLRLGALRSRLGHAP---CVALTATATPQVQE 193 Query: 298 GKFQIYFDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAI------RTVIQIHMCEEEEGD 351 F P+ +FY + + + + + G Sbjct: 194 DVFAALHLKKPVAIFKTPCFRANLFYDVQFKELISDPYGNLKDFCLKALGQEADKGLSGC 253 Query: 352 LLLFLTGQEEIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNG 411 +++ +E ++ + + ++ L + E + Sbjct: 254 GIVYCRTREACEQLAIELSCRGVN---------AKAYHAGL------KASERTLVQNDWM 298 Query: 412 AIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAG 471 V+V+T + V FV AK S A Q +G Sbjct: 299 EEKVPVIVATISFGMGVDKANVRFVAHWNIAK------------------SMAGYYQESG 340 Query: 472 RAGRT-RPGKCFRLYTEKAYKTEM 494 RAGR +P C RLY + + ++ Sbjct: 341 RAGRDGKPSWC-RLYYSRNDRDQV 363 >5ZBZ-A nrPDB Length = 220 Score = 38.2 bits (87), Expect = 0.014, Method: Composition-based stats. Identities = 29/169 (17%), Positives = 60/169 (35%), Gaps = 12/169 (7%) Query: 138 PVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGVACTQPRRVA 197 P + + + + ++G+GKT ++ + P R Sbjct: 37 PSAIQQRAILPCIKGYDV-IAQAQSGTGKTATFAISILQQIELDL-KATQALVLAPTREL 94 Query: 198 AMSVAQRVADEMDVMLGQEV-----GYSIRFE--DCSSAKTILKYMTDGMLLREAMNDPL 250 A + Q+V + +G G ++R E + T G + L Sbjct: 95 AQQI-QKVVMALGDYMGASCHACIGGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYL 153 Query: 251 LERY-GVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAG 298 +Y + +LDEA E L+ + + S+ +V+++SAT+ + Sbjct: 154 SPKYIKMFVLDEADE-MLSRGFKDQIYDIFQKLNSNTQVVLLSATMPSD 201 >1WP9-A nrPDB Length = 494 Score = 37.8 bits (86), Expect = 0.018, Method: Composition-based stats. Identities = 28/157 (17%), Positives = 57/157 (36%), Gaps = 25/157 (15%) Query: 334 AAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRIKREVDDLGPEVGDIKIIPLYSTLP 393 ++ +I+ + ++ +++F +E + + ++ VG L Sbjct: 346 DKLKEIIREQLQRKQNSKIIVFTNYRETAKKIVNELVKDGIKAKRFVGQASKEN-DRGLS 404 Query: 394 PQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRV 453 ++Q+ I + + N V+V+T++ E L + V V+ Y P Sbjct: 405 QREQKLILDEFARGEFN------VLVATSVGEEGLDVPEVDLVV--------FYEP---- 446 Query: 454 ESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAY 490 + S QR GR GR PG+ L + Sbjct: 447 -----VPSAIRSI-QRRGRTGRHMPGRVIILMAKGTR 477 Score = 32.4 bits (72), Expect = 0.79, Method: Composition-based stats. Identities = 37/190 (19%), Positives = 68/190 (35%), Gaps = 11/190 (5%) Query: 134 RLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGVACTQP 193 R L + + ++V TG GKT I EY + G V P Sbjct: 4 RRDLIQPRIYQEVIYAKCKETNCLIVLPTGLGKTL-IAMMIAEYRLTKYG--GKVLMLAP 60 Query: 194 RRVAAMSVAQRVADEMDVMLGQEVGY----SIRFEDCSSAKTILKYMTDGMLLREAMNDP 249 + + A+ ++ + V S + A+ + T + + + Sbjct: 61 TKPLVLQHAESFRRLFNLPPEKIVALTGEKSPEERSKAWARAKVIVATPQTIENDLLAGR 120 Query: 250 -LLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDA--GKFQIYFDN 306 LE +I+ DEAH R + + + +E RQ + VI ++A+ + K +N Sbjct: 121 ISLEDVSLIVFDEAH-RAVGNYAYVFIAREYKRQAKNPLVIGLTASPGSTPEKIMEVINN 179 Query: 307 CPLLTIPGRT 316 + I R+ Sbjct: 180 LGIEHIEYRS 189 >2Z0M-A nrPDB Length = 337 Score = 37.8 bits (86), Expect = 0.021, Method: Composition-based stats. Identities = 64/368 (17%), Positives = 126/368 (34%), Gaps = 75/368 (20%) Query: 141 EYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGVACTQPRRVAAMS 200 E + + ++++ ++ V+ +TGSGKT +E P R Sbjct: 19 EVQSKTIPLMLQGKNVVVRAKTGSGKTAAYAIPILELGM-------KSLVVTPTRELTRQ 71 Query: 201 VAQRVAD---EMDVMLGQEVG---YSIRFEDCSSAKTILKYMTDGMLLR-EAMNDPLLER 253 VA + D MD + + G Y + + T G LL + L Sbjct: 72 VASHIRDIGRYMDTKVAEVYGGMPYKAQINRV--RNADIVVATPGRLLDLWSKGVIDLSS 129 Query: 254 YGVIILDEAHERTLATDILMGV-----LKEVVRQRSDLKVI-VMSATLDAG---KFQIYF 304 + ++I+DEA D++ + +K ++ Q S+ K+ + SAT+ + + Sbjct: 130 FEIVIIDEA-------DLMFEMGFIDDIKIILAQTSNRKITGLFSATIPEEIRKVVKDFI 182 Query: 305 DNCPLLTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEIDE 364 N + VE + +D + ++ + E ++ +++F+ + + + Sbjct: 183 TNYEEIEACIGLANVEHKFVH--VKDDWRSKVQALR-----ENKDKGVIVFVRTRNRVAK 235 Query: 365 ACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIA 424 + I L LP + R + + + ++++T++A Sbjct: 236 LVRLFDN-------------AIELRGDLPQSVRNRNIDAFREGEYD------MLITTDVA 276 Query: 425 ETSLTIDGVVFVID-PGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCFR 483 L I V VI+ + Y RI R GR GR F Sbjct: 277 SRGLDIPLVEKVINFDAPQDLRTYIHRIG----------------RTGRMGRKGEAITFI 320 Query: 484 LYTEKAYK 491 L K Sbjct: 321 LNEYWLEK 328 >5L3S-B nrPDB Length = 296 Score = 37.4 bits (85), Expect = 0.027, Method: Composition-based stats. Identities = 34/193 (17%), Positives = 74/193 (38%), Gaps = 36/193 (18%) Query: 132 KKRLQLPVWEYKDRFTDILVRHQ----------------SFVLVGETGSGKTTQIPQWCV 175 ++ ++ + K