BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= O14792 (307 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 1ZRH-A nrPDB 570 e-163 3UAN-A nrPDB 514 e-146 3BD9-A nrPDB 310 7e-85 1T8T-A nrPDB 228 2e-60 1NST-A nrPDB 111 5e-25 3RNL-A nrPDB 56 2e-08 5IQY-A nrPDB 35 0.028 5TU0-A nrPDB 30 0.90 1NHQ-A nrPDB 30 1.4 4KWM-A nrPDB 29 2.0 5D9W-A nrPDB 28 4.0 5WRJ-A nrPDB 28 4.6 3AP1-A nrPDB 27 7.6 >1ZRH-A nrPDB Length = 274 Score = 570 bits (1470), Expect = e-163, Method: Compositional matrix adjust. Identities = 272/274 (99%), Positives = 272/274 (99%) Query: 34 AGTLQDDVRDGVAPNGSAQQLPQTIIIGVRKGGTRALLEMLSLHPDVAAAENEVHFFDWE 93 TLQDDVRDGVAPNGSAQQLPQTIIIGVRKGGTRALLEMLSLHPDVAAAENEVHFFDWE Sbjct: 1 GSTLQDDVRDGVAPNGSAQQLPQTIIIGVRKGGTRALLEMLSLHPDVAAAENEVHFFDWE 60 Query: 94 EHYSHGLGWYLSQMPFSWPHQLTVEKTPAYFTSPKVPERVYSMNPSIRLLLILRDPSERV 153 EHYSHGLGWYLSQMPFSWPHQLTVEKTPAYFTSPKVPERVYSMNPSIRLLLILRDPSERV Sbjct: 61 EHYSHGLGWYLSQMPFSWPHQLTVEKTPAYFTSPKVPERVYSMNPSIRLLLILRDPSERV 120 Query: 154 LSDYTQVFYNHMQKHKPYPSIEEFLVRDGRLNVDYKALNRSLYHVHMQNWLRFFPLRHIH 213 LSDYTQVFYNHMQKHKPYPSIEEFLVRDGRLNVDYKALNRSLYHVHMQNWLRFFPLRHIH Sbjct: 121 LSDYTQVFYNHMQKHKPYPSIEEFLVRDGRLNVDYKALNRSLYHVHMQNWLRFFPLRHIH 180 Query: 214 IVDGDRLIRDPFPEIQKVERFLKLSPQINASNFYFNKTKGFYCLRDSGRDRCLHESKGRA 273 IVDGDRLIRDPFPEIQKVERFLKLSPQINASNFYFNKTKGFYCLRDSGRDRCLHESKGRA Sbjct: 181 IVDGDRLIRDPFPEIQKVERFLKLSPQINASNFYFNKTKGFYCLRDSGRDRCLHESKGRA 240 Query: 274 HPQVDPKLLNKLHEYFHEPNKKFFELVGRTFDWH 307 HPQVDPKLLNKLHEYFHEPNKKFFELVGRTFDWH Sbjct: 241 HPQVDPKLLNKLHEYFHEPNKKFFELVGRTFDWH 274 >3UAN-A nrPDB Length = 269 Score = 514 bits (1324), Expect = e-146, Method: Compositional matrix adjust. Identities = 242/264 (91%), Positives = 253/264 (95%) Query: 44 GVAPNGSAQQLPQTIIIGVRKGGTRALLEMLSLHPDVAAAENEVHFFDWEEHYSHGLGWY 103 G A NGS QQLPQTIIIGVRKGGTRALLEMLSLHPDVAAAENEVHFFDWEEHYS GLGWY Sbjct: 6 GTASNGSTQQLPQTIIIGVRKGGTRALLEMLSLHPDVAAAENEVHFFDWEEHYSQGLGWY 65 Query: 104 LSQMPFSWPHQLTVEKTPAYFTSPKVPERVYSMNPSIRLLLILRDPSERVLSDYTQVFYN 163 L+QMPFS PHQLTVEKTPAYFTSPKVPER++SMNP+IRLLLILRDPSERVLSDYTQV YN Sbjct: 66 LTQMPFSSPHQLTVEKTPAYFTSPKVPERIHSMNPTIRLLLILRDPSERVLSDYTQVLYN 125 Query: 164 HMQKHKPYPSIEEFLVRDGRLNVDYKALNRSLYHVHMQNWLRFFPLRHIHIVDGDRLIRD 223 H+QKHKPYP IE+ L+RDGRLN+DYKALNRSLYH HM NWLRFFPL HIHIVDGDRLIRD Sbjct: 126 HLQKHKPYPPIEDLLMRDGRLNLDYKALNRSLYHAHMLNWLRFFPLGHIHIVDGDRLIRD 185 Query: 224 PFPEIQKVERFLKLSPQINASNFYFNKTKGFYCLRDSGRDRCLHESKGRAHPQVDPKLLN 283 PFPEIQKVERFLKLSPQINASNFYFNKTKGFYCLRDSG+DRCLHESKGRAHPQVDPKLL+ Sbjct: 186 PFPEIQKVERFLKLSPQINASNFYFNKTKGFYCLRDSGKDRCLHESKGRAHPQVDPKLLD 245 Query: 284 KLHEYFHEPNKKFFELVGRTFDWH 307 KLHEYFHEPNKKFF+LVGRTFDWH Sbjct: 246 KLHEYFHEPNKKFFKLVGRTFDWH 269 >3BD9-A nrPDB Length = 280 Score = 310 bits (793), Expect = 7e-85, Method: Compositional matrix adjust. Identities = 141/267 (52%), Positives = 194/267 (72%), Gaps = 4/267 (1%) Query: 44 GVAPNGS-AQQLPQTIIIGVRKGGTRALLEMLSLHPDVAAAENEVHFFDWEEHYSHGLGW 102 G+ P GS QQLP+ IIIGVRKGGTRALLEML+LHP V A E+HFFD +E+Y G+ W Sbjct: 13 GLVPRGSHMQQLPKAIIIGVRKGGTRALLEMLNLHPAVVKASQEIHFFDNDENYGKGIEW 72 Query: 103 YLSQMPFSWPHQLTVEKTPAYFTSPKVPERVYSMNPSIRLLLILRDPSERVLSDYTQVFY 162 Y +MPFS+P Q+T+EK+PAYF + +VPER+Y MN SI+LL+I+R+P+ R +SDYTQV Sbjct: 73 YRKKMPFSYPQQITIEKSPAYFITEEVPERIYKMNSSIKLLIIVREPTTRAISDYTQVLE 132 Query: 163 NHMQKHKPYPSIEEFLV--RDGRLNVDYKALNRSLYHVHMQNWLRFFPLRHIHIVDGDRL 220 +K+K Y E+ + +N YKA+ S+Y H++ WL++FP+ H+VDGDRL Sbjct: 133 GKERKNKTYYKFEKLAIDPNTCEVNTKYKAVRTSIYTKHLERWLKYFPIEQFHVVDGDRL 192 Query: 221 IRDPFPEIQKVERFLKLSPQINASNFYFNKTKGFYCLR-DSGRDRCLHESKGRAHPQVDP 279 I +P PE+Q VE+FL L P+I+ N YFN T+GFYCLR + ++CL SKGR HP+VDP Sbjct: 193 ITEPLPELQLVEKFLNLPPRISQYNLYFNATRGFYCLRFNEIFNKCLAGSKGRIHPEVDP 252 Query: 280 KLLNKLHEYFHEPNKKFFELVGRTFDW 306 ++ KL ++FH N+KF+++ GRT +W Sbjct: 253 SVITKLRKFFHPFNQKFYQITGRTLNW 279 >1T8T-A nrPDB Length = 271 Score = 228 bits (581), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 112/263 (42%), Positives = 164/263 (62%), Gaps = 12/263 (4%) Query: 50 SAQQLPQTIIIGVRKGGTRALLEMLSLHPDVAAAENEVHFFDWEEHYSHGLGWYLSQMPF 109 ++QLPQ IIIGV+KGGTRALLE L +HPDV A E HFFD Y GL WY MP Sbjct: 13 GSKQLPQAIIIGVKKGGTRALLEFLRVHPDVRAVGAEPHFFD--RSYDKGLAWYRDLMPR 70 Query: 110 SWPHQLTVEKTPAYFTSPKVPERVYSMNPSIRLLLILRDPSERVLSDYTQVFYNHMQKHK 169 + Q+T+EKTP+YF + + P R+ +M+ +L++++RDP R +SDYTQ + K Sbjct: 71 TLDGQITMEKTPSYFVTREAPARISAMSKDTKLIVVVRDPVTRAISDYTQT----LSKRP 126 Query: 170 PYPSIEEFLVRD---GRLNVDYKALNRSLYHVHMQNWLRFFPLRHIHIVDGDRLIRDPFP 226 P+ E ++ G ++ + A+ +Y H+++WLR FP+R + V G+RLI DP Sbjct: 127 DIPTFESLTFKNRTAGLIDTSWSAIQIGIYAKHLEHWLRHFPIRQMLFVSGERLISDPAG 186 Query: 227 EIQKVERFLKLSPQINASNFYFNKTKGFYCLRD---SGRDRCLHESKGRAHPQVDPKLLN 283 E+ +V+ FL