BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= O33434 (290 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 2C1D-A nrPDB 557 e-159 1H33-A nrPDB 288 2e-78 3OA8-A nrPDB 94 5e-20 4WQD-A nrPDB 42 3e-04 5GUW-M nrPDB 33 0.15 4TR2-A nrPDB 31 0.70 5LO9-A nrPDB 31 0.71 1QDB-A nrPDB 30 1.5 1KB0-A nrPDB 29 1.9 1AOM-A nrPDB 28 4.4 2Q4G-W nrPDB 28 5.1 5WZN-A nrPDB 27 9.6 >2C1D-A nrPDB Length = 264 Score = 557 bits (1435), Expect = e-159, Method: Compositional matrix adjust. Identities = 264/264 (100%), Positives = 264/264 (100%) Query: 27 DPVEDGLVIETDSGPVEIVTKTAPPAFLADTFDTIYSGWHFRDDSTRDLERDDFDNPAMV 86 DPVEDGLVIETDSGPVEIVTKTAPPAFLADTFDTIYSGWHFRDDSTRDLERDDFDNPAMV Sbjct: 1 DPVEDGLVIETDSGPVEIVTKTAPPAFLADTFDTIYSGWHFRDDSTRDLERDDFDNPAMV 60 Query: 87 FVDRGLDKWNAAMGVNGESCASCHQGPESMAGLRAVMPRVDEHTGKLMIMEDYVNACVTE 146 FVDRGLDKWNAAMGVNGESCASCHQGPESMAGLRAVMPRVDEHTGKLMIMEDYVNACVTE Sbjct: 61 FVDRGLDKWNAAMGVNGESCASCHQGPESMAGLRAVMPRVDEHTGKLMIMEDYVNACVTE 120 Query: 147 RMGLEKWGVTSDNMKDMLSLISLQSRGMAVNVKIDGPAAPYWEHGKEIYYTRYGQLEMSC 206 RMGLEKWGVTSDNMKDMLSLISLQSRGMAVNVKIDGPAAPYWEHGKEIYYTRYGQLEMSC Sbjct: 121 RMGLEKWGVTSDNMKDMLSLISLQSRGMAVNVKIDGPAAPYWEHGKEIYYTRYGQLEMSC 180 Query: 207 ANCHEDNAGNMIRADHLSQGQINGFPTYRLKDSGMVTAQHRFVGCVRDTRAETFKAGSDD 266 ANCHEDNAGNMIRADHLSQGQINGFPTYRLKDSGMVTAQHRFVGCVRDTRAETFKAGSDD Sbjct: 181 ANCHEDNAGNMIRADHLSQGQINGFPTYRLKDSGMVTAQHRFVGCVRDTRAETFKAGSDD 240 Query: 267 FKALELYVASRGNGLSVEGVSVRH 290 FKALELYVASRGNGLSVEGVSVRH Sbjct: 241 FKALELYVASRGNGLSVEGVSVRH 264 >1H33-A nrPDB Length = 261 Score = 288 bits (737), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 145/262 (55%), Positives = 178/262 (67%), Gaps = 4/262 (1%) Query: 30 EDGLVIETDSGPVEIVTKTAPPAFLADTFDTIYSGWHFRDDSTRDLERDDFDNPAMVFVD 89 +D LVI +G +EIVT+ PA LAD FD I SGW FR D T+ LE DDF+N MVFV+ Sbjct: 3 DDPLVI---NGEIEIVTRAPTPAHLADRFDEIRSGWTFRTDDTQALEMDDFENSGMVFVE 59 Query: 90 RGLDKWNAAMGVNGESCASCHQG-PESMAGLRAVMPRVDEHTGKLMIMEDYVNACVTERM 148 W+ G G++CA CH + M GLRAV P+ E GK+ +E +NAC T RM Sbjct: 60 EARAVWDRPEGTEGKACADCHGAVDDGMYGLRAVYPKYVESAGKVRTVEQMINACRTSRM 119 Query: 149 GLEKWGVTSDNMKDMLSLISLQSRGMAVNVKIDGPAAPYWEHGKEIYYTRYGQLEMSCAN 208 G +W +M M++LI+ SRGM V+V IDGPA WE G+EIYYTRYGQL++SCA+ Sbjct: 120 GAPEWDYIGPDMTAMVALIASVSRGMPVSVAIDGPAQSTWEKGREIYYTRYGQLDLSCAS 179 Query: 209 CHEDNAGNMIRADHLSQGQINGFPTYRLKDSGMVTAQHRFVGCVRDTRAETFKAGSDDFK 268 CHE + IRADHLSQGQINGFP+YRLK++ + RF GC+RDTR F GS +F Sbjct: 180 CHEQYFDHYIRADHLSQGQINGFPSYRLKNARLNAVHDRFRGCIRDTRGVPFAVGSPEFV 239 Query: 269 ALELYVASRGNGLSVEGVSVRH 290 ALELYVASRGNGLSVEG SVR+ Sbjct: 240 ALELYVASRGNGLSVEGPSVRN 261 >3OA8-A nrPDB Length = 275 Score = 94.4 bits (233), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 71/250 (28%), Positives = 113/250 (45%), Gaps = 30/250 (12%) Query: 69 DDSTRDLER------DDFDNPAMVFVDRGLDKWNAAMGVNGESCASCH--QGPESMAGLR 120 D+S +++ER D NP + VDRG W+ G S +C +GP + G Sbjct: 28 DESEKEIERYRQMIEDPMANPGFLNVDRGEVLWSEPRGTRNVSLETCDLGEGPGKLEGAY 87 Query: 121 AVMPRVDEHTGKLMIMEDYVNACVTERMGLEKW----------GVTSDNMKDMLSLISLQ 170 A +PR TGK+M +E + C+ G + G TSD M+D+++ I+ + Sbjct: 88 AHLPRYFADTGKVMDLEQRLLWCMETIQGRDTKPLVAKPFSGPGRTSD-MEDLVAFIANK 146 Query: 171 SRGMAVNVKIDGPAAP-YWEHGKEIYYTRYGQLEMSCANCHEDNAGNMIRADHLSQGQIN 229 S G+ + V + P + G+ +++ R + SC+ CH AG IR L Q + Sbjct: 147 SDGVKIKVALATPQEKEMYAIGEALFFRRSSINDFSCSTCH-GAAGKRIRLQALPQLDVP 205 Query: 230 G---------FPTYRLKDSGMVTAQHRFVGCVRDTRAETFKAGSDDFKALELYVASRGNG 280 G +PTYR+ S + T QHR C R R S+ AL LY+ + G Sbjct: 206 GKDAQLTMATWPTYRVSQSALRTMQHRMWDCYRQMRMPAPDYASEAVTALTLYLTKQAEG 265 Query: 281 LSVEGVSVRH 290 ++ S++ Sbjct: 266 GELKVPSIKR 275 >4WQD-A nrPDB Length = 252 Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 31/138 (22%), Positives = 50/138 (36%), Gaps = 25/138 (18%) Query: 102 NGESCASCHQGPESMAGLRA----------VMPRVDEHTGKLMIMEDYVNACVTERMGLE 151 NG +C CH G + G A P+ G+L+ +E + C + Sbjct: 45 NGLACRHCHPGRDGEVGTEANAAPFVGVVGRFPQYSARHGRLITLEQRIGDCFERSLNGR 104 Query: 152 KWGVTSDNMKDMLSLISLQSRGMAVNVKIDGPAAPYWE--------HGKEIYYTRYGQLE 203 + + DML+ +S S+G+ V + G P HG+ +Y R Sbjct: 105 ALALDHPALIDMLAYMSWLSQGVPVGAVVAGHGIPTLTLEREPDGVHGEALYQAR----- 159 Query: 204 MSCANCHEDNAGNMIRAD 221 C CH + + AD Sbjct: 160 --CLACHGADGSGTLDAD 175 >5GUW-M nrPDB Length = 568 Score = 33.1 bits (74), Expect = 0.15, Method: Compositional matrix adjust. Identities = 23/102 (22%), Positives = 43/102 (42%), Gaps = 14/102 (13%) Query: 89 DRGLDKWNAAMGVNGESCASCHQGPESMAGLRAVMPRVDEHTGKLMIMEDYVNACVT--E 146 D ++N A + + CA CH A + + P + + G + Y+ A +T Sbjct: 55 DMSESEFNEAKQIYFQRCAGCHGVLRKGATGKPLTPDITQQRG-----QQYLEALITYGT 109 Query: 147 RMGLEKWGVTSDNMKDMLSLISLQSRGMAVNVKIDGPAAPYW 188 +G+ WG + + K+ ++L MA ++ P P W Sbjct: 110 PLGMPNWGSSGELSKEQITL-------MAKYIQHTPPQPPEW 144 >4TR2-A nrPDB Length = 663 Score = 30.8 bits (68), Expect = 0.70, Method: Compositional matrix adjust. Identities = 29/97 (29%), Positives = 43/97 (44%), Gaps = 26/97 (26%) Query: 96 NAAMGVNGESCASCHQGPESMAGLRAVMPRVDEHTGKLMIMEDYVNACV-----TERMGL 150 N +NG S AS H +A + +++ ++ + L I+E NA V TER+ Sbjct: 556 NNYRKLNGTSMASPH-----VAAIASIVRSINPNLTYLQIVEILRNAIVKLPSLTERVS- 609 Query: 151 EKWGVTSDNMKDMLSLISLQSRGMAVNVKIDGPAAPY 187 WG D ++ AVN+ ID AAPY Sbjct: 610 --WGGYVDILR-------------AVNLAIDSKAAPY 631 >5LO9-A nrPDB Length = 526 Score = 30.8 bits (68), Expect = 0.71, Method: Compositional matrix adjust. Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 2/51 (3%) Query: 203 EMSCANCHEDNAGNMIRADHLSQGQINGFPTYRLKDSGMVTAQHRFVGCVR 253 + +CA CH DN G A + + +P YR K+ + T R GC R Sbjct: 284 DQTCAGCHLDN-GRRADASPMWAAWV-AYPAYRGKNQRVDTMAERIQGCFR 332 >1QDB-A nrPDB Length = 473 Score = 29.6 bits (65), Expect = 1.5, Method: Compositional matrix adjust. Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 2/33 (6%) Query: 204 MSCANCHEDNAGNM-IRADHLSQG-QINGFPTY 234 + CANCH+D + +R HL++G Q G T+ Sbjct: 124 IGCANCHDDKTAELKVRVPHLNRGLQAAGLKTF 156 >1KB0-A nrPDB Length = 677 Score = 29.3 bits (64), Expect = 1.9, Method: Compositional matrix adjust. Identities = 16/62 (25%), Positives = 23/62 (37%), Gaps = 4/62 (6%) Query: 205 SCANCHE----DNAGNMIRADHLSQGQINGFPTYRLKDSGMVTAQHRFVGCVRDTRAETF 260 +C CH D GN+ ++ I P + K MV F G + E+ Sbjct: 603 NCVFCHGVPGVDRGGNIPNLGYMDASYIENLPNFVFKGPAMVRGMPDFTGKLSGDDVESL 662 Query: 261 KA 262 KA Sbjct: 663 KA 664 >1AOM-A nrPDB Length = 567 Score = 28.1 bits (61), Expect = 4.4, Method: Compositional matrix adjust. Identities = 23/95 (24%), Positives = 39/95 (41%), Gaps = 15/95 (15%) Query: 94 KWNAAMGVNGESCASCHQGPESMAGLRAVMPRVDEHTGKLMIMEDYVNACVT--ERMGLE 151 ++N A + E CA CH A +A+ P + G DY+ + +T G+ Sbjct: 53 QYNEANKIYFERCAGCHGVLRKGATGKALTPDLTRDLGF-----DYLQSFITYASPAGMP 107 Query: 152 KWGVTSDNMKDMLSLISLQSRGMAVNVKIDGPAAP 186 WG + + +S + + N + PAAP Sbjct: 108 NWGTSGE--------LSAEQVDLMANYLLLDPAAP 134 >2Q4G-W nrPDB Length = 461 Score = 28.1 bits (61), Expect = 5.1, Method: Compositional matrix adjust. Identities = 11/26 (42%), Positives = 17/26 (65%) Query: 143 CVTERMGLEKWGVTSDNMKDMLSLIS 168 C E + LE GVTSDN +D+ +++ Sbjct: 199 CQLEALKLESCGVTSDNCRDLCGIVA 224 >5WZN-A nrPDB Length = 640 Score = 26.9 bits (58), Expect = 9.6, Method: Compositional matrix adjust. Identities = 36/124 (29%), Positives = 51/124 (41%), Gaps = 15/124 (12%) Query: 120 RAVMPRVDEHTGKLMIMEDYVNACVTER---MGLEKWGVTSDNMKDMLSLISLQSRGMAV 176 R V R+ +H I + Y A V ER L + + +++D+L S G+ Sbjct: 219 RVVRYRLLDHADHTAICKTY-RAYVNERGRLRTLAEKAARNPSVRDLLGR-SWVHVGIKT 276 Query: 177 NVKIDG----PAAPYWEHGKEIYYTRYGQLEMSCANCHEDNAGNM-IRADHLSQ-GQING 230 NV+ D PA P GK + Q E HE AG + + D +Q G NG Sbjct: 277 NVQPDSSFYDPAQP----GKNDSLVTFAQRERQMRTLHEMGAGRLYLHLDGWAQPGYDNG 332 Query: 231 FPTY 234 P Y Sbjct: 333 HPDY 336 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 2C1D-A nrPDB 446 e-126 1H33-A nrPDB 415 e-116 3OA8-A nrPDB 298 1e-81 4WQD-A nrPDB 