BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= O14832 (338 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 2A1X-A nrPDB 651 0.0 6EC3-A nrPDB 56 2e-08 3OBZ-A nrPDB 53 2e-07 2RDQ-A nrPDB 42 5e-04 4NMI-A nrPDB 40 0.002 5YBL-A nrPDB 39 0.004 5EJJ-A nrPDB 32 0.41 4Y5S-A nrPDB 31 0.65 4MHU-A nrPDB 29 2.4 5E9U-A nrPDB 28 4.7 6IBG-A nrPDB 28 7.9 >2A1X-A nrPDB Length = 308 Score = 651 bits (1680), Expect = 0.0, Method: Compositional matrix adjust. Identities = 308/308 (100%), Positives = 308/308 (100%) Query: 31 SGTISSASFHPQQFQYTLDNNVLTLEQRKFYEENGFLVIKNLVPDADIQRFRNEFEKICR 90 SGTISSASFHPQQFQYTLDNNVLTLEQRKFYEENGFLVIKNLVPDADIQRFRNEFEKICR Sbjct: 1 SGTISSASFHPQQFQYTLDNNVLTLEQRKFYEENGFLVIKNLVPDADIQRFRNEFEKICR 60 Query: 91 KEVKPLGLTVMRDVTISKSEYAPSEKMITKVQDFQEDKELFRYCTLPEILKYVECFTGPN 150 KEVKPLGLTVMRDVTISKSEYAPSEKMITKVQDFQEDKELFRYCTLPEILKYVECFTGPN Sbjct: 61 KEVKPLGLTVMRDVTISKSEYAPSEKMITKVQDFQEDKELFRYCTLPEILKYVECFTGPN 120 Query: 151 IMAMHTMLINKPPDSGKKTSRHPLHQDLHYFPFRPSDLIVCAWTAMEHISRNNGCLVVLP 210 IMAMHTMLINKPPDSGKKTSRHPLHQDLHYFPFRPSDLIVCAWTAMEHISRNNGCLVVLP Sbjct: 121 IMAMHTMLINKPPDSGKKTSRHPLHQDLHYFPFRPSDLIVCAWTAMEHISRNNGCLVVLP 180 Query: 211 GTHKGSLKPHDYPKWEGGVNKMFHGIQDYEENKARVHLVMEKGDTVFFHPLLIHGSGQNK 270 GTHKGSLKPHDYPKWEGGVNKMFHGIQDYEENKARVHLVMEKGDTVFFHPLLIHGSGQNK Sbjct: 181 GTHKGSLKPHDYPKWEGGVNKMFHGIQDYEENKARVHLVMEKGDTVFFHPLLIHGSGQNK 240 Query: 271 TQGFRKAISCHFASADCHYIDVKGTSQENIEKEVVGIAHKFFGAENSVNLKDIWMFRARL 330 TQGFRKAISCHFASADCHYIDVKGTSQENIEKEVVGIAHKFFGAENSVNLKDIWMFRARL Sbjct: 241 TQGFRKAISCHFASADCHYIDVKGTSQENIEKEVVGIAHKFFGAENSVNLKDIWMFRARL 300 Query: 331 VKGERTNL 338 VKGERTNL Sbjct: 301 VKGERTNL 308 >6EC3-A nrPDB Length = 471 Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 46/164 (28%), Positives = 72/164 (43%), Gaps = 27/164 (16%) Query: 122 QDFQEDKELFRYCTLPEILKYVECFTGPNIMAMHTMLINKPPDSGKKTSRHPLHQD-LHY 180 QD+ E + LFR PE+ + F G ++ L+ K P K+ + P H+D + Sbjct: 324 QDWAERELLFR----PELAELAAAFVGSPVVPTAFALVLKEP---KRAAGVPWHRDRANV 376 Query: 181 FPFRPSDLIVCAWTAMEHISRNNGCLVVLPGTHKGSLKPHDYPKWEGGVNKMFHGIQDYE 240 P +L +C TA NGCL +PG+H L P D + + Sbjct: 377 APHTVCNLSICLDTA----GPENGCLEGVPGSH---LLPDDI------------DVPEIR 417 Query: 241 ENKARVHLVMEKGDTVFFHPLLIHGSGQNKTQGFRKAISCHFAS 284 + RV + + GD + L+HGSG N + +R+ I FA+ Sbjct: 418 DGGPRVPVPSKVGDVIVHDVRLVHGSGPNPSDQWRRTIVIEFAN 461 >3OBZ-A nrPDB Length = 291 Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 36/136 (26%), Positives = 58/136 (42%), Gaps = 4/136 (2%) Query: 152 MAMHTMLINKPPDSGKKTSRHPLHQDLHYFPFRPSDLIVCAWTAMEHISRNNGCLVVLPG 211 + + +M I K P G + S H QD + P ++ W A+E + NGCL +PG Sbjct: 136 VVVQSMYIFKQPHFGGEVSPH---QDASFLYTEPLGRVLGVWIAVEDATLENGCLWFIPG 192 Query: 212 THKGSLKPHDYPKWEGGV-NKMFHGIQDYEENKARVHLVMEKGDTVFFHPLLIHGSGQNK 270 +H + G F G + +N V +++G V H ++H S QN Sbjct: 193 SHTSGVSRRMVRAPVGSAPGTSFLGSEPARDNSLFVPTPVQRGALVLIHGEVVHKSKQNL 252 Query: 271 TQGFRKAISCHFASAD 286 + R+A + H A Sbjct: 253 SDRSRQAYTFHLMEAS 268 >2RDQ-A nrPDB Length = 288 Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 