T+IL ++Q + G G GKTT I + Sbjct: 64 EEVEEIVINTLKKSITEILTKNQKTDLIEKIRSSGKKPFVIIFFGVNGVGKTTTIAKVV- 122 Query: 176 EYMRSLPGPKRGVACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKY 235 M +A + R AA A +++V L IR + + ++ Sbjct: 123 -NMLKKNNLSTIIAASDTFRAAAQEQLAYHASKLEVQL-------IRGKYGADPASVAF- 173 Query: 236 MTDGMLLREAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMS--A 293 +A++ V+++D A + +D++ + K + + D +++++ A Sbjct: 174 --------DAISFAKSRNIDVVLIDTAGRMHIDSDLVEELKKVLRIAKPDFRILILDSLA 225 Query: 294 TLDAGKFQIYFDN 306 DA + +F+N Sbjct: 226 GSDALEQARHFEN 238 >5I4E-A nrPDB Length = 980 Score = 36.6 bits (83), Expect = 0.041, Method: Composition-based stats. Identities = 24/84 (28%), Positives = 37/84 (44%), Gaps = 15/84 (17%) Query: 115 INPFTNLP-HTPRYYDIL--KKRLQLPVW-------EYKDRFTDILVRHQSFVLVGETGS 164 INP+ LP +T ++ KKR ++P Y+ D QS + GE+G+ Sbjct: 99 INPYKQLPIYTEAIVEMYRGKKRHEVPPHVYAVTEGAYRSMLQD--REDQSILCTGESGA 156 Query: 165 GK---TTQIPQWCVEYMRSLPGPK 185 GK T ++ Q+ S G K Sbjct: 157 GKTENTKKVIQYLAHVASSPKGRK 180 >1Q0U-A nrPDB Length = 219 Score = 36.6 bits (83), Expect = 0.043, Method: Composition-based stats. Identities = 45/229 (19%), Positives = 78/229 (34%), Gaps = 57/229 (24%) Query: 118 FTNLPHTPRYYDILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEY 177 FT P P + +K E ++R +R +S V +TG+GKT +E Sbjct: 6 FTRFPFQPFIIEAIKTLRFYKPTEIQERIIPGALRGESMVGQSQTGTGKTHAYLLPIMEK 65 Query: 178 MRSLPGPKRGVACTQPRRVAAMSVA---------------------------QRVADEMD 210 ++ + T P R A + Q+ ++++ Sbjct: 66 IKPERA-EVQAVITAPTRELATQIYHETLKITKFCPKDRMIVARCLIGGTDKQKALEKLN 124 Query: 211 VMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLLERYGVIILDEAHERTLATD 270 V +G R D +RE D +++DEA L D Sbjct: 125 VQPHIVIGTPGRIND---------------FIREQALDVHTAHI--LVVDEA---DLMLD 164 Query: 271 ILMGVLKEV----VRQRSDLKVIVMSATLDAGK---FQIYFDNCPLLTI 312 MG + +V R DL+++V SAT+ + Y +N + + Sbjct: 165 --MGFITDVDQIAARMPKDLQMLVFSATIPEKLKPFLKKYMENPTFVHV 211 >3BER-A nrPDB Length = 249 Score = 36.6 bits (83), Expect = 0.045, Method: Composition-based stats. Identities = 35/167 (20%), Positives = 62/167 (37%), Gaps = 19/167 (11%) Query: 141 EYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGVACTQPRRVAAMS 200 + + + ++ + + + ETGSGKT + + P + T P R A Sbjct: 68 KIQIEAIPLALQGRDIIGLAETGSGKTGAFALPILNALLETPQRLFALVLT-PTRELAFQ 126 Query: 201 VAQRVADEMDVMLGQEVGYSIR-----FEDCSSA-----KTILKYMTDGMLLREAMNDPL 250 ++++ LG +G + S + K + T G L+ N Sbjct: 127 ISEQF-----EALGSSIGVQSAVIVGGIDSMSQSLALAKKPHIIIATPGRLIDHLENTKG 181 Query: 251 --LERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATL 295 L +++DEA +R L D V K + D K + SAT+ Sbjct: 182 FNLRALKYLVMDEA-DRILNMDFETEVDKILKVIPRDRKTFLFSATM 227 >3FTQ-A nrPDB Length = 274 Score = 36.3 bits (82), Expect = 0.052, Method: Composition-based stats. Identities = 38/187 (20%), Positives = 74/187 (39%), Gaps = 19/187 (10%) Query: 156 FVLVGETGSGKTTQIPQWCVEYM---RSLPGPKRGVACTQPRRVAAMSVAQR-VADEMDV 211 ++VGE+G GK+T I + + R +PG + T + + + +R V + V Sbjct: 8 LMVVGESGLGKSTLINSLFLTDLYPERIIPGAAEKIERTVQIEASTVEIEERGVKLRLTV 67 Query: 212 MLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLLERYGVIILDEAH-------- 263 + G +I DC KTI+ Y+ D R ++ L R II + H Sbjct: 68 VDTPGYGDAINCRDCF--KTIISYI-DEQFERYLHDESGLNR-RHIIDNRVHCCFYFISP 123 Query: 264 ERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCPLLTIPGRTHPVEIFY 323 + + +K + + + ++ + A D + + H ++I++ Sbjct: 124 FGHGLKPLDVAFMKAIHNK---VNIVPVIAKADTLTLKERERLKKRILDEIEEHSIKIYH 180 Query: 324 TPEPERD 330 P+ E D Sbjct: 181 LPDAESD 187 >5WRJ-A nrPDB Length = 303 Score = 36.3 bits (82), Expect = 0.059, Method: Composition-based stats. Identities = 32/175 (18%), Positives = 62/175 (35%), Gaps = 20/175 (11%) Query: 571 LAKMVIASCDYNCSNEVLSITAMLSVPQCFVRPTEAKKAADEAKMRFAHIDGD-HLTLLN 629 + M+ A D C E I +L++ Q + R ++ K DEA + +D LL Sbjct: 47 MRAMLDAHPDIRCGEETRVIPRILALKQMWSRSSKEKIRLDEAGVTDEVLDSAMQAFLLE 106 Query: 630 VYHAFKQNHESVQWCYDNFINYRSLMSADNVRQQLSRIMDRFNLPRRSTDFTSRDYYINI 689 + K + C + +SL LSR+ D + + + Sbjct: 107 IIV--KHGEPAPYLCNKDPFALKSLTY-------LSRLFPNAKFLLMVRDGRASVHSMIS 157 Query: 690 RKALVTGYFMQ-----VAHLERTGHYLTVKDNQV-----VQLHPSTVLDHKPEWV 734 RK + G+ + + R + + +V + +H ++ H W+ Sbjct: 158 RKVTIAGFDLNSYRDCLTKWNRAIETMYNQCMEVGYKKCMLVHYEQLVLHPERWM 212 >6DUE-A nrPDB Length = 787 Score = 35.9 bits (81), Expect = 0.080, Method: Composition-based stats. Identities = 32/157 (20%), Positives = 54/157 (34%), Gaps = 16/157 (10%) Query: 115 INPFTNLPHTP-----RYYDILKKRLQLP-VWEYKDRFTD---ILVRHQSFVLVGETGSG 165 INPF +L +T RY D P V+ R D + + Q+ ++ GE+G+G Sbjct: 139 INPFRDLGNTTLDWIVRYRDTFDLSKLAPHVFYTARRALDNLHAVNKSQTIIVSGESGAG 