147 5e-36 Sequences not found previously or not previously below threshold: 5LO9-A nrPDB 44 5e-05 1QDB-A nrPDB 32 0.42 4NWK-A nrPDB 31 0.66 4LMH-A nrPDB 30 0.90 5DJQ-C nrPDB 30 1.3 1GU6-A nrPDB 30 1.5 6C2N-A nrPDB 29 2.2 2ZO5-A nrPDB 29 2.6 2F9V-A nrPDB 29 3.7 1KV9-A nrPDB 28 5.5 2Z84-A nrPDB 28 6.3 6AGQ-A nrPDB 27 9.9 >2C1D-A nrPDB Length = 264 Score = 446 bits (1147), Expect = e-126, Method: Composition-based stats. Identities = 264/264 (100%), Positives = 264/264 (100%) Query: 27 DPVEDGLVIETDSGPVEIVTKTAPPAFLADTFDTIYSGWHFRDDSTRDLERDDFDNPAMV 86 DPVEDGLVIETDSGPVEIVTKTAPPAFLADTFDTIYSGWHFRDDSTRDLERDDFDNPAMV Sbjct: 1 DPVEDGLVIETDSGPVEIVTKTAPPAFLADTFDTIYSGWHFRDDSTRDLERDDFDNPAMV 60 Query: 87 FVDRGLDKWNAAMGVNGESCASCHQGPESMAGLRAVMPRVDEHTGKLMIMEDYVNACVTE 146 FVDRGLDKWNAAMGVNGESCASCHQGPESMAGLRAVMPRVDEHTGKLMIMEDYVNACVTE Sbjct: 61 FVDRGLDKWNAAMGVNGESCASCHQGPESMAGLRAVMPRVDEHTGKLMIMEDYVNACVTE 120 Query: 147 RMGLEKWGVTSDNMKDMLSLISLQSRGMAVNVKIDGPAAPYWEHGKEIYYTRYGQLEMSC 206 RMGLEKWGVTSDNMKDMLSLISLQSRGMAVNVKIDGPAAPYWEHGKEIYYTRYGQLEMSC Sbjct: 121 RMGLEKWGVTSDNMKDMLSLISLQSRGMAVNVKIDGPAAPYWEHGKEIYYTRYGQLEMSC 180 Query: 207 ANCHEDNAGNMIRADHLSQGQINGFPTYRLKDSGMVTAQHRFVGCVRDTRAETFKAGSDD 266 ANCHEDNAGNMIRADHLSQGQINGFPTYRLKDSGMVTAQHRFVGCVRDTRAETFKAGSDD Sbjct: 181 ANCHEDNAGNMIRADHLSQGQINGFPTYRLKDSGMVTAQHRFVGCVRDTRAETFKAGSDD 240 Query: 267 FKALELYVASRGNGLSVEGVSVRH 290 FKALELYVASRGNGLSVEGVSVRH Sbjct: 241 FKALELYVASRGNGLSVEGVSVRH 264 >1H33-A nrPDB Length = 261 Score = 415 bits (1067), Expect = e-116, Method: Composition-based stats. Identities = 145/262 (55%), Positives = 178/262 (67%), Gaps = 4/262 (1%) Query: 30 EDGLVIETDSGPVEIVTKTAPPAFLADTFDTIYSGWHFRDDSTRDLERDDFDNPAMVFVD 89 +D LVI +G +EIVT+ PA LAD FD I SGW FR D T+ LE DDF+N MVFV+ Sbjct: 3 DDPLVI---NGEIEIVTRAPTPAHLADRFDEIRSGWTFRTDDTQALEMDDFENSGMVFVE 59 Query: 90 RGLDKWNAAMGVNGESCASCHQG-PESMAGLRAVMPRVDEHTGKLMIMEDYVNACVTERM 148 W+ G G++CA CH + M GLRAV P+ E GK+ +E +NAC T RM Sbjct: 60 EARAVWDRPEGTEGKACADCHGAVDDGMYGLRAVYPKYVESAGKVRTVEQMINACRTSRM 119 Query: 149 GLEKWGVTSDNMKDMLSLISLQSRGMAVNVKIDGPAAPYWEHGKEIYYTRYGQLEMSCAN 208 G +W +M M++LI+ SRGM V+V IDGPA WE G+EIYYTRYGQL++SCA+ Sbjct: 120 GAPEWDYIGPDMTAMVALIASVSRGMPVSVAIDGPAQSTWEKGREIYYTRYGQLDLSCAS 179 Query: 209 CHEDNAGNMIRADHLSQGQINGFPTYRLKDSGMVTAQHRFVGCVRDTRAETFKAGSDDFK 268 CHE + IRADHLSQGQINGFP+YRLK++ + RF GC+RDTR F GS +F Sbjct: 180 CHEQYFDHYIRADHLSQGQINGFPSYRLKNARLNAVHDRFRGCIRDTRGVPFAVGSPEFV 239 Query: 269 ALELYVASRGNGLSVEGVSVRH 290 ALELYVASRGNGLSVEG SVR+ Sbjct: 240 ALELYVASRGNGLSVEGPSVRN 261 >3OA8-A nrPDB Length = 275 Score = 298 bits (764), Expect = 1e-81, Method: Composition-based stats. Identities = 71/250 (28%), Positives = 113/250 (45%), Gaps = 30/250 (12%) Query: 69 DDSTRDLER------DDFDNPAMVFVDRGLDKWNAAMGVNGESCASCH--QGPESMAGLR 120 D+S +++ER D NP + VDRG W+ G S +C +GP + G Sbjct: 28 DESEKEIERYRQMIEDPMANPGFLNVDRGEVLWSEPRGTRNVSLETCDLGEGPGKLEGAY 87 Query: 121 AVMPRVDEHTGKLMIMEDYVNACVTERMGLEKW----------GVTSDNMKDMLSLISLQ 170 A +PR TGK+M +E + C+ G + G TSD M+D+++ I+ + Sbjct: 88 AHLPRYFADTGKVMDLEQRLLWCMETIQGRDTKPLVAKPFSGPGRTSD-MEDLVAFIANK 146 Query: 171 SRGMAVNVKIDGPAAP-YWEHGKEIYYTRYGQLEMSCANCHEDNAGNMIRADHLSQGQIN 229 S G+ + V + P + G+ +++ R + SC+ CH AG IR L Q + Sbjct: 147 SDGVKIKVALATPQEKEMYAIGEALFFRRSSINDFSCSTCHGA-AGKRIRLQALPQLDVP 205 Query: 230 G---------FPTYRLKDSGMVTAQHRFVGCVRDTRAETFKAGSDDFKALELYVASRGNG 280 G +PTYR+ S + T QHR C R R S+ AL LY+ + G Sbjct: 206 GKDAQLTMATWPTYRVSQSALRTMQHRMWDCYRQMRMPAPDYASEAVTALTLYLTKQAEG 265 Query: 281 LSVEGVSVRH 290 ++ S++ Sbjct: 266 GELKVPSIKR 275 >4WQD-A nrPDB Length = 252 Score = 147 bits (371), Expect = 5e-36, Method: Composition-based stats. Identities = 31/138 (22%), Positives = 50/138 (36%), Gaps = 25/138 (18%) Query: 102 NGESCASCHQGPESMAGLRA----------VMPRVDEHTGKLMIMEDYVNACVTERMGLE 151 NG +C CH G + G A P+ G+L+ +E + C + Sbjct: 45 NGLACRHCHPGRDGEVGTEANAAPFVGVVGRFPQYSARHGRLITLEQRIGDCFERSLNGR 104 Query: 152 KWGVTSDNMKDMLSLISLQSRGMAVNVKIDGPAAPYWE--------HGKEIYYTRYGQLE 203 + + DML+ +S S+G+ V + G P HG+ +Y R Sbjct: 105 ALALDHPALIDMLAYMSWLSQGVPVGAVVAGHGIPTLTLEREPDGVHGEALYQAR----- 159 Query: 204 MSCANCHEDNAGNMIRAD 221 C CH + + AD Sbjct: 160 --CLACHGADGSGTLDAD 175 Score = 35.1 bits (79), Expect = 0.033, Method: Composition-based stats. Identities = 22/127 (17%), Positives = 39/127 (30%), Gaps = 18/127 (14%) Query: 175 AVNVKIDGPAAPYW---EHGKEIYYTRYGQLE------------MSCANCHED-NAGNMI 218 V + PAA G+ I R + ++C +CH + Sbjct: 3 PPTVALTVPAAALLPDGALGESIVRGRRYLSDTPAQLPDFVGNGLACRHCHPGRDGEVGT 62 Query: 219 RADHLSQGQING-FPTYRLKDSGMVTAQHRFVGCV-RDTRAETFKAGSDDFKALELYVAS 276 A+ + G FP Y + ++T + R C R + Y++ Sbjct: 63 EANAAPFVGVVGRFPQYSARHGRLITLEQRIGDCFERSLNGRALALDHPALIDMLAYMSW 122 Query: 277 RGNGLSV 283 G+ V Sbjct: 123 LSQGVPV 129 >5LO9-A nrPDB Length = 526 Score = 44.3 bits (103), Expect = 5e-05, Method: Composition-based stats. Identities = 22/138 (15%), Positives = 39/138 (28%), Gaps = 15/138 (10%) Query: 96 NAAMGVNGESCASCHQGPES------MAGLRAVMPRVDEHTGKLMIMEDYVNACVTERMG 149 +A N ++CA CH M P ++ M + + C M Sbjct: 277 SAPHVGNDQTCAGCHLDNGRRADASPMWAAWVAYPAYRGKNQRVDTMAERIQGCFRYSMN 336 Query: 150 LEKW------GVTSDNMKDMLSLISLQSRGMAVN-VKIDGPAAPYWEHGKEIYYTRYGQL 