55/228 (24%), Positives = 94/228 (41%), Gaps = 24/228 (10%) Query: 59 KFYEENGFLVIKNLVPDADIQRFRNEFEKICRKEVKPLGLT----VMRDVTISKSEYAPS 114 FYEE+G+L ++N++ D D+ + E R+ + LG + ++TI E Sbjct: 26 SFYEEHGYLFLRNVL-DRDLVKTVAE---QMREGLVALGAADPHATLEELTIDSFESVDE 81 Query: 115 EKMITKVQDFQEDKELFRYCTLPEILKYVE-CFTGPNIMAMHTMLINKPPDSG-KKTSRH 172 M V+ + P +K E F P + + T + P +G ++ S H Sbjct: 82 VAMHDYVK-------YDAFWNNPSTIKVFEQVFGEPVFVFLSTTIRYYPSQAGSEEPSFH 134 Query: 173 ---PLHQDLHYFPFRPSDLIVCAWTAMEHISRNNGCLVVLPGTHKGSLKPHDYPKWEGGV 229 P HQD Y P+ W + +R +G + + G+H+ + H + Sbjct: 135 YLTPFHQDGFYI--GPNQDFRTFWIPLIRTTRESGGVALADGSHRRGKRDHVLNESFRRF 192 Query: 230 NKMFHGIQDYE--ENKARVHLVMEKGDTVFFHPLLIHGSGQNKTQGFR 275 GI E E++ +H ME GD + FH + H S N ++ R Sbjct: 193 GHPVRGIPPTEVSEDEHLLHSPMEPGDILLFHAHMCHKSIPNLSKDPR 240 >4NMI-A nrPDB Length = 310 Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust. Identities = 43/163 (26%), Positives = 66/163 (40%), Gaps = 12/163 (7%) Query: 53 LTLEQRKFYEENGFLVIKNLVPDADIQRFRNEFEKI-CRKEVKPLGLTVMRDVTISKSEY 111 +T EQ YE+NGFL IKN F +E E I +K + L ++ +DV K Sbjct: 35 ITKEQLDSYEKNGFLQIKN---------FFSEDEVIDMQKAIFELQDSI-KDVASDKVIR 84 Query: 112 APSEKMITKVQDFQEDKELFR-YCTLPEILKYVECFTGPNIMAMHTMLINKPPDSGKKTS 170 P I + +D F+ IL V G ++ + + KP GK+ Sbjct: 85 EPESNDIRSIFHVHQDDNYFQDVANDKRILDIVRHLLGSDVYVHQSRINYKPGFKGKEFD 144 Query: 171 RHPLHQDLHYFPFRPSDLIVCAWTAMEHISRNNGCLVVLPGTH 213 H + H P + A+ NG L+++PG+H Sbjct: 145 WHSDFETWHVEDGMPRMRAISVSIALSDNYSFNGPLMLIPGSH 187 >5YBL-A nrPDB Length = 314 Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust. Identities = 53/225 (23%), Positives = 94/225 (41%), Gaps = 42/225 (18%) Query: 61 YEENGFLVIKNLVPDADIQRFRNEFEKICRKEVKPLGLTVMRDVTISKSEYAPSEKMITK 120 ++E+G ++I+ VP + RF E + K + + V D S K++T Sbjct: 41 FKEDGCVIIEGFVPPDQMARFSQEIQPAMEK----IQVQVTNDGN-SNDRVKRFSKLVTT 95 Query: 121 VQDFQEDKELFRYCTLPEILKYVECFTGPNI-MAMH---TMLINKPPDSGKKTSRHPLHQ 176 F+ E+ + E+L+ V F+ P M H TM+I P G R LH+ Sbjct: 96 SPTFRH--EILENDLMHELLQRV--FSKPGEGMGYHFNDTMVIEVQP--GAPAQR--LHR 147 Query: 177 DLHYFPFRPS------DLIVCAWTAMEHISRNNGCLVVLPGTHKGS----LKPHDYPKWE 226 D +P+ S + +V + A+ + NG ++PG+++ + D P++ Sbjct: 148 DQELYPWWNSMGPDAPECLVNFFCAVTPFTVENGATRLVPGSNRWPELTLINATDCPQY- 206 Query: 227 GGVNKMFHGIQDYEENKARVHLVMEKGDTVFFHPLLIHGSGQNKT 271 G ++ V +M+ GD +IHG+G N T Sbjct: 207 GKIDS--------------VPAIMQPGDCYMMSGKVIHGAGHNAT 237 >5EJJ-A nrPDB Length = 564 Score = 32.0 bits (71), Expect = 0.41, Method: Compositional matrix adjust. Identities = 18/74 (24%), Positives = 37/74 (50%) Query: 67 LVIKNLVPDADIQRFRNEFEKICRKEVKPLGLTVMRDVTISKSEYAPSEKMITKVQDFQE 126 LVI+ P+A Q++ ++F K + T M+ +T S +K++ V+ ++ Sbjct: 171 LVIREQKPEAAQQKYLDKFSKGAVPYKDVIEFTAMQSLTRDTSNDTEDQKLVPTVKVTKD 230 Query: 127 DKELFRYCTLPEIL 140 +K R T+ E++ Sbjct: 231 NKHFTRLVTIGEVV 244 >4Y5S-A nrPDB Length = 315 Score = 31.2 bits (69), Expect = 0.65, Method: Compositional matrix adjust. Identities = 52/268 (19%), Positives = 95/268 (35%), Gaps = 47/268 (17%) Query: 59 KFYEENGFLVIKNLVPDADIQRFRNEFEKICRKEVKPLGLTVMRDVTISKSEYAPSEKMI 118 + EE+G ++K L+P ++ F E + + P G ++ D +Y P K + Sbjct: 26 RLLEEDGAFILKGLLPFDVVESFNRELD-VQMAIPPPKGERLLAD------KYPPHFKYV 78 Query: 119 TKVQDFQEDKELFRYCTL--PEILKYVECF---TGPNIMAMHTMLINKPPDSGKKTSRHP 173 V FR L P I E + TG ++ + + +SG P Sbjct: 79 PNVA---TTCPTFRNTVLINPVIHAICEAYFQRTGDYWLSAAFL---REIESGMPA--QP 130 Query: 174 LHQD------LHYFPFRPSDLIVCAWTAMEHISRNNGCLVVLPGTHKGSLKPHDYPKWEG 227 H+D +HY P + + + + NG V+ G+H+ + E Sbjct: 131 FHRDDATHPLMHYQPLEAPPVSLSVIFPLTEFTEENGATEVILGSHRWT---------EV 181 Query: 228 GVNKMFHGIQDYEENKARVHLVMEKGDTVFFHPLLIHGSGQNKTQGF--RKAISCHFASA 285 G E V M+ GD + ++H G N+T R+ + +F S Sbjct: 182 GT----------PERDQAVLATMDPGDVLIVRQRVVHAGGGNRTTAGKPRRVVLAYFNSV 231 Query: 286 DCHYIDVKGTSQENIEKEVVGIAHKFFG 313 + T + + + + + G Sbjct: 232 QLTPFETYRTMPREMVESMTVLGQRMLG 259 >4MHU-A nrPDB Length = 314 Score = 29.3 bits (64), Expect = 2.4, Method: Compositional matrix adjust. Identities = 23/80 (28%), Positives = 35/80 (43%), Gaps = 13/80 (16%) Query: 203 NGCLVVLPGTHKGSL-----KPHDYPKWEGGVNKMFHGIQDYEENKARVHL------VME 251 NG L+V+PG+H+ L P D+ + + K +G+ D E H + Sbjct: 183 NGPLMVIPGSHRTYLTCVGETPDDH--YLSSLKKQEYGVPDEESLAELAHRHGIVAPTGK 240 Query: 252 KGDTVFFHPLLIHGSGQNKT 271 G + F L+HGS N T Sbjct: 241 PGTVILFDCNLMHGSNGNIT 260 >5E9U-A nrPDB Length = 503 Score = 28.5 bits (62), Expect = 4.7, Method: Compositional matrix adjust. Identities = 12/33 (36%), Positives = 19/33 (57%) Query: 50 NNVLTLEQRKFYEENGFLVIKNLVPDADIQRFR 82 N+ TL QR+FY E+G + L+ D + +R Sbjct: 156 NDAATLYQRRFYHEDGSVAYDMLIEDGQEKLYR 188 >6IBG-A nrPDB Length = 446 Score = 27.7 bits (60), Expect = 7.9, Method: Compositional matrix adjust. Identities = 17/62 (27%), Positives = 29/62 (46%), Gaps = 2/62 (3%) Query: 208 VLPGTHKGSLKPHDYPKWEGGVNKMFHGIQDYEENKARVHLVMEKGDTVFFHPLLIHGSG 267 ++PG GS+ P D PK EG + D ++ L+ K + +H +L G+ Sbjct: 11 LVPG--PGSIDPSDVPKLEGASVPVMSTSYDVVVDREFDELLQGKDGLLVYHKMLSDGTV 68 Query: 268 QN 269 +N Sbjct: 69 KN 70 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 2A1X-A nrPDB 514 e-146 2RDQ-A nrPDB 244 4e-65 4NMI-A nrPDB 204 6e-53 3OBZ-A nrPDB 181 4e-46 6EC3-A nrPDB 163 8e-41 Sequences not found previously or not previously below threshold: 4MHU-A nrPDB 119 2e-27 4Y5S-A nrPDB 50 1e-06 5ZM4-A nrPDB 49 3e-06 5YBL-A nrPDB 46 3e-05 2YA2-A nrPDB 36 0.019 4NAO-A nrPDB 35 0.054 2WWN-A nrPDB 32 0.48 2PMZ-C nrPDB 31 0.62 2WAQ-C nrPDB 31 0.87 4AAL-A nrPDB 30 1.7 4J5U-A nrPDB 29 2.5 1WNR-A nrPDB 29 2.9 4U4P-A nrPDB 29 3.0 4OTL-A nrPDB 29 3.0 4M2J-A nrPDB 29 3.3 5ZLI-A nrPDB 28 4.8 4QIW-C nrPDB 28 6.5 >2A1X-A nrPDB Length = 308 Score = 514 bits (1323), Expect = e-146, Method: Composition-based stats. Identities = 308/308 (100%), Positives = 308/308 (100%) Query: 31 SGTISSASFHPQQFQYTLDNNVLTLEQRKFYEENGFLVIKNLVPDADIQRFRNEFEKICR 90 SGTISSASFHPQQFQYTLDNNVLTLEQRKFYEENGFLVIKNLVPDADIQRFRNEFEKICR Sbjct: 1 SGTISSASFHPQQFQYTLDNNVLTLEQRKFYEENGFLVIKNLVPDADIQRFRNEFEKICR 60 Query: 91 