BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.


Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= O25896
         (148 letters)

Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 
           36,641 sequences; 10,336,785 total letters

Searching..................................................done


Results from round 1


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

2WVD-A nrPDB                                                          303   3e-83
2BJ9-A nrPDB                                                           98   1e-21
2HZA-A nrPDB                                                           65   1e-11
4P7D-A nrPDB                                                           38   0.002
5W2G-A nrPDB                                                           27   4.0  
4PCD-A nrPDB                                                           27   4.7  
5O2C-A nrPDB                                                           26   5.3  
3AMK-A nrPDB                                                           26   5.7  
6FBK-A nrPDB                                                           26   6.4  
4IEI-A nrPDB                                                           26   8.0  
4GAX-A nrPDB                                                           25   8.5  
5UCV-A nrPDB                                                           25   9.0  
4A61-A nrPDB                                                           25   9.3  

>2WVD-A nrPDB
          Length = 148

 Score =  303 bits (775), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 147/148 (99%), Positives = 147/148 (99%)

Query: 1   MDTPNKDDSIIRFSVSLQQNLLDELDNRIIKNGYSSRSELVRDMIREKLVEDNWAEDNPN 60
           MDTPNKDDSIIRFSVSLQQNLLDELDNRIIKNGYSSRSELVRDMIREKLVEDNWAEDNPN
Sbjct: 1   MDTPNKDDSIIRFSVSLQQNLLDELDNRIIKNGYSSRSELVRDMIREKLVEDNWAEDNPN 60

Query: 61  DESKIAVLVVIYDHHQRELNQRMIDIQHASGTHVLCTTHIHMDEHNCLETIILQGNSFEI 120
           DESKIAVLVVIYDHHQRELNQRMIDIQHASGTHVL TTHIHMDEHNCLETIILQGNSFEI
Sbjct: 61  DESKIAVLVVIYDHHQRELNQRMIDIQHASGTHVLSTTHIHMDEHNCLETIILQGNSFEI 120

Query: 121 QRLQLEIGGLRGVKFAKLTKASSFEYNE 148
           QRLQLEIGGLRGVKFAKLTKASSFEYNE
Sbjct: 121 QRLQLEIGGLRGVKFAKLTKASSFEYNE 148


>2BJ9-A nrPDB
          Length = 138

 Score = 97.8 bits (242), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 46/134 (34%), Positives = 84/134 (62%), Gaps = 3/134 (2%)

Query: 10  IIRFSVSLQQNLLDELDNRIIKNGYSSRSELVRDMIREKLVEDNWAEDNPNDESKIAVLV 69
           +IRFS+S+   LL++ D  I + GY +RSE +RD+IR+ ++   W   N   E     + 
Sbjct: 3   LIRFSISIPSKLLEKFDQIIEEIGYENRSEAIRDLIRDFIIRHEWEVGN---EEVAGTIT 59

Query: 70  VIYDHHQRELNQRMIDIQHASGTHVLCTTHIHMDEHNCLETIILQGNSFEIQRLQLEIGG 129
           ++Y+H + ++ + ++D+QH     ++ + H+HMDEHNCLE I+++G + +I+ +  ++  
Sbjct: 60  IVYNHDEGDVVKALLDLQHEYLDEIISSLHVHMDEHNCLEVIVVKGEAKKIKMIADKLLS 119

Query: 130 LRGVKFAKLTKASS 143
           L+GVK  KL   S+
Sbjct: 120 LKGVKHGKLVMTST 133


>2HZA-A nrPDB
          Length = 133

 Score = 65.1 bits (157), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 60/108 (55%), Gaps = 3/108 (2%)

Query: 31  KNGYSSRSELVRDMIREKLVEDNWAEDNPNDESKIAVLVVIYDHHQRELNQRMIDIQHAS 90
           + GY++RSE +RD++R  L ++   +         AVL  +Y+H +R+L  R++  QH  
Sbjct: 22  RRGYNNRSEAIRDILRSALAQEATQQHGTQ---GFAVLSYVYEHEKRDLASRIVSTQHHH 78