198 Query: 166 KTTQIPQWCVEYMRSLPGPKRGVACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFED 225 KT Q + + G Q +AA V + + + + + Sbjct: 199 KTEATKQIMRYFAAAKTGSMD--LRIQNAIMAANPVLEAFGNAKTIRNNNSSRFGRFMQL 256 Query: 226 CSSAKTILKYMTDGMLL----REAMNDPLLERYGVII 258 + +K+ + L R D Y I Sbjct: 257 DVGREGGIKFGSVVAFLLEKSRVLTQDEQERSY-HIF 292 >6FEC-u nrPDB Length = 636 Score = 35.5 bits (80), Expect = 0.086, Method: Composition-based stats. Identities = 15/30 (50%), Positives = 20/30 (66%) Query: 16 GKKRAGTDGKDRDRDRDREDRSKDRDRERD 45 G +R D D+ +D+DR+DRS RDR RD Sbjct: 187 GNRRIRVDVADQAQDKDRDDRSFGRDRNRD 216 >5W1A-A nrPDB Length = 810 Score = 35.5 bits (80), Expect = 0.087, Method: Composition-based stats. Identities = 21/80 (26%), Positives = 41/80 (51%), Gaps = 9/80 (11%) Query: 115 INPFTNLP-HTPRYYDIL--KKRLQLPVWEYK---DRFTDILVR--HQSFVLVGETGSGK 166 INP+ P +T R + K+R ++P + + D+L +QS ++ GE+G+GK Sbjct: 126 INPYKRYPVYTNRCAKMYRGKRRNEVPPHIFAISDGAYVDMLTNHVNQSMLITGESGAGK 185 Query: 167 TTQIPQWCVEYMRSLPGPKR 186 T+ + + Y ++ K+ Sbjct: 186 -TENTKKVIAYFATVGASKK 204 >2QAG-A nrPDB Length = 361 Score = 35.5 bits (80), Expect = 0.091, Method: Composition-based stats. Identities = 47/230 (20%), Positives = 86/230 (37%), Gaps = 30/230 (13%) Query: 113 QCINPFTNLPHTPRYYDILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQ 172 Q INP TP Y LP ++ + ++VGE+G GK+T I Sbjct: 8 QFINP-----ETPGYVGFAN----LPNQVHRKSVKKGFEF--TLMVVGESGLGKSTLINS 56 Query: 173 WCVEYM---RSLPGPKRGVACTQPRRVAAMSVAQR-VADEMDVMLGQEVGYSIRFEDCSS 228 + + R +PG + T + + + +R V + V+ G +I DC Sbjct: 57 LFLTDLYPERVIPGAAEKIERTVQIEASTVEIEERGVKLRLTVVDTPGYGDAINCRDCF- 115 Query: 229 AKTILKYMTDGMLLREAMNDPLLERYGVIILDEAH--------ERTLATDILMGVLKEVV 280 KTI+ Y+ D R ++ L R II + H + + +K + Sbjct: 116 -KTIISYI-DEQFERYLHDESGLNR-RHIIDNRVHCCFYFISPFGHGLKPLDVAFMKAIH 172 Query: 281 RQRSDLKVIVMSATLDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEPERD 330 + + ++ + A D + + H ++I++ P+ E D Sbjct: 173 NK---VNIVPVIAKADTLTLKERERLKKRILDEIEEHNIKIYHLPDAESD 219 >4BYF-A nrPDB Length = 725 Score = 35.5 bits (80), Expect = 0.099, Method: Composition-based stats. Identities = 27/136 (19%), Positives = 53/136 (38%), Gaps = 15/136 (11%) Query: 115 INPFTN-----LPHTPRYYDILKKRLQLPVWEYKDRFTDILV---RHQSFVLVGETGSGK 166 +NP+ + H RY + + ++ D L R Q+ ++ GE+G+GK Sbjct: 52 VNPYRDLQIYSRQHMERYRGVSFYEVPPHLFAVADTVYRALRTERRDQAVMISGESGAGK 111 Query: 167 TTQIPQWCVEYMRSLPGPKR------GVACTQPRRVAAMSVAQRVADEMDVMLGQEVGYS 220 T + Y + P P+R + + P + A A+ + ++ G+ + Sbjct: 112 TEATKRLLQFYAETCPAPERGGAVRDRLLQSNPV-LEAFGNAKTLRNDNSSRFGKYMDVQ 170 Query: 221 IRFEDCSSAKTILKYM 236 F+ IL Y+ Sbjct: 171 FDFKGAPVGGHILSYL 186 >5H53-A nrPDB Length = 845 Score = 35.1 bits (79), Expect = 0.13, Method: Composition-based stats. Identities = 18/68 (26%), Positives = 30/68 (44%), Gaps = 8/68 (11%) Query: 115 INPFTNLP-HTPRYYDIL--KKRLQLPVWEY-----KDRFTDILVRHQSFVLVGETGSGK 166 +NP+ LP + P KKR + P + +F +QS ++ GE+G+GK Sbjct: 126 VNPYKWLPVYNPEVVTAYRGKKRQEAPPHIFSISDNAYQFMLTDRDNQSILITGESGAGK 185 Query: 167 TTQIPQWC 174 T + Sbjct: 186 TVNTKRVI 193 >6BNQ-I nrPDB Length = 704 Score = 34.7 bits (78), Expect = 0.14, Method: Composition-based stats. Identities = 22/93 (23%), Positives = 41/93 (44%), Gaps = 10/93 (10%) Query: 140 WEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKR----GVACTQPRR 195 ++D +L QS ++ GE+G+GK T+ ++ + Y+ G + + P Sbjct: 132 KAFRD--MKVLKLSQSIIVSGESGAGK-TENTKFVLRYLTESYGTGQDIDDRIVEANPL- 187 Query: 196 VAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSS 228 + A A+ V + G+ V I F + SS Sbjct: 188 LEAFGNAKTVRNNNSSRFGKFV--EIHFNEKSS 218 >2X51-A nrPDB Length = 789 Score = 34.7 bits (78), Expect = 0.14, Method: Composition-based stats. Identities = 22/93 (23%), Positives = 41/93 (44%), Gaps = 10/93 (10%) Query: 140 WEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKR----GVACTQPRR 195 ++D +L QS ++ GE+G+GK T+ ++ + Y+ G + + P Sbjct: 133 KAFRD--MKVLKLSQSIIVSGESGAGK-TENTKFVLRYLTESYGTGQDIDDRIVEANPL- 188 Query: 196 VAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSS 228 + A A+ V + G+ V I F + SS Sbjct: 189 LEAFGNAKTVRNNNSSRFGKFV--EIHFNEKSS 219 >2MYS-A nrPDB Length = 843 Score = 34.7 bits (78), Expect = 0.16, Method: Composition-based stats. Identities = 19/81 (23%), Positives = 36/81 (44%), Gaps = 9/81 (11%) Query: 115 INPFTNLP-HTPRYYDIL--KKRLQLPVWEY-----KDRFTDILVRHQSFVLVGETGSGK 166 +NP+ LP + P+ KKR + P + +F +QS ++ GE+G+GK Sbjct: 126 VNPYKWLPVYNPKVVLAYRGKKRQEAPPHIFSISDNAYQFMLTDRENQSILITGESGAGK 185 Query: 167 TTQIPQWCVEYMRSLPGPKRG 187 T + ++Y ++ Sbjct: 186 TVN-TKRVIQYFATIAASGEK 