L I +FYFNKTKGF CL+ S R CL ++KGR HP++D +++ Sbjct: 187 ELGRVQDFLGLKRIITDKHFYFNKTKGFPCLKKAEGSSRPHCLGKTKGRTHPEIDREVVR 246 Query: 284 KLHEYFHEPNKKFFELVGRTFDW 306 +L E++ N KF+++ G F W Sbjct: 247 RLREFYRPFNLKFYQMTGHDFGW 269 >1NST-A nrPDB Length = 325 Score = 111 bits (277), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 79/280 (28%), Positives = 138/280 (49%), Gaps = 29/280 (10%) Query: 42 RDGVAPNGSAQQLPQTIIIGVRKGGTRALLEMLSLHPDVAA------AENEVHFFDWEEH 95 +D + + + P+ +IIG +K GT AL L +HPD+++ E+ FF+ + Sbjct: 35 KDIWSKEKTCDRFPKLLIIGPQKTGTTALYLFLGMHPDLSSNYPSSETFEEIQFFN-GHN 93 Query: 96 YSHGLGWYLSQMPFSWPHQLT----VEKTPAYFTSPKVPERVYSMNPSIRLLLILRDPSE 151 Y G+ WY+ P P T EK+ YF S P R ++ P ++L IL +P++ Sbjct: 94 YHKGIDWYMEFFPI--PSNTTSDFYFEKSANYFDSEVAPRRAAALLPKAKVLTILINPAD 151 Query: 152 RVLSDYTQVFYNHMQKHKPYPSIE----EFLVRDGRLNVDYKAL-NRSL----YHVHMQN 202 R S +Y H + H +++ E + + +AL NR L Y H++ Sbjct: 152 RAYS-----WYQHQRAHDDPVALKYTFHEVITAGSDASSKLRALQNRCLVPGWYATHIER 206 Query: 203 WLRFFPLRHIHIVDGDRLIRDPFPEIQKVERFLKLSPQINA-SNFYFNKTKGFYC-LRDS 260 WL + I ++DG L +P + V++FL ++ I+ F+ KGF+C L + Sbjct: 207 WLSAYHANQILVLDGKLLRTEPAKVMDMVQKFLGVTNTIDYHKTLAFDPKKGFWCQLLEG 266 Query: 261 GRDRCLHESKGRAHPQVDPKLLNKLHEYFHEPNKKFFELV 300 G+ +CL +SKGR +P++D L +Y+ + N + +L+ Sbjct: 267 GKTKCLGKSKGRKYPEMDLDSRAFLKDYYRDHNIELSKLL 306 >3RNL-A nrPDB Length = 311 Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 50/212 (23%), Positives = 89/212 (41%), Gaps = 25/212 (11%) Query: 48 NGSAQQLPQTIIIGVRKGGTRALLEMLSLHPDV-AAAENEVHFF---DWEEHYS----HG 99 N P I+G K GT +L LS HPD+ + E HFF D+ E ++ G Sbjct: 2 NAMGVARPNFFIVGAAKCGTSSLDRYLSQHPDIYIPPKKEAHFFSIPDFPERFTGPGDEG 61 Query: 100 LGWYLSQMPFSW--------PHQLTVEKTPAYFTSPKVPERVYSMNPSIRLLLILRDPSE 151 + Y + ++ + E + Y P +R+Y P ++L++LR+P + Sbjct: 62 MNLYTIRDEDAYMRLFDGVRGERAVGEASVFYLFYPGTAQRMYDAYPDAKILIMLRNPVD 121 Query: 152 RVLSDYTQVFYNHMQKHKPYPSIEEFLVR-DGRLNVDYKAL----NRSLYHVHMQNWLRF 206 R S Y + ++ + S E L + + R+ Y+ L LY ++ +L Sbjct: 122 RAFSAYMHL----VRDERETLSFRESLAKEEERIRQHYEPLWYYRAVGLYAAQVKRYLDV 177 Query: 207 FPLRHIHIVDGDRLIRDPFPEIQKVERFLKLS 238 F + ++ + RDP ++ FL +S Sbjct: 178 FGREQVKVILFEEFARDPVQVVRDCCAFLGVS 209 >5IQY-A nrPDB Length = 216 Score = 35.4 bits (80), Expect = 0.028, Method: Compositional matrix adjust. Identities = 32/129 (24%), Positives = 53/129 (41%), Gaps = 7/129 (5%) Query: 120 TPAYFTSPKVPERVYSMNPSIRLLLILRDPS---ERVLSDYTQVFYNHMQKHKPYPSIEE 176 TP+ T P+ + PS L +D S E+ L D Q H++ H PY S E Sbjct: 90 TPSLVTPPEYASVGSKIFPSFVKFLKSKDASDGSEKALLDELQALDEHLKAHGPYISGEN 149 Query: 177 FLVRDGRLNVDYKALNRSLYHVHMQNWLRFFPLRHIHIVDGDRLIRDPFPEIQKVERFL- 235 D L++ K + + H + W L +H R+ F + + ++L Sbjct: 150 VSAAD--LSLGPKLFHLQVALEHFKGWKIPENLTSVHAYTKALFSRESFVKTKPANQYLI 207 Query: 236 -KLSPQINA 243 +P++NA Sbjct: 208 AGWAPKVNA 216 >5TU0-A nrPDB Length = 390 Score = 30.4 bits (67), Expect = 0.90, Method: Compositional matrix adjust. Identities = 24/100 (24%), Positives = 42/100 (42%), Gaps = 4/100 (4%) Query: 96 YSHGLGWYLSQMPFSWPHQLTVEKTPAYFTSPKVPERVYSMNPSIRLLLILRDPSERVLS 155 ++ G GW +S ++ +K Y T+ K E +Y M + L RD ++ Sbjct: 270 FAGGKGWVVSNYS---KNKDVAQKWLDYVTNQKNQETLYDMTNEVPANLKARDTAKSKND 326 Query: 156 DYTQVFYNHMQKHKPYPSIEEFL-VRDGRLNVDYKALNRS 194 + T + +P P+I E V G N+ + A + S Sbjct: 327 ELTNAVIEQYKNAQPMPNIPEMSEVWTGAENLKFDAASGS 366 >1NHQ-A nrPDB Length = 447 Score = 30.0 bits (66), Expect = 1.4, Method: Compositional matrix adjust. Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 8/52 (15%) Query: 56 QTIIIGVRKGGTRALLEMLSLHPDVAAAENEVHFF---DWEEHYSHGLGWYL 104 + I++G GG A+ E+L+LHPD E+ ++ D+ S G+ YL Sbjct: 2 KVIVLGSSHGGYEAVEELLNLHPDA-----EIQWYEKGDFISFLSSGMQLYL 48 >4KWM-A nrPDB Length = 329 Score = 29.3 bits (64), Expect = 2.0, Method: Compositional matrix adjust. Identities = 16/51 (31%), Positives = 24/51 (47%) Query: 79 DVAAAENEVHFFDWEEHYSHGLGWYLSQMPFSWPHQLTVEKTPAYFTSPKV 129 D A ++EV + + +G S MPF H LT+ + P Y S K+ Sbjct: 265 DSAIVKSEVEYGNCNTKCQTPIGAINSSMPFHNIHPLTIGECPKYVKSNKL 315 >5D9W-A nrPDB Length = 230 Score = 28.5 bits (62), Expect = 4.0, Method: Compositional matrix adjust. Identities = 28/134 (20%), Positives = 51/134 (38%), Gaps = 17/134 (12%) Query: 120 TPAYFTSPKVPERVYSMNPSIRLLLILRDP---SERVLSDYTQVFYNHMQKHKPYPSIEE 176 TP+ T P+ + L +DP SE+ L Q H++ H P+ Sbjct: 104 TPSLVTPPEYASVGSKIFSCFTTFLKSKDPNDGSEKALLTELQALEEHLKAHGPF----- 158 Query: 177 FLVRDGRLNVDYKALNRSLYHV-----HMQNWLRFFPLRHIHIVDGDRLIRDPFPEIQKV 231 + ++ +L LYH+ H + W L ++H R+ F + + Sbjct: 159 --INGQNISAADLSLAPKLYHLQVALEHFKGWKIPEDLTNVHAYTEALFSRESFIKTKAA 216 Query: 232 ERFL--KLSPQINA 243 + L +P++NA Sbjct: 217 KEHLIAGWAPKVNA 230 >5WRJ-A nrPDB Length = 303 Score = 28.1 bits (61), Expect = 4.6, Method: Compositional matrix adjust. Identities = 12/33 (36%), Positives = 17/33 (51%) Query: 52 QQLPQTIIIGVRKGGTRALLEMLSLHPDVAAAE 84 + +P I GV + GT + ML HPD+ E Sbjct: 29 KDMPLIFIGGVPRSGTTLMRAMLDAHPDIRCGE 61 >3AP1-A nrPDB Length = 337 Score = 27.3 bits (59), Expect = 7.6, Method: Compositional matrix adjust. Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 7/58 (12%) Query: 27 QQELLRKAGTLQDDVRDGVAPNGSAQQLPQTIIIGVRKGGTRALLEMLSLHPDVAAAE 84 +QE L GT + R G A +P + GV + GT + ML HP+V E Sbjct: 26 EQEELVMVGTNHVEYRYGKA-------MPLIFVGGVPRSGTTLMRAMLDAHPEVRCGE 76 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 1ZRH-A nrPDB 465 e-131 3UAN-A nrPDB 434 e-122 3BD9-A nrPDB 385 e-107 1T8T-A nrPDB 355 1e-98 1NST-A nrPDB 303 4e-83 3RNL-A nrPDB 215 2e-56 Sequences not found previously or not previously below threshold: 3BFX-A nrPDB 48 5e-06 1Q22-A nrPDB 44 7e-05 1Q1Q-A nrPDB 44 1e-04 4GOX-A nrPDB 43 1e-04 1CJM-A nrPDB 42 4e-04 5X2B-D nrPDB 42 4e-04 4GBM-A nrPDB 40 0.001 2GWH-A nrPDB 40 0.002 1OV4-A nrPDB 40 0.002 2ZVQ-X nrPDB 39 0.003 3U3O-A nrPDB 39 0.004 5MEK-A nrPDB 38 0.006 3AP1-A nrPDB 37 0.009 1NHQ-A nrPDB 37 0.015 4EEC-A nrPDB 36 0.025 1ZD1-A nrPDB 35 0.041 1N7Z-A nrPDB 35 0.045 2REO-A nrPDB 34 0.072 4JVN-A nrPDB 34 0.094 2Z5F-A nrPDB 32 0.26 5WRJ-A nrPDB 31 0.60 5KPW-E nrPDB 30 1.3 2Z0S-A nrPDB 29 2.1 3MGC-A nrPDB 29 2.8 3FG7-A nrPDB 29 2.8 3NIB-A nrPDB 29 3.0 4KK2-A nrPDB 28 4.8 5Y3X-A nrPDB 28 4.9 4KVK-A nrPDB 28 5.4 2Q8F-A nrPDB 28 6.6 4HG2-A nrPDB 27 7.7 1ROA-A nrPDB 27 8.6 >1ZRH-A nrPDB Length = 274 Score = 465 bits (1196), Expect = e-131, Method: Composition-based stats. Identities = 272/274 (99%), Positives = 272/274 (99%) Query: 34 AGTLQDDVRDGVAPNGSAQQLPQTIIIGVRKGGTRALLEMLSLHPDVAAAENEVHFFDWE 93 TLQDDVRDGVAPNGSAQQLPQTIIIGVRKGGTRALLEMLSLHPDVAAAENEVHFFDWE Sbjct: 1 GSTLQDDVRDGVAPNGSAQQLPQTIIIGVRKGGTRALLEMLSLHPDVAAAENEVHFFDWE 60 Query: 94 EHYSHGLGWYLSQMPFSWPHQLTVEKTPAYFTSPKVPERVYSMNPSIRLLLILRDPSERV 153 EHYSHGLGWYLSQMPFSWPHQLTVEKTPAYFTSPKVPERVYSMNPSIRLLLILRDPSERV Sbjct: 61 EHYSHGLGWYLSQMPFSWPHQLTVEKTPAYFTSPKVPERVYSMNPSIRLLLILRDPSERV 120 Query: 154 LSDYTQVFYNHMQKHKPYPSIEEFLVRDGRLNVDYKALNRSLYHVHMQNWLRFFPLRHIH 213 LSDYTQVFYNHMQKHKPYPSIEEFLVRDGRLNVDYKALNRSLYHVHMQNWLRFFPLRHIH Sbjct: 121 LSDYTQVFYNHMQKHKPYPSIEEFLVRDGRLNVDYKALNRSLYHVHMQNWLRFFPLRHIH 180 Query: 214 IVDGDRLIRDPFPEIQKVERFLKLSPQINASNFYFNKTKGFYCLRDSGRDRCLHESKGRA 273 IVDGDRLIRDPFPEIQKVERFLKLSPQINASNFYFNKTKGFYCLRDSGRDRCLHESKGRA Sbjct: 181 IVDGDRLIRDPFPEIQKVERFLKLSPQINASNFYFNKTKGFYCLRDSGRDRCLHESKGRA 240 Query: 274 HPQVDPKLLNKLHEYFHEPNKKFFELVGRTFDWH 307 HPQVDPKLLNKLHEYFHEPNKKFFELVGRTFDWH Sbjct: 241 HPQVDPKLLNKLHEYFHEPNKKFFELVGRTFDWH 274 >3UAN-A nrPDB Length = 269 Score = 434 bits (1117), Expect = e-122, Method: Composition-based stats. Identities = 242/264 (91%), Positives = 253/264 (95%) Query: 44 GVAPNGSAQQLPQTIIIGVRKGGTRALLEMLSLHPDVAAAENEVHFFDWEEHYSHGLGWY 103 G A NGS QQLPQTIIIGVRKGGTRALLEMLSLHPDVAAAENEVHFFDWEEHYS GLGWY Sbjct: 6 GTASNGSTQQLPQTIIIGVRKGGTRALLEMLSLHPDVAAAENEVHFFDWEEHYSQGLGWY 65 Query: 104 LSQMPFSWPHQLTVEKTPAYFTSPKVPERVYSMNPSIRLLLILRDPSERVLSDYTQVFYN 163 L+QMPFS PHQLTVEKTPAYFTSPKVPER++SMNP+IRLLLILRDPSERVLSDYTQV YN Sbjct: 66 LTQMPFSSPHQLTVEKTPAYFTSPKVPERIHSMNPTIRLLLILRDPSERVLSDYTQVLYN 125 Query: 164 HMQKHKPYPSIEEFLVRDGRLNVDYKALNRSLYHVHMQNWLRFFPLRHIHIVDGDRLIRD 223 H+QKHKPYP IE+ L+RDGRLN+DYKALNRSLYH HM NWLRFFPL HIHIVDGDRLIRD Sbjct: 126 HLQKHKPYPPIEDLLMRDGRLNLDYKALNRSLYHAHMLNWLRFFPLGHIHIVDGDRLIRD 185 Query: 224 PFPEIQKVERFLKLSPQINASNFYFNKTKGFYCLRDSGRDRCLHESKGRAHPQVDPKLLN 283 PFPEIQKVERFLKLSPQINASNFYFNKTKGFYCLRDSG+DRCLHESKGRAHPQVDPKLL+ Sbjct: 186 PFPEIQKVERFLKLSPQINASNFYFNKTKGFYCLRDSGKDRCLHESKGRAHPQVDPKLLD 245 Query: 284 KLHEYFHEPNKKFFELVGRTFDWH 307 KLHEYFHEPNKKFF+LVGRTFDWH Sbjct: 246 KLHEYFHEPNKKFFKLVGRTFDWH 269 >3BD9-A nrPDB Length = 280 Score = 385 bits (989), Expect = e-107, Method: Composition-based stats. Identities = 141/267 (52%), Positives = 194/267 (72%), Gaps = 4/267 (1%) Query: 44 GVAPNGS-AQQLPQTIIIGVRKGGTRALLEMLSLHPDVAAAENEVHFFDWEEHYSHGLGW 102 G+ P GS QQLP+ IIIGVRKGGTRALLEML+LHP V A E+HFFD +E+Y G+ W Sbjct: 13 GLVPRGSHMQQLPKAIIIGVRKGGTRALLEMLNLHPAVVKASQEIHFFDNDENYGKGIEW 72 Query: 103 YLSQMPFSWPHQLTVEKTPAYFTSPKVPERVYSMNPSIRLLLILRDPSERVLSDYTQVFY 162 Y +MPFS+P Q+T+EK+PAYF + +VPER+Y MN SI+LL+I+R+P+ R +SDYTQV Sbjct: 73 YRKKMPFSYPQQITIEKSPAYFITEEVPERIYKMNSSIKLLIIVREPTTRAISDYTQVLE 132 Query: 163 NHMQKHKPYPSIEEFLV--RDGRLNVDYKALNRSLYHVHMQNWLRFFPLRHIHIVDGDRL 220 +K+K Y E+ + +N YKA+ S+Y H++ WL++FP+ H+VDGDRL Sbjct: 133 GKERKNKTYYKFEKLAIDPNTCEVNTKYKAVRTSIYTKHLERWLKYFPIEQFHVVDGDRL 192 Query: 221 IRDPFPEIQKVERFLKLSPQINASNFYFNKTKGFYCLR-DSGRDRCLHESKGRAHPQVDP 279 I +P PE+Q VE+FL L P+I+ N