KEVKPLGLTVMRDVTISKSEYAPSEKMITKVQDFQEDKELFRYCTLPEILKYVECFTGPN 150 KEVKPLGLTVMRDVTISKSEYAPSEKMITKVQDFQEDKELFRYCTLPEILKYVECFTGPN Sbjct: 61 KEVKPLGLTVMRDVTISKSEYAPSEKMITKVQDFQEDKELFRYCTLPEILKYVECFTGPN 120 Query: 151 IMAMHTMLINKPPDSGKKTSRHPLHQDLHYFPFRPSDLIVCAWTAMEHISRNNGCLVVLP 210 IMAMHTMLINKPPDSGKKTSRHPLHQDLHYFPFRPSDLIVCAWTAMEHISRNNGCLVVLP Sbjct: 121 IMAMHTMLINKPPDSGKKTSRHPLHQDLHYFPFRPSDLIVCAWTAMEHISRNNGCLVVLP 180 Query: 211 GTHKGSLKPHDYPKWEGGVNKMFHGIQDYEENKARVHLVMEKGDTVFFHPLLIHGSGQNK 270 GTHKGSLKPHDYPKWEGGVNKMFHGIQDYEENKARVHLVMEKGDTVFFHPLLIHGSGQNK Sbjct: 181 GTHKGSLKPHDYPKWEGGVNKMFHGIQDYEENKARVHLVMEKGDTVFFHPLLIHGSGQNK 240 Query: 271 TQGFRKAISCHFASADCHYIDVKGTSQENIEKEVVGIAHKFFGAENSVNLKDIWMFRARL 330 TQGFRKAISCHFASADCHYIDVKGTSQENIEKEVVGIAHKFFGAENSVNLKDIWMFRARL Sbjct: 241 TQGFRKAISCHFASADCHYIDVKGTSQENIEKEVVGIAHKFFGAENSVNLKDIWMFRARL 300 Query: 331 VKGERTNL 338 VKGERTNL Sbjct: 301 VKGERTNL 308 >2RDQ-A nrPDB Length = 288 Score = 244 bits (623), Expect = 4e-65, Method: Composition-based stats. Identities = 55/228 (24%), Positives = 94/228 (41%), Gaps = 24/228 (10%) Query: 59 KFYEENGFLVIKNLVPDADIQRFRNEFEKICRKEVKPLGLT----VMRDVTISKSEYAPS 114 FYEE+G+L ++N++ D D+ + E R+ + LG + ++TI E Sbjct: 26 SFYEEHGYLFLRNVL-DRDLVKTVAE---QMREGLVALGAADPHATLEELTIDSFESVDE 81 Query: 115 EKMITKVQDFQEDKELFRYCTLPEILKYVE-CFTGPNIMAMHTMLINKPPDSG-KKTSRH 172 M V+ + P +K E F P + + T + P +G ++ S H Sbjct: 82 VAMHDYVK-------YDAFWNNPSTIKVFEQVFGEPVFVFLSTTIRYYPSQAGSEEPSFH 134 Query: 173 ---PLHQDLHYFPFRPSDLIVCAWTAMEHISRNNGCLVVLPGTHKGSLKPHDYPKWEGGV 229 P HQD Y P+ W + +R +G + + G+H+ + H + Sbjct: 135 YLTPFHQDGFYI--GPNQDFRTFWIPLIRTTRESGGVALADGSHRRGKRDHVLNESFRRF 192 Query: 230 NKMFHGIQDYE--ENKARVHLVMEKGDTVFFHPLLIHGSGQNKTQGFR 275 GI E E++ +H ME GD + FH + H S N ++ R Sbjct: 193 GHPVRGIPPTEVSEDEHLLHSPMEPGDILLFHAHMCHKSIPNLSKDPR 240 >4NMI-A nrPDB Length = 310 Score = 204 bits (518), Expect = 6e-53, Method: Composition-based stats. Identities = 56/241 (23%), Positives = 86/241 (35%), Gaps = 25/241 (10%) Query: 49 DNNV-LTLEQRKFYEENGFLVIKNLVPDADIQRFRNEFEKI-CRKEVKPLGLTVMRDVTI 106 DN +T EQ YE+NGFL IKN F +E E I +K + L ++ +DV Sbjct: 30 DNQAPITKEQLDSYEKNGFLQIKN---------FFSEDEVIDMQKAIFELQDSI-KDVAS 79 Query: 107 SKSEYAPSEKMITKVQDFQEDKELFR-YCTLPEILKYVECFTGPNIMAMHTMLINKPPDS 165 K P I + +D F+ IL V G ++ + + KP Sbjct: 80 DKVIREPESNDIRSIFHVHQDDNYFQDVANDKRILDIVRHLLGSDVYVHQSRINYKPGFK 139 Query: 166 GKKTSRHPLHQDLHYFPFRPSDLIVCAWTAMEHISRNNGCLVVLPGTHKGSLK------P 219 GK+ H + H P + A+ NG L+++PG+H + Sbjct: 140 GKEFDWHSDFETWHVEDGMPRMRAISVSIALSDNYSFNGPLMLIPGSHNYFVSCVGETPD 199 Query: 220 HDYPKWEGGVNKMFHGIQDYEE-----NKARVHLVMEKGDTVFFHPLLIHGSGQNKTQGF 274 ++Y + + E V + G F +HGS N T Sbjct: 200 NNYKESLKKQKLGVPDEESLRELTRIGGGISVPT-GKAGSVTLFESNTMHGSTSNITPYP 258 Query: 275 R 275 R Sbjct: 259 R 259 >3OBZ-A nrPDB Length = 291 Score = 181 bits (459), Expect = 4e-46, Method: Composition-based stats. Identities = 55/268 (20%), Positives = 98/268 (36%), Gaps = 37/268 (13%) Query: 53 LTLEQRKFYEENGFLVIKNLVPDADIQRF-----------------RNEFEKICRKEVKP 