Query: 91  GTHVLCTTHIHMDEHNCLETIILQGNSFEIQRLQLEIGGLRGVKFAKL 138
               + T H+H++  +CLE  +L+G+  ++Q    ++   RGV+   L
Sbjct: 79  HDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRGVRHGHL 126


>4P7D-A nrPDB
          Length = 143

 Score = 38.1 bits (87), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 16/51 (31%), Positives = 32/51 (62%), Gaps = 1/51 (1%)

Query: 1   MDTPNKDDSIIRFSVSLQQNLLDELDNRIIKN-GYSSRSELVRDMIREKLV 50
           +D    +   ++F++++ QNLL  +D  I  N GY +RS+ + ++ REK++
Sbjct: 84  IDPAKYESKAVKFNLTMSQNLLTAIDKFIATNRGYKNRSQFLAELAREKII 134


>5W2G-A nrPDB
          Length = 257

 Score = 26.6 bits (57), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 22/100 (22%), Positives = 45/100 (45%), Gaps = 9/100 (9%)

Query: 13  FSVSLQQNLLDELDNRIIKNGYSSRSELVRDMIR--EKLVEDNWAEDNPNDESKIAVLVV 70
           +  SL +  + +  +R   NGY  R + V   I+  EK+++  W E+        + L+ 
Sbjct: 149 YGRSLTKETIKDGVSRFFHNGYCLRKDAVAASIQKIEKILQ--WFENQKQLNFYASSLLF 206

Query: 71  IYD-----HHQRELNQRMIDIQHASGTHVLCTTHIHMDEH 105
           +Y+         E+  RMID  H   ++ +   +++  +H
Sbjct: 207 VYEGSSQGGSGGEVEVRMIDFAHVFPSNTIDEGYVYGLKH 246


>4PCD-A nrPDB
          Length = 322

 Score = 26.6 bits (57), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 17/73 (23%), Positives = 33/73 (45%), Gaps = 9/73 (12%)

Query: 16  SLQQNLLDELDNRII---------KNGYSSRSELVRDMIREKLVEDNWAEDNPNDESKIA 66
           SLQ  ++D  +N +            GY +++E VR  I   + E  WA+ + +D++ + 
Sbjct: 197 SLQNGVIDGQENPLALIRSANFNEVQGYVNQTEHVRSWIYLTIAESTWAKLSEDDQNAVM 256

Query: 67  VLVVIYDHHQREL 79
                   ++R L
Sbjct: 257 QAAATAQEYERGL 269


>5O2C-A nrPDB
          Length = 380

 Score = 26.2 bits (56), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 14/48 (29%), Positives = 29/48 (60%), Gaps = 2/48 (4%)

Query: 5   NKDDSIIRFSVSLQQNLLDELDNRIIKNGY--SSRSELVRDMIREKLV 50
           +KD+  I FS +L+ +  +E+   ++K+G+   S S+ V   IR+++ 
Sbjct: 322 HKDNEAIEFSFNLETDTPEEVAYEMVKSGFFHESDSKAVAKSIRDRVT 369


>3AMK-A nrPDB
          Length = 702

 Score = 26.2 bits (56), Expect = 5.7,   Method: Composition-based stats.
 Identities = 19/81 (23%), Positives = 39/81 (48%), Gaps = 2/81 (2%)

Query: 12  RFSVSLQQNLLDELDNRIIKNGYSSRSELVRDMIREKLVEDNWAEDNPNDESKIAVLVVI 71
           R ++++    +D L N+  ++   S SE+V+ +   +  E   A    +D+S +    + 
Sbjct: 421 RLAMAIPDRWIDYLKNK--EDRKWSMSEIVQTLTNRRYTEKCIAYAESHDQSIVGDKTIA 478

Query: 72  YDHHQRELNQRMIDIQHASGT 92
           +    +E+   M D+Q AS T
Sbjct: 479 FLLMDKEMYTGMSDLQPASPT 499


>6FBK-A nrPDB
          Length = 98

 Score = 26.2 bits (56), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 14/51 (27%), Positives = 28/51 (54%), Gaps = 2/51 (3%)