YFN T+GFYCLR + ++CL SKGR HP+VDP Sbjct: 193 ITEPLPELQLVEKFLNLPPRISQYNLYFNATRGFYCLRFNEIFNKCLAGSKGRIHPEVDP 252 Query: 280 KLLNKLHEYFHEPNKKFFELVGRTFDW 306 ++ KL ++FH N+KF+++ GRT +W Sbjct: 253 SVITKLRKFFHPFNQKFYQITGRTLNW 279 >1T8T-A nrPDB Length = 271 Score = 355 bits (912), Expect = 1e-98, Method: Composition-based stats. Identities = 112/263 (42%), Positives = 164/263 (62%), Gaps = 12/263 (4%) Query: 50 SAQQLPQTIIIGVRKGGTRALLEMLSLHPDVAAAENEVHFFDWEEHYSHGLGWYLSQMPF 109 ++QLPQ IIIGV+KGGTRALLE L +HPDV A E HFFD Y GL WY MP Sbjct: 13 GSKQLPQAIIIGVKKGGTRALLEFLRVHPDVRAVGAEPHFFD--RSYDKGLAWYRDLMPR 70 Query: 110 SWPHQLTVEKTPAYFTSPKVPERVYSMNPSIRLLLILRDPSERVLSDYTQVFYNHMQKHK 169 + Q+T+EKTP+YF + + P R+ +M+ +L++++RDP R +SDYTQ + K Sbjct: 71 TLDGQITMEKTPSYFVTREAPARISAMSKDTKLIVVVRDPVTRAISDYTQT----LSKRP 126 Query: 170 PYPSIEEFLVRD---GRLNVDYKALNRSLYHVHMQNWLRFFPLRHIHIVDGDRLIRDPFP 226 P+ E ++ G ++ + A+ +Y H+++WLR FP+R + V G+RLI DP Sbjct: 127 DIPTFESLTFKNRTAGLIDTSWSAIQIGIYAKHLEHWLRHFPIRQMLFVSGERLISDPAG 186 Query: 227 EIQKVERFLKLSPQINASNFYFNKTKGFYCLRD---SGRDRCLHESKGRAHPQVDPKLLN 283 E+ +V+ FL L I +FYFNKTKGF CL+ S R CL ++KGR HP++D +++ Sbjct: 187 ELGRVQDFLGLKRIITDKHFYFNKTKGFPCLKKAEGSSRPHCLGKTKGRTHPEIDREVVR 246 Query: 284 KLHEYFHEPNKKFFELVGRTFDW 306 +L E++ N KF+++ G F W Sbjct: 247 RLREFYRPFNLKFYQMTGHDFGW 269 >1NST-A nrPDB Length = 325 Score = 303 bits (777), Expect = 4e-83, Method: Composition-based stats. Identities = 79/280 (28%), Positives = 136/280 (48%), Gaps = 29/280 (10%) Query: 42 RDGVAPNGSAQQLPQTIIIGVRKGGTRALLEMLSLHPDVAA------AENEVHFFDWEEH 95 +D + + + P+ +IIG +K GT AL L +HPD+++ E+ FF+ + Sbjct: 35 KDIWSKEKTCDRFPKLLIIGPQKTGTTALYLFLGMHPDLSSNYPSSETFEEIQFFN-GHN 93 Query: 96 YSHGLGWYLSQMPFSWPHQLT----VEKTPAYFTSPKVPERVYSMNPSIRLLLILRDPSE 151 Y G+ WY+ P P T EK+ YF S P R ++ P ++L IL +P++ Sbjct: 94 YHKGIDWYMEFFPI--PSNTTSDFYFEKSANYFDSEVAPRRAAALLPKAKVLTILINPAD 151 Query: 152 RVLSDYTQVFYNHMQKHKPY----PSIEEFLVRDGRLNVDYKAL-NRSL----YHVHMQN 202 R S +Y H + H + E + + +AL NR L Y H++ Sbjct: 152 RAYS-----WYQHQRAHDDPVALKYTFHEVITAGSDASSKLRALQNRCLVPGWYATHIER 206 Query: 203 WLRFFPLRHIHIVDGDRLIRDPFPEIQKVERFLKLSPQINA-SNFYFNKTKGFYC-LRDS 260 WL + I ++DG L +P + V++FL ++ I+ F+ KGF+C L + Sbjct: 207 WLSAYHANQILVLDGKLLRTEPAKVMDMVQKFLGVTNTIDYHKTLAFDPKKGFWCQLLEG 266 Query: 261 GRDRCLHESKGRAHPQVDPKLLNKLHEYFHEPNKKFFELV 300 G+ +CL +SKGR +P++D L +Y+ + N + +L+ Sbjct: 267 GKTKCLGKSKGRKYPEMDLDSRAFLKDYYRDHNIELSKLL 306 >3RNL-A nrPDB Length = 311 Score = 215 bits (547), Expect = 2e-56, Method: Composition-based stats. Identities = 63/304 (20%), Positives = 115/304 (37%), Gaps = 52/304 (17%) Query: 47 PNGSAQQLPQTIIIGVRKGGTRALLEMLSLHPDV-AAAENEVHFF---DWEEHYS----H 98 N P I+G K GT +L LS HPD+ + E HFF D+ E ++ Sbjct: 1 SNAMGVARPNFFIVGAAKCGTSSLDRYLSQHPDIYIPPKKEAHFFSIPDFPERFTGPGDE 60 Query: 99 GLGWYLSQMPFSW--------PHQLTVEKTPAYFTSPKVPERVYSMNPSIRLLLILRDPS 150 G+ Y + ++ + E + Y P +R+Y P ++L++LR+P Sbjct: 61 GMNLYTIRDEDAYMRLFDGVRGERAVGEASVFYLFYPGTAQRMYDAYPDAKILIMLRNPV 120 Query: 151 ERVLSDYTQVFYNHMQKHKPYPSIEEFLVR-DGRLNVDYKAL----NRSLYHVHMQNWLR 205 +R S Y + ++ + S E L + + R+ Y+ L LY ++ +L Sbjct: 121 DRAFSAYMHL----VRDERETLSFRESLAKEEERIRQHYEPLWYYRAVGLYAAQVKRYLD 176 Query: 206 FFPLRHIHIVDGDRLIRDPFPEIQKVERFLKLS------PQINASNFYFNKTKGFY---- 255 F + ++ + RDP ++ FL +S I + K++ Y Sbjct: 177 VFGREQVKVILFEEFARDPVQVVRDCCAFLGVSTDFVPDTSIRHNESGVPKSRSLYNFIA 236 Query: 256 ---------------CLRDSGRDRCLHESKGRAHPQVDPKLLNKLHEYFHEPNKKFFELV 300 +R+ +R GR +++P L +L +F + L+ Sbjct: 237 KPNALKEIVKPFIPAAVRERLGNRAKSMVLGRM--EMEPDLREELTAFFAPDVARLEALI 294 Query: 301 GRTF 304 R Sbjct: 295 HRDL 298 >3BFX-A nrPDB Length = 296 Score = 48.1 bits (113), Expect = 5e-06, Method: Composition-based stats. Identities = 46/227 (20%), Positives = 88/227 (38%), Gaps = 25/227 (11%) Query: 20 SRPAELGQQELLRK--AGTLQDDVRDGVAPNGSAQQLPQ-TIIIGVRKGGTRALLE---M 73 S ++LG+Q L++ LQ D + S + P +I K GT + E M Sbjct: 2 SLTSDLGKQIKLKEVEGTLLQPATVDNWSQIQSFEAKPDDLLICTYPKAGTTWIQEIVDM 61 Query: 74 LSLHPDVAAAENEVHFFDWEEHYSHGLGWYLSQMPFSWPHQLTVEKTP----AYFTSPKV 129 + + DV + + +H + W P S + +P + ++ + Sbjct: 62 IEQNGDVEKCQRAI-----IQHRHPFIEWARPPQP-SGVEKAKAMPSPRILKTHLSTQLL 115 Query: 130 PERVYSMNPSIRLLLILRDPSERVLSDYTQVFYNHMQKHKPYPSIEEFLVRDGRLNVDYK 189 P + N + L + R+ + ++S Y NHM + EE+ + +N Sbjct: 116 PPSFWENN--CKFLYVARNAKDCMVSYYHFQRMNHML--PDPGTWEEYF--ETFINGK-- 167 Query: 190 ALNRSLYHVHMQNWLRFFPLRHIHIVDGDRLIRDPFPEIQKVERFLK 236 + + H++ W I + + + RDP EI+KV +F+ Sbjct: 168 -VVWGSWFDHVKGWWEMKDRHQILFLFYEDIKRDPKHEIRKVMQFMG 213 >1Q22-A nrPDB Length = 299 Score = 44.3 bits (103), Expect = 7e-05, Method: Composition-based stats. Identities = 20/134 (14%), Positives = 47/134 (35%), Gaps = 17/134 (12%) Query: 