202 + + + S I + G + G P + E + G Sbjct: 337 AQDSVSGQVPETNGLVLDALQSYIFWLATGAPTGDTAMSGRGYPRLQPPAEGFDRTRGAA 396 Query: 203 EMS--CANCHEDNAGNMI 218 + CA CH ++ Sbjct: 397 LYAEHCALCHGAEGEGLL 414 Score = 38.2 bits (87), Expect = 0.005, Method: Composition-based stats. Identities = 18/53 (33%), Positives = 23/53 (43%), Gaps = 4/53 (7%) Query: 202 LEMSCANCHEDNAGNMIRADHLSQGQI-NGFPTYRLKDSGMVTAQHRFVGCVR 253 + +CA CH DN RAD +P YR K+ + T R GC R Sbjct: 283 NDQTCAGCHLDNGR---RADASPMWAAWVAYPAYRGKNQRVDTMAERIQGCFR 332 >1QDB-A nrPDB Length = 473 Score = 31.6 bits (70), Expect = 0.42, Method: Composition-based stats. Identities = 28/117 (23%), Positives = 41/117 (35%), Gaps = 10/117 (8%) Query: 120 RAVMPRVDEHTGKLMIMEDYVNACVTERMGLEKWGVTSDNMKDMLSLISLQSRGMAVNVK 179 A + G ++D VN+ T G T L + V Sbjct: 48 YAFSKDYNSPRGHYYALQDNVNSLRT---GAPVDAKTGP-----LPTACWTCKSPDVPRL 99 Query: 180 IDGPAAPYWEHGKEIYYTRYGQLEMSCANCHED-NAGNMIRADHLSQG-QINGFPTY 234 I+ + GK Y + CANCH+D A +R HL++G Q G T+ Sbjct: 100 IEEDGELEYFTGKWAKYGSQIVNVIGCANCHDDKTAELKVRVPHLNRGLQAAGLKTF 156 Score = 29.7 bits (65), Expect = 1.5, Method: Composition-based stats. Identities = 21/88 (23%), Positives = 33/88 (37%), Gaps = 15/88 (17%) Query: 58 FDTI-YSGWHFRDDSTRDLERDDFDNPAMVFVDRGLDKWNAAMGVNGESCASCHQGPESM 116 +D I +S W T L+ +P F G+ G G SCA CH P + Sbjct: 219 YDEINFSDWTHNISKTPMLKA---QHPGFEFWKSGI------HGQKGVSCADCHM-PYTQ 268 Query: 117 AGLRAVMPRVDEHTGKLMIMEDYVNACV 144 G + +H K ++ +C+ Sbjct: 269 EGSV----KYSDHQVKENPLDSMDQSCM 292 >4NWK-A nrPDB Length = 219 Score = 30.9 bits (68), Expect = 0.66, Method: Composition-based stats. Identities = 20/74 (27%), Positives = 30/74 (40%), Gaps = 9/74 (12%) Query: 40 GPVEIVTKTAPPAFLADTFD----TIYSGWHFRDDSTRDLERDDFDNPAMVFVDRGLDKW 95 G V+IV+ TA FLA + + T+Y G R ++ VD+ L W Sbjct: 46 GEVQIVS-TATQTFLATSINGVLWTVYHGAGTRTIASPKGPVTQM----YTNVDKDLVGW 100 Query: 96 NAAMGVNGESCASC 109 A G + +C Sbjct: 101 QAPQGSRSLTPCTC 114 >4LMH-A nrPDB Length = 760 Score = 30.5 bits (67), Expect = 0.90, Method: Composition-based stats. Identities = 32/130 (24%), Positives = 50/130 (38%), Gaps = 31/130 (23%) Query: 104 ESCASCHQGPESMAGLRAVMPRVDEHTGKLMIMEDYVNACVTERMGLEKWGVTSDNMKDM 163 ++C +CHQ PES+A H G+ + +E+ +C T G + G N + Sbjct: 221 QACYTCHQ-PESLA----------LHGGRRIDIEN-CASCHTATSGDPESG----NSIEF 264 Query: 164 LSLISLQSRG------------MAVNVKIDGPAAPYWEHGKEIYYTRYGQLEMSCANCHE 211 +I +G + KI G ++GK Y + CA CH Sbjct: 265 TYMIHAIHKGGERHTFDATGAQVPAPYKIIGYGGKVIDYGKVHYPQKPAA---DCAACHV 321 Query: 212 DNAGNMIRAD 221 + AG AD Sbjct: 322 EGAGAPANAD 331 >5DJQ-C nrPDB Length = 311 Score = 30.1 bits (66), Expect = 1.3, Method: Composition-based stats. Identities = 37/225 (16%), Positives = 67/225 (29%), Gaps = 28/225 (12%) Query: 64 GWHFRDDSTRDLERDD------FDNPAMVFVDR-GLDKWNAAMGVNGES--CASCHQGP- 113 GW R++ + D F A + V+ D MG + C+ CH Sbjct: 92 GWTQEKQWEREVAQADEKYGPIFAKYAAMSVEEVAQDPQAVKMGARLFANYCSICHGSDA 151 Query: 114 ESMAGLRAVMPRVDEHTGKLMIMEDYVNACVTERMGLEKWGVTSDNMKDMLSLISLQSRG 173 + G + + G ++ + M + + +K++ + + G Sbjct: 152 KGSLGFPNLADQDWRWGGDAASIKTSILNGRIAAMPAWGQAIGEEGVKNVAAFVRKDLAG 211 Query: 174 MAVNVKIDGPAAPYWEHGKEIYYTRYGQLEMSCANCHEDNAGNMIRADHLSQGQINGFPT 233 + + D GK +Y +CA CH M G+ Sbjct: 212 LPLPEGTDAD----LSAGKNVYAQ-------TCAVCHGQGGEGMAALGAPKLNSAAGW-- 258 Query: 234 YRLKDSGMVTAQHRFVGCVRDTRAETFK--AGSDDFKALELYVAS 276 + S + Q R+ + + G D L YV S Sbjct: 259 --IYGSSLGQLQQTIRHG-RNGQMPAQQQYLGDDKVHLLAAYVYS 300 >1GU6-A nrPDB Length = 452 Score = 29.7 bits (65), Expect = 1.5, Method: Composition-based stats. Identities = 28/162 (17%), Positives = 44/162 (27%), Gaps = 39/162 (24%) Query: 94 KWNA--AMGVNGESCASCHQGPESM-------------AGLRAV--MPRVDEHTGKLMIM 136 KW VN CA CH RA+ + + E G+ Sbjct: 120 KWARGGPEIVNNLGCADCHNTASPEFAKGKPELTLSRPYAARAMEAIGKPFEKAGRFDQQ 179 Query: 137 EDYVNAC-VTERMGLEKWGVTSD--------NMK---DMLSLISLQSRGMAVNVKIDGPA 184 C V + V NM+ D ++ + + Sbjct: 180 SMVCGQCHVEYYFDGKNKAVKFPWDDGMKVENMEQYYDKIAFSDWTNSLSKTPMLKAQHP 239 Query: 185 A-PYWEHGKEIYYTRYGQLEMSCANCHE---DNAGNMIRADH 222 W G +G+ ++C +CH NA + DH Sbjct: 240 EYETWTAGI------HGKNNVTCIDCHMPKVQNAEGKLYTDH 275 >6C2N-A nrPDB Length = 203 Score = 29.3 bits (64), Expect = 2.2, Method: Composition-based stats. Identities = 19/74 (25%), Positives = 30/74 (40%), Gaps = 9/74 (12%) Query: 40 GPVEIVTKTAPPAFLADTFD----TIYSGWHFRDDSTRDLERDDFDNPAMVFVDRGLDKW 95 G V+IV+ TA FLA + + T++ G R ++ VD+ L W Sbjct: 52 GEVQIVS-TATQTFLATSINGVLWTVHHGAGTRTIASPKGPVTQM----YTNVDKDLVGW 106 Query: 96 NAAMGVNGESCASC 109 A G + +C Sbjct: 107 QAPQGSRSLTPCTC 120 >2ZO5-A nrPDB Length = 525 Score = 28.9 bits (63), Expect = 2.6, Method: Composition-based stats. Identities = 12/46 (26%), Positives = 16/46 (34%), Gaps = 12/46 (26%) Query: 90 RGLDKWNAAMGVNGESCASCHQGPESMAGLRAVMPRVDEHTGKLMI 135 W + NG +CA CH MP+V GK+ Sbjct: 363 EAETFWGSVHERNGVACADCH------------MPKVQLENGKVYT 396 >2F9V-A nrPDB Length = 201 Score = 28.6 bits (62), Expect = 3.7, Method: Composition-based stats. Identities = 20/74 (27%), Positives = 29/74 (39%), Gaps = 9/74 (12%) Query: 40 GPVEIVTKTAPPAFLADTFD----TIYSGWHFRDDSTRDLERDDFDNPAMVFVDRGLDKW 95 G V+IV+ TA FLA + T+Y G R ++ VD+ L W Sbjct: 43 GEVQIVS-TATQTFLATCINGVCWTVYHGAGTRTIASPKGPVIQM----YTNVDQDLVGW 97 