95 L+ Q + ++++GFLV++ + + R EF ++++ Sbjct: 4 LSPSQLQKFQQDGFLVLEGFLSAEECVAMQQRIGEIVAEMDVPLHCRTEFSTQEEEQLRA 63 Query: 96 LGLTVMRDVTISKSEY--------------APSEKMITKVQD-FQEDKELFRYCTLP-EI 139 G T + K + P EK I K+ +F+ T ++ Sbjct: 64 QGSTDYFLSSGDKIRFFFEKGVFDEKGNFLVPPEKSINKIGHALHAHDPVFKSITHSFKV 123 Query: 140 LKYVECFTGPNIMAMHTMLINKPPDSGKKTSRHPLHQDLHYFPFRPSDLIVCAWTAMEHI 199 + + +M I K P G + S H QD + P ++ W A+E Sbjct: 124 QTLARSLGLQMPVVVQSMYIFKQPHFGGEVSPH---QDASFLYTEPLGRVLGVWIAVEDA 180 Query: 200 SRNNGCLVVLPGTHKGSLKPHDYPKWEGGV-NKMFHGIQDYEENKARVHLVMEKGDTVFF 258 + NGCL +PG+H + G F G + +N V +++G V Sbjct: 181 TLENGCLWFIPGSHTSGVSRRMVRAPVGSAPGTSFLGSEPARDNSLFVPTPVQRGALVLI 240 Query: 259 HPLLIHGSGQNKTQGFRKAISCHFASAD 286 H ++H S QN + R+A + H A Sbjct: 241 HGEVVHKSKQNLSDRSRQAYTFHLMEAS 268 >6EC3-A nrPDB Length = 471 Score = 163 bits (413), Expect = 8e-41, Method: Composition-based stats. Identities = 46/164 (28%), Positives = 72/164 (43%), Gaps = 27/164 (16%) Query: 122 QDFQEDKELFRYCTLPEILKYVECFTGPNIMAMHTMLINKPPDSGKKTSRHPLHQD-LHY 180 QD+ E + LFR PE+ + F G ++ L+ K P K+ + P H+D + Sbjct: 324 QDWAERELLFR----PELAELAAAFVGSPVVPTAFALVLKEP---KRAAGVPWHRDRANV 376 Query: 181 FPFRPSDLIVCAWTAMEHISRNNGCLVVLPGTHKGSLKPHDYPKWEGGVNKMFHGIQDYE 240 P +L +C TA NGCL +PG+H L P D + + Sbjct: 377 APHTVCNLSICLDTA----GPENGCLEGVPGSH---LLPDDI------------DVPEIR 417 Query: 241 ENKARVHLVMEKGDTVFFHPLLIHGSGQNKTQGFRKAISCHFAS 284 + RV + + GD + L+HGSG N + +R+ I FA+ Sbjct: 418 DGGPRVPVPSKVGDVIVHDVRLVHGSGPNPSDQWRRTIVIEFAN 461 >4MHU-A nrPDB Length = 314 Score = 119 bits (298), Expect = 2e-27, Method: Composition-based stats. Identities = 41/235 (17%), Positives = 80/235 (34%), Gaps = 23/235 (9%) Query: 53 LTLEQRKFYEENGFLVIKNLVPDADIQRFRNEFEKICRKEVKPLGLTVMRDVTISKSEYA 112 ++ Q ++ +G++V++++ F + +K L L + Sbjct: 41 ISARQAAAFDRDGYIVLEDI--------FSADEVAFLQKAAGNL-LADPAALDADTIVTE 91 Query: 113 PSEKMITKVQDFQ-EDKELFRYCTLPEILKYVECFTGPNIMAMHTMLINKPPDSGKKTSR 171 P I + + + + R + G + + L KP G++ Sbjct: 92 PQSNEIRSIFEIHAQSPVMARLAADARLADVARFLLGDEVYIHQSRLNYKPGFKGREFYW 151 Query: 172 HPLHQDLHYFPFRPSDLIVCAWTAMEHISRNNGCLVVLPGTHKG-----SLKPHDYPKWE 226 H + H P + + + +NG L+V+PG+H+ P D + Sbjct: 152 HSDFETWHVEDGMPRMRALSMSVLLAENTPHNGPLMVIPGSHRTYLTCVGETPDD--HYL 209 Query: 227 GGVNKMFHGIQDYEENKARVH-----LVM-EKGDTVFFHPLLIHGSGQNKTQGFR 275 + K +G+ D E H + G + F L+HGS N T R Sbjct: 210 SSLKKQEYGVPDEESLAELAHRHGIVAPTGKPGTVILFDCNLMHGSNGNITPFPR 264 >4Y5S-A nrPDB Length = 315 Score = 50.2 bits (118), Expect = 1e-06, Method: Composition-based stats. Identities = 41/231 (17%), Positives = 73/231 (31%), Gaps = 37/231 (16%) Query: 62 EENGFLVIKNLVPDADIQRFRNEFEKICRKEVKPLGLTVMRDVTISKSEYAPSEKMITKV 121 EE+G ++K L+P ++ F E + P G ++ D +Y P+ Sbjct: 29 EEDGAFILKGLLPFDVVESFNRELDVQMAIP-PPKGERLLADKYPPHFKYVPNVATTCPT 87 Query: 122 QDFQEDKELFRYCTLPEILKYVECFTGPNIMAMHTMLINKPPDSGKKTSRHPLHQD---- 177 P I E + + + +SG P H+D Sbjct: 88 FR-------NTVLINPVIHAICEAYFQRTGDYWLSAAFLREIESGMPA--QPFHRDDATH 138 Query: 178 --LHYFPFRPSDLIVCAWTAMEHISRNNGCLVVLPGTHKGSLKPHDYPKWEGGVNKMFHG 