205 >5YZG-3 nrPDB Length = 754 Score = 34.3 bits (77), Expect = 0.21, Method: Composition-based stats. Identities = 15/43 (34%), Positives = 26/43 (60%), Gaps = 1/43 (2%) Query: 25 KDRDRDRDRED-RSKDRDRERDRGDREREREKEKEKELRASTN 66 + R + RD E+ + K++ + D+ER R KEK K+L + +N Sbjct: 486 RSRSKGRDHENVKEKEKQSDSKGKDQERSRSKEKSKQLESKSN 528 Score = 33.2 bits (74), Expect = 0.48, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 35/67 (52%), Gaps = 5/67 (7%) Query: 1 MSKRHRLDLGEDYPSGKKRAGTDGKDRDRDRDREDRSKDRDRERDRGDREREREKEKEKE 60 M R + E+ +K++ + GKD++R R SK++ ++ + E + K KEK+ Sbjct: 485 MRSRSKGRDHENVKEKEKQSDSKGKDQERSR-----SKEKSKQLESKSNEHDHSKSKEKD 539 Query: 61 LRASTNA 67 RA + + Sbjct: 540 RRAQSRS 546 >6D00-1 nrPDB Length = 883 Score = 33.9 bits (76), Expect = 0.24, Method: Composition-based stats. Identities = 29/149 (19%), Positives = 56/149 (37%), Gaps = 24/149 (16%) Query: 155 SFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGVACTQPRRVAAMSVAQRVADEMDVMLG 214 SF+ +G TG GKT + + ++ + PG + ++ A+S R+ +G Sbjct: 602 SFLFLGPTGCGKTLCV-KELAAFLFNDPGAIVRIDMSEYMEKHAVS---RLVGAPPGYIG 657 Query: 215 QEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLLERYGVIILDEAHERTLATDILMG 274 + G + T++ + + + ILD+ H Sbjct: 658 HDEGGQLTEAVRRRPYTVV------LFDEMEKAHKDVSNLLLQILDDGH----------- 700 Query: 275 VLKEVVRQRSDLK--VIVMSATLDAGKFQ 301 + +R D K +IVM++ L A F+ Sbjct: 701 -CTDSKGRRVDFKNTIIVMTSNLGADLFE 728 >2PX0-A nrPDB Length = 296 Score = 33.9 bits (76), Expect = 0.27, Method: Composition-based stats. Identities = 37/161 (22%), Positives = 60/161 (37%), Gaps = 34/161 (21%) Query: 156 FVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGVA--CTQPRRVAAMSVAQRVADEMDVML 213 VL G TG+GKTT + + S+ + +A T R+AA+ + A+ + L Sbjct: 108 IVLFGSTGAGKTTTLAKL---AAISMLEKHKKIAFITTDTYRIAAVEQLKTYAELLQAPL 164 Query: 214 GQEVGYSI-RFEDCSSAKTILKYMTDGMLLREAMNDPLLERYGVIILDEAHERTLATDIL 272 EV Y+ F+ L Y + +D A R Sbjct: 165 --EVCYTKEEFQQAKE---------------------LFSEYDHVFVDTA-GRNFKDPQY 200 Query: 273 MGVLKEVVRQRSDLK-VIVMSATL---DAGKFQIYFDNCPL 309 + LKE + S ++ +V+SAT D F + P+ Sbjct: 201 IDELKETIPFESSIQSFLVLSATAKYEDMKHIVKRFSSVPV 241 >5V7X-A nrPDB Length = 752 Score = 33.9 bits (76), Expect = 0.31, Method: Composition-based stats. Identities = 19/82 (23%), Positives = 38/82 (46%), Gaps = 9/82 (10%) Query: 115 INPFTNLP-HTPRYYDILKKR---LQLP-VWEYKDRFTDILVR---HQSFVLVGETGSGK 166 +NP+ +LP ++P + + R P ++ D L Q ++ GE+G+GK Sbjct: 55 VNPYRSLPIYSPEKVEDYRNRNFYELSPHIFALSDEAYRSLRDQDKDQCILITGESGAGK 114 Query: 167 TTQIPQWCVEYMRSLPGPKRGV 188 T+ + + Y+ ++ G V Sbjct: 115 -TEASKLVMSYVAAVCGKGAEV 135 >4ON9-A nrPDB Length = 580 Score = 33.6 bits (75), Expect = 0.31, Method: Composition-based stats. Identities = 56/359 (15%), Positives = 119/359 (33%), Gaps = 71/359 (19%) Query: 122 PHTPRYYDILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSL 181 P PR Y + L LP + K+ ++ TG GKT C +++ Sbjct: 27 PFKPRNYQLE---LALPAMKGKN-----------TIICAPTGCGKTFVSLLICEHHLKKF 72 Query: 182 PGPKRGVACT----QPRRVAAMSVAQRVADEMD---VMLGQEVGYSIRFEDCSSAKTILK 234 P ++G P SV + + + ++ E I+ Sbjct: 73 PQGQKGKVVFFANQIPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDII- 131 Query: 235 YMTDGMLLREAMND--PLLERYGVIILDEAHERTLATDILMGVLKEVVRQ-----RSDLK 287 +T +L+ P L + ++I DE H + M + + ++ + Sbjct: 132 ILTPQILVNNLKKGTIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQ 191 Query: 288 VIVMSATLDAG-------------KFQIYFDNCPLLTIPGRTHPVEIF----YTPEPERD 330 VI ++A++ G K D + T+ H +E Y P+ Sbjct: 192 VIGLTASVGVGDAKNTDEALDYICKLCASLDASVIATV---KHNLEELEQVVYKPQKFFR 248 Query: 331 YLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRIKREVDDLGP-EVGDIKIIPLY 389 +E+ I + + + + + KRI +++++L + + Sbjct: 249 KVESRISDKFKYIIAQLMR-----------DTESLAKRICKDLENLSQIQNREFGTQKYE 297 Query: 390 STLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTN----------IAETSLTIDGVVFVID 438 + Q+ + P K + I + + + T+ I+E + D + ++ D Sbjct: 298 QWIVTVQKACMVFQMPDKDEESRICKALFLYTSHLRKYNDALIISEHARMKDALDYLKD 356 >6IC4-I nrPDB Length = 233 Score = 33.6 bits (75), Expect = 0.33, Method: Composition-based stats. Identities = 47/221 (21%), Positives = 77/221 (34%), Gaps = 39/221 (17%) Query: 144 DRFTDILVRHQSFVLVGETGSGKTTQIPQ---WCVEYMRSLPGPKRGVACTQPRRVAAMS 200 D + + R Q ++G +G+GKTT + V + + +A +R Sbjct: 18 DNISLNIRRGQITAIMGPSGTGKTTLLRLIGGQLVPDQGEVLLDGKDIAQMSRQRARMGM 77 Query: 201 VAQRVADEMDVMLGQEVGYSIRF----EDCSSAKTILKYMTDGM---------------- 240 + Q A D+ + + V + IR E+ + LK + G+ Sbjct: 78 LFQSGALFTDMSVYENVAFPIRAHTLSENLIAELVALKLESVGLRGTEQLMPTELSGGMN 137 Query: 241 ----LLREAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQ-RS--DLKVIVMSA 