Query: 6  KDDSIIRFSVSLQQNLLDELDNRIIKNGYSSRSE--LVRDMIREKLVEDNW 54
          KD+  I F+  L++   DE+   +I++G+   S+  +V   IR+++    W
Sbjct: 40 KDNGAIEFTFDLEKETPDEVAQEMIESGFFHESDVKIVAKSIRDRVALIQW 90


>4IEI-A nrPDB
          Length = 490

 Score = 25.8 bits (55), Expect = 8.0,   Method: Composition-based stats.
 Identities = 11/31 (35%), Positives = 20/31 (64%)

Query: 16  SLQQNLLDELDNRIIKNGYSSRSELVRDMIR 46
           S+  +++  L++ I + GYS+  E+ R MIR
Sbjct: 76  SISDSVIRLLEDTIEREGYSAEFEIQRSMIR 106


>4GAX-A nrPDB
          Length = 563

 Score = 25.4 bits (54), Expect = 8.5,   Method: Compositional matrix adjust.
 Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 2/41 (4%)

Query: 32  NGYSSRSELVRDMIREKLVEDNWAEDN--PNDESKIAVLVV 70
           N ++   E V+D +R  +VE  WA +   P  E   +V V+
Sbjct: 375 NIFNCGKEFVKDFVRNLMVEAQWANEGHIPTTEELDSVAVI 415


>5UCV-A nrPDB
          Length = 217

 Score = 25.4 bits (54), Expect = 9.0,   Method: Compositional matrix adjust.
 Identities = 15/48 (31%), Positives = 28/48 (58%), Gaps = 4/48 (8%)

Query: 68  LVVIYD--HHQRELNQRMIDIQHASG--THVLCTTHIHMDEHNCLETI 111
           LV+I D  H  +EL+ RM+D  H +G   H+L +    + ++  ++T+
Sbjct: 117 LVLIMDARHPLKELDIRMLDFFHTTGRPVHILLSKADKLSKNEQIKTL 164


>4A61-A nrPDB
          Length = 326

 Score = 25.4 bits (54), Expect = 9.3,   Method: Compositional matrix adjust.
 Identities = 13/48 (27%), Positives = 29/48 (60%), Gaps = 2/48 (4%)

Query: 51  EDNWAEDNPNDESKIAVLVVIYDHHQRELNQRMIDI--QHASGTHVLC 96
           ++N+ +   NDE+KI+++    +   R+L QR+++   + +  THV+ 
Sbjct: 237 DNNYLKQRINDENKISIVTEAMNEALRKLEQRVLNTLNEFSGYTHVMV 284


Searching..................................................done


Results from round 2


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value
Sequences used in model and found again:

2WVD-A nrPDB                                                          212   4e-56
2BJ9-A nrPDB                                                          167   2e-42
2HZA-A nrPDB                                                          134   1e-32
4P7D-A nrPDB                                                           73   5e-14

Sequences not found previously or not previously below threshold:

3GZU-C nrPDB                                                           31   0.24 
4QRO-A nrPDB                                                           29   0.99 
1MQS-A nrPDB                                                           28   1.1  
6ER9-A nrPDB                                                           27   2.7  
1G5T-A nrPDB                                                           27   3.8  
2BVF-A nrPDB                                                           27   4.4  
5W2G-A nrPDB                                                           26   5.0  
5XOZ-A nrPDB                                                           26   5.2  
4GAX-A nrPDB                                                           26   8.0  
4OT9-A nrPDB                                                           25   8.5  
2PG7-A nrPDB                                                           25   9.8  


CONVERGED!
>2WVD-A nrPDB
          Length = 148

 Score =  212 bits (540), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 147/148 (99%), Positives = 147/148 (99%)

Query: 1   MDTPNKDDSIIRFSVSLQQNLLDELDNRIIKNGYSSRSELVRDMIREKLVEDNWAEDNPN 60
           MDTPNKDDSIIRFSVSLQQNLLDELDNRIIKNGYSSRSELVRDMIREKLVEDNWAEDNPN
Sbjct: 1   MDTPNKDDSIIRFSVSLQQNLLDELDNRIIKNGYSSRSELVRDMIREKLVEDNWAEDNPN 60