107 MPFSWPHQLTVEKTPAYFTSPKVPERVYSMNPSIRLLLILRDPSERVLSDYTQVFYNHMQ 166 +P + +L P + + +++ + R+P + V+S Y Sbjct: 100 LPDQYSPRLMSSHLPIQIFTK------AFFSSKAKVIYMGRNPRDVVVSLYHYSKIAGQL 153 Query: 167 KHKPYPS--IEEFLVRDGRLNVDYKALNRSLYHVHMQNWLRFFPLRHIHIVDGDRLIRDP 224 K P + +FL + + + H++ WLR + + + L +D Sbjct: 154 KDPGTPDQFLRDFLKGE---------VQFGSWFDHIKGWLRMKGKDNFLFITYEELQQDL 204 Query: 225 FPEIQKVERFLKLS 238 ++++ FL Sbjct: 205 QGSVERICGFLGRP 218 >1Q1Q-A nrPDB Length = 350 Score = 43.5 bits (101), Expect = 1e-04, Method: Composition-based stats. Identities = 20/134 (14%), Positives = 47/134 (35%), Gaps = 17/134 (12%) Query: 107 MPFSWPHQLTVEKTPAYFTSPKVPERVYSMNPSIRLLLILRDPSERVLSDYTQVFYNHMQ 166 +P + +L P + + +++ + R+P + V+S Y Sbjct: 98 LPDQYSPRLMSSHLPIQIFTK------AFFSSKAKVIYMGRNPRDVVVSLYHYSKIAGQL 151 Query: 167 KHKPYPS--IEEFLVRDGRLNVDYKALNRSLYHVHMQNWLRFFPLRHIHIVDGDRLIRDP 224 K P + +FL + + + H++ WLR + + + L +D Sbjct: 152 KDPGTPDQFLRDFLKGE---------VQFGSWFDHIKGWLRMKGKDNFLFITYEELQQDL 202 Query: 225 FPEIQKVERFLKLS 238 ++++ FL Sbjct: 203 QGSVERICGFLGRP 216 >4GOX-A nrPDB Length = 313 Score = 43.1 bits (100), Expect = 1e-04, Method: Composition-based stats. Identities = 50/230 (21%), Positives = 84/230 (36%), Gaps = 30/230 (13%) Query: 36 TLQDDVRDGVAPNGSAQQLPQTIIIGVRKGGTRALLEMLSLHPDVAAAENEVHFFDWE-- 93 +L + P I+ + G+ L ML+ HP + + E+H +E Sbjct: 6 SLSVKTKKQWQKPDHKNPNPIAFILSSPRSGSTLLRVMLAGHPGLYSP-PELHLLPFETM 64 Query: 94 --EHYSHGLGWYLSQMPFSWP--HQLTVEKTPAYFT------SPKVPERVYSMNPSIRLL 143 H GL + + LT E + A +P Y + + L Sbjct: 65 GDRHQELGLSHLGEGLQRALMDLENLTPEASQAKVNQWVKANTPIADIYAYLQRQAEQRL 124 Query: 144 LILRDPS---ERVLSDYTQVF-----YNHMQKHKPYPSIEEFLVRD-----GRLNVDYKA 190 LI + PS +R + D++++ Y H+ +H PY IE F G + A Sbjct: 125 LIDKSPSYGSDRHILDHSEILFDQAKYIHLVRH-PYAVIESFTRLRMDKLLGAEQQNPYA 183 Query: 191 LNRSLYHVHMQNWL---RFFPLRHIHIVDGDRLIRDPFPEIQKVERFLKL 237 L S++ +N L R V + L+RDP + + FL + Sbjct: 184 LAESIWRTSNRNILDLGRTVGADRYLQVIYEDLVRDPRKVLTNICDFLGV 233 >1CJM-A nrPDB Length = 295 Score = 42.0 bits (97), Expect = 4e-04, Method: Composition-based stats. Identities = 40/212 (18%), Positives = 79/212 (37%), Gaps = 19/212 (8%) Query: 33 KAGTLQDDVRDGVAPNGSAQQLPQTIIIGV-RKGGTR---ALLEMLSLHPDVAAAENEVH 88 K L + + P S Q P ++I K GT +L+M+ D+ Sbjct: 16 KGVPLIKYFAEALGPLQSFQARPDDLLINTYPKSGTTWVSQILDMIYQGGDLEKCNRAPI 75 Query: 89 FFDWE--EHYSHGLGWYLSQMPFSWPHQLTVEKTPAYFTSPKVPERVYSMNPSIRLLLIL 146 + E G L + + P +L P P+ + ++ ++++ + Sbjct: 76 YVRVPFLEVNDPGEPSGLETLKDTPPPRLIKSHLPLALL----PQTL--LDQKVKVVYVA 129 Query: 147 RDPSERVLSDYTQVFYNHMQKHKPYPSIEEFLVRDGRLNVDYKALNRSLYHVHMQNWLRF 206 R+P + +S Y F+ + H + + FL + V Y ++ H+Q W Sbjct: 130 RNPKDVAVSYYH--FHRMEKAHPEPGTWDSFLEKFMAGEVSY-----GSWYQHVQEWWEL 182 Query: 207 FPLRHIHIVDGDRLIRDPFPEIQKVERFLKLS 238 + + + + +P EIQK+ F+ S Sbjct: 183 SRTHPVLYLFYEDMKENPKREIQKILEFVGRS 214 >5X2B-D nrPDB Length = 281 Score = 41.6 bits (96), Expect = 4e-04, Method: Composition-based stats. Identities = 26/186 (13%), Positives = 64/186 (34%), Gaps = 33/186 (17%) Query: 58 IIIGVRKGGTRALLEMLSLHPDVAAAENEVHFFDWEEHYSHGLGWYLSQMPFSWPHQLTV 117 ++ K GT L E++ PD + L ++P Sbjct: 34 FLVSYPKSGTHWLAEVIERIPDAGITLTSPIELGDISKFEE-----LKRIPKR------- 81 Query: 118 EKTPAYFTSPKVPERVYSMNPSIRLLLILRDPSERVLSDYTQVFYNHMQKHKPYPSIE-- 175 P + +P V +++ I+R+P + +S +++ + + PS E Sbjct: 82 RAIPTHLNYEMLP--VTVKQKQCKIIYIVRNPKDTAVS-----MFHYYRDNPNLPSTETW 134 Query: 176 ----EFLVRDGRLNVDYKALNRSLYHVHMQNWLRFFPLRHIHIVDGDRLIRDPFPEIQKV 231 E ++ + + H+ +W +++ + + + +D ++K+ Sbjct: 135 AAFLELFLKGDVVYGSW--------FDHVLSWEEHKNDKNVLFIFYEEMKKDFVKSLKKI 186 Query: 232 ERFLKL 237 FL + Sbjct: 187 TAFLGI 192 >4GBM-A nrPDB Length = 323 Score = 40.0 bits (92), Expect = 0.001, Method: Composition-based stats. Identities = 21/128 (16%), Positives = 52/128 (40%), Gaps = 19/128 (14%) Query: 114 QLTVEKTPAYFTSPKVPERVYSMNPSIRLLLILRDPSERVLSDYTQVFYNH---MQKHKP 170 +L V+K+P Y P + ER ++ + + + ++R P V+ + ++ + + P Sbjct: 131 RLLVDKSPTYAMEPTILERGEALFANSKYIYLVRHPYS-VIESFVRMRMQKLVGLGEENP 189 Query: 171 YPSIEEFLVRDGRLNVDYKALNRSLYHVHMQNWLRFFPLRHIHIVDGDRLIRDPFPEIQK 230 Y E+ + + ++ N+L H + + L++ P + + Sbjct: 190 YRVAEQVWAKSNQ---------------NILNFLSQLEPERQHQIRYEDLVKKPQQVLSQ 234 Query: 231 VERFLKLS 238 + FL + Sbjct: 235 LCDFLNVP 242 >2GWH-A nrPDB Length = 298 Score = 39.7 bits (91), Expect = 0.002, Method: Composition-based stats. Identities = 42/209 (20%), Positives = 78/209 (37%), Gaps = 20/209 (9%) Query: 35 GTLQ-DDVRDGVAPNGSAQQLPQTIIIGV-RKGGTR---ALLEMLSLHPDVAAAENEV-- 87 G LQ D D + Q P ++I K GT ++E++ DV ++ Sbjct: 20 GILQPTDTCDIWDKIWNFQAKPDDLLISTYPKAGTTWTQEIVELIQNEGDVEKSKRAPTH 79 Query: 88 HFFDWEEHYSHGLGWYLSQMPFSWPHQLTVEKTPAYFTSPKVPERVYSMNPSIRLLLILR 147 F + E LG L Q ++ P + P + E+ + +++ + R Sbjct: 80 QRFPFLEMKIPSLGSGLEQAHAMPSPRILKTHLPFHLLPPSLLEK------NCKIIYVAR 133 Query: 148 DPSERVLSDYTQVFYNHMQKHKPYPSIEEFLVRDGRLNVDYKALNRSLYHVHMQNWLRFF 207 +P + ++S Y + M K P P E + +H H++ W Sbjct: 134 NPKDNMVSYY---HFQRMNKALPAPGTWEEYFETFLAGK----VCWGSWHEHVKGWWEAK 186 Query: 208 PLRHIHIVDGDRLIRDPFPEIQKVERFLK 236 I + + + ++P EIQK+ F+ Sbjct: 187 DKHRILYLFYEDMKKNPKHEIQKLAEFIG 215 >1OV4-A nrPDB Length = 293 Score = 39.7 bits (91), Expect = 0.002, Method: Composition-based stats. Identities = 20/100 (20%), Positives = 47/100 (47%), Gaps = 7/100 (7%) Query: 137 NPSIRLLLILRDPSERVLSDYTQVFYNHMQKHKPYPSIEEFLVRDGRLNVDYKALNRSLY 196 + +++ ++R+P + ++S Y F+ +M+ K S EE+ + V Y + Sbjct: 119 SSKAKVIYLMRNPRDVLVSGY--FFWKNMKFIKKPKSWEEYFEWFCQGTVLY-----GSW 171 Query: 197 HVHMQNWLRFFPLRHIHIVDGDRLIRDPFPEIQKVERFLK 236 H+ W+ ++ ++ + L +D I+K+ +FL Sbjct: 172 FDHIHGWMPMREEKNFLLLSYEELKQDTGRTIEKICQFLG 211 >2ZVQ-X nrPDB Length = 295 Score = 38.9 bits (89), Expect = 0.003, Method: Composition-based stats. Identities = 24/111 (21%), Positives = 48/111 (43%), Gaps = 9/111 (8%) Query: 139 SIRLLLILRDPSERVLSDYTQVFYNHMQKHKPYPSIEEFLVRDGRLNVDYKALNRSLYHV 198 +++ + R+ + V+S Y FY + H + EEFL + V + ++ Sbjct: 122 DCKIIYVARNAKDVVVSYY--YFYQMAKIHPEPGTWEEFLEKFMAGQVSFGP-----WYD 174 Query: 199 HMQNWLRFFPLRHIHIVDGDRLIRDPFPEIQKVERFL--KLSPQINASNFY 247 H+++W I + + + +P EIQK+ +FL + +I Y Sbjct: 175 HVKSWWEKRKEYRILYLFYEDMKENPKCEIQKILKFLEKDIPEEILNKILY 225 >3U3O-A nrPDB Length = 315 Score = 38.5 bits (88), Expect = 0.004, Method: Composition-based stats. Identities = 38/210 (18%), Positives = 79/210 (37%), Gaps = 19/210 (9%) Query: 33 KAGTLQDDVRDGVAPNGSAQQLPQTIIIGV-RKGGTR---ALLEMLSLHPDVAAAENEVH 88 K L + + P S Q P ++I K GT +L+M+ D+ Sbjct: 36 KGVPLIKYFAEALGPLQSFQARPDDLLISTYPKSGTTWVSQILDMIYQGGDLEKCHRAPI 95 Query: 89 FFDWE--EHYSHGLGWYLSQMPFSWPHQLTVEKTPAYFTSPKVPERVYSMNPSIRLLLIL 146 F E + G+ + + + +L P P+ + ++ ++++ + Sbjct: 96 FMRVPFLEFKAPGIPSGMETLKDTPAPRLLKTHLPLALL----PQTL--LDQKVKVVYVA 149 Query: 147 RDPSERVLSDYTQVFYNHMQKHKPYPSIEEFLVRDGRLNVDYKALNRSLYHVHMQNWLRF 206 R+ + +S Y FY+ + H + + FL + V Y ++ H+Q W Sbjct: 150 RNAKDVAVSYYH--FYHMAKVHPEPGTWDSFLEKFMVGEVSY-----GSWYQHVQEWWEL 202 Query: 207 FPLRHIHIVDGDRLIRDPFPEIQKVERFLK 236 + + + + +P EIQK+ F+ Sbjct: 203 SRTHPVLYLFYEDMKENPKREIQKILEFVG 232 >5MEK-A nrPDB Length = 322 Score = 37.7 bits (86), Expect = 0.006, Method: Composition-based stats. Identities = 35/200 (17%), Positives = 68/200 (34%), Gaps = 32/200 (16%) Query: 52 QQLPQ-TIIIGVRKGGTRALLEMLSLHPDVAAAENEVHFFD-----WEEHYSHGLGWYLS 105 Q P ++ K GT L + A N F D + + + + Sbjct: 55 QARPSDFLVCSYPKTGTTWLKAL------TFAIANRSRFDDSSNPLLKRNPHEFVPYIEI 108 Query: 106 QMPFSWPHQLTVEKTPAYFTSPKVPERVYSMNPSI------RLLLILRDPSERVLSDYTQ 159 PF +P ++ S +P Y + P +++ I R+P + +S +T Sbjct: 109 DFPF-FPEVDVLKDKGNTLFSTHIP---YELLPDSVVKSGCKMVYIWREPKDTFISMWT- 163 Query: 160 VFYNHMQKHKPYPS-IEEFLVRDGRLNVDYKALNRSLYHVHMQNWLRFFPLR--HIHIVD 216 F + + S +EE R Y Y H+ + + + I + Sbjct: 164 -FLHKERTELGPVSNLEESFDMFCRGLSGYGP-----YLNHILAYWKAYQENPDRILFLK 217 Query: 217 GDRLIRDPFPEIQKVERFLK 236 + + DP P ++ + F+ Sbjct: 218 YETMRADPLPYVKSLAEFMG 237 >3AP1-A nrPDB Length = 337 Score = 37.4 bits (85), Expect = 0.009, Method: Composition-based stats. Identities = 35/213 (16%), Positives = 64/213 (30%), Gaps = 43/213 (20%) Query: 51 AQQLPQTIIIGVRKGGTRALLEMLSLHPDVA-------------------AAENEVHFFD 91 + +P + GV + GT + ML HP+V + E D Sbjct: 43 GKAMPLIFVGGVPRSGTTLMRAMLDAHPEVRCGEETRIIPRVLAMRQAWSKSGREKLRLD 102 Query: 92 WEEHYSHGLGWYLSQM------PFSWPHQLTVEKTPAYFTSPKVPERVYSMNPSIRLLLI 145 L + P ++ K P S R++ P+ + LL+ Sbjct: 103 EAGVTDEVLDAAMQAFILEVIAKHGEPARVLCNKDPFTLKSSVYLSRLF---PNSKFLLM 159 Query: 146 LRDPSERVLSDYTQVFYNHMQKHKPYPSIEEFLVRDGRLNVDYKALNRSLYHVHMQNWLR 205 +RD V S T+ + RD + +Y M+ Sbjct: 160 VRDGRASVHSMITRKV--------TIAGFDLSSYRDCL--TKWNKAIEVMYAQCME---- 205 Query: 206 FFPLRHIHIVDGDRLIRDPFPEIQKVERFLKLS 238 V ++L+ P ++ + FL ++ Sbjct: 206 -VGKEKCLPVYYEQLVLHPRRSLKLILDFLGIA 237 >1NHQ-A nrPDB Length = 447 Score = 36.6 bits (83), Expect = 0.015, Method: Composition-based stats. Identities = 22/93 (23%), Positives = 41/93 (44%), Gaps = 15/93 (16%) Query: 56 QTIIIGVRKGGTRALLEMLSLHPDVAAAENEVHFF---DWEEHYSHGLGWYLSQMPFSWP 112 + I++G GG A+ E+L+LHPD E+ ++ D+ S G+ YL Sbjct: 2 KVIVLGSSHGGYEAVEELLNLHPD-----AEIQWYEKGDFISFLSSGMQLYLE------- 49 Query: 113 HQLTVEKTPAYFTSPKVPERVYSMNPSIRLLLI 145 ++ + Y T K+ R ++ + + I Sbjct: 50 GKVKDVNSVRYMTGEKMESRGVNVFSNTEITAI 82 >4EEC-A nrPDB Length = 286 Score = 35.8 bits (81), Expect = 0.025, Method: Composition-based stats. Identities = 27/134 (20%), Positives = 58/134 (43%), Gaps = 8/134 (5%) Query: 108 PFSWPHQLTVEKTPAYFTSPKVPERVYSMNPSIRLLLILRDPSERVLSDYTQVFYNHMQK 