293 L R DP L I+ DE I+ GVL ++R R DL I++S Sbjct: 138 RRVALARAIALDPDL-----IMYDE--PFAGQDPIVKGVLTRLIRSLREALDLTTIIVSH 190 Query: 294 TLDAG-KFQIYFDNCPLLTIPGRTHPVEIF-YTPEPERDYL 332 + Y I G P E+ Y + +L Sbjct: 191 DVPETLSIADYIYVVAEGKIQGEGTPEELQAYASPFVKQFL 231 >6EM8-A nrPDB Length = 818 Score = 33.6 bits (75), Expect = 0.37, Method: Composition-based stats. Identities = 36/249 (14%), Positives = 83/249 (33%), Gaps = 34/249 (13%) Query: 155 SFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGVACTQPRRVAAMSVAQRVADEMDVMLG 214 SF+ +G TG GK T++ + E M V ++ A+S R+ +G Sbjct: 540 SFIFLGPTGVGK-TELARALAESMFGDDDAMIRVDMSEFMEKHAVS---RLVGAPPGYVG 595 Query: 215 QEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLLERYGVIILDEAHERTLATDILMG 274 + G + + +++ + P + + +LD+ H Sbjct: 596 HDDGGQLTEKVRRKPYSVI------LFDEIEKAHPDVFNILLQVLDDGHLTDTK------ 643 Query: 275 VLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEPERDYLEA 334 V R+ +I+M++ + A + Q + G+ + + ++ Sbjct: 644 --GRTVDFRNT--IIIMTSNVGAQELQDQRFAGFGGSSDGQDYETIRKTMLKELKNSFRP 699 Query: 335 AIR----TVIQIHMCEEEEGDLLLFLTGQEEIDEACKRIKRE------VDDLGPEVGDIK 384 +I H +EE ++ + +++ R+ + D ++ + Sbjct: 700 EFLNRVDDIIVFHKLTKEELKEIVTM----MVNKLTNRLSEQNINIIVTDKAKDKIAEEG 755 Query: 385 IIPLYSTLP 393 P Y P Sbjct: 756 YDPEYGARP 764 >4BPB-A nrPDB Length = 698 Score = 33.6 bits (75), Expect = 0.39, Method: Composition-based stats. Identities = 56/359 (15%), Positives = 119/359 (33%), Gaps = 71/359 (19%) Query: 122 PHTPRYYDILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSL 181 P PR Y + L LP + K+ ++ TG GKT C +++ Sbjct: 11 PFKPRNYQLE---LALPAMKGKN-----------TIICAPTGCGKTFVSLLICEHHLKKF 56 Query: 182 PGPKRGVACT----QPRRVAAMSVAQRVADEMD---VMLGQEVGYSIRFEDCSSAKTILK 234 P ++G P SV + + + ++ E I+ Sbjct: 57 PQGQKGKVVFFANQIPVYEQNKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDII- 115 Query: 235 YMTDGMLLREAMND--PLLERYGVIILDEAHERTLATDILMGVLKEVVRQ-----RSDLK 287 +T +L+ P L + ++I DE H + M + + ++ + Sbjct: 116 ILTPQILVNNLKKGTIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQ 175 Query: 288 VIVMSATLDAG-------------KFQIYFDNCPLLTIPGRTHPVEIF----YTPEPERD 330 VI ++A++ G K D + T+ H +E Y P+ Sbjct: 176 VIGLTASVGVGDAKTTDEALDYICKLCASLDASVIATV---KHNLEELEQVVYKPQKFFR 232 Query: 331 YLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRIKREVDDLGP-EVGDIKIIPLY 389 +E+ I + + + + + KRI +++++L + + Sbjct: 233 KVESRISDKFKYIIAQLMR-----------DTESLAKRICKDLENLSQIQNREFGTQKYE 281 Query: 390 STLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTN----------IAETSLTIDGVVFVID 438 + Q+ + P K + I + + + T+ I+E + D + ++ D Sbjct: 282 QWIVTVQKACMVFQMPDKDEESRICKALFLYTSHLRKYNDALIISEHARMKDALDYLKD 340 >3DM5-A nrPDB Length = 443 Score = 33.2 bits (74), Expect = 0.42, Method: Composition-based stats. Identities = 32/158 (20%), Positives = 58/158 (36%), Gaps = 22/158 (13%) Query: 147 TDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGVACTQPRRVAAMSVAQRVA 206 +I + ++VG GSGKTT + + + G K GV C+ R A ++ Sbjct: 94 IEIKEKPTILLMVGIQGSGKTTTVAK--LARYFQKRGYKVGVVCSDTWRPGA---YHQLR 148 Query: 207 DEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLLERYGVIILDEA--HE 264 +D Y I K +K +G+ + + +II+D A H+ Sbjct: 149 QLLDR-------YHIEVFGNPQEKDAIKLAKEGV------DYFKSKGVDIIIVDTAGRHK 195 Query: 265 RTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQI 302 A M + V+ ++V+ T+ + Sbjct: 196 EDKALIEEMKQISNVI--HPHEVILVIDGTIGQQAYNQ 231 >5OVO-B nrPDB Length = 99 Score = 32.8 bits (73), Expect = 0.53, Method: Composition-based stats. Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 2/78 (2%) Query: 424 AETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLV--TAISKASAQQRAGRAGRTRPGKC 481 A TSL I G+ GF +QK + P+++VE + A Q+A GR GK Sbjct: 19 ALTSLGIQGLTVSEVKGFGRQKGFLPKVKVEVAVSDDQYEQVVEAIQKAANTGRIGDGKI 78 Query: 482 FRLYTEKAYKTEMQDNTY 499 F L +A + + Sbjct: 79 FVLDIAQAVRIRTGETNT 96 >3I5H-A nrPDB Length = 839 Score = 32.8 bits (73), Expect = 0.54, Method: Composition-based stats. Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 8/61 (13%) Query: 115 INPFTNLP-HTPRYYDIL--KKRLQLPVWEY-----KDRFTDILVRHQSFVLVGETGSGK 166 INP+ LP +T D K+R ++P + ++ +QS ++ GE+G+GK Sbjct: 123 INPYRRLPIYTQGLVDKYRGKRRAEMPPHLFSIADNAYQYMLQDRENQSMLITGESGAGK 182 Query: 167 T 167 T Sbjct: 183 T 183 >1VPK-A nrPDB Length = 378 Score = 32.8 bits (73), Expect = 0.59, Method: Composition-based stats. Identities = 40/218 (18%), Positives = 69/218 (31%), Gaps = 35/218 (16%) Query: 257 IILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCPLLTIPGRT 316 ++ DE E +L D L+ + + ++ T+ A +F G T Sbjct: 93 VLPDEITELSLEGDALV-----ISSGSTVFRI----TTMPADEFPEITP-----AESGIT 138 Query: 317 HPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRIKREVDDL 376 V+ E +E I + G +F E + + + L Sbjct: 139 FEVDTSLLEE----MVEKVIFAAAKDEFMRNLNG---VF---WELHKNLLRLVASDGFRL 188 Query: 377 GPEVGDIKIIPLYSTLPP-----QQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTID 431 I+ S L + Q + P GR+V +STN ET Sbjct: 189 ALAEEQIENEEEASFLLSLKSMKEVQNVLDNTTEPTITVRYDGRRVSLSTNDVET----- 243 Query: 432 GVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQR 469 V+ V+D F K P ++V+ + +R Sbjct: 244 -VMRVVDAEFPDYKRVIPETFKTKVVVSRKELRESLKR 280 >4CIU-A nrPDB Length = 727 Score = 32.8 bits (73), Expect = 0.63, Method: Composition-based stats. Identities = 55/347 (15%), Positives = 120/347 (34%), Gaps = 78/347 (22%) Query: 118 FTNLPHTPRYYDILKKRLQLPVWEYK------------DRFTDILVRHQ----------- 154 +T +P + + +R +L E + D ++ + R + Sbjct: 401 WTGIPVSRM---MESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIG 457 Query: 155 SFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGVACTQPRRVAAMSVAQRVADEMDVMLG 214 SF+ +G TG GK T++ + +M + ++ ++S ++G Sbjct: 458 SFLFLGPTGVGK-TELCKALANFMFDSDEAMVRIDMSEFMEKHSVS----------RLVG 506 Query: 215 QEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLLERYGVIILD---EAHERTLATDI 271 GY + Y G L P Y VI+LD +AH + Sbjct: 507 APPGY-------------VGYEEGGYLTEAVRRRP----YSVILLDAVEKAHPDVFNILL 549 Query: 272 LM---GVLKEVVRQRSDLK--VIVMSATLDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPE 326 + G L + + D + V++M++ L + Q F ++ Sbjct: 550 QVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAH-------MKELVLGV 602 Query: 327 PERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRIKREVDDLGPEVGDIKII 386 ++ I + ++ + G+ + Q ++ KR++ ++ +K++ Sbjct: 603 VSHNFRPEFINRIDEVVVFHPL-GEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLL 661 Query: 387 ------PLYSTLPPQQ--QQRIFEPPPPKKQNGAIGRKVVVSTNIAE 425 P+Y P ++ QQ+I P + +G + V+ + E Sbjct: 662 SENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNE 708 >6EMW-B nrPDB Length = 225 Score = 32.4 bits (72), Expect = 0.75, Method: Composition-based stats. Identities = 26/148 (17%), Positives = 54/148 (36%), Gaps = 20/148 (13%) Query: 155 SFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGVACTQPRRVAAMSVAQRVADEMDVMLG 214 SF+ +G TG GK T++ + E M V ++ A+S R+ +G Sbjct: 53 SFIFLGPTGVGK-TELARALAESMFGDDDAMIRVDMSEFMEKHAVS---RLVGAPPGYVG 108 Query: 215 QEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLLERYGVIILDEAHERTLATDILMG 274 + G + + +++ + P + + +LD+ H Sbjct: 109 HDDGGQLTEKVRRKPYSVI------LFDEIEKAHPDVFNILLQVLDDGHLTDTK------ 156 Query: 275 VLKEVVRQRSDLKVIVMSATLDAGKFQI 302 V R+ +I+M++ + A + Q Sbjct: 157 --GRTVDFRNT--IIIMTSNVGAQELQD 180 >2B0U-A nrPDB Length = 116 Score = 32.0 bits (71), Expect = 0.91, Method: Composition-based stats. Identities = 18/50 (36%), Positives = 24/50 (48%) Query: 80 SHSAHSTHSAHSTHSTHSAHSTHAGHAGHTSLPQCINPFTNLPHTPRYYD 129 SH A ++ S+ S HST H GH+ +L C P P + YYD Sbjct: 46 SHIAGTSGSSLSFHSTVINHYRMRGHSPFANLKSCCVPTKLRPMSMLYYD 95 >5HLY-A nrPDB Length = 383 Score = 32.0 bits (71), Expect = 0.98, Method: Composition-based stats. Identities = 18/50 (36%), Positives = 24/50 (48%) Query: 80 SHSAHSTHSAHSTHSTHSAHSTHAGHAGHTSLPQCINPFTNLPHTPRYYD 129 SH A ++ S+ S HST H GH+ +L C P P + YYD Sbjct: 313 SHIAGTSGSSLSFHSTVINHYRMRGHSPFANLKSCCVPTKLRPMSMLYYD 362 >3RC8-A nrPDB Length = 677 Score = 32.0 bits (71), Expect = 0.99, Method: Composition-based stats. Identities = 20/88 (22%), Positives = 34/88 (38%), Gaps = 9/88 (10%) Query: 388 LYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVY 447 +Y +LPP + K++V+T+ L + + +I K + Sbjct: 350 IYGSLPPGTKLA---QAKKFNDPNDPC-KILVATDAIGMGLNL-SIRRIIFYSLIKPSIN 404 Query: 448 NPRIRVESLLVTAISKASAQQRAGRAGR 475 R + I+ + A Q AGRAGR Sbjct: 405 EKGER----ELEPITTSQALQIAGRAGR 428 >4NL8-A nrPDB Length = 747 Score = 31.6 bits (70), Expect = 1.4, Method: Composition-based stats. Identities = 43/225 (19%), Positives = 79/225 (35%), Gaps = 29/225 (12%) Query: 149 ILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGVACTQPRRVAAMSVAQRVADE 208 R +++L G TGSGK T++ +E + R P R Sbjct: 228 AADRFSAWLLAGITGSGK-TEVYLSVLENVL---AQGRQALVMVPEIGLTPQTIARFRQR 283 Query: 209 MD---VMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLLERYGVIILDEAHER 265 + +L + S R AK + G R ++ P + GVI++DE H+ Sbjct: 284 FNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIG--TRSSLFTP-FKDLGVIVIDEEHDS 340 Query: 266 TLATDI-------LMGVLKEVVRQRSDLKVIVMSATLDAGKF----QIYFDNCPLLTIPG 314 + + V + + +I+ SAT Q + L G Sbjct: 341 SYKQQEGWRYHARDLAVWR---AHSEQIPIILGSATPALETLHNVRQGKYRQLTLSKRAG 397 Query: 315 