Query: 61  DESKIAVLVVIYDHHQRELNQRMIDIQHASGTHVLCTTHIHMDEHNCLETIILQGNSFEI 120
           DESKIAVLVVIYDHHQRELNQRMIDIQHASGTHVL TTHIHMDEHNCLETIILQGNSFEI
Sbjct: 61  DESKIAVLVVIYDHHQRELNQRMIDIQHASGTHVLSTTHIHMDEHNCLETIILQGNSFEI 120

Query: 121 QRLQLEIGGLRGVKFAKLTKASSFEYNE 148
           QRLQLEIGGLRGVKFAKLTKASSFEYNE
Sbjct: 121 QRLQLEIGGLRGVKFAKLTKASSFEYNE 148


>2BJ9-A nrPDB
          Length = 138

 Score =  167 bits (423), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 46/135 (34%), Positives = 84/135 (62%), Gaps = 3/135 (2%)

Query: 9   SIIRFSVSLQQNLLDELDNRIIKNGYSSRSELVRDMIREKLVEDNWAEDNPNDESKIAVL 68
            +IRFS+S+   LL++ D  I + GY +RSE +RD+IR+ ++   W   N   E     +
Sbjct: 2   ELIRFSISIPSKLLEKFDQIIEEIGYENRSEAIRDLIRDFIIRHEWEVGN---EEVAGTI 58

Query: 69  VVIYDHHQRELNQRMIDIQHASGTHVLCTTHIHMDEHNCLETIILQGNSFEIQRLQLEIG 128
            ++Y+H + ++ + ++D+QH     ++ + H+HMDEHNCLE I+++G + +I+ +  ++ 
Sbjct: 59  TIVYNHDEGDVVKALLDLQHEYLDEIISSLHVHMDEHNCLEVIVVKGEAKKIKMIADKLL 118

Query: 129 GLRGVKFAKLTKASS 143
            L+GVK  KL   S+
Sbjct: 119 SLKGVKHGKLVMTST 133


>2HZA-A nrPDB
          Length = 133

 Score =  134 bits (337), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 32/108 (29%), Positives = 60/108 (55%), Gaps = 3/108 (2%)

Query: 31  KNGYSSRSELVRDMIREKLVEDNWAEDNPNDESKIAVLVVIYDHHQRELNQRMIDIQHAS 90
           + GY++RSE +RD++R  L ++   +         AVL  +Y+H +R+L  R++  QH  
Sbjct: 22  RRGYNNRSEAIRDILRSALAQEATQQHGTQ---GFAVLSYVYEHEKRDLASRIVSTQHHH 78

Query: 91  GTHVLCTTHIHMDEHNCLETIILQGNSFEIQRLQLEIGGLRGVKFAKL 138
               + T H+H++  +CLE  +L+G+  ++Q    ++   RGV+   L
Sbjct: 79  HDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRGVRHGHL 126


>4P7D-A nrPDB
          Length = 143

 Score = 72.8 bits (177), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 16/51 (31%), Positives = 32/51 (62%), Gaps = 1/51 (1%)

Query: 1   MDTPNKDDSIIRFSVSLQQNLLDELDNRIIKN-GYSSRSELVRDMIREKLV 50
           +D    +   ++F++++ QNLL  +D  I  N GY +RS+ + ++ REK++
Sbjct: 84  IDPAKYESKAVKFNLTMSQNLLTAIDKFIATNRGYKNRSQFLAELAREKII 134


>3GZU-C nrPDB
          Length = 397

 Score = 30.8 bits (68), Expect = 0.24,   Method: Composition-based stats.
 Identities = 23/133 (17%), Positives = 50/133 (37%), Gaps = 1/133 (0%)

Query: 16  SLQQNLLDELDNRIIKNGYSSRSELVRDMIREKLVEDNWAEDNPNDESKIAVLVVIYDHH 75
           SL + L D  D  +    YS+ S+L++    + ++  N  E        + +    +D  
Sbjct: 6   SLSKTLKDARDKIVEGTLYSNVSDLIQQF-NQMIITMNGNEFQTGGIGNLPIRNWNFDFG 64