235 +HY P + + + + NG V+ G+H+ V Sbjct: 139 PLMHYQPLEAPPVSLSVIFPLTEFTEENGATEVILGSHR-----------WTEVGTPERD 187 Query: 236 IQDYEENKARVHLVMEKGDTVFFHPLLIHGSGQNKTQ--GFRKAISCHFAS 284 V M+ GD + ++H G N+T R+ + +F S Sbjct: 188 --------QAVLATMDPGDVLIVRQRVVHAGGGNRTTAGKPRRVVLAYFNS 230 >5ZM4-A nrPDB Length = 306 Score = 49.0 bits (115), Expect = 3e-06, Method: Composition-based stats. Identities = 39/227 (17%), Positives = 77/227 (33%), Gaps = 43/227 (18%) Query: 62 EENGFLVIKNLVPDADIQRFRNEFEKICRKEVKPLGLTVMRDVTISKSEYAPSEKMITKV 121 +E+G ++++ ++ I + ++ ++ K + K E M + Sbjct: 41 QEDGCVIVEQVICPNIIAKISDDVNRVMDKAT----------IGAKKGEQTHIINMHNRT 90 Query: 122 QDFQE--------DKELFRYCTLPEIL-KYVECFTGPNIMAMHTMLINKPPDSGKKTSR- 171 + EL E+L K + +G + M +L P ++ R Sbjct: 91 IHMGDLVLTSKTYRDELLNLPFAHEVLEKVFKKDSGDYWLNMGNILNMLPGAEAQRPHRD 150 Query: 172 ---HPLHQDLHYFPFRPSDLIVCAWTAMEHISRNNGCLVVLPGTHKGSLKPHDYPKWEGG 228 +P+ Q H P DL++ + +NG ++LP +H G Sbjct: 151 DYLYPVSQ--HMDPATSPDLMINITFPLNEFRHDNGGTLLLPKSHTG---------PNAD 199 Query: 229 VNKMFHGIQDYEENKARVHLVMEKGDTVFFHPLLIHGSGQNKTQGFR 275 + E M+ GD + F +HG G N++ R Sbjct: 200 FYANAEDLPAAE---------MQVGDALIFTGKCVHGGGANRSDKPR 237 >5YBL-A nrPDB Length = 314 Score = 45.6 bits (106), Expect = 3e-05, Method: Composition-based stats. Identities = 49/259 (18%), Positives = 90/259 (34%), Gaps = 34/259 (13%) Query: 32 GTISSASFHPQQFQYTLDNNVLTLEQRKFYEENGFLVIKNLVPDADIQRFRNEFEKICRK 91 G + S P + Q E ++E+G ++I+ VP + RF E + K Sbjct: 13 GLVPRGSHMPSRLQ-KFPATAPADEIYAAFKEDGCVIIEGFVPPDQMARFSQEIQPAMEK 71 Query: 92 EVKPL---GLTVMRDVTISKSEYAPSEKMITKVQDFQEDKELFRYCTLPEILKYVECFTG 148 + G + R SK +++ + L R + P G Sbjct: 72 IQVQVTNDGNSNDRVKRFSKLVTTSPTFRHEILENDLMHELLQRVFSKPG--------EG 123 Query: 149 PNIMAMHTMLINKPPDSGKKTSRHPLHQD------LHYFPFRPSDLIVCAWTAMEHISRN 202 TM+I P + + LH+D + + +V + A+ + Sbjct: 124 MGYHFNDTMVIEVQPGAPAQ----RLHRDQELYPWWNSMGPDAPECLVNFFCAVTPFTVE 179 Query: 203 NGCLVVLPGTHKGSLKPHDYPKWEGGVNKMFHGIQDYEENKARVHLVMEKGDTVFFHPLL 262 NG ++PG+++ W Y + + V +M+ GD + Sbjct: 180 NGATRLVPGSNR----------WPELTLINATDCPQYGKIDS-VPAIMQPGDCYMMSGKV 228 Query: 263 IHGSGQNKT-QGFRKAISC 280 IHG+G N T R+A++ Sbjct: 229 IHGAGHNATLSDQRRALAF 247 >2YA2-A nrPDB Length = 708 Score = 36.3 bits (82), Expect = 0.019, Method: Composition-based stats. Identities = 20/107 (18%), Positives = 39/107 (36%), Gaps = 2/107 (1%) Query: 34 ISSASFHPQQFQYTLDNNVLTLEQRKFYEENGFLVIKNLVPDADIQRFRNEFEKICRK-- 91 + A PQ Y +N T E YE + + D+ + FE K Sbjct: 129 VDPAKLGPQDLTYGKIHNFKTREDAVIYEAHVRDFTSDPAIAKDLTKPFGTFEAFIEKLD 188 Query: 92 EVKPLGLTVMRDVTISKSEYAPSEKMITKVQDFQEDKELFRYCTLPE 138 +K LG+T ++ + + + K ++ D+ + + P+ Sbjct: 189 YLKDLGVTHIQLLPVLSYYFVNELKNHERLSDYASSNSNYNWGYDPQ 235 >4NAO-A nrPDB Length = 326 Score = 34.8 bits (78), Expect = 0.054, Method: Composition-based stats. Identities = 19/130 (14%), Positives = 39/130 (30%), Gaps = 27/130 (20%) Query: 168 KTSRHPLHQDLHYFPFRPS--DLIVCAWTAMEHISRNNGCLVVLPGTHKGSLKPHDYPKW 225 + H P + ++ +TA+ G + G++K Sbjct: 149 