Query: 96 NAAMGVNGESCASC 109 A G + +C Sbjct: 98 PAPQGSRSLTPCTC 111 >1KV9-A nrPDB Length = 668 Score = 27.8 bits (60), Expect = 5.5, Method: Composition-based stats. Identities = 14/113 (12%), Positives = 30/113 (26%), Gaps = 7/113 (6%) Query: 79 DFDNPAMVFVDRGLDKWNAAMGVNGESCASCHQGPESMAGLRAVMPRVDEHTGKLMIMED 138 + P + + + W + G + S + G + +P V + GK + Sbjct: 358 PVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRK 417 Query: 139 YVNACVTERMGLEKWGVTSDNMKDMLSLISLQSRGMAVNVKIDGPAAPYWEHG 191 N +L++ + P +W G Sbjct: 418 AFN-----TAAGFADATDVPAAVVSGALLAW--DPVKQKAAWKVPYPTHWNGG 463 Score = 27.4 bits (59), Expect = 8.6, Method: Composition-based stats. Identities = 8/49 (16%), Positives = 14/49 (28%), Gaps = 7/49 (14%) Query: 114 ESMAGLRAVMPRVDEHTGKLMIMEDYVNACVTERMGLEKWGVTSDNMKD 162 + G+R + D TGKL G +++ Sbjct: 171 GAEYGVRGFVSAYDADTGKL-------AWRFYTVPGDPALPYEHPELRE 212 >2Z84-A nrPDB Length = 218 Score = 27.8 bits (60), Expect = 6.3, Method: Composition-based stats. Identities = 23/133 (17%), Positives = 37/133 (27%), Gaps = 12/133 (9%) Query: 151 EKWGVTSDNMKDMLSLISLQSRGMAVNVKIDGPAAPYWEHGKEIYYTRYGQLEMSCANCH 210 WG ++ + S QS G+ + G + +R + + C Sbjct: 44 RGWGCGYRTLQTLCSWPGGQSSGVPGLPALQGALEAMGDKPPGFRGSRNWIGCVEASLCL 103 Query: 211 EDNAGNMIRADHLSQGQINGFPTYRLKDSGMVTAQHRFVGCVRDTRAETFKAGSDDFKAL 270 E G R HL +G G+ + R G D ++ Sbjct: 104 EHFGGPQGRLCHLPRG------------VGLRGEEERLYSHFTTGGGPVMVGGDADAQSK 151 Query: 271 ELYVASRGNGLSV 283 L G G V Sbjct: 152 ALLGICEGPGSEV 164 >6AGQ-A nrPDB Length = 321 Score = 27.0 bits (58), Expect = 9.9, Method: Composition-based stats. Identities = 9/42 (21%), Positives = 15/42 (35%) Query: 212 DNAGNMIRADHLSQGQINGFPTYRLKDSGMVTAQHRFVGCVR 253 G QG I G+ T + D + ++ C+R Sbjct: 122 GQGGVTPDRAEYPQGGIPGWMTLGILDPASYYYKQVYLDCIR 163 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.309 0.128 0.352 Lambda K H 0.267 0.0395 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 10,751,533 Number of Sequences: 36641 Number of extensions: 416090 Number of successful extensions: 1162 Number of sequences better than 10.0: 18 Number of HSP's better than 10.0 without gapping: 13 Number of HSP's successfully gapped in prelim test: 18 Number of HSP's that attempted gapping in prelim test: 1112 Number of HSP's gapped (non-prelim): 44 length of query: 290 length of database: 10,336,785 effective HSP length: 96 effective length of query: 194 effective length of database: 6,819,249 effective search space: 1322934306 effective search space used: 1322934306 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.3 bits) S2: 58 (27.0 bits)