Query: 76  QRELNQRMIDIQHASGTHVLCTTHIHMDEHNCLETIILQGNSFEIQRLQLEIGGLRGVKF 135
                   +D  +           +   ++ C++ ++ +     I      +  L G+KF
Sbjct: 65  LLGTTLLNLDANYVETARNTIDYFVDFVDNVCMDEMVRESQRNGIAPQSDSLIKLSGIKF 124

Query: 136 AKLTKASSFEYNE 148
            ++   +S EY E
Sbjct: 125 KRINFDNSSEYIE 137


>4QRO-A nrPDB
          Length = 348

 Score = 28.9 bits (63), Expect = 0.99,   Method: Composition-based stats.
 Identities = 19/71 (26%), Positives = 30/71 (42%), Gaps = 9/71 (12%)

Query: 55  AEDNPNDESKIAVLVVIYDHHQRELNQRMIDIQHASGTHVLCTTHIHMDEHNCLETIILQ 114
            E    +E+ +     + D    EL  R++DIQ              MDEH  +ET+IL 
Sbjct: 8   EEHFATEETLMDSAGFVPDKDWPELRSRLLDIQDRRVRL--------MDEHG-IETMILS 58

Query: 115 GNSFEIQRLQL 125
            N+  +Q +  
Sbjct: 59  LNAPAVQAIAD 69


>1MQS-A nrPDB
          Length = 671

 Score = 28.5 bits (62), Expect = 1.1,   Method: Composition-based stats.
 Identities = 13/48 (27%), Positives = 25/48 (52%)

Query: 5   NKDDSIIRFSVSLQQNLLDELDNRIIKNGYSSRSELVRDMIREKLVED 52
              +  I F+ SL +NLL++L  ++   G S + + V D   + +V +
Sbjct: 125 KYSEFYINFTSSLPRNLLEDLAQQVSITGKSDKIKQVYDQYLDFIVTE 172


>6ER9-A nrPDB
          Length = 549

 Score = 27.3 bits (59), Expect = 2.7,   Method: Composition-based stats.
 Identities = 12/61 (19%), Positives = 26/61 (42%)

Query: 85  DIQHASGTHVLCTTHIHMDEHNCLETIILQGNSFEIQRLQLEIGGLRGVKFAKLTKASSF 144
           D++         T+ I++++ N  E    +G  +  + +   +G L  + F  L    +F
Sbjct: 102 DLRRHFRFGTEVTSAIYLEDENLWEVSTDKGEVYRAKYVVNAVGLLSAINFPDLPGLDTF 161

Query: 145 E 145
           E
Sbjct: 162 E 162


>1G5T-A nrPDB
          Length = 196

 Score = 26.6 bits (57), Expect = 3.8,   Method: Composition-based stats.
 Identities = 18/95 (18%), Positives = 32/95 (33%), Gaps = 16/95 (16%)

Query: 54  WAEDNPNDESKIAVLVVIYDHHQRELNQRMIDI------------QHASGTHVLCTTHIH 101
           W   N   E+  A  + ++ H +R L   ++D+             +     V+   +  
Sbjct: 93  WETQN--READTAACMAVWQHGKRMLADPLLDMVVLDELTYMVAYDYLPLEEVISALNAR 150

Query: 102 MDEHNCLETIILQGNSFEIQRLQLEIGGLRGVKFA 136
                    I  +G   +I  L   +  LR VK A
Sbjct: 151 PGHQTV--IITGRGCHRDILDLADTVSELRPVKHA 183


>2BVF-A nrPDB
          Length = 459

 Score = 26.6 bits (57), Expect = 4.4,   Method: Composition-based stats.
 Identities = 10/55 (18%), Positives = 24/55 (43%)

Query: 79  LNQRMIDIQHASGTHVLCTTHIHMDEHNCLETIILQGNSFEIQRLQLEIGGLRGV 133
           L   ++D  +    H+  +  + +DE+      +  G+   +   + +I  LRG+
Sbjct: 226 LLTSLLDALNEMADHIYPSVFVGVDENRAPSVTVCVGHLGGLDIAERDIARLRGL 280