EQKWHRDQPRYPLVKEGPDAPEGMLNFFTALTDFDAETGKTQYILGSNKR---------- 198 Query: 226 EGGVNKMFHGIQDYEENKARVHLVMEKGDTVFFHPLLIHGSGQNKTQGFRKAISCHFA-- 283 + G D + ++ ++ GDT + H N++ R+A+ Sbjct: 199 ------VELGEPDA--DHPIEYVGLKPGDTTIVSGKITHRGSDNRSDKMRRAMPIMIIPS 250 Query: 284 -----SADCH 288 A CH Sbjct: 251 ILTPFDATCH 260 >2WWN-A nrPDB Length = 169 Score = 31.7 bits (70), Expect = 0.48, Method: Composition-based stats. Identities = 25/135 (18%), Positives = 38/135 (28%), Gaps = 16/135 (11%) Query: 144 ECFTGPNIMAMHTMLINKPPDSGKKTSRHPLH--QDLHYFPFRPSDLIVCAWTAMEHISR 201 + + L+ P +G H H + P V A A H+ Sbjct: 31 KALGTVTVTETAYGLLFTPHLTGLAPGIHGFHLHEKPSCAPGMKDGKAVPALAAGGHLDP 90 Query: 202 NNGCLVVLPGTHKG--SLKPHDYPKWEGGVNKMFHGIQDYEENKARVHLVMEKGDTVFFH 259 N + + P KG P +G R+ + E V H Sbjct: 91 NKTGVHLGPYNDKGHLGDLPGLVVNADGTATYPVL--------APRLKSLSE----VKQH 138 Query: 260 PLLIHGSGQNKTQGF 274 L+IH G N + Sbjct: 139 ALMIHAGGDNYSDHP 153 >2PMZ-C nrPDB Length = 392 Score = 31.3 bits (69), Expect = 0.62, Method: Composition-based stats. Identities = 18/82 (21%), Positives = 37/82 (45%), Gaps = 5/82 (6%) Query: 69 IKNLVPDADIQRFRNEFEKICRKEVKPLGLTVMRD-----VTISKSEYAPSEKMITKVQD 123 +KNL+ + +I R+E +KI +K ++ + ++S P +M + Sbjct: 29 LKNLILNKEIIVTRDEIDKIFDLAIKEYSEGLIAPGEAIGIVAAQSVGEPGTQMTLRTFH 88 Query: 124 FQEDKELFRYCTLPEILKYVEC 145 F +EL LP +++ V+ Sbjct: 89 FAGIRELNVTLGLPRLIEIVDA 110 >2WAQ-C nrPDB Length = 395 Score = 30.9 bits (68), Expect = 0.87, Method: Composition-based stats. Identities = 17/82 (20%), Positives = 37/82 (45%), Gaps = 5/82 (6%) Query: 69 IKNLVPDADIQRFRNEFEKICRKEVKPLGLTVMRD-----VTISKSEYAPSEKMITKVQD 123 +KNL+ + ++ R+E +KI +K ++ + ++S P +M + Sbjct: 32 LKNLISNKEVLVTRDEIDKIFDLAIKEYSEGLIAPGEAIGIVAAQSVGEPGTQMTLRTFH 91 Query: 124 FQEDKELFRYCTLPEILKYVEC 145 F +EL LP +++ V+ Sbjct: 92 FAGIRELNVTLGLPRLIEIVDA 113 >4AAL-A nrPDB Length = 341 Score = 29.8 bits (65), Expect = 1.7, Method: Composition-based stats. Identities = 11/52 (21%), Positives = 16/52 (30%) Query: 211 GTHKGSLKPHDYPKWEGGVNKMFHGIQDYEENKARVHLVMEKGDTVFFHPLL 262 G D K G+ K ++ +E G +FF P L Sbjct: 9 GAETAVPNSEDVMKRAQGLFKPIPAKPPVMKDNPASPSRVELGRMLFFDPRL 60 >4J5U-A nrPDB Length = 420 Score = 29.4 bits (64), Expect = 2.5, Method: Composition-based stats. Identities = 16/71 (22%), Positives = 30/71 (42%), Gaps = 9/71 (12%) Query: 229 VNKMFHGIQD---YEENKARVHLVMEKGDTVF-----FHPLLIHGSGQNKTQGFRKAISC 280 N + +Q + N+A +++ GDTV L HG+ N + + A+S Sbjct: 86 FNCKYANVQPHSGSQANQAVYLALLQPGDTVLGMSLDSGGHLTHGAAPNMSGKWFNAVSY 145 Query: 281 HFASADCHYID 291 + + + ID Sbjct: 146 S-VNKETYLID 155 >1WNR-A nrPDB Length = 94 Score = 29.0 bits (63), Expect = 2.9, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 20/49 (40%) Query: 210 PGTHKGSLKPHDYPKWEGGVNKMFHGIQDYEENKARVHLVMEKGDTVFF 258 P T G + P + + G EN RV L +++GD V F Sbjct: 18 PKTKGGIVLPDTAKEKPQKGKVIAVGTGRVLENGQRVPLEVKEGDIVVF 66 >4U4P-A nrPDB Length = 233 Score = 29.0 bits (63), Expect = 3.0, Method: Composition-based stats. Identities = 21/116 (18%), Positives = 36/116 (31%), Gaps = 8/116 (6%) Query: 134 CTLPEILKYVECFTGPNIMAMHTMLINKPPDSGKKTSRHPLHQDLHYFPFRPSDLIVCAW 193 C PE L+ + GP+ + + L+ P+ K + V Sbjct: 111 CIAPETLRVAQNLVGPDNVHVALSLVEYKPELQKAMEFV--FGTTFVCDNMDNAKKVAFD 168 Query: 194 TAMEHISRNNGCLVVLP-GTHKGSLKPHDYPKWEGGVNKMFHGIQD---YEENKAR 245 + + G V P GT G + + +QD +EN+ R Sbjct: 169 KRIMTRTVTLGGDVFDPHGTLSGGARSQ--AASILTKFQELKDVQDELRIKENELR 222 >4OTL-A nrPDB Length = 423 Score = 29.0 bits (63), Expect = 3.0, Method: Composition-based stats. Identities = 16/68 (23%), Positives = 27/68 (39%), Gaps = 6/68 (8%) Query: 250 MEKGDTVF-----FHPLLIHGSGQNKTQGFRKAISCHF-ASADCHYIDVKGTSQENIEKE 303 ++ GDT+ L HGS N + + +S + D Y + + E+ K Sbjct: 119 LKPGDTIMGMSLAHGGHLTHGSPVNMSGKWFNVVSYGLNENEDIDYDAAEKLANEHKPKL 178 Query: 304 VVGIAHKF 311 +V A F Sbjct: 179 IVAGASAF 186 >4M2J-A nrPDB Length = 406 Score = 29.0 bits (63), Expect = 3.3, Method: Composition-based stats. Identities = 23/114 (20%), Positives = 42/114 (36%), Gaps = 13/114 (11%) Query: 208 VLP-GTHKGSLKPH-----DYPKWEGGVNKMFHGIQDYEENKARVHLVMEKGDTVFF--- 258 ++P G+H SL+P +W + I D + + E D Sbjct: 14 LVPRGSHMSSLRPRREDPPVLEEWYRR--HLGPDIHDISSSGVHPYSFAEIRDVCRIPAA 71 Query: 259 --HPLLIHGSGQNKTQGFRKAISCHFASADCHYIDVKGTSQENIEKEVVGIAHK 310 +++ S +G R+AI+ +A D + V S E I + + H+ Sbjct: 72 DLDAVVMDDSVSQGGEGVRRAIADRYAGGDADRVLVTHGSSEAIALTLNALLHR 125 >5ZLI-A nrPDB Length = 481 Score = 28.2 bits (61), Expect = 4.8, Method: Composition-based stats. Identities = 9/81 (11%), Positives = 24/81 (29%) Query: 115 EKMITKVQDFQEDKELFRYCTLPEILKYVECFTGPNIMAMHTMLINKPPDSGKKTSRHPL 174 M T V ++ ++ LF T + ++ F G + + + P Sbjct: 276 SGMHTHVSVWKNNENLFSGETYKGLSEFALHFLGGVLRHARGLAAFTNASTNSYKRLIPG 335 Query: 175 HQDLHYFPFRPSDLIVCAWTA 195 ++ + ++ Sbjct: 336 YEAPSILTYSANNRSASVRIP 356 >4QIW-C nrPDB Length = 391 Score = 27.8 bits (60), Expect = 6.5, Method: Composition-based stats. Identities = 17/80 (21%), Positives = 31/80 (38%), Gaps = 2/80 (2%) Query: 70 KNLVPDADIQRFRNEFEKICRKEVKPLGLTVMRDVTISKSEYAPSEKMITKVQDFQEDKE 129 K + +IQ +E + +K + G V ++S PS +M + E Sbjct: 34 KYKLKKDEIQAIIDETVREYQKALIEPGEAV--GTVAAQSIGEPSTQMTLNTFHYAGVAE 91 Query: 130 LFRYCTLPEILKYVECFTGP 149 + LP I++ V+ P Sbjct: 92 INVTLGLPRIIEIVDARKNP 111 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.312 0.123 0.316 Lambda K H 0.267 0.0380 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 11,833,685 Number of Sequences: 36641 Number of extensions: 454361 Number of successful extensions: 1131 Number of sequences better than 10.0: 23 Number of HSP's better than 10.0 without gapping: 18 Number of HSP's successfully gapped in prelim test: 17 Number of HSP's that attempted gapping in prelim test: 1091 Number of HSP's gapped (non-prelim): 36 length of query: 338 length of database: 10,336,785 effective HSP length: 98 effective length of query: 240 effective length of database: 6,745,967 effective search space: 1619032080 effective search space used: 1619032080 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.5 bits) S2: 59 (27.4 bits)