RTHPVEIFYTP---EPERDYLEAAIRTVIQIHMCEEEEGDLLLFL 356 P + +P + L A+ + ++ H+ + + ++LFL Sbjct: 398 NARPAQQHVLDLKGQPLQAGLSPALISRMRQHL--QADNQVILFL 440 >6DCR-A nrPDB Length = 694 Score = 31.6 bits (70), Expect = 1.4, Method: Composition-based stats. Identities = 31/155 (20%), Positives = 53/155 (34%), Gaps = 20/155 (12%) Query: 157 VLVGETGSGKTTQIPQWCVEYMRSLPGPKRGVACTQPRRVAAMSVAQRVADEMD---VML 213 +L G TGSGK T++ +E + + P R + + +L Sbjct: 183 LLAGVTGSGK-TEVYLSVLENVL---AQGKQALVMVPEIGLTPQTIARFRERFNAPVEVL 238 Query: 214 GQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLLERYGVIILDEAHERTLATDI-- 271 + S R AK + G R A+ P + GVI++DE H+ + Sbjct: 239 HSGLNDSERLSAWLKAKNGEAAIVIG--TRSALFTP-FKNLGVIVIDEEHDSSYKQQEGW 295 Query: 272 -----LMGVLKEVVRQRSDLKVIVMSATLDAGKFQ 301 + V + + +I+ SAT Sbjct: 296 RYHARDLAVYR---AHSEQIPIILGSATPALETLC 327 >2OUK-A nrPDB Length = 263 Score = 31.6 bits (70), Expect = 1.5, Method: Composition-based stats. Identities = 10/48 (20%), Positives = 21/48 (43%) Query: 123 HTPRYYDILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQI 170 H + D+ + + E + + V++G +GSGK+T + Sbjct: 20 HMLQMIDVHQLKKSFGSLEVLKGINVHIREGEVVVVIGPSGSGKSTFL 67 >2GZA-A nrPDB Length = 361 Score = 31.2 bits (69), Expect = 1.7, Method: Composition-based stats. Identities = 11/41 (26%), Positives = 19/41 (46%), Gaps = 1/41 (2%) Query: 142 YKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLP 182 Y + + V+ GETGSGKTT + + ++ + Sbjct: 164 YMSFLRRAVQLERVIVVAGETGSGKTT-LMKALMQEIPFDQ 203 >6QUZ-B nrPDB Length = 599 Score = 31.2 bits (69), Expect = 1.8, Method: Composition-based stats. Identities = 34/138 (24%), Positives = 51/138 (36%), Gaps = 18/138 (13%) Query: 135 LQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGVACTQPR 194 + PV + T + Q LVG TGSGKTT I + + G R Sbjct: 366 KKKPVLK---DITFHIKPGQKVALVGPTGSGKTT-IVNLLMRFYDVDRGQILVDGIDI-R 420 Query: 195 RVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLLERY 254 ++ S + + ++L + +S ++ K LKY G E L Sbjct: 421 KIKRSS----LRSSIGIVLQDTILFS------TTVKENLKYGNPGATDEEIKEAAKLTHS 470 Query: 255 GVII--LDEAHERTLATD 270 I L E +E T+ TD Sbjct: 471 DHFIKHLPEGYE-TVLTD 487 >4Q7L-A nrPDB Length = 256 Score = 31.2 bits (69), Expect = 1.8, Method: Composition-based stats. Identities = 34/138 (24%), Positives = 51/138 (36%), Gaps = 18/138 (13%) Query: 135 LQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGVACTQPR 194 + PV + T + Q LVG TGSGKTT I + + G R Sbjct: 16 KKKPVLK---DITFHIKPGQKVALVGPTGSGKTT-IVNLLMRFYDVDRGQILVDGIDI-R 70 Query: 195 RVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLLERY 254 ++ S + + ++L + +S ++ K LKY G E L Sbjct: 71 KIKRSS----LRSSIGIVLQDTILFS------TTVKENLKYGNPGATDEEIKEAAKLTHS 120 Query: 255 GVII--LDEAHERTLATD 270 I L E +E T+ TD Sbjct: 121 DHFIKHLPEGYE-TVLTD 137 >4A2W-A nrPDB Length = 936 Score = 31.2 bits (69), Expect = 1.9, Method: Composition-based stats. Identities = 27/150 (18%), Positives = 53/150 (35%), Gaps = 14/150 (9%) Query: 125 PRYYDILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGP 184 P Y+ K R Y+ + ++ ++ TGSGKT C + +++P Sbjct: 241 PPVYETKKAR------SYQIELAQPAINGKNALICAPTGSGKTFVSILICEHHFQNMPAG 294 Query: 185 KRGVACTQPRRVAAMSVAQRVADEMDVMLGQEV------GYSIRFEDCSSAKTILKYMTD 238 ++ +V + V G V +S + + + +T Sbjct: 295 RKAKVVFLATKVPVYEQQKNVFKHHFERQGYSVQGISGENFSNVSVEKVIEDSDIIVVTP 354 Query: 239 GMLLREAMNDPL--LERYGVIILDEAHERT 266 +L+ + L L + ++I DE H T Sbjct: 355 QILVNSFEDGTLTSLSIFTLMIFDECHNTT 384 >4A2Q-A nrPDB Length = 797 Score = 31.2 bits (69), Expect = 1.9, Method: Composition-based stats. Identities = 27/150 (18%), Positives = 53/150 (35%), Gaps = 14/150 (9%) Query: 125 PRYYDILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGP 184 P Y+ K R Y+ + ++ ++ TGSGKT C + +++P Sbjct: 241 PPVYETKKAR------SYQIELAQPAINGKNALICAPTGSGKTFVSILICEHHFQNMPAG 294 Query: 185 KRGVACTQPRRVAAMSVAQRVADEMDVMLGQEV------GYSIRFEDCSSAKTILKYMTD 238 ++ +V + V G V +S + + + +T Sbjct: 295 RKAKVVFLATKVPVYEQQKNVFKHHFERQGYSVQGISGENFSNVSVEKVIEDSDIIVVTP 354 Query: 239 GMLLREAMNDPL--LERYGVIILDEAHERT 266 +L+ + L L + ++I DE H T Sbjct: 355 QILVNSFEDGTLTSLSIFTLMIFDECHNTT 384 >3CRV-A nrPDB Length = 551 Score = 30.9 bits (68), Expect = 2.2, Method: Composition-based stats. Identities = 10/27 (37%), Positives = 14/27 (51%) Query: 141 EYKDRFTDILVRHQSFVLVGETGSGKT 167 + KD+ + L + L TGSGKT Sbjct: 10 KLKDKVIEGLRNNFLVALNAPTGSGKT 36 >4A7F-C nrPDB Length = 697 Score = 30.9 bits (68), Expect = 2.3, Method: Composition-based stats. Identities = 17/62 (27%), Positives = 26/62 (41%), Gaps = 12/62 (19%) Query: 116 NPFTNLP---------HTPRY-YDILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSG 165 NPF NL + RY Y++ L Y+ +Q ++ GE+G+G Sbjct: 49 NPFKNLNIYKESDIKAYNGRYKYEMPPHMYALANDAYRS--MRQSQENQCVIISGESGAG 106 Query: 166 KT 167 KT Sbjct: 107 KT 108 >1ZU4-A nrPDB Length = 320 Score = 30.9 bits (68), Expect = 2.6, Method: Composition-based stats. Identities = 26/129 (20%), Positives = 51/129 (39%), Gaps = 15/129 (11%) Query: 497 NTYPEILRSNLGSVVLQLKKLGID-DLVHFDFMDPPAPETLMRALELLNYLAALNDDGDL 555 E +++ L + V +K ++ D F + + +A E L ++ G L Sbjct: 150 QQLEEWIKTRLNNKVDLVKANKLNADPASVVF------DAIKKAKEQNYDLLLIDTAGRL 203 Query: 556 TELGSMMAEFPLDPQLAKM--VIASCDYNCSNEVLSITAMLSVPQCFVRPTEAKKAADEA 613 ++MAE L KM +I + + +EVL + + ++ E K AD + Sbjct: 204 QNKTNLMAE------LEKMNKIIQQVEKSAPHEVLLVIDATTGQNGVIQAEEFSKVADVS 257 Query: 614 KMRFAHIDG 622 + +D Sbjct: 258 GIILTKMDS 266 >1C4O-A nrPDB Length = 664 Score = 30.5 bits (67), Expect = 3.0, Method: Composition-based stats. Identities = 25/112 (22%), Positives = 44/112 (39%), Gaps = 12/112 (10%) Query: 146 FTDILVRHQSFV-LVGETGSGKTTQIPQWCVEYMRSLPGPKRGVACTQPRRVAAMSVAQR 204 + L + FV L+G TG+GKT + + R P ++ A AQ Sbjct: 20 LVEALRDGERFVTLLGATGTGKTVTMAKVI-------EALGRPALVLAPNKILA---AQL 69 Query: 205 VADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLLERYGV 256 A+ ++ V Y I + D + + D + ++A +P +ER Sbjct: 70 AAEFRELFPENAVEYFISYYDYYQPEAYVP-GKDLYIEKDASINPEIERLRH 120 >5L3S-A nrPDB Length = 298 Score = 30.5 bits (67), Expect = 3.3, Method: Composition-based stats. Identities = 19/67 (28%), Positives = 29/67 (43%), Gaps = 10/67 (14%) Query: 155 SFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGVACTQPRRVAAMSVAQRVADEMDVMLG 214 +LVG GSGKTT + + Y G K G+ A V + A + + LG Sbjct: 104 IIMLVGVQGSGKTTTAGK--LAYFYKKRGYKVGLV--------AADVYRPAAYDQLLQLG 153 Query: 215 QEVGYSI 221 ++G + Sbjct: 154 NQIGVQV 160 >1QZX-A nrPDB Length = 440 Score = 30.5 bits (67), Expect = 3.3, Method: Composition-based stats. Identities = 19/67 (28%), Positives = 29/67 (43%), Gaps = 10/67 (14%) Query: 155 SFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGVACTQPRRVAAMSVAQRVADEMDVMLG 214 +LVG GSGKTT + + Y G K G+ A V + A + + LG Sbjct: 106 IIMLVGVQGSGKTTTAGK--LAYFYKKRGYKVGLV--------AADVYRPAAYDQLLQLG 155 Query: 215 QEVGYSI 221 ++G + Sbjct: 156 NQIGVQV 162 >2EYU-A nrPDB Length = 261 Score = 30.1 bits (66), Expect = 3.6, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 27/59 (45%), Gaps = 8/59 (13%) Query: 129 DILKKRLQ-LPVWEYKDRFTDILVRHQSFVLV-GETGSGKTTQIPQWCVEYMRSLPGPK 185 +I + + LP D+ ++ R +LV G TGSGK+T I ++Y+ Sbjct: 4 EIPEFKKLGLP-----DKVLELCHRKMGLILVTGPTGSGKSTTIA-SMIDYINQTKSYH 56 >2EWW-A nrPDB Length = 372 Score = 30.1 bits (66), Expect = 4.0, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 27/59 (45%), Gaps = 8/59 (13%) Query: 129 DILKKRLQ-LPVWEYKDRFTDILVRHQSFVLV-GETGSGKTTQIPQWCVEYMRSLPGPK 185 +I + + LP D+ ++ R +LV G TGSGK+T I ++Y+ Sbjct: 115 EIPEFKKLGLP-----DKVLELCHRKMGLILVTGPTGSGKSTTIA-SMIDYINQTKSYH 167 >5V7Q-T nrPDB Length = 100 Score = 29.3 bits (64), Expect = 7.1, Method: Composition-based stats. Identities = 21/85 (24%), Positives = 40/85 (47%), Gaps = 6/85 (7%) Query: 408 KQNGAIGRKVVVSTNIAETSL-TIDGVVF--VIDPGFAKQKVYNPRIRVESLLVTAISKA 464 A R ++++ I+E S +D V+ ++ P K ++ +I VE + ++ Sbjct: 1 MATLADPRDIILAPVISEKSYGLLDDNVYTFLVRPDSNKTQI---KIAVEKIFAVKVASV 57 Query: 465 SAQQRAGRAGRTRPGKCFRLYTEKA 489 + R G+ RTR G R T++A Sbjct: 58 NTANRQGKRKRTRTGYGKRKSTKRA 82 >1NLZ-A nrPDB Length = 330 Score = 28.9 bits (63), Expect = 8.6, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 29/65 (44%), Gaps = 4/65 (6%) Query: 119 TNLPHTPRYYDILKKRLQLPVWEYK-DRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEY 177 T PH+ +++ L E D + ++ ++ G TGSGKTT I + +E+ Sbjct: 138 TTYPHS--FFEEQGFYNLLDNKEQAISAIKDGIAIGKNVIVCGGTGSGKTTYI-KSIMEF 194 Query: 178 MRSLP 182 + Sbjct: 195 IPKEE 199 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.308 0.128 0.334 Lambda K H 0.267 0.0398 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 28,863,001 Number of Sequences: 36641 Number of extensions: 1117394 Number of successful extensions: 5116 Number of sequences better than 10.0: 134 Number of HSP's better than 10.0 without gapping: 75 Number of HSP's successfully gapped in prelim test: 112 Number of HSP's that attempted gapping in prelim test: 4120 Number of HSP's gapped (non-prelim): 488 length of query: 795 length of database: 10,336,785 effective HSP length: 105 effective length of query: 690 effective length of database: 6,489,480 effective search space: 4477741200 effective search space used: 4477741200 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.2 bits) S2: 63 (28.9 bits)