>5W2G-A nrPDB
          Length = 257

 Score = 26.2 bits (56), Expect = 5.0,   Method: Composition-based stats.
 Identities = 22/108 (20%), Positives = 47/108 (43%), Gaps = 9/108 (8%)

Query: 5   NKDDSIIRFSVSLQQNLLDELDNRIIKNGYSSRSELVRDMIR--EKLVEDNWAEDNPNDE 62
           + +     +  SL +  + +  +R   NGY  R + V   I+  EK+++  W E+     
Sbjct: 141 SYETENQHYGRSLTKETIKDGVSRFFHNGYCLRKDAVAASIQKIEKILQ--WFENQKQLN 198

Query: 63  SKIAVLVVIYD-----HHQRELNQRMIDIQHASGTHVLCTTHIHMDEH 105
              + L+ +Y+         E+  RMID  H   ++ +   +++  +H
Sbjct: 199 FYASSLLFVYEGSSQGGSGGEVEVRMIDFAHVFPSNTIDEGYVYGLKH 246


>5XOZ-A nrPDB
          Length = 223

 Score = 26.2 bits (56), Expect = 5.2,   Method: Composition-based stats.
 Identities = 10/26 (38%), Positives = 17/26 (65%)

Query: 1   MDTPNKDDSIIRFSVSLQQNLLDELD 26
           +D  + +D I++  VSL+Q L+ E D
Sbjct: 186 VDASSYEDGIVKSVVSLEQKLISEED 211


>4GAX-A nrPDB
          Length = 563

 Score = 25.8 bits (55), Expect = 8.0,   Method: Composition-based stats.
 Identities = 15/54 (27%), Positives = 26/54 (48%), Gaps = 6/54 (11%)

Query: 23  DELDNRIIKNG----YSSRSELVRDMIREKLVEDNWAEDN--PNDESKIAVLVV 70
            E++  + K G    ++   E V+D +R  +VE  WA +   P  E   +V V+
Sbjct: 362 TEMEEILAKEGKTNIFNCGKEFVKDFVRNLMVEAQWANEGHIPTTEELDSVAVI 415


>4OT9-A nrPDB
          Length = 359

 Score = 25.4 bits (54), Expect = 8.5,   Method: Composition-based stats.
 Identities = 10/64 (15%), Positives = 25/64 (39%), Gaps = 1/64 (1%)

Query: 60  NDESKIAVLVVIYDHHQRELNQRMIDIQHASGTHVLCTTHIHMDEHNCLETIILQGNSFE 119
            DE+    L +   H Q  + ++++ + H +    +     H+     L   ++ G +  
Sbjct: 78  QDENGDTPLHLAIIHGQTSVIEQIVYVIHHAQDLGVVNLTNHL-HQTPLHLAVITGQTSV 136

Query: 120 IQRL 123
           +  L
Sbjct: 137 VSFL 140


>2PG7-A nrPDB
          Length = 476

 Score = 25.4 bits (54), Expect = 9.8,   Method: Composition-based stats.
 Identities = 15/47 (31%), Positives = 20/47 (42%), Gaps = 4/47 (8%)

Query: 20  NLLDELDNRIIKNGYSSRSEL----VRDMIREKLVEDNWAEDNPNDE 62
            LL  L++ I K    ++  L     RD I   L+     E NPN E
Sbjct: 217 QLLQGLEDFIAKKVEHNQRTLDPNSPRDFIDSFLIRMQEEEKNPNTE 263


  Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta
    Posted date:  Jan 3, 2023  9:05 PM
  Number of letters in database: 10,336,785
  Number of sequences in database:  36,641
  
Lambda     K      H
   0.315    0.134    0.336 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,471,578
Number of Sequences: 36641
Number of extensions: 183662
Number of successful extensions: 702
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 672
Number of HSP's gapped (non-prelim): 40
length of query: 148
length of database: 10,336,785
effective HSP length: 88
effective length of query: 60
effective length of database: 7,112,377
effective search space: 426742620
effective search space used: 426742620
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.5 bits)
S2: 54 (25.4 bits)