167 P + P + + T +FT+ + R Y + +++ ++R+P + +LS ++ + Sbjct: 70 PSADPDEQVLLAT--HFTADRPVLRFYR-ESTAKVVCLIRNPRDAMLS-LMRMKGIPPED 125 Query: 168 HKPYPSIEEFLVRDGRLNVDYKALNRSLYHVHMQNWLRF----FPLRHIHIVDGDRLIRD 223 + I E + D + + ++++W FP + V + L +D Sbjct: 126 VEACRKIAETFIADEGFSSVRIWAGEGSWPENIRSWTDSVHESFPNAAVLAVRYEDLRKD 185 Query: 224 PFPEIQKVERFLKL 237 P E+ KV FL+L Sbjct: 186 PEGELWKVVDFLEL 199 >1ZD1-A nrPDB Length = 284 Score = 35.0 bits (79), Expect = 0.041, Method: Composition-based stats. Identities = 20/117 (17%), Positives = 51/117 (43%), Gaps = 9/117 (7%) Query: 122 AYFTSPKVPERVYSMNPSIRLLLILRDPSERVLSDYTQVFYNHMQKHKPYPSIEEFLVRD 181 ++ +P ++ N +++ + R+P + V+S Y F+ ++ + +EF R Sbjct: 110 SHLPYRFLPSDLH--NGDSKVIYMARNPKDLVVSYYQ--FHRSLRTMSYRGTFQEFCRRF 165 Query: 182 GRLNVDYKALNRSLYHVHMQNWLRFFPLRHIHIVDGDRLIRDPFPEIQKVERFLKLS 238 + Y + H+Q + ++ + + + RD ++++ RFL +S Sbjct: 166 MNDKLGY-----GSWFEHVQEFWEHRMDSNVLFLKYEDMHRDLVTMVEQLARFLGVS 217 >1N7Z-A nrPDB Length = 334 Score = 35.0 bits (79), Expect = 0.045, Method: Composition-based stats. Identities = 34/170 (20%), Positives = 52/170 (30%), Gaps = 22/170 (12%) Query: 27 QQELLRKAGTLQDDVRDGVAPNGSAQQLPQTIIIGVRKGGTRALLEML-SLHPDVA--AA 83 + E L+ G R P G G + G + E L + PDV+ Sbjct: 150 KDECLKLGGKWTPSARSMTPPEGRGDAE------GTIEPGDGYVWEYLFEIPPDVSINRC 203 Query: 84 ENEVHFFDWEEH---------YSHGLGWYLSQMPFSWPHQLTVEKTPAYFTSPKVPERVY 134 NE W E Y L W + + + AY S PE Sbjct: 204 TNEYIVVPWPEELKEDPTRWGYEDNLTWQQDDFGLIYRVKANTIRFKAYLDSVYFPEAAL 263 Query: 135 SMNPSIRLLLILRDPSERVLSDYTQVFYNHMQKHKPYPSIEEFLVRDGRL 184 N R + I+ +P E +++ K Y E+ + G + Sbjct: 264 PGNKGFRQISIITNPLE----AKAHPNDPNVKAEKDYYDPEDLMRHSGEM 309 >2REO-A nrPDB Length = 305 Score = 34.3 bits (77), Expect = 0.072, Method: Composition-based stats. Identities = 36/206 (17%), Positives = 76/206 (36%), Gaps = 30/206 (14%) Query: 42 RDGVAPNGSAQQLPQTIIIGV-RKGGTRALLEMLSL---HPDVAAAEN----EVHFF--- 90 ++ + Q P +I+ K GT + E+L + DV + + H F Sbjct: 34 KEWWEKVANFQAKPDDLILATYPKSGTTWMHEILDMILNDGDVEKCKRAQTLDRHAFLEL 93 Query: 91 DWEEHYSHGLGWYLSQMPFSWPHQLTVEKTPAYFTSPKVPERVYSMNPSIRLLLILRDPS 150 + L + L S P QL P++ P + + + +++ + R+P Sbjct: 94 KFPHKEKPDLEFVLEM---SSP-QLIKTHLPSHLIPPSIWKE------NCKIVYVARNPK 143 Query: 151 ERVLSDY-TQVFYNHMQKHKPYPSIEEFLVRDGRLNVDYKALNRSLYHVHMQNWLRFFPL 209 + ++S Y + M + E + + + H++ W + Sbjct: 144 DCLVSYYHFHRMASFMPDPQNLEEFYEKFMSGKVVGGSW--------FDHVKGWWAAKDM 195 Query: 210 RHIHIVDGDRLIRDPFPEIQKVERFL 235 I + + + +DP EI+K+ +FL Sbjct: 196 HRILYLFYEDIKKDPKREIEKILKFL 221 >4JVN-A nrPDB Length = 294 Score = 33.9 bits (76), Expect = 0.094, Method: Composition-based stats. Identities = 19/102 (18%), Positives = 42/102 (41%), Gaps = 7/102 (6%) Query: 138 PSIRLLLILRDPSERVLSDYTQVFYNHMQKHKPYPSIEEFLVRDGRLNVDYKALNRSLYH 197 +++ + R+ + +S Y F+ + H S EF+ + + V Y ++ Sbjct: 120 KDCKIIYLCRNAKDVAVSFY--YFFLMVAGHPNPGSFPEFVEKFMQGQVPY-----GSWY 172 Query: 198 VHMQNWLRFFPLRHIHIVDGDRLIRDPFPEIQKVERFLKLSP 239 H+++W + + + L D E+ K+ FL+ P Sbjct: 173 KHVKSWWEKGKSPRVLFLFYEDLKEDIRKEVIKLIHFLERKP 214 >2Z5F-A nrPDB Length = 298 Score = 32.3 bits (72), Expect = 0.26, Method: Composition-based stats. Identities = 21/95 (22%), Positives = 43/95 (45%), Gaps = 7/95 (7%) Query: 141 RLLLILRDPSERVLSDYTQVFYNHMQKHKPYPSIEEFLVRDGRLNVDYKALNRSLYHVHM 200 +++ + R+ + +S Y N++Q + EE+L + V Y + H+ Sbjct: 127 KMIYLARNAKDVSVSYYHFDLMNNLQ--PFPGTWEEYLEKFLTGKVAY-----GSWFTHV 179 Query: 201 QNWLRFFPLRHIHIVDGDRLIRDPFPEIQKVERFL 235 +NW + I + + + +P EI+K+ RFL Sbjct: 180 KNWWKRKEEHPILFLYYEDMKENPKEEIKKIIRFL 214 >5WRJ-A nrPDB Length = 303 Score = 31.2 bits (69), Expect = 0.60, Method: Composition-based stats. Identities = 12/34 (35%), Positives = 17/34 (50%) Query: 52 QQLPQTIIIGVRKGGTRALLEMLSLHPDVAAAEN 85 + +P I GV + GT + ML HPD+ E Sbjct: 29 KDMPLIFIGGVPRSGTTLMRAMLDAHPDIRCGEE 62 >5KPW-E nrPDB Length = 177 Score = 30.0 bits (66), Expect = 1.3, Method: Composition-based stats. Identities = 13/33 (39%), Positives = 21/33 (63%) Query: 38 QDDVRDGVAPNGSAQQLPQTIIIGVRKGGTRAL 70 +D DG A G+A+ L +++IGV +G T+ L Sbjct: 55 RDGYADGWAQAGTARALLNSMVIGVTEGFTKKL 87 >2Z0S-A nrPDB Length = 235 Score = 29.3 bits (64), Expect = 2.1, Method: Composition-based stats. Identities = 13/59 (22%), Positives = 26/59 (44%), Gaps = 1/59 (1%) Query: 195 LYHVHMQNWLRFFPLRHIHIVDGDRLIRDPF-PEIQKVERFLKLSPQINASNFYFNKTK 252 + V + NW ++ ++ + PF P + ++ LK+ I A F+KT+ Sbjct: 74 IQSVGIMNWFVDINSPYVAVLSVQDFLGRPFNPAVDDMQSLLKVGDYIKAKVVAFDKTR 132 >3MGC-A nrPDB Length = 319 Score = 28.9 bits (63), Expect = 2.8, Method: Composition-based stats. Identities = 17/111 (15%), Positives = 42/111 (37%), Gaps = 7/111 (6%) Query: 139 SIRLLLILRDPSERVLSDYTQVFYNHMQKHKPYPSIEEFLVRDGR---LNVDYKALNRSL 195 + ++L ++R+P + +LS + K +F+ +G + Sbjct: 116 TAKVLYLVRNPRDMLLSSMRMASISRDDVEKSRDFARKFIANEGLGWNALGAGGGVGLGS 175 Query: 196 YHVHMQNWL----RFFPLRHIHIVDGDRLIRDPFPEIQKVERFLKLSPQIN 242 + ++++W FP + + + L DP ++ FL L ++ Sbjct: 176 WPENVRSWTESSSDRFPNADVLTMRYEDLKGDPVARFSEIVEFLDLGGPVD 226 >3FG7-A nrPDB Length = 398 Score = 28.9 bits (63), Expect = 2.8, Method: Composition-based stats. Identities = 12/51 (23%), Positives = 16/51 (31%) Query: 63 RKGGTRALLEMLSLHPDVAAAENEVHFFDWEEHYSHGLGWYLSQMPFSWPH 113 +K E L HP E + GW+L+ PF W Sbjct: 335 KKAAATTAQEYLKTHPSGRDPETPIIVVKQGHEPPTFTGWFLAWDPFKWSG 385 >3NIB-A nrPDB Length = 309 Score = 28.9 bits (63), Expect = 3.0, Method: Composition-based stats. Identities = 41/220 (18%), Positives = 79/220 (35%), Gaps = 29/220 (13%) Query: 44 GVAPNGS-------AQQLPQTIIIGVR------KGGTRALLEMLSLHPDVAAAENEVHFF 90 G+ P GS QQ+ + + G+R K G L ML+ + + Sbjct: 13 GLVPRGSHMASMTGGQQMGRGSMNGIRWIASYPKAGNTWLRCMLAAY----ITGKAPQTW 68 Query: 91 DWEEHYS---HGLGWYLSQMPFSWPHQLTVEKTPAYFTSPKVPERVYSMNPSIRLLLILR 147 E S G+ +L MP + P + + KT P + +YS + ++L ++R Sbjct: 69 KDMETVSLELEGM-LHLGDMPPTEPTKPVLVKTHLKADVPVLG--LYS-EATAKVLYLVR 124 Query: 148 DPSERVLSDYTQVFYNHMQKHKPYPSIEEFLVRDGRLNVDYKALNRSL-YHVHMQNWL-- 204 +P + +LS + +F+ +G + +++ W Sbjct: 125 NPRDILLSAMRMTAISRDDMESSRTFARDFIANEGLRMRGRGGGAGLGSWPENVRIWTES 184 Query: 205 --RFFPLRHIHIVDGDRLIRDPFPEIQKVERFLKLSPQIN 242 FP + + + L DP ++ FL L ++ Sbjct: 185 SRDRFPNADVLTMRYEDLKGDPVARFSEIVEFLDLGDPVD 224 >4KK2-A nrPDB Length = 366 Score = 28.1 bits (61), Expect = 4.8, Method: Composition-based stats. Identities = 11/39 (28%), Positives = 20/39 (51%), Gaps = 4/39 (10%) Query: 257 LRDSGRDRCLHESKGRAHPQVDPKLLNKLHEYFHEPNKK 295 L + + + LHE+ G+ DP + K+ E +H N + Sbjct: 290 LANEEQKKTLHENYGKK----DPASVAKVKEVYHTLNLQ 324 >5Y3X-A nrPDB Length = 357 Score = 28.1 bits (61), Expect = 4.9, Method: Composition-based stats. Identities = 12/39 (30%), Positives = 19/39 (48%), Gaps = 6/39 (15%) Query: 272 RAHPQ---VDPKLLNKLHEYFHEPNKKFFELVGRTFDWH 307 R HP + ++K+ E+ + N K + G TF WH Sbjct: 76 RIHPDEHRYNFDAVDKMKEFAIKNNMK---MRGHTFVWH 111 >4KVK-A nrPDB Length = 621 Score = 28.1 bits (61), Expect = 5.4, Method: Composition-based stats. Identities = 9/42 (21%), Positives = 18/42 (42%), Gaps = 5/42 (11%) Query: 75 SLHPDVAAAENEVHFFD-----WEEHYSHGLGWYLSQMPFSW 111 S+HPD+ +++ FFD + + W+ +P Sbjct: 12 SVHPDLRDVFSKMSFFDKIGFLFIHAFDKRNLWHKVPVPIGL 53 >2Q8F-A nrPDB Length = 407 Score = 27.7 bits (60), Expect = 6.6, Method: Composition-based stats. Identities = 26/121 (21%), Positives = 48/121 (39%), Gaps = 14/121 (11%) Query: 118 EKTPAYFTSPKVPERVYSMNPSIRLL--LILRDPSERVLSDYTQVFYNHMQKHKPYPSIE 175 EKT F ++P R+ ++ I LL +LR PS +++ Q +Y +Q + + Sbjct: 43 EKTSFMFLRQELPVRLANIMKEISLLPDNLLRTPSVQLV----QSWY--IQSLQELLDFK 96 Query: 176 EFLVRDGRLNVDYKALNRSLYHVHMQNWLRFFPLRHIHIVDGDR-LIRDPFPEIQKVERF 234 + D + D+ + + H P +++ DP Q V+ F Sbjct: 97 DKSAEDAKAIYDFTDTVIRIRNRHN----DVIPTMAQGVIEYKESFGVDPVTS-QNVQYF 151 Query: 235 L 235 L Sbjct: 152 L 152 >4HG2-A nrPDB Length = 257 Score = 27.3 bits (59), Expect = 7.7, Method: Composition-based stats. Identities = 15/74 (20%), Positives = 30/74 (40%), Gaps = 3/74 (4%) Query: 156 DYTQVFYNHMQKHKPYPSIEEFLVRDGRLNVDYKALNRSLYHVHMQNWLRFFPLRHIHIV 215 D + + + +P R++ + A+ LYH + +P +H+ Sbjct: 113 DLDRFWAELRRVARPGAVFAAVTYGLTRVDPEVDAVVDRLYHGLLAR---DWPPERVHVE 169 Query: 216 DGDRLIRDPFPEIQ 229 G R + PFPE++ Sbjct: 170 SGYRTLPFPFPELE 183 >1ROA-A nrPDB Length = 122 Score = 27.3 bits (59), Expect = 8.6, Method: Composition-based stats. Identities = 12/77 (15%), Positives = 26/77 (33%), Gaps = 11/77 (14%) Query: 182 GRLNVDYKALNRSLYH-----VHMQNWLRFFPLRHIHIVDGDRLIRDPFPEIQKVERFLK 236 G + + L ++ +Q L F + +++ D P + ++ + Sbjct: 1 GSASAQSRTLAGGIHATDLNDKSVQRALDFAISEYNKVINKDEYYSRPLQVMAAYQQIVG 60 Query: 237 LSPQINASNFYFNKTKG 253 N+YFN G Sbjct: 61 ------GVNYYFNVKFG 71 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.311 0.134 0.366 Lambda K H 0.267 0.0412 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 12,547,103 Number of Sequences: 36641 Number of extensions: 509351 Number of successful extensions: 1448 Number of sequences better than 10.0: 38 Number of HSP's better than 10.0 without gapping: 30 Number of HSP's successfully gapped in prelim test: 27 Number of HSP's that attempted gapping in prelim test: 1387 Number of HSP's gapped (non-prelim): 58 length of query: 307 length of database: 10,336,785 effective HSP length: 97 effective length of query: 210 effective length of database: 6,782,608 effective search space: 1424347680 effective search space used: 1424347680 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.3 